mRNA_P-littoralis_Contig130.19.3 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig130.19.3 vs. uniprot
Match: A0A6H5J6H7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J6H7_9PHAE) HSP 1 Score: 490 bits (1261), Expect = 3.310e-138 Identity = 720/1758 (40.96%), Postives = 860/1758 (48.92%), Query Frame = 2
Query: 569 VVVGCQPLAGESMRWIKDTVAGLANPHDAAAKNRVAKMEKYILQGGDVNKPNKLGDTPLHEACAYIRDNGDSSKGKQRKT--VRKDRRKVGKRLSHPQVREGGAFEMLELLLNAGSNIDAQNIVGDAPLHKAALNGRALSAEYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRHQYEGIVIYLMGLVNNPETSQGLKLWQGLDPSWEKMLRSRAQARAE-GAEEQDEMPAKVTTXXXXXXXXXXXXXXDLHSVRPGMHTPSTTHNSLRSSESAMGLGLSNRTPVGRARSSVNGGGRDRN--------------------GVAVSAKDSDRERKKTVASPSGLQAHGGQGIRGTRKR----GLQSSGAGAGLNS-DGADLNGNGTGTYPGSTIRRRRRDRTEDRPPVQGSKPPTFSTGPADVLDWQATKAKSVQQERLIDKAREALREEQHDASMASSPN--THGDDDGSIDTANTADTPTTPGIRHSRPREQHTRGGSRDPATAGAATGEVVSDLESDGHAGSGRVMG---------------APSMYK----------------------TPGPASDNTRTMTSPATSTALRTQLNGD--GRIPRREGNRRQSARKGKSQVVALRSPVARLQRSSGGDSSKAGNVERSSXXXXXXXSRRTGGIHVSSDRWPEVAGSVEGGGDAARSRRSRXXXXXXXXXXXXXXXSEAEDHGQGSPWRGALEEPARPRQRSSRRRDEGVPRESNGDVGGGQGRSALSSRRERHRQLEGDAAAXXXXXXXXXXXXXXXXXXXXXHRSPRGEAXXXXXXXXXXXXXXXXXXXXXXXXXXXSGRGVNGEFKHSESK----RSPRSISSHXXXXXXXXXXXXXXXXXSSSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALEAATEASQRGQREAPAIVAKALKAPHRARTPRESDKLSAHFSMSHGSPAAKTSREGLRPSNLRDAAGERKVYG----GGQPLAMPSNPRSHDRDLCSPTWAANVTGMSGLEEASRKRVIAHDLPVRRV-SPYSTKKKEMLRDTDAPEQEKLXXXXXXXXXXXXXXXXXKQFFPSPSADAPAPRRQ--PAASSRPPSKAID-----------VPEDSSSSSGPLEALADSRDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQKSPTGGLSPASRAEDDVPPSIDALTMGVTAASGAALSEEGGCAVPAEGALVHGGNSKDQGGMAAPKGKQADAAPTPESHVYKETGKVRAGAATTEGEGTAKDESGEVATPMSLTGRDARMIFKTKAMVLEKSKSLLFSDSDSDDNESSSEEGPGASRKASPTLGG-AQSIAAPTAVS-----KASLNDTAKESALGNAQVEA-----------AMXXXXXXXXPSAGVASSEVSRADEEEQTPSPPARNSAVAAAADSKTLPADTAVSARPSAATPAGAPTVKAAT-----APVAAENDGAIIERSAAPWVSAQHPPSMATLAGSRTSLPAKTAAAGVGGVRRRPLTLGRPGMPPAKVTMPIAGGRAAWNKFLATTNEPEASTAAPSSLAVDGQDDKAGESAEGGDXXXXXXXELGEDTAAAAAT---AEKLAARGPRGFKNAADAQEGPNKGPAGAFSGNAMWRLAAGASSPGNRARSGVAANGHGGYSNPLAAMRAGG-GTGATSXXXXXXGILGGDAMVNPLAGLRGAA 5491
+VVGCQPLAGESMRW+K TV+GLANPHDAAAKNR+AKMEKY+ QGGDVNKPNKLGDTPLHEACAYIRDNGDSSKGK+RK V KDRRKVGK+L+ Q+ EGG EMLELLL AGSNI+AQNIVGDAPLHKAALNGRALSA+YXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRHQY+GI IYLMGLVNNPETSQ LKLW+GLDPSWEKMLRSRAQAR E G EE P ++T L SVR G+ TPSTTHNSL SSESAMG+G+SNRTP R S +G RDR G A S K +++ S Q G + T R G S AGAG++S DGA ++G D PP + S P FS G ADVL WQATK KS +Q RLI+KAREALRE +++A +A S + + GDD+ SIDT NTAD+PTT G SRP E+ R + PA A T EV D+++DG+ S RV PS A D+ SP T R + D G PRRE RRQSAR K +VV++RSPVAR+ R G KA +V+ SS RR R XXXXXXX ++++ A ARPR