mRNA_P-littoralis_Contig130.3.2 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig130.3.2
Unique NamemRNA_P-littoralis_Contig130.3.2
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig130.3.2 vs. uniprot
Match: A0A6H5KSI7_9PHAE (DDE Tnp4 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSI7_9PHAE)

HSP 1 Score: 404 bits (1038), Expect = 2.270e-138
Identity = 198/291 (68.04%), Postives = 227/291 (78.01%), Query Frame = 1
Query:    1 FRERFRVPHAFFLRLVELSREKKWFSDGGADAAGREGIPVELKILTALHILGRGNCFDDTNQLSLMSKSMAAATFHKFCKNFAKEMFEEHIYLPTGTYQDEVMDCYRKLGFTGAIGSTDVTHVGLGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGRAIGVTQGFTGATNDKTIVRYDAAVQTTRNNKVYKDREYKLRKTDGTEFTRKGCYLIVDNGYHEWVTLMAPSKYPGDVDDAAFSKILENVRKDVECFFGILKGRFRILKLRLAYHCREDIDNIFFTCCILHNMLHS 873
            FRERFRVP+ FF  LV+LSR K+WFS G  DAA REGIP+ELK+L      G+GNCFDD  QLS MS+S+A A FHKFC++ A EMF+EHIYLPTGTY DEVM  + +LG TGA GSTDVTH+G  MCPFTLGRSFTGKEGFPT+A+EVTVDHAGRA+ VT GF G TNDKT +RYD+ V   R    Y +REYKLRK +GTE TR+GC+LIVDNGY+E              +D AFS+ LE+VRKDVECFFGILKGRFRILKLR+ YH RE IDNIFFTCCILHNMLH+
Sbjct:   96 FRERFRVPYPFFQELVKLSRAKRWFSPGEKDAANREGIPLELKVL------GKGNCFDDVEQLSKMSESIAQALFHKFCRHSAAEMFDEHIYLPTGTYLDEVMGIFHQLGCTGACGSTDVTHIGRNMCPFTLGRSFTGKEGFPTIAYEVTVDHAGRALAVTNGFAGGTNDKTTIRYDSGVNKIRTESQYTEREYKLRKVNGTERTRRGCFLIVDNGYYE------------SNEDTAFSRHLESVRKDVECFFGILKGRFRILKLRMPYHKREYIDNIFFTCCILHNMLHT 368          
BLAST of mRNA_P-littoralis_Contig130.3.2 vs. uniprot
Match: A0A6H5JAU4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAU4_9PHAE)

HSP 1 Score: 401 bits (1030), Expect = 1.600e-135
Identity = 183/296 (61.82%), Postives = 231/296 (78.04%), Query Frame = 1
Query:    1 FRERFRVPHAFFLRLVELSREKKWFSDGGADAAGREGIPVELKILTALHILGRGNCFDDTNQLSLMSKSMAAATFHKFCKNFAKEMFEEHIYLPTGTYQDEVMDCYRKLGFTGAIGSTDVTHVGLGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGRAIGVTQGFTGATNDKTIVRYDAAVQTTRNNKVYKDREYKLRKTDGTEFTRKGCYLIVDNGYHEWVTLMAPSKYPGDVDDAAFSKILENVRKDVECFFGILKGRFRILKLRLAYHCREDIDNIFFTCCILHNMLHSFDGMS 888
            FRE FR+P+ FF+ LV L +++ WF  G  DA+GR GIPV+LK+L  L IL RGNCF D   +S +S   AAATFH+F + FA+EM+ EHI+LPTG YQ +VM  Y +LGF+GA GSTDVTH+  GMCP+   RS+TGKEG+PT+A++VTVDH  R + VT GFTG+TNDK+I+RYD AV   R + +Y ++E+ + + DGT +  KGCYL+VDNGYH+WVTL+ PSKYP D +D AFSK LE+VRKDVECFFGI+KGRFRILKL + YH +EDIDN+FFTCCILHNMLHS+D  S
