mRNA_P-littoralis_Contig130.17.1 (mRNA) Pylaiella littoralis U1_48
|
Overview
Homology
BLAST of mRNA_P-littoralis_Contig130.17.1 vs. uniprot
Match: D8LC52_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LC52_ECTSI) HSP 1 Score: 461 bits (1187), Expect = 1.980e-146 Identity = 323/597 (54.10%), Postives = 380/597 (63.65%), Query Frame = 3
Query: 444 AYSTGVRSTITETGVIMKFSTMAAASGGLCLVVAVFSGPALIALAVLTLGVCGICYGIRKQGAIKYLPSGVVELLTRTTLLEFLTDTSVFDAVKTYLVFMMGLSEDETQGVLRSLPEDMRHTLTRPGMMHTLPGPLQDLLLSSNPAPATARLLTAEYGQEVSGSRRRRRPAGREG-SDHGGAGDAGPRAIERARGR----YEADEEREAPPLGQLVWTPLPAXXXXXXXXXXXXXXXXQAFVEEDDPAAPSESSVFSDEED--------SEILDSEEXXXXXEAGQGERGRGRARSTNRAGGGVVGEANGVARRRLW-AESPPRAGARSLSPGATPYRTRSRAATDGVELDGERVQL---SALPERTSRQGVAGWFGGVIGARASGAAN------STAA---PSAERLVASILQRRVDSAMRAAWDAVDERGVRRAAVGSGIALAAHMAFSERARRQAGSMLRGGLLAALAGTATVCAGLAYLKPGEAARGQTSSNATRDSDPDEQVGTEEETGADAA--SADEAASREGTEDTLSRVRRCRAGVERWLAVVTPNTRNMVRLLGLICLLLAVRKWQLLRRAALRAMRPRSLYGFTPP 2150
AYS GVR +T ++M+FS++A ASGG+CLVV+VFSG AL+ LAV+ +GVCG+CY +R++GA++YLPSGV ELLTRTTLLEFLTDTSVFDA+KTYLVFMMGLSEDETQGVL SLPEDM++TLTRPG+MHTLP P QDLLL N L+ A G+EV G RRR R +G ++ GGA + EE AP LGQLVW PLPA Q ++ E VF EE+ S +DSEE + + G GRAR R G G + RRR W AE+ P +RSLSP A R+RAATD E DG R SALP R G AGWFG A+G+ N +TA PSAERLVASILQRRVD A+R AW+AVDE+GVRRAA+GSGIALAAH+AFSERARRQAGSMLRG LLAALAGTATVCA LAYLKPGE R +T+S E GAD S + RE +DTLSR+R R G++RW+ V+P TRNMV LL +ICLLLAVRKWQLLRRAA RAM PR++YG T P
Sbjct: 84 AYSNGVRF-MTAPAIVMQFSSLAVASGGMCLVVSVFSGSALVFLAVIAIGVCGMCYSVRQRGALEYLPSGVTELLTRTTLLEFLTDTSVFDAIKTYLVFMMGLSEDETQGVLASLPEDMQYTLTRPGIMHTLPRPFQDLLLPPNARAGV--LIGAPDGREVIGPRRRHRGVETQGLAEAGGAXXXXXXXXXXXXXXXXXXHRDGEEGGAPVLGQLVWNPLPASLG-------------QETTNGEEQEGEGEEHVFPQEEELDRAGGDASSSVDSEEERGRSASRHADDG-GRAR---RNGVDDDGRDDNATRRRPWEAEAYPPHASRSLSPAAV----RNRAATDVAEADGARSSRRVSSALPIPARRLGTAGWFGRT---HANGSGNPPGPAATTAGGMVPSAERLVASILQRRVDGAVRTAWNAVDEQGVRRAALGSGIALAAHVAFSERARRQAGSMLRGSLLAALAGTATVCASLAYLKPGEGGRERTASXXXXXXXXXXXXXXXXEPGADVVDPSPTQGPRRERGQDTLSRIRGFRDGLQRWMTGVSPTTRNMVHLLSMICLLLAVRKWQLLRRAARRAMMPRTMYGATLP 653
BLAST of mRNA_P-littoralis_Contig130.17.1 vs. uniprot
Match: A0A1V9YKG7_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YKG7_9STRA) HSP 1 Score: 85.9 bits (211), Expect = 9.920e-14 Identity = 51/121 (42.15%), Postives = 74/121 (61.16%), Query Frame = 3
Query: 549 FSGPALIALAVLTLGVCGICYG------------IRKQGAIKYLPSGVVELLTRTTLLEFLTDTSVFDAVKTYLVFMMGLSEDETQGVLRSLPEDMRHTLTRPGMMHTLPGPLQDLLLSSN 875
F+ LIAL + G G+CY + ++G I +LP G+ LL RTTLLE+LTDTS F++++ YL F+M LS E Q V+RSLP + + L +PG+++ LP +QD LL S+
Sbjct: 133 FTRRILIALVLFGYGAWGLCYAWTVPLWRWYMYDMCERGLIAHLPEGLQTLLLRTTLLEWLTDTSFFESMQKYLPFLMPLSAPEQQRVVRSLPSESQAMLVKPGLINLLPDVVQDALLPSD 253
BLAST of mRNA_P-littoralis_Contig130.17.1 vs. uniprot
Match: A0A7S1XZ18_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XZ18_9STRA) HSP 1 Score: 79.7 bits (195), Expect = 1.290e-11 Identity = 42/118 (35.59%), Postives = 72/118 (61.02%), Query Frame = 3