R +EGV R NG+ + XXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXX G H+ + ++P S XXXXXXXXXXXX V KA H +R+ H G ++ ER+ GG+ A R +LC PTWA+NV S LE+ SRKRV+A D P RRV PY++ K+ + SP+ + RR P +SRP K ID V S +SS P E + DS + G PA+ + VP ++ A + AA AV E +V ++ A +G A E + AA + E ++E + A + T + R F +E SKS++FSDSDS+ + SS S SPT GG Q +AA +AVS + S + + + LGN Q ++ A+ P A V+ SE + + + T + ++ + L A TA +A + PAG A AP E G + E S AP + P S +TL + L R R LGRPGMP KVTMPIAGGRAAWNKFLATT + E+ +A ++ G+ +K G XXXXXXX A AA + A LAA+G RGF N A +QEGPNKGPAGAFSGN+MWRLA G ++ RARSGVAANGHGGYSNPLAAMRA G G XXXXXX G NPLAGLRGAA
Sbjct: 1 MVVGCQPLAGESMRWLKHTVSGLANPHDAAAKNRLAKMEKYVQQGGDVNKPNKLGDTPLHEACAYIRDNGDSSKGKRRKGKGVGKDRRKVGKKLTRRQMGEGGPLEMLELLLRAGSNINAQNIVGDAPLHKAALNGRALSADYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRHQYKGIAIYLMGLVNNPETSQELKLWEGLDPSWEKMLRSRAQARVEDGTEEDVGRPRDMSTAAAAAG---------LSSVRLGVTTPSTTHNSLMSSESAMGIGVSNRTPARRDVFSTSGN-RDRGXXXXXXXXXXXXXXXXXPPRGQAASTKGXXXX-XXXMSAQSAAQVQPGVHHQRTTTRNRGSGSASPAAGAGMSSSDGARVDGE------------------RDEPPGETS-PRVFSNGAADVLAWQATKVKSAKQGRLIEKAREALRETEYEAELARSRSMTSLGDDEASIDTCNTADSPTTVGSHSSRPGERRQRR-AISPAAKPAETLEVF-DVDADGNPQSRRVYANANANAAADLSDAESQPSREXXXXXXXXXXXXXXXXXXXXXXVADATADDSRGRAVSPVMPTPPRAEGRDDVDGHAPRRESGRRQSARLAKGKVVSVRSPVARVSRRPSGFP-KADDVDGSS--------RRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRSXXXXXXXRGPGDHGQSDNXXXXXXXXSATAAAARPR----RFEEEGV-RAENGEXXXXXXXXXXXXXXXXXXXXXPEVDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSQREGSDGHASTAVPTTQAPAPASXXXXXXXXXXXXXX--------------------------------------------------------------XVTSVPKASHESRS---------HSGAREGRASSSXXXXXXXXXXXXXXXXERRTPAISSPGGRLYATAPRQRPSSPNLCPPTWASNVPS-STLEDPSRKRVVASDFPARRVVGPYNSSKR-----------------------GPPAGGRRTRSSASPTRSSSPGRRSALPPPASRPVEKEIDPQGEDAEREAAVSASSHASSFPTETVGDS-------------------------------------------------VSLPEAATVAGEAKPAATFKSAVPEAVSARKTWEAKPTAAANCVATAAAV--EDGVVQESPARSSAASAESEGPPLIGALLMEKKAATDGDST---AARADKEEELREEREDRAPCTTSTKSNPRRSFTA----IETSKSIVFSDSDSEVDNDSSTRASNESPNQSPTSGGDVQPMAALSAVSTVFARQRSGDKKGETAVLGNKQADSSSSVSGAVSAEALDSDRKADGPVASVSRSEEAASGDRGGTATTASKEDRQGLPSYQDALAAGTAAAAAAAVPRPAGPGAGPEAVDDRGAAPAEVEGRGTV-EPSPAPQ-NYLRPLSSSTLPSTMAVLAGXXXXXXXXXXRPRSSALGRPGMPSVKVTMPIAGGRAAWNKFLATTAQGESEESAAAADGDGGRAEKEGXXXXXXXXXXXXXXXPKASNAVAAGSGNHAATLAAKGLRGFTNPAQSQEGPNKGPAGAFSGNSMWRLAGGTAAETGRARSGVAANGHGGYSNPLAAMRAAGSGXXXXXXXXXXXXXXXGS---NPLAGLRGAA 1554
BLAST of mRNA_P-littoralis_Contig130.19.3 vs. uniprot
Match: D8LC53_ECTSI (Ankyrin domain protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC53_ECTSI) HSP 1 Score: 309 bits (792), Expect = 5.440e-81 Identity = 311/565 (55.04%), Postives = 352/565 (62.30%), Query Frame = 2
