prot_P-littoralis_Contig130.12.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig130.12.1
Unique Nameprot_P-littoralis_Contig130.12.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length588
Homology
BLAST of mRNA_P-littoralis_Contig130.12.1 vs. uniprot
Match: D8LC49_ECTSI (TPR Domain containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LC49_ECTSI)

HSP 1 Score: 524 bits (1349), Expect = 1.680e-177
Identity = 340/593 (57.34%), Postives = 397/593 (66.95%), Query Frame = 0
Query:    9 VDYSEDSVDKDIWDLKKEGKDEDAILAAEESLHRVVVSYGPSSEETRRVATDLVLAYNHLSMKRLAENNIKGSLCLLQKAKLLTSRDQSFLGDARLQARALTLNNLGCLMKKWGKVREGVKFLARAIRIEGEVPGGADNPAGTHVNMSAALSTLGLHRAAAVHAGHAIDLASQAIMGQAAG-SLVPSGEDSVTAGGGHVGAAGPGLVEEGGST--SVDATIADDAVGSSCSTRGNDCRTAVIGGAPESSSDAPPLLRGSADGGTIDSAA-ADNGRSSATFSSSPPSTQDANLGIPDQEKKGVRIRAPTNSAADDRRISPGSVNTSVTEDTSSLERREVLAAAAGGLLAIAHFNLGVEREHLGQLEAALSSYEDARVAADQHLGPESPVAKGIGVALEKASAAAVATASYSSKRAAWRSRSAVSSFPSIGKLQFGQRTPDGVSSFGGRRVSPRRLRHEQQYGEE-----TARDLLDRAYSCARPCPAPPRTDSWSRLGRTLSPRSPQTAPGSESVGGPQRAGRWMTSDAPAARPMRTQGSAARG--EGPSRPCSVDEDLRWRALACKKWQCSPREALHAQQ--AANRRVDVGVA 588
            +  + + +   I  L+K G D  A++AAEESL R V S+GPSSEETR VA DLVLAYNHL+MKRL+ENNIK S+ LLQKA LLTSR Q FLG ARLQARALTLNN GCLMK WGK RE VKFLARA+RIE +VPGGADNPAGTHVNMSAALST+GLHR AA+HAGHAIDLASQA+M Q AG S V   ED  TA G       P  ++E G+   SV  T AD          GN   +  + G  ESSS   P ++G  DG T+ S+A AD+GR+ +  +SS  S   A+  +P+  KK       T                SV  DTSS++R++   +AAGGLLAIA FNLGVEREHLGQL+AA++SY+ AR AADQHLGPESPVAKGI  ALEKASAAA   ASYS KRAA RSR AVSSFP IGKL+FGQ+     S F G  +SPR  R +QQ+GEE     TARDLL+ AY+  RPCPAPP   SW+RLG   +PRS    P   +  GPQRAGRW + D PAAR M+     + G   G  +   VD DLRWRALAC +WQCSPREALHAQ+  A    VDVGVA
Sbjct:   12 ISETSEEIRSRILSLRKGGNDHGAVVAAEESLTRSVDSHGPSSEETREVAADLVLAYNHLAMKRLSENNIKASVRLLQKASLLTSRGQPFLGKARLQARALTLNNFGCLMKNWGKPRESVKFLARALRIEAKVPGGADNPAGTHVNMSAALSTIGLHREAAMHAGHAIDLASQAMMEQEAGFSYV---EDPNTASGD------PADMDEDGAAVASVHLTSADSGTKGGVGDSGNSVPSVGVTGCLESSSVPRPEVQGE-DGETVSSSAVADDGRTCSPEASS--SVHHADHDVPEGGKKANPAENGTEGHGGXXXXESAGDEKSVQGDTSSVDRQDGPPSAAGGLLAIACFNLGVEREHLGQLDAAIASYKYARSAADQHLGPESPVAKGIETALEKASAAAATAASYSRKRAASRSRVAVSSFPCIGKLKFGQKNSQVPSRFDGVGLSPR-CRSQQQHGEEVVGEATARDLLEHAYTSPRPCPAPPHKGSWARLGHVPTPRS--APPARSASRGPQRAGRWTSVDTPAARAMKEAQRRSEGWRNGGRKRGDVDGDLRWRALACAEWQCSPREALHAQRQVAEQHGVDVGVA 589          
BLAST of mRNA_P-littoralis_Contig130.12.1 vs. uniprot
Match: A0A7S1H3R9_HEMAN (Hypothetical protein n=6 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1H3R9_HEMAN)