Sbjct:  116 FRESFRLPYPFFVELVALVKQRDWFPTGKQDASGRRGIPVQLKVLACLQILARGNCFADIYHMSFISMQTAAATFHRFTRYFAREMYAEHIFLPTGDYQKKVMTQYDRLGFSGATGSTDVTHIPWGMCPYNQARSYTGKEGYPTVAYQVTVDHTKRVLAVTPGFTGSTNDKSIIRYDTAVTKIREDPIYSEKEFTVYEADGTPYQLKGCYLLVDNGYHKWVTLIPPSKYPIDQNDLAFSKRLESVRKDVECFFGIVKGRFRILKLSIPYHKQEDIDNVFFTCCILHNMLHSYDNKS 411          
BLAST of mRNA_P-littoralis_Contig130.3.2 vs. uniprot
Match: A0A6H5JPH7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPH7_9PHAE)

HSP 1 Score: 379 bits (973), Expect = 1.090e-126
Identity = 176/294 (59.86%), Postives = 221/294 (75.17%), Query Frame = 1
Query:    1 FRERFRVPHAFFLRLVELSREKKWFSDGGADAAGREGIPVELKILTALHILGRGNCFDDTNQLSLMSKSMAAATFHKFCKNFAKEMFEEHIYLPTGTYQDEVMDCYRKLGFTGAIGSTDVTHVGLGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGRAIGVTQGFTGATNDKTIVRYDAAVQTTRNNKVYKDREYKLRKTDGTEFTRKGCYLIVDNGYHEWVTLMAPSKYPGDVDDAAFSKILENVRKDVECFFGILKGRFRILKLRLAYHCREDIDNIFFTCCILHNMLHSFDG 882
            FR  FRVP+ FF+ LVEL R++ WF  G +D  GR+ +PVELK+L  L IL RGN F D   +S +S    A+TFH+FCK FA E+++E++YLPTG    +VM+ Y ++GF GA+GSTDVTH+  GMCP+   R +TGKEG PT+AF+VTVDH+GR + VT+GFTGATNDKTI+RYD AV   R + VY +++YKL   DG +F  KGCYL+VDNGYH+W TL+ PSK P D  D  FSK LE+ RKDVEC+FGILKGRFRI KL + +H +E IDN+FFTCCILHNMLHSFD 
Sbjct:  132 FRNNFRVPYPFFVHLVELVRDRDWFPTGESDVTGRQAVPVELKVLACLQILSRGNVFADIYHMSFISFQTVASTFHRFCKYFAAELYDEYVYLPTGEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNMLHSFDN 425          
BLAST of mRNA_P-littoralis_Contig130.3.2 vs. uniprot
Match: A0A6H5JHI0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHI0_9PHAE)

HSP 1 Score: 365 bits (936), Expect = 1.390e-122
Identity = 177/297 (59.60%), Postives = 217/297 (73.06%), Query Frame = 1
Query:    1 FRERFRVPHAFFLRLVELSREKKWFSDGGADAAGREGIPVELKILTALHILGRGNCFDDTNQLSLMSKSMAAATFHKFCKNFAKEMFEEHIYLPT--GTYQDEVMDCYRKLGFTGAIGSTDVTHVGLGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGRAIGVTQGFTGATNDKTIVRYDAAVQTTRNNKVYKDREYKLRKTDGTEFTRKGCYLIVDNGYHEWVTLMAPSKYPGDVDDAAFSKILENVRKDVECFFGILKGRFRILKLRLAYHCREDIDNIFFTCCILHNMLHSFDGM 885
            FR  FRVP +FFLRLV L + K WF+  G DAA R+  PVE K+L  L ILGRGNCF    Q+S MS       FHKFCK+FA+EM++EHIYLP+      D VM  Y +LGF+GA+GS DVTH+G   CP+ L RS+TGKEG PT+ ++VTV+HAGRAI VT+GFT +TNDKT V +DA V+  R +  Y ++ + +   DGT  T KGCYL+VDNGYH+W  LM P+KYP   +D  FSK LE+VRKDVECFFGILKG FRI K+ +AYH +E IDN+FFTCCILHNMLH+FDGM