Query: 878 EMLELLLNAGSNIDAQNIVGDAPLHKAALNGRALSAEYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRHQYEGIVIYLMGLVNNPETSQGLKLWQGLDPSWEKMLRSRAQARAE-GAEEQDEMPAKVTTXXXXXXXXXXXXXXDLHSVRPGMHTPSTTHNSLRSSESAMGLGLSNRTPVGRARSSVNGGGRDRNGVAVSAKDSDRERK-------------------KTVASPSGLQAHGGQGIRGT--RKRGLQSSGAGAGL---NSDGADLNGNGTGTYPGSTIRRRRRDRTEDRPPVQGSKPPTFSTGPADVLDWQATKAKSVQQERLIDKAREALREEQHDASMASSPN--THGDDDGSIDTANTADTPTTPGIRHSRPREQHTRGGSRDPATAGAATGEVVSDLESDGHAGSGRVMGAPSM--------------------YKTPGP--------------ASDNTRTMTSPATSTALRTQLNGD--GRIPRREGNRRQSARKGKSQVVALRSPVARLQRSSGGDSSKAGNVE 2383
+MLELLL AGSNI+AQNIVGDAPLHKAALNGRALSA+YXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRHQYEGIV+YLMGLVNNPETSQGLKLW+GLDPSWEKMLRSRAQAR E G EE P +++T L SVR G+ TPSTT NSLRSSESAMGLG+SNRTP R S +G RDR G RERK K +++PS Q G + T R RG S+ AG +SDGA ++G +G+ P S RRRRR R D PP + S P FS G ADVL WQATK KS +Q RLI+KAREALRE +H+A MA S + + GDD+GSIDT NTAD+PTT G R SR E+ R + PA A T EV SDL++DG+ S RV S T G A D SP T R + D G P RE RRQSAR K QVV++RSPVAR+ R G S KA +V+
Sbjct: 24 QMLELLLRAGSNINAQNIVGDAPLHKAALNGRALSADYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRHQYEGIVVYLMGLVNNPETSQGLKLWEGLDPSWEKMLRSRAQARVEDGTEEDVGKPQEMSTAAAAAG---------LSSVRLGVTTPSTTRNSLRSSESAMGLGVSNRTPARRDVFSTSGS-RDRGGXXXXXXXXTRERKMMMPPRGETASTKGSTKERKIMSAPSAAQVQPGVHHQRTTARNRGSDSAAPAAGTAMSSSDGARVDGTRSGSRPSSATRRRRRSREGDAPPGETS-PRVFSNGAADVLAWQATKVKSAKQGRLIEKAREALRETEHEAEMARSRSMTSLGDDEGSIDTCNTADSPTTVGSRSSRRGERRQRR-AISPAAKPAETLEV-SDLDADGNPQSRRVNANASAAADLSDAESQPSRGSRRVKPVATNGTGGXXXXXXXXXXXXADDARGRAVSPVMPTPPRAEGRDDVNGHAPPRESGRRQSARLAKGQVVSVRSPVARVSRRPSGFS-KADDVD 574 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig130.19.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig130.19.3 >prot_P-littoralis_Contig130.19.3 ID=prot_P-littoralis_Contig130.19.3|Name=mRNA_P-littoralis_Contig130.19.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=1974bp MVVVGCQPLAGESMRWIKDTVAGLANPHDAAAKNRVAKMEKYILQGGDVNback to top mRNA from alignment at P-littoralis_Contig130:109612..128432+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig130.19.3 ID=mRNA_P-littoralis_Contig130.19.3|Name=mRNA_P-littoralis_Contig130.19.3|organism=Pylaiella littoralis U1_48|type=mRNA|length=18821bp|location=Sequence derived from alignment at P-littoralis_Contig130:109612..128432+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig130:109612..128432+ >mRNA_P-littoralis_Contig130.19.3 ID=mRNA_P-littoralis_Contig130.19.3|Name=mRNA_P-littoralis_Contig130.19.3|organism=Pylaiella littoralis U1_48|type=CDS|length=5922bp|location=Sequence derived from alignment at P-littoralis_Contig130:109612..128432+ (Pylaiella littoralis U1_48)back to top |