prot_P-littoralis_Contig13.198.3 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig13.198.3
Unique Nameprot_P-littoralis_Contig13.198.3
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length221
Homology
BLAST of mRNA_P-littoralis_Contig13.198.3 vs. uniprot
Match: D7FM06_ECTSI (Similar to SET domain, bifurcated 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM06_ECTSI)

HSP 1 Score: 227 bits (578), Expect = 3.110e-65
Identity = 106/161 (65.84%), Postives = 121/161 (75.16%), Query Frame = 0
Query:   16 ASSGTTLSPKAQEHQGREVEHHRALARQGVLRCFACGQSCYPNAVKRHPKLSVHVCHACHDMYHSGTFEVQDADGRENYCRMCGDGGEIVSCDERHAKTRKPCPYSFCLDCLELNFGAEERVRCAKKFKCWICDDGPMEQLRRRIPGYEPNSKVVMTSLIL 176
            A   T  S  AQ +  ++ E H  LA +G LRCFACG+S   N V+ HPKL VHVC  CHD+YH G F+V D DGRE YCRMCGDGGE+ SCDER A TR+PCP+SFCL C+E NFG E RV C+ KFKCWICDDGPMEQLRRRIPGYE NSK V+TSLI+
Sbjct:    9 AKCATLPSNTAQRYHEQQAEEHLELAARGRLRCFACGESQPHNQVRCHPKLFVHVCSHCHDVYHQGEFDVAD-DGREMYCRMCGDGGELTSCDERQAGTRRPCPFSFCLACIERNFGYEHRVHCSHKFKCWICDDGPMEQLRRRIPGYEHNSKSVLTSLIM 168          
BLAST of mRNA_P-littoralis_Contig13.198.3 vs. uniprot
Match: A0A7S4D4Y2_HETAK (DNA helicase (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D4Y2_HETAK)

HSP 1 Score: 82.8 bits (203), Expect = 4.860e-15
Identity = 57/173 (32.95%), Postives = 74/173 (42.77%), Query Frame = 0
Query:    3 FCLPWSYREKKRRASSGTTLSPKAQEHQGREVEHHRALARQG-----VLRCFACGQSCYPNAVKR---HPKLSVHVCHACHDMYHSGTFEVQDADGRENYCRMCGDGGEIVSCDERHAKTRKPCPYSFCLDCLELNFGAEERVRC-----AKKFKCWICDDGPMEQLRRRIPG 162
            F LP   R   R A   + +S K      ++  H  A    G        C ACG         +   HP L + VC  C D Y+ G F + D DG+E YCR CGDGG+I  CD         CP  FC  C+E NFG  E  R      A  + C++CD   +  L+  + G
Sbjct:  152 FILPKGERGVPRAAEPKSGVSRKKTPGGNKDTAHQAAGDGDGPSPGLAFLCTACGAKLEKGRRTQRHLHPLLDMPVCKTCLDTYNFGEFTI-DEDGKEMYCRWCGDGGDIFPCDR--------CPKGFCRACVERNFGPREVERIESLDGAASWACYVCDREALNALKDAVWG 315          
BLAST of mRNA_P-littoralis_Contig13.198.3 vs. uniprot
Match: A0A6P7T160_OCTVU (DNA helicase n=3 Tax=Octopus TaxID=6643 RepID=A0A6P7T160_OCTVU)