Sbjct:   56 FRLDFRVPDSFFLRLVALVKSKDWFTTSGCDAARRQSHPVEHKVLAWLTILGRGNCFASIYQVSWMSAKTVQTMFHKFCKHFAREMYDEHIYLPSEQNGELDHVMKQYDRLGFSGAMGSMDVTHIGWSKCPYNLARSYTGKEGVPTVGYQVTVNHAGRAIAVTEGFTDSTNDKTTVCWDAVVEKIRTDNQYTEKTFDVYNEDGTTTTLKGCYLLVDNGYHKWKILMEPTKYPLSENDILFSKRLESVRKDVECFFGILKGCFRIQKVAMAYHEQERIDNVFFTCCILHNMLHTFDGM 352          
BLAST of mRNA_P-littoralis_Contig130.3.2 vs. uniprot
Match: A0A6H5K796_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K796_9PHAE)

HSP 1 Score: 363 bits (932), Expect = 2.700e-122
Identity = 172/246 (69.92%), Postives = 200/246 (81.30%), Query Frame = 1
Query:  148 ILGRGNCFDDTNQLSLMSKSMAAATFHKFCKNFAKEMFEEHIYLPTGTYQDEVMDCYRKLGFTGAIGSTDVTHVGLGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGRAIGVTQGFTGATNDKTIVRYDAAVQTTRNNKVYKDREYKLRKTDGTEFTRKGCYLIVDNGYHEWVTLMAPSKYPGDVDDAAFSKILENVRKDVECFFGILKGRFRILKLRLAYHCREDIDNIFFTCCILHNMLHSFDGM 885
            +LG+GNCFDD  QLS MSKSMA  TFHKFC++FA EMF+EHIYLPTGTY DEVM  + +LG+TGA GSTDVTH+G  MCPFTLGRSFTGKEGFPT+A++VTVDH GR + VT GFTGATNDKTI+RYD+ V   R    Y +REYKLRK +GT+  R+GC+LIVDNGYHEWVTL+APSKYP   +D AFS+ LE+VRKDV CF        RILKLR+ YH RE +DNIFFTCCILHNMLH+FDG+
Sbjct:   43 VLGKGNCFDDVEQLSKMSKSMAQPTFHKFCRHFAAEMFDEHIYLPTGTYLDEVMGIFHQLGWTGACGSTDVTHIGWNMCPFTLGRSFTGKEGFPTIAYDVTVDHDGRDLAVTNGFTGATNDKTIIRYDSGVNKIRTASQYTEREYKLRKANGTKRMRRGCFLIVDNGYHEWVTLIAPSKYPQRNEDTAFSRDLESVRKDVGCF--------RILKLRMPYHKREYVDNIFFTCCILHNMLHTFDGL 280          
BLAST of mRNA_P-littoralis_Contig130.3.2 vs. uniprot
Match: A0A6H5JBE2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBE2_9PHAE)

HSP 1 Score: 353 bits (907), Expect = 2.800e-117
Identity = 175/297 (58.92%), Postives = 212/297 (71.38%), Query Frame = 1
Query:    1 FRERFRVPHAFFLRLVELSREKKWFSDGGADAAGREGIPVELKILTALHILGRGNCFDDTNQLSLMSKSMAAATFHKFCKNFAKEMFEEHIYLPT--GTYQDEVMDCYRKLGFTGAIGSTDVTHVGLGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGRAIGVTQGFTGATNDKTIVRYDAAVQTTRNNKVYKDREYKLRKTDGTEFTRKGCYLIVDNGYHEWVTLMAPSKYPGDVDDAAFSKILENVRKDVECFFGILKGRFRILKLRLAYHCREDIDNIFFTCCILHNMLHSFDGM 885
            FRE FRVP+ FFLRLVEL ++K WF+    DA GR   PVE K+L  L ILGRGN F     LS MS       FH+FC++FA EM++EHI+LP+      D VM  Y KLGF GA+GSTDVTH+G   CP+  GRS+TGKEG PT+ ++VTV+HAGR + VT+GFTG+TNDKTI+  D AV   R +K Y ++ + + K DGT  T KGCYLIVDNGYH+W  L+ PSKYP    D  FSK LE+VRKDVECFFGILK RFRILKL + Y  +E +D +FFTCCILHNMLH+ DGM
