prot_P-littoralis_Contig13.197.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig13.197.1
Unique Nameprot_P-littoralis_Contig13.197.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length144
Homology
[Close]
BLAST of mRNA_P-littoralis_Contig13.197.1 vs. uniprot
Match: D7FM05_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FM05_ECTSI)

HSP 1 Score: 150 bits (378), Expect = 2.220e-44
Identity = 91/143 (63.64%), Postives = 99/143 (69.23%), Query Frame = 0 
Query:    1 MYGSTATTTTPSSAQSRRLLDDSLALLDHAPWFAFALACHGPGPWFDVRSASKYMDIVEVQNETSNIADDVMGRLFGQREALESSQQRLGEMRGMTDDARLHLQEMERKAYMQKMCLYATIALLSILILLVAYREITNGGRLF 143
            MYGST  TTTPSSAQSRRLLDDSLA                                  VQNETSN+ADDVM RLFGQRE LES+QQRLG+MRGMTD+ARLHL+EME+KA  QK+CLY TIALLSILI LV YRE+TNGG LF
Sbjct:    1 MYGST--TTTPSSAQSRRLLDDSLA----------------------------------VQNETSNMADDVMARLFGQRETLESAQQRLGDMRGMTDEARLHLKEMEQKALRQKICLYLTIALLSILICLVIYREVTNGGHLF 107
[Close]
BLAST of mRNA_P-littoralis_Contig13.197.1 vs. uniprot
Match: A0A7S2V4Z6_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V4Z6_9STRA)

HSP 1 Score: 61.2 bits (147), Expect = 2.660e-9
Identity = 37/89 (41.57%), Postives = 51/89 (57.30%), Query Frame = 0 
Query:   54 YMDIVEVQNETSNIADDVMGRLFGQREALESSQQRLGEMRGMTDDARLHLQEMERKAYMQKMCLYATIALLSILILLVAYREITNGGRL 142
            + D ++V  ET  I  DV   L+GQR  LE S+  + EM   T  AR  L  M R+A M+K+ LYA IAL   +I+++ Y  I  GG+L
Sbjct:   34 FEDSMKVIGETERIGGDVEATLYGQRSQLEESRNMVNEMDEYTKAARSTLDSMHRRAIMEKVILYAVIALEVAIIIIIIYFMIKGGGKL 122
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig13.197.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FM05_ECTSI2.220e-4463.64Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2V4Z6_9STRA2.660e-941.57Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.5.110coord: 48..114
e-value: 1.4E-8
score: 36.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig13contigP-littoralis_Contig13:1060265..1072800 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig13.197.1mRNA_P-littoralis_Contig13.197.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig13 1059068..1072898 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig13.197.1 ID=prot_P-littoralis_Contig13.197.1|Name=mRNA_P-littoralis_Contig13.197.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=144bp
MYGSTATTTTPSSAQSRRLLDDSLALLDHAPWFAFALACHGPGPWFDVRS
ASKYMDIVEVQNETSNIADDVMGRLFGQREALESSQQRLGEMRGMTDDAR
LHLQEMERKAYMQKMCLYATIALLSILILLVAYREITNGGRLF*
back to top