HSP 1 Score: 84.0 bits (206), Expect = 5.020e-15
Identity = 44/119 (36.97%), Postives = 64/119 (53.78%), Query Frame = 0
Query:   45 VLRCFACGQSCYPN---AVKRHPKLSVHVCHACHDMYHSGTFEVQDADGRENYCRMCGDGGEIVSCDERHAKTRKPCPYSFCLDCLELNFGAEERVRC----AKKFKCWICDDGPMEQL 156
            ++ C ACG+   P+   AVKRHPKL V +C  C+  Y SG    +DADG +  CR CG+GG ++ CD         C  +FC  C+  N G  E        ++K+KC++CD   ++ L
Sbjct:  118 IVTCTACGKQLNPSKKGAVKRHPKLKVLICKKCYKYYSSGEIS-RDADGLDEQCRWCGEGGRLLGCDF--------CHNAFCKGCILRNLGRSELFIITDGGSEKWKCYVCDPPKIKAL 227          
BLAST of mRNA_P-littoralis_Contig13.198.3 vs. uniprot
Match: A0A812E4J1_SEPPH (DNA helicase n=4 Tax=Sepia pharaonis TaxID=158019 RepID=A0A812E4J1_SEPPH)

HSP 1 Score: 83.2 bits (204), Expect = 8.980e-15
Identity = 45/116 (38.79%), Postives = 64/116 (55.17%), Query Frame = 0
Query:   48 CFACGQSCYPN---AVKRHPKLSVHVCHACHDMYHSGTFEVQDADGRENYCRMCGDGGEIVSCDERHAKTRKPCPYSFCLDCLELNFGAEE-RVRC---AKKFKCWICDDGPMEQL 156
            C +CG+   P+   A+KRHPKL V VC  C+  Y SG    QDADG +  CR CG+GG ++ CD         C  +FC  C+  N G  E R+     ++K+KC++CD   ++ L
Sbjct:  130 CTSCGKQLNPSKKGAIKRHPKLKVIVCKKCYKYYSSGEIS-QDADGLDEQCRWCGEGGRLLGCDF--------CHNAFCKGCILRNLGRSELRIITDAGSEKWKCYVCDPPKLKAL 236          
BLAST of mRNA_P-littoralis_Contig13.198.3 vs. uniprot
Match: H2XJT4_CIOIN (DNA helicase n=3 Tax=Ciona intestinalis TaxID=7719 RepID=H2XJT4_CIOIN)

HSP 1 Score: 82.4 bits (202), Expect = 1.260e-14
Identity = 39/117 (33.33%), Postives = 62/117 (52.99%), Query Frame = 0
Query:   45 VLRCFACGQSCYPNA---VKRHPKLSVHVCHACHDMYHSGTFEVQDADGRENYCRMCGDGGEIVSCDERHAKTRKPCPYSFCLDCLELNFGAEE--RVRCAKKFKCWICDDGPMEQL 156
            V+RC  CG+    +       HP L V +C  C+  YHSGTF+ +D +G + +CR CGDGG+++ CD         C   FC  C+  NF  ++   +  +   +C++CD  P++ L
Sbjct:   58 VIRCTGCGEQILTHLSSNANEHPVLHVLLCKRCYSYYHSGTFQ-KDENGIDEFCRWCGDGGDVIMCDS--------CTNVFCKTCIRRNFSRKKANEIFTSDTVQCFVCDLTPLQSL 165          
BLAST of mRNA_P-littoralis_Contig13.198.3 vs. uniprot
Match: E4XUH5_OIKDI (DNA helicase n=2 Tax=Oikopleura dioica TaxID=34765 RepID=E4XUH5_OIKDI)

HSP 1 Score: 80.9 bits (198), Expect = 5.510e-14
Identity = 43/115 (37.39%), Postives = 66/115 (57.39%), Query Frame = 0
Query:   46 LRCFACGQSCYPNAVKR---HPKLSVHVCHACHDMYHSGTFEVQDADGRENYCRMCGDGGEIVSCDERHAKTRKPCPYSFCLDCLELNFG-AEERVRCAKKFKCWICDDGPMEQL 156
            + C  CG+    N   R   HP+L+V  C  C+  Y+SG + ++D +G   +CR CG+GG+++ CDE        C  SFC  C++ NFG AE ++  A K+KC+ CD  P+ +L
Sbjct:   18 ITCTVCGEQI--NVFGRWNVHPRLNVVQCAPCNKFYNSGRW-IKDEEGYYEHCRWCGEGGDLLGCDE--------CVESFCKKCIKRNFGRAETQMIEAAKWKCFCCDPKPLRKL 121          
BLAST of mRNA_P-littoralis_Contig13.198.3 vs. uniprot
Match: UPI001CB7E4CA (transcriptional regulator ATRX isoform X1 n=3 Tax=Chiloscyllium plagiosum TaxID=36176 RepID=UPI001CB7E4CA)