Sbjct:   85 FREDFRVPYPFFLRLVELVKKKDWFATTQRDAYGRRCHPVEHKVLACLTILGRGNVFGSIYNLSWMSTPTVQKVFHQFCEHFATEMYDEHIFLPSEENGELDRVMGQYEKLGFPGAMGSTDVTHIGWSRCPYNQGRSYTGKEGKPTVGYQVTVNHAGRVLAVTEGFTGSTNDKTIICCDEAVDRIRTDKQYAEKPFTVHKKDGTTETLKGCYLIVDNGYHKWRMLIEPSKYPLSEADLLFSKRLESVRKDVECFFGILKMRFRILKLAMTYQKQERLDYVFFTCCILHNMLHTHDGM 381          
BLAST of mRNA_P-littoralis_Contig130.3.2 vs. uniprot
Match: A0A6H5KNX4_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNX4_9PHAE)

HSP 1 Score: 343 bits (880), Expect = 1.980e-113
Identity = 175/321 (54.52%), Postives = 211/321 (65.73%), Query Frame = 1
Query:   13 FRVPHAFFLRLVELSREKKWFSDGGADAAGREGIPVELKILTALHILGRGNCFDDTNQLSLMSKSMAAATFHKFCKNFAKEMFEEHIYLPT--GTYQDEVMDCYRKLGFTGAIGSTDVTHVGLGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGRAIGVTQGFTGATNDKTIVRYDAAVQTTRNNKVYK----------------------------DREYKLRKTDGTEFTRKGCYLIVDNGYHEWVTLMAPSKYPGDVDDAAFSKILENVRKDVECFFGILKGRFRILKLRLAYHCREDIDNIFFTCCILHNMLHSFDGM 885
            FRVP+  FLRLV L + K WFS    DA G    PVE K+L  L ILGRGNCF    Q+S MS       FHKFC++FA+EM++E I+LPT      D VM  Y +LGFTGA+GS DVTH+    CP+   RS+TGKEGFPT+A++VTVDHAGRAI VT+GFTG+TNDKTIV +D AV+    +K Y                             ++ + +   DGT  T KGCYL+VDNGYH+W  L+ PSKYP   +D  FSK LE+VRKDVECFFGILKGRFRILKL + Y  +E IDN+FFTC ILHNMLH+FDGM
Sbjct:   47 FRVPYTVFLRLVALVKSKNWFSTAVTDAVGWASHPVEHKVLAWLTILGRGNCFASIYQMSWMSAKTVQGMFHKFCRHFAREMYDEQIHLPTEESGKLDHVMKQYDRLGFTGAVGSMDVTHIAWSRCPYNQARSYTGKEGFPTIAYQVTVDHAGRAIAVTEGFTGSTNDKTIVCWDTAVEKIWTDKHYTXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKTFDVYNEDGTTTTLKGCYLLVDNGYHKWQILIEPSKYPLSENDLLFSKRLESVRKDVECFFGILKGRFRILKLAMEYQSQERIDNVFFTCYILHNMLHTFDGM 367          
BLAST of mRNA_P-littoralis_Contig130.3.2 vs. uniprot
Match: A0A6H5KY50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY50_9PHAE)

HSP 1 Score: 328 bits (840), Expect = 8.080e-108
Identity = 153/256 (59.77%), Postives = 192/256 (75.00%), Query Frame = 1
Query:  115 PVELKILTALHILGRGNCFDDTNQLSLMSKSMAAATFHKFCKNFAKEMFEEHIYLPTGTYQDEVMDCYRKLGFTGAIGSTDVTHVGLGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGRAIGVTQGFTGATNDKTIVRYDAAVQTTRNNKVYKDREYKLRKTDGTEFTRKGCYLIVDNGYHEWVTLMAPSKYPGDVDDAAFSKILENVRKDVECFFGILKGRFRILKLRLAYHCREDIDNIFFTCCILHNMLHSFDG 882
            P   ++L  L IL RGN F D   +S +S    A+TFH+FCK FA E+++E++YLPTG    +VM+ Y ++GF GA+GSTDVTH+  GMCP+   R +TGKEG PT+AF+VTVDH+GR + VT+GFTGATNDKTI+RYD AV   R + VY +++YKL   DG +F  KGCYL+VDNGYH+W TL+ PSK P D  D  FSK LE+ RKDVEC+FGILKGRFRI KL + +H +E IDN+FFTCCILHNMLHSFD 