HSP 1 Score: 88.6 bits (218), Expect = 1.580e-14
Identity = 60/169 (35.50%), Postives = 92/169 (54.44%), Query Frame = 0
Query:   17 DKDIWDLKKEGKDEDAILAAEESLHRVVVSYGPSSEETRRVATDLVLAYNHLSMKRLAENNIKGSLCLLQKAKLLTSRDQSFLGDA--RLQARALTLNNLGCLMKKWGKVREGVKFLARAIRIEGEVPGGADNPAGTHVNMSAALSTLGLHRAAAVHAGHAIDLASQAI 183
            D+   +L++EG+  +A+   E  L       G    E  +     + + N  +M  L   ++  S  LL+KA+++T   +  + D   RL+ RA+TLNNLGC M++ GK+   +++L +A+RIE  V    DNPAGTH+NM A LS L  H AA  HA  A+ L   A+
Sbjct:   18 DRKHEELRREGRTVEALTELERGLFLRREVLGDKHAEVEKCCCAFISSTNSTAMTALQAGDMLLSFELLKKAEIVTE-PRGLIRDTMTRLKMRAITLNNLGCFMRRRGKLHSALQYLDKALRIELTVKT-VDNPAGTHLNMCAVLSQLNRHAAALQHAQCALQLLEDAV 184          
BLAST of mRNA_P-littoralis_Contig130.12.1 vs. uniprot
Match: A0A7S1SZ57_9CHLO (Hypothetical protein (Fragment) n=2 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1SZ57_9CHLO)

HSP 1 Score: 75.5 bits (184), Expect = 6.210e-13
Identity = 43/106 (40.57%), Postives = 64/106 (60.38%), Query Frame = 0
Query:   65 YNHLSMKRLAENNIKGSLCLLQKAKLLTSRDQSFLG--DARLQARALTLNNLGCLMKKWGKVREGVKFLARAIRIEGEVPGGA-DNPAGTHVNMSAALSTLGLHRA 167
            YN L ++ L       S  + +KA++LT+   S     +AR++ RA+T NNLGC  K+ GK+   + +L R ++IE     GA +NPA TH+N++A LSTLG H A
Sbjct:    3 YNVLGLRLLEAEQFDASYEMFKKAEMLTAPGSSLAEKPEARMRLRAITFNNLGCYYKQRGKLHAALHYLERTVKIEEAADIGAVENPASTHLNIAATLSTLGRHSA 108          
BLAST of mRNA_P-littoralis_Contig130.12.1 vs. uniprot
Match: A0A7S0HFD1_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0HFD1_9CRYP)

HSP 1 Score: 74.3 bits (181), Expect = 1.290e-10
Identity = 57/172 (33.14%), Postives = 90/172 (52.33%), Query Frame = 0
Query:   25 KEGKDEDAILAAEESLHRVVVSYGPSSEETRRVATDLVLAYNHLSMKRLAENNIKGSLCLLQKAKLLTSRDQSFLGDARLQAR--ALTLNNLGCLMKKWGKVREGVKFLARAIRIEGEVPGGADNPAGTHVNMSAALSTLGLHRAAAVHAGHAIDLASQAIMGQAAGSLVPS 194
            ++GK+  A+L  E +      + G    + +R    LV++YN L M  +    ++ +  LL+KA+ +   ++S L D  L+ R  A+T NNLGC  +  G +   +K L +A+ IE      +DNPA TH+N+SA LS L  H AA  H   A+ L  +A+  Q   S + S
Sbjct:    3 EQGKNLQALLLLERTSLLRREALGIDHPDVQRSLQVLVMSYNGLGMAAIRAGGMEVAWELLRKAERVAG-ERSLLKDKELKNRLLAITYNNLGCFYRTRGNLHSALKALDKALWIEMSCDE-SDNPAATHLNISAVLSKLSKHHAALEHINCALQLLDKAMKNQKRSSSLKS 172          
BLAST of mRNA_P-littoralis_Contig130.12.1 vs. uniprot
Match: G0UVA9_TRYCI (Uncharacterized protein (Fragment) n=1 Tax=Trypanosoma congolense (strain IL3000) TaxID=1068625 RepID=G0UVA9_TRYCI)