HSP 1 Score: 80.5 bits (197), Expect = 7.780e-14
Identity = 41/119 (34.45%), Postives = 62/119 (52.10%), Query Frame = 0
Query:   44 GVLRCFACGQSC---YPNAVKRHPKLSVHVCHACHDMYHSGTFEVQDADGRENYCRMCGDGGEIVSCDERHAKTRKPCPYSFCLDCLELNFGAEERVRCA---KKFKCWICDDGPMEQL 156
            G++ C ACGQ     + ++V+RHP L V +C +CH  Y S     +DADG +  CR C +GG ++ CD         C  +FC  C+  N G +E        KK+ C++C+  P+  L
Sbjct:  166 GIVSCTACGQQVNHFHKDSVQRHPALKVLICRSCHKYYMSDDIS-RDADGMDEQCRWCAEGGNLICCDF--------CHNAFCKSCILRNLGRKELSNIMDENKKWYCYVCNPEPLLDL 275          
BLAST of mRNA_P-littoralis_Contig13.198.3 vs. uniprot
Match: UPI0009A3CC6E (transcriptional regulator ATRX n=1 Tax=Rhincodon typus TaxID=259920 RepID=UPI0009A3CC6E)

HSP 1 Score: 80.5 bits (197), Expect = 7.780e-14
Identity = 41/119 (34.45%), Postives = 62/119 (52.10%), Query Frame = 0
Query:   44 GVLRCFACGQSC---YPNAVKRHPKLSVHVCHACHDMYHSGTFEVQDADGRENYCRMCGDGGEIVSCDERHAKTRKPCPYSFCLDCLELNFGAEERVRCA---KKFKCWICDDGPMEQL 156
            G++ C ACGQ     + ++V+RHP L V +C +CH  Y S     +DADG +  CR C +GG ++ CD         C  +FC  C+  N G +E        KK+ C++C+  P+  L
Sbjct:  166 GIVSCTACGQQVNHFHKDSVQRHPALKVLICRSCHKYYMSDDIS-RDADGMDEQCRWCAEGGNLICCDF--------CHNAFCKSCILRNLGRKELSNIMDENKKWYCYVCNPEPLLDL 275          
BLAST of mRNA_P-littoralis_Contig13.198.3 vs. uniprot
Match: A0A401RVM2_CHIPU (DNA helicase n=1 Tax=Chiloscyllium punctatum TaxID=137246 RepID=A0A401RVM2_CHIPU)

HSP 1 Score: 80.5 bits (197), Expect = 7.780e-14
Identity = 41/119 (34.45%), Postives = 62/119 (52.10%), Query Frame = 0
Query:   44 GVLRCFACGQSC---YPNAVKRHPKLSVHVCHACHDMYHSGTFEVQDADGRENYCRMCGDGGEIVSCDERHAKTRKPCPYSFCLDCLELNFGAEERVRCA---KKFKCWICDDGPMEQL 156
            G++ C ACGQ     + ++V+RHP L V +C +CH  Y S     +DADG +  CR C +GG ++ CD         C  +FC  C+  N G +E        KK+ C++C+  P+  L
Sbjct:  171 GIVSCTACGQQVNHFHKDSVQRHPALKVLICRSCHKYYMSDDIS-RDADGMDEQCRWCAEGGNLICCDF--------CHNAFCKSCILRNLGRKELSNIMDENKKWYCYVCNPEPLLDL 280          
BLAST of mRNA_P-littoralis_Contig13.198.3 vs. uniprot
Match: UPI001B7E3CC8 (transcriptional regulator ATRX isoform X1 n=8 Tax=Carcharodon carcharias TaxID=13397 RepID=UPI001B7E3CC8)