Sbjct:   79 PPHTQVLACLQILSRGNVFADIYHMSFISFQTVASTFHRFCKYFAAELYDEYVYLPTGEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNMLHSFDN 334          
BLAST of mRNA_P-littoralis_Contig130.3.2 vs. uniprot
Match: A0A6H5K872_9PHAE (DDE Tnp4 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K872_9PHAE)

HSP 1 Score: 323 bits (827), Expect = 1.060e-105
Identity = 162/274 (59.12%), Postives = 187/274 (68.25%), Query Frame = 1
Query:   64 KKWFSDGGADAAGREGIPVELKILTALHILGRGNCFDDTNQLSLMSKSMAAATFHKFCKNFAKEMFEEHIYLPTGTYQDEVMDCYRKLGFTGAIGSTDVTHVGLGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGRAIGVTQGFTGATNDKTIVRYDAAVQTTRNNKVYKDREYKLRKTDGTEFTRKGCYLIVDNGYHEWVTLMAPSKYPGDVDDAAFSKILENVRKDVECFFGILKGRFRILKLRLAYHCREDIDNIFFTCCILHNMLHSFDGM 885
            K W S  G     R G  ++L +L      G+GNCFDD  QLS MS SMA ATFHKFC++FA EMF+EHI+ PT TY DE M  + +LG TGA  STDVTH+   MCPFTLGRSFTGKEGFPT+A+EVTVDHA RA+ VT GFTGA NDKT++ YD+ V   R    Y +R+YKLRK +GTE TR+GC+ IVDNGYHE                            DVECFFGILKGRFRILKLR+ YH RE IDNIFFTCCI HNMLH+FDG+
Sbjct:   82 KNWSSWQGRSGGFRRGRRMQLTVL------GKGNCFDDVEQLSKMSISMAQATFHKFCRHFAAEMFDEHIFSPTETYLDEFMGIFHQLGCTGACRSTDVTHIDCNMCPFTLGRSFTGKEGFPTIAYEVTVDHASRALAVTNGFTGAMNDKTVIWYDSGVNDIRTESQYTERQYKLRKANGTERTRRGCFSIVDNGYHE----------------------------DVECFFGILKGRFRILKLRMPYHKREYIDNIFFTCCIRHNMLHTFDGL 321          
BLAST of mRNA_P-littoralis_Contig130.3.2 vs. uniprot
Match: A0A6H5KEB6_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEB6_9PHAE)

HSP 1 Score: 327 bits (837), Expect = 1.760e-104
Identity = 171/288 (59.38%), Postives = 197/288 (68.40%), Query Frame = 1
Query:   85 GADAAGREGIPVELKILTALHILGRGNCFDDTNQLSLMSKSMAAATFHKFCKNFAKEMFEEHIYLPTGTYQDEVMDCYRKLGFTGAIGSTDVTHVGLGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGRAIGVTQGFTGATNDKTIVRYDAAVQTTRNNKVYKDREYKLRKTDGTEFTRKGCYLIVDNG----------YHE---------------WVTLMAPSKYPGDVDDAAFSKILENVRKDVECFFGILKGRFRILKLRLAYHCREDIDNIFFTCCILHNMLHS 873
            G    G+EG P     +T  H    G     TN  +           HKFC++FA EMF+EHIYL TGTY DEVM  + +LG TGA GST+VTH+G  MCPFTLGRSFTGKEGFPT+A EVTVDHAGRA+ VT GFTGATNDKTI+RYD+ V   R    Y +REYKLRK +GTE TR+GC+LIVDNG          +H+               WVTL+APSKYP   +D AFS+ LE+VRKDVECFFGILKGRFRILKLR+ YH RE IDNIFFTCCILHNMLH+