Query: 591 GVCGICYGIRKQGAIKYLPSGVVELLTRTTLLEFLTDTSVFDAVKTYLVFMMGLSEDETQGVLRSLPEDMRHTLTRPGMMHTLPGPLQDLLLSSNPAP-------ATARLLTAEYGQE 923
G G+ +R++G ++ +P V ++ ++LLE+LTD S F+A++ Y +F++GL+E+ET+ L +LP +++ TL RPG++H LP +Q LL P A AR+ A +E
Sbjct: 88 GAAGMVLHVRQRGLLELIPERVRTVMLTSSLLEWLTDFSFFNALRPYAIFLLGLNEEETEYALNALPVEVQTTLMRPGVVHLLPDSMQRALLPQPPVSLEIDIGGALARIFGARSSEE 205
BLAST of mRNA_P-littoralis_Contig130.17.1 vs. uniprot
Match: A0A7R9UDT0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UDT0_9STRA) HSP 1 Score: 76.3 bits (186), Expect = 6.230e-11 Identity = 47/143 (32.87%), Postives = 81/143 (56.64%), Query Frame = 3
Query: 462 RSTITETGVIMKFST-MAAASGGLCLVVAVFSGPALIALAV---LTLGVCGICYGIRKQGAIKYLPSGVVELLTRTTLLEFLTDTSVFDAVKTYLVFMMGLSEDETQGVLRSLPEDMRHTLTRPGMMHTLPGPLQDLLLSSNP 878
R + E+ ++ +S + ASGG V + G AL LA+ G+ G+ +R++G + +P + + TLL +LTD ++ A++ Y +F++GLSE+ET L+ +P +++TL RPG++H LP Q+ LL P
Sbjct: 29 RRVVLESESLLHWSAALLVASGGYLAVRYIPPGVALCILALALSFAFGILGLALRVRQRGLLTLVPETLRTMALHDTLLAWLTDVAILRALQPYAIFLLGLSEEETDLALQEMPVHVQNTLLRPGLLHLLPRAWQEALLPQPP 171
BLAST of mRNA_P-littoralis_Contig130.17.1 vs. uniprot
Match: K3WUF6_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WUF6_GLOUD) HSP 1 Score: 69.7 bits (169), Expect = 1.680e-8 Identity = 36/86 (41.86%), Postives = 56/86 (65.12%), Query Frame = 3
Query: 624 QGAIKYLPSGVVELLTRTTLLEFLTDTSVFDAVKTYLVFMMGLSEDETQGVLRSLPEDMRHTLTRPGMMHTLPGPLQDLLLSSNPA 881
+G I +LP V ELL RT+LLE++TDT++ D ++ +L F++ LS E +L +P + + LTRPG++ LP +Q LL S P+
Sbjct: 204 KGLIAFLPESVQELLLRTSLLEWMTDTTMSDKIQPFLPFLLPLSRAEQTRLLERMPVENQLVLTRPGLLPLLPESVQKALLPSEPS 289
BLAST of mRNA_P-littoralis_Contig130.17.1 vs. uniprot
Match: A0A2D4CHS9_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CHS9_PYTIN) HSP 1 Score: 70.1 bits (170), Expect = 1.800e-8 Identity = 40/94 (42.55%), Postives = 57/94 (60.64%), Query Frame = 3
Query: 624 QGAIKYLPSGVVELLTRTTLLEFLTDTSVFDAVKTYLVFMMGLSEDETQGVLRSLPEDMRHTLTRPGMMHTLPGPLQDLLLSSNPAPATARLLT 905
+G + LP V LL RTTLLE+LTDT+ D ++ +L F++ LS+ E VL LP + + LTRPGM+ LP +Q +LL ++ A LT
Sbjct: 416 KGLVTLLPESVQHLLLRTTLLEWLTDTTFMDKLRPFLPFLLPLSKAEQNRVLEQLPVETQLMLTRPGMVTLLPDGVQRVLLPASTTEAKVSELT 509
BLAST of mRNA_P-littoralis_Contig130.17.1 vs. uniprot
Match: A0A5D6XP04_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XP04_9STRA) HSP 1 Score: 68.9 bits (167), Expect = 2.820e-8 Identity = 47/151 (31.13%), Postives = 83/151 (54.97%), Query Frame = 3
Query: 453 TGVRSTITETGVIMKFSTMAAASGGLCLVVAVF-SGPALIALAVLTLGVCGICYG------------IRKQGAIKYLPSGVVELLTRTTLLEFLTDTSVFDAVKTYLVFMMGLSEDETQGVLRSLPEDMRHTLTRPGMMHTLPGPLQDLLL 866
+GV S + ++++ + L +++A F S +IAL L G G+ Y ++G + +LP+ + +LL RT+LLE+LTD+S+ + V+ +L F++ LS E +L +P + + TLTRPG++ LP +Q +LL