HSP 1 Score: 57.8 bits (138), Expect = 6.150e-5
Identity = 42/145 (28.97%), Postives = 72/145 (49.66%), Query Frame = 0
Query:   58 ATDLVLAYNHLSMKRLAENNIKGSLCLLQKAKLLT----SRDQSFLGDA---RLQARALTLNNLGCLMKKWGKVREGVKFLARAIRIEGEVPGGADNPAGTHVNMSAALSTLGLHRAAAVHAGHAIDLASQAIMGQAAGSLVPSG 195
            A D+VL  N+ ++    E     +   L KA  LT    + + ++  DA   R++ RA TLNNLGC+ K+ G++ E +K L +A+ +E  +   A     T++N+   L+ L  H  A +    A+    + ++ Q     +PSG
Sbjct:  101 AADIVLRCNNNAVNAFNEKCFDVAEFFLAKALFLTDSRAAEELNYFPDAESRRIRLRAATLNNLGCMEKRRGRLEESLKHLRQAVELEVALDRSAGGSPSTYLNLCTVLNELQRHDEAVIAVESALAALDEQMLRQQRKQQLPSG 245          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig130.12.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D8LC49_ECTSI1.680e-17757.34TPR Domain containing protein n=2 Tax=Ectocarpus T... [more]
A0A7S1H3R9_HEMAN1.580e-1435.50Hypothetical protein n=6 Tax=Hemiselmis andersenii... [more]
A0A7S1SZ57_9CHLO6.210e-1340.57Hypothetical protein (Fragment) n=2 Tax=Tetraselmi... [more]
A0A7S0HFD1_9CRYP1.290e-1033.14Hypothetical protein n=1 Tax=Hanusia phi TaxID=303... [more]
G0UVA9_TRYCI6.150e-528.97Uncharacterized protein (Fragment) n=1 Tax=Trypano... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 108..141
e-value: 30.0
score: 10.7
coord: 352..385
e-value: 1.0
score: 18.4
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 15..189
e-value: 3.5E-7
score: 31.5
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 108..379
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 195..225
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 488..547
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 493..512
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 246..330
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 274..297

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig130contigP-littoralis_Contig130:55794..57841 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig130.12.1mRNA_P-littoralis_Contig130.12.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig130 55794..57841 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig130.12.1 ID=prot_P-littoralis_Contig130.12.1|Name=mRNA_P-littoralis_Contig130.12.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=588bp
MEARSRLGVDYSEDSVDKDIWDLKKEGKDEDAILAAEESLHRVVVSYGPS
SEETRRVATDLVLAYNHLSMKRLAENNIKGSLCLLQKAKLLTSRDQSFLG
DARLQARALTLNNLGCLMKKWGKVREGVKFLARAIRIEGEVPGGADNPAG
THVNMSAALSTLGLHRAAAVHAGHAIDLASQAIMGQAAGSLVPSGEDSVT
AGGGHVGAAGPGLVEEGGSTSVDATIADDAVGSSCSTRGNDCRTAVIGGA
PESSSDAPPLLRGSADGGTIDSAAADNGRSSATFSSSPPSTQDANLGIPD
QEKKGVRIRAPTNSAADDRRISPGSVNTSVTEDTSSLERREVLAAAAGGL
LAIAHFNLGVEREHLGQLEAALSSYEDARVAADQHLGPESPVAKGIGVAL
EKASAAAVATASYSSKRAAWRSRSAVSSFPSIGKLQFGQRTPDGVSSFGG
RRVSPRRLRHEQQYGEETARDLLDRAYSCARPCPAPPRTDSWSRLGRTLS
PRSPQTAPGSESVGGPQRAGRWMTSDAPAARPMRTQGSAARGEGPSRPCS
VDEDLRWRALACKKWQCSPREALHAQQAANRRVDVGVA
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR011990TPR-like_helical_dom_sf