Sbjct:  213 GRSFTGKEGFPTIACEVTVDHA---GRALAVTNGFT-----------HKFCRHFAAEMFDEHIYLLTGTYLDEVMGIFHQLGCTGACGSTNVTHIGWNMCPFTLGRSFTGKEGFPTIACEVTVDHAGRALAVTNGFTGATNDKTIIRYDSGVNKIRTESQYTEREYKLRKANGTERTRRGCFLIVDNGMSVPKDLCVVHHKNIVAKLPSSERVLIWWVTLIAPSKYPQSNEDTAFSRHLESVRKDVECFFGILKGRFRILKLRMPYHKREYIDNIFFTCCILHNMLHT 486          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig130.3.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KSI7_9PHAE2.270e-13868.04DDE Tnp4 domain-containing protein (Fragment) n=1 ... [more]
A0A6H5JAU4_9PHAE1.600e-13561.82Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JPH7_9PHAE1.090e-12659.86Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JHI0_9PHAE1.390e-12259.60Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K796_9PHAE2.700e-12269.92Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JBE2_9PHAE2.800e-11758.92Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KNX4_9PHAE1.980e-11354.52DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5KY50_9PHAE8.080e-10859.77Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K872_9PHAE1.060e-10559.12DDE Tnp4 domain-containing protein (Fragment) n=1 ... [more]
A0A6H5KEB6_9PHAE1.760e-10459.38DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig130contigP-littoralis_Contig130:28482..30813 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7FSK2
PFAMsPlant_tran
Model size888
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons3
Evalue1.77e-89
EggNOG OGs2E2RF@1|root,2S9YA@2759|Eukaryota
DescriptionPlant transposon protein
Cds size888
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789587.7726393-CDS-P-littoralis_Contig130:28481..286101680789587.7726393-CDS-P-littoralis_Contig130:28481..28610Pylaiella littoralis U1_48CDSP-littoralis_Contig130 28482..28610 +
1680789587.784341-CDS-P-littoralis_Contig130:29489..300171680789587.784341-CDS-P-littoralis_Contig130:29489..30017Pylaiella littoralis U1_48CDSP-littoralis_Contig130 29490..30017 +
1680789587.7946703-CDS-P-littoralis_Contig130:30582..308131680789587.7946703-CDS-P-littoralis_Contig130:30582..30813Pylaiella littoralis U1_48CDSP-littoralis_Contig130 30583..30813 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig130.3.2prot_P-littoralis_Contig130.3.2Pylaiella littoralis U1_48polypeptideP-littoralis_Contig130 28482..30813 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig130.3.2