Sbjct: 110 SGVASRVELALLLLRVACCLTVCASLTVILAEFLSRRVMIALLALAYGALGLAYSWSVPLWRWYLDEASRKGLVAFLPAPLQQLLLRTSLLEWLTDSSMSERVQPFLPFLLPLSRAEQTRLLERMPVESQLTLTRPGLLPLLPESVQRVLL 260
BLAST of mRNA_P-littoralis_Contig130.17.1 vs. uniprot
Match: A0A2D4BM40_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BM40_PYTIN) HSP 1 Score: 68.6 bits (166), Expect = 5.470e-8 Identity = 37/84 (44.05%), Postives = 54/84 (64.29%), Query Frame = 3
Query: 624 QGAIKYLPSGVVELLTRTTLLEFLTDTSVFDAVKTYLVFMMGLSEDETQGVLRSLPEDMRHTLTRPGMMHTLPGPLQDLLLSSN 875
+G + LP V LL RTTLLE+LTDT+ D ++ +L F++ LS+ E VL LP + + LTRPGM+ LP +Q +LL ++
Sbjct: 405 KGLVTLLPESVQHLLLRTTLLEWLTDTTFMDKLRPFLPFLLPLSKAEQNRVLEQLPVETQLMLTRPGMVTLLPDGVQRVLLPAS 488
BLAST of mRNA_P-littoralis_Contig130.17.1 vs. uniprot
Match: F0WGE4_9STRA (Uncharacterized protein AlNc14C91G5676 n=2 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WGE4_9STRA) HSP 1 Score: 65.9 bits (159), Expect = 1.090e-7 Identity = 33/82 (40.24%), Postives = 54/82 (65.85%), Query Frame = 3
Query: 621 KQGAIKYLPSGVVELLTRTTLLEFLTDTSVFDAVKTYLVFMMGLSEDETQGVLRSLPEDMRHTLTRPGMMHTLPGPLQDLLL 866
K+G I YLP + LL R +L+E+L+D ++F+++K + F++ L+E E + VLR LP+ + + RPGM++ P LQ LL
Sbjct: 29 KKGLIGYLPDSLQHLLLRCSLIEWLSDRTLFESMKALVPFVLPLTESEQKIVLRQLPKSTQRIMCRPGMINFFPTQLQKALL 110
BLAST of mRNA_P-littoralis_Contig130.17.1 vs. uniprot
Match: D0MXH0_PHYIT (Uncharacterized protein n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0MXH0_PHYIT) HSP 1 Score: 64.3 bits (155), Expect = 7.660e-7 Identity = 31/84 (36.90%), Postives = 54/84 (64.29%), Query Frame = 3
Query: 615 IRKQGAIKYLPSGVVELLTRTTLLEFLTDTSVFDAVKTYLVFMMGLSEDETQGVLRSLPEDMRHTLTRPGMMHTLPGPLQDLLL 866
+ +G + +LP + ELL RT+LLE+LTDTS D V +L F++ L+ E ++ +P + + +T+PG++ LP +Q++LL
Sbjct: 161 MHTRGLVGFLPDSMQELLLRTSLLEWLTDTSFSDKVAPFLPFLLPLTRAEQMKLMEQMPPESQVMMTKPGLLPLLPDSVQNVLL 244 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig130.17.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig130.17.1 >prot_P-littoralis_Contig130.17.1 ID=prot_P-littoralis_Contig130.17.1|Name=mRNA_P-littoralis_Contig130.17.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=675bp MEKMGDVSFRLEENVAASEASTLPSTPQQPSPVASASATAIAAPAPAPAPback to top mRNA from alignment at P-littoralis_Contig130:100313..109522- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig130.17.1 ID=mRNA_P-littoralis_Contig130.17.1|Name=mRNA_P-littoralis_Contig130.17.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=9210bp|location=Sequence derived from alignment at P-littoralis_Contig130:100313..109522- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig130:100313..109522- >mRNA_P-littoralis_Contig130.17.1 ID=mRNA_P-littoralis_Contig130.17.1|Name=mRNA_P-littoralis_Contig130.17.1|organism=Pylaiella littoralis U1_48|type=CDS|length=2025bp|location=Sequence derived from alignment at P-littoralis_Contig130:100313..109522- (Pylaiella littoralis U1_48)back to top |