HSP 1 Score: 80.5 bits (197), Expect = 7.780e-14
Identity = 41/119 (34.45%), Postives = 62/119 (52.10%), Query Frame = 0
Query:   44 GVLRCFACGQSC---YPNAVKRHPKLSVHVCHACHDMYHSGTFEVQDADGRENYCRMCGDGGEIVSCDERHAKTRKPCPYSFCLDCLELNFGAEERVRCA---KKFKCWICDDGPMEQL 156
            G++ C ACGQ     + ++V+RHP L V +C +CH  Y S     +DADG +  CR C +GG ++ CD         C  +FC  C+  N G +E        KK+ C++C+  P+  L
Sbjct:  193 GIVSCTACGQQVNHFHKDSVQRHPALKVLICRSCHKYYMSDDIS-RDADGMDEQCRWCAEGGNLICCDF--------CHNAFCKSCILRNLGRKELSNIMDENKKWYCYVCNPEPLLDL 302          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig13.198.3 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FM06_ECTSI3.110e-6565.84Similar to SET domain, bifurcated 1 n=1 Tax=Ectoca... [more]
A0A7S4D4Y2_HETAK4.860e-1532.95DNA helicase (Fragment) n=1 Tax=Heterosigma akashi... [more]
A0A6P7T160_OCTVU5.020e-1536.97DNA helicase n=3 Tax=Octopus TaxID=6643 RepID=A0A6... [more]
A0A812E4J1_SEPPH8.980e-1538.79DNA helicase n=4 Tax=Sepia pharaonis TaxID=158019 ... [more]
H2XJT4_CIOIN1.260e-1433.33DNA helicase n=3 Tax=Ciona intestinalis TaxID=7719... [more]
E4XUH5_OIKDI5.510e-1437.39DNA helicase n=2 Tax=Oikopleura dioica TaxID=34765... [more]
UPI001CB7E4CA7.780e-1434.45transcriptional regulator ATRX isoform X1 n=3 Tax=... [more]
UPI0009A3CC6E7.780e-1434.45transcriptional regulator ATRX n=1 Tax=Rhincodon t... [more]
A0A401RVM2_CHIPU7.780e-1434.45DNA helicase n=1 Tax=Chiloscyllium punctatum TaxID... [more]
UPI001B7E3CC87.780e-1434.45transcriptional regulator ATRX isoform X1 n=8 Tax=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 80..168
e-value: 1.8E-6
score: 30.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 185..208
NoneNo IPR availablePANTHERPTHR46357TRANSCRIPTIONAL REGULATOR ATRXcoord: 25..157
IPR025766ADD domainPROSITEPS51533ADDcoord: 36..176
score: 12.137148
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 88..157

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig13contigP-littoralis_Contig13:1075386..1080567 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig13.198.3mRNA_P-littoralis_Contig13.198.3Pylaiella littoralis U1_48mRNAP-littoralis_Contig13 1075386..1080568 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig13.198.3 ID=prot_P-littoralis_Contig13.198.3|Name=mRNA_P-littoralis_Contig13.198.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=221bp
SCFCLPWSYREKKRRASSGTTLSPKAQEHQGREVEHHRALARQGVLRCFA
CGQSCYPNAVKRHPKLSVHVCHACHDMYHSGTFEVQDADGRENYCRMCGD
GGEIVSCDERHAKTRKPCPYSFCLDCLELNFGAEERVRCAKKFKCWICDD
GPMEQLRRRIPGYEPNSKVVMTSLILNLKRGKGGLATRVKKPPPPGRRSN
GNSGGGAATAVPAAAAVLQAK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR025766ADD
IPR011011Znf_FYVE_PHD