>prot_P-littoralis_Contig130.3.2 ID=prot_P-littoralis_Contig130.3.2|Name=mRNA_P-littoralis_Contig130.3.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=296bp
FRERFRVPHAFFLRLVELSREKKWFSDGGADAAGREGIPVELKILTALHI
LGRGNCFDDTNQLSLMSKSMAAATFHKFCKNFAKEMFEEHIYLPTGTYQD
EVMDCYRKLGFTGAIGSTDVTHVGLGMCPFTLGRSFTGKEGFPTLAFEVT
VDHAGRAIGVTQGFTGATNDKTIVRYDAAVQTTRNNKVYKDREYKLRKTD
GTEFTRKGCYLIVDNGYHEWVTLMAPSKYPGDVDDAAFSKILENVRKDVE
CFFGILKGRFRILKLRLAYHCREDIDNIFFTCCILHNMLHSFDGMS
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mRNA from alignment at P-littoralis_Contig130:28482..30813+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig130.3.2 ID=mRNA_P-littoralis_Contig130.3.2|Name=mRNA_P-littoralis_Contig130.3.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=2332bp|location=Sequence derived from alignment at P-littoralis_Contig130:28482..30813+ (Pylaiella littoralis U1_48)
TTCCGAGAGCGCTTTCGCGTGCCTCACGCCTTCTTCCTGAGGTTGGTGGA GCTGTCGAGGGAGAAGAAGTGGTTCTCAGACGGAGGAGCGGATGCAGCAG GCCGTGAGGGTATCCCAGTAGAGCTCAAGGTGCGCTTATATAATAATAAT GACACTTCGTACGAAGCAACATACTGGAAAAGATGATAGATGGTATGTGT GCAAGTACAATTTACAGCAGCTTTCCCCTGCTGTACGTCACACAACTGCT GTACGTCACACAACTTCTGTCCACACACTGCCGTCCCCCTCATGACTGCA GCACAACTGCTGCACCTGATGAAAGTCTGCATGCCTTACGGGGCCGGTAC ATCTGTGAAGCACTTGCAGCTGTAGGGTATGCGAGACCAATCAAGTGCGC AACGATTTTTGTGGGTCGACACGACGAGGACTAGCGAATGAACCTATTCT GGATAACAAAGTGCCGCAGACGGATATCACCACAGTAGTGTGTTGCTGAT GCTGCCGAAGATACCGCTGCATGTTTTTGGGTACTTTTCTGTGCCCTACC CCTGGGTCGGTGGTTATTACGAGGTACTCATATTCCGAATCTTTCTTGAT TGGTCGTTTCGGGTCGAGTGGATGCGGAAACACGGGAATGCAACCATACA TGATGCTGTGCTGCTGTAGACTGGCGTGCAGAATAGATGGGATGGCAACA CAACACAACTGTATTTATGACGCTTTCACGTAAAAAAAAACATGCTGTTG CTGCGCCACTACGTGACGCTATTCCGAGACAACAGCTGTGACGATGTGTG TACCTGGTATGTGAAAATCAAAATATCGTCCGTAACACGAAATCATGTAT CTGCCTGATTCGTATACACGGACTACTTAAATTGTAGTTGTCCAGCCGAG CGAATCGTGCAACAGCAACTAGTTGACTGCCGGACACTCCCGCCCCCCCC CCCCCCTTTCTCCCCGCCGACGCGTGCGCTCCCCCTCCCCCCTGACATTA TTCGACAGATCTTGACGGCCCTCCACATACTCGGCAGGGGCAACTGCTTC GACGACACCAACCAGCTGTCGTTAATGAGCAAATCGATGGCGGCAGCAAC GTTCCACAAGTTCTGCAAGAATTTCGCGAAGGAGATGTTCGAGGAGCATA TCTACCTTCCAACAGGAACGTACCAAGACGAAGTGATGGACTGCTACCGC AAATTGGGTTTTACTGGAGCAATCGGTTCTACCGACGTTACTCACGTCGG CTTGGGCATGTGTCCGTTCACCCTTGGCCGTTCTTTCACGGGCAAGGAGG GGTTTCCAACCCTGGCATTCGAGGTTACCGTCGACCACGCGGGGCGCGCC ATTGGCGTCACCCAAGGGTTCACCGGTGCGACCAACGACAAGACGATCGT CCGCTACGACGCAGCCGTACAGACCACCAGGAACAACAAAGTGTACAAGG ATCGAGAGTACAAGCTCAGGAAGACGGATGGCACGGAGTTCACCCGGAAA GGATGCTATTTGATCGTCGACAACGGCTATCACGAGGTGAGTGTATTGGG GGCGTGGGGAGTATTAGAATATCCGAACGTAGTGCGTGCTCCGTAACGCC TCGGGTTGATGTGAAGTCTAAAAAAAAACACGCCGGTACACCGAAAGCAG ACCAATGCCATATTTGTCGGTACTGAATGAGGATCTTTGTGGCATGTCGG CCCCGTGCATGGGGCGTCGACCTTACGCAGCGGCACACCAAGGTAAAAAA CATTTTGCTGCTTCGCGTTCCTTCTATTCGTAGTTGTTTTTGTGCTGGTT CCGTTTGGACGGTTGCGTTCACGTTCTTACATTTCGAGCATACATTACCC CATTTATAGGTTTTAACAAACAAATCTGCTCAGGGGTGGTCAGATGGCAA ATATTGTACTTCGAAGTACAAAGTTGTAGGCATCTGTGTTGTCCACATGT CAACACGGTTCCTCGTTCCCCCCGAGGAGTTTGATCGTGAAAATATGTGC GTCGGGGCCTGAGGTTTCCAGAGCCTTTCCGTAGCTCACCAGTCGTCCCT TTCGACCCCCCCCCCCTGCTGCTGTTGTGCCATCGTGTGCCAAATCAACA GTGGGTCACCCTCATGGCCCCATCGAAGTACCCGGGTGACGTGGATGACG CGGCGTTCTCCAAGATACTTGAGAATGTGCGCAAGGATGTGGAGTGTTTC TTCGGCATTCTGAAAGGGCGCTTCAGAATCCTGAAGCTCCGCCTGGCCTA CCACTGCAGGGAAGACATCGATAACATCTTCTTCACATGCTGCATTCTCC ACAACATGCTCCACTCCTTCGACGGCATGAGC
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Coding sequence (CDS) from alignment at P-littoralis_Contig130:28482..30813+

>mRNA_P-littoralis_Contig130.3.2 ID=mRNA_P-littoralis_Contig130.3.2|Name=mRNA_P-littoralis_Contig130.3.2|organism=Pylaiella littoralis U1_48|type=CDS|length=888bp|location=Sequence derived from alignment at P-littoralis_Contig130:28482..30813+ (Pylaiella littoralis U1_48)
TTCCGAGAGCGCTTTCGCGTGCCTCACGCCTTCTTCCTGAGGTTGGTGGA
GCTGTCGAGGGAGAAGAAGTGGTTCTCAGACGGAGGAGCGGATGCAGCAG
GCCGTGAGGGTATCCCAGTAGAGCTCAAGATCTTGACGGCCCTCCACATA
CTCGGCAGGGGCAACTGCTTCGACGACACCAACCAGCTGTCGTTAATGAG
CAAATCGATGGCGGCAGCAACGTTCCACAAGTTCTGCAAGAATTTCGCGA
AGGAGATGTTCGAGGAGCATATCTACCTTCCAACAGGAACGTACCAAGAC
GAAGTGATGGACTGCTACCGCAAATTGGGTTTTACTGGAGCAATCGGTTC
TACCGACGTTACTCACGTCGGCTTGGGCATGTGTCCGTTCACCCTTGGCC
GTTCTTTCACGGGCAAGGAGGGGTTTCCAACCCTGGCATTCGAGGTTACC
GTCGACCACGCGGGGCGCGCCATTGGCGTCACCCAAGGGTTCACCGGTGC
GACCAACGACAAGACGATCGTCCGCTACGACGCAGCCGTACAGACCACCA
GGAACAACAAAGTGTACAAGGATCGAGAGTACAAGCTCAGGAAGACGGAT
GGCACGGAGTTCACCCGGAAAGGATGCTATTTGATCGTCGACAACGGCTA
TCACGAGTGGGTCACCCTCATGGCCCCATCGAAGTACCCGGGTGACGTGG
ATGACGCGGCGTTCTCCAAGATACTTGAGAATGTGCGCAAGGATGTGGAG
TGTTTCTTCGGCATTCTGAAAGGGCGCTTCAGAATCCTGAAGCTCCGCCT
GGCCTACCACTGCAGGGAAGACATCGATAACATCTTCTTCACATGCTGCA
TTCTCCACAACATGCTCCACTCCTTCGACGGCATGAGC
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