prot_P-littoralis_Contig13.176.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig13.176.2
Unique Nameprot_P-littoralis_Contig13.176.2
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length241
Homology
BLAST of mRNA_P-littoralis_Contig13.176.2 vs. uniprot
Match: D7FLZ5_ECTSI (40S ribosomal protein S4 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLZ5_ECTSI)

HSP 1 Score: 472 bits (1214), Expect = 9.340e-168
Identity = 233/240 (97.08%), Postives = 240/240 (100.00%), Query Frame = 0
Query:    1 MEGIWAPKPSPGPHLNRECLPLVIIIRNRLKYALTMSEANMICMQKLVKVDGKVRTDVNFPAGFMDVVQIQKSGDLFRLLYNTKGRFVLHRISDEESKFKLCRVNKVEMSKNKIPYLVTHDGRTIRYPDPLIKVNDTIKVDLETGKAIDTIKFEIGNVCMIARGRNAGRVGIMQHIERHPGSFDIVSVKDGAGHIFATRLQNIFSMGHGTRAMVSLPKGKGIKLSILEEKAAKIKKAQNS 240
            MEGIWAPKPSPGPHLNRECLPLVIIIRNRLKYALTMSEANMICMQKL+KVDGKVRTDVNFPAGFMDVVQIQKSGDLFRLLYNTKGRFVLHRIS+EESKFKLCRVNKVEMSKNKIPYLVTHDGRTIRYPDPLIKVNDTIKVDLETGKAIDTIKFEIGNVCMIARGRNAGRVGIMQHIERHPGSFDIVSVKDGAGH+FATRLQNIF+MGHGTRAMVSLPKGKG+KL+ILEEKAAKIKKAQN+
Sbjct:   23 MEGIWAPKPSPGPHLNRECLPLVIIIRNRLKYALTMSEANMICMQKLIKVDGKVRTDVNFPAGFMDVVQIQKSGDLFRLLYNTKGRFVLHRISEEESKFKLCRVNKVEMSKNKIPYLVTHDGRTIRYPDPLIKVNDTIKVDLETGKAIDTIKFEIGNVCMIARGRNAGRVGIMQHIERHPGSFDIVSVKDGAGHVFATRLQNIFTMGHGTRAMVSLPKGKGVKLTILEEKAAKIKKAQNN 262          
BLAST of mRNA_P-littoralis_Contig13.176.2 vs. uniprot
Match: A0A835ZEV0_9STRA (40S ribosomal protein S4 n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEV0_9STRA)

HSP 1 Score: 381 bits (978), Expect = 8.420e-132
Identity = 182/239 (76.15%), Postives = 211/239 (88.28%), Query Frame = 0
Query:    1 MEGIWAPKPSPGPHLNRECLPLVIIIRNRLKYALTMSEANMICMQKLVKVDGKVRTDVNFPAGFMDVVQIQKSGDLFRLLYNTKGRFVLHRISDEESKFKLCRVNKVEMSKNKIPYLVTHDGRTIRYPDPLIKVNDTIKVDLETGKAIDTIKFEIGNVCMIARGRNAGRVGIMQHIERHPGSFDIVSVKDGAGHIFATRLQNIFSMGHGTRAMVSLPKGKGIKLSILEEKAAKIKKAQN 239
            +EGIWAPKPS GPH  RECLPL+II+RNRLKYALT +EANMICMQK VKVDGKVRTD+NFPAGFMDVV I+KS D FRLLYNTKGRFVLHR+ DEE+K+KLCRV KVE+SK KIP+LVTHDGRTIRYPDPL+KVND+IKVD+ETGK  D  K+EIGN+CMI+RG N GRVG +QHIERHPGSFDIV+VKD AG++FATR  NIF +G  TR  +SLP+GKG+KL+ILEE+AA+ K+A N
Sbjct:   22 LEGIWAPKPSCGPHNGRECLPLIIIVRNRLKYALTKAEANMICMQKHVKVDGKVRTDLNFPAGFMDVVSIEKSADQFRLLYNTKGRFVLHRVKDEEAKYKLCRVQKVEVSKKKIPFLVTHDGRTIRYPDPLVKVNDSIKVDVETGKMSDIYKYEIGNLCMISRGHNTGRVGTIQHIERHPGSFDIVTVKDSAGNVFATRQANIFVLGESTRPAISLPRGKGVKLTILEERAARDKRAAN 260          
BLAST of mRNA_P-littoralis_Contig13.176.2 vs. uniprot
Match: A0A7S2WPT4_9STRA (40S ribosomal protein S4 n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WPT4_9STRA)

HSP 1 Score: 361 bits (926), Expect = 1.210e-123
Identity = 169/231 (73.16%), Postives = 201/231 (87.01%), Query Frame = 0
Query:    1 MEGIWAPKPSPGPHLNRECLPLVIIIRNRLKYALTMSEANMICMQKLVKVDGKVRTDVNFPAGFMDVVQIQKSGDLFRLLYNTKGRFVLHRISDEESKFKLCRVNKVEMSKNKIPYLVTHDGRTIRYPDPLIKVNDTIKVDLETGKAIDTIKFEIGNVCMIARGRNAGRVGIMQHIERHPGSFDIVSVKDGAGHIFATRLQNIFSMGHGTRAMVSLPKGKGIKLSILEEKA 231
            MEGIWAP+PS GPH  RECLPL++I+RNRLKYALT+ E   ICMQ+LVK+DGKVRTD+ +PAGFMDVVQI++SGDLFRLLY+ KGRFVLHR+ ++E  FKLCRV KV++S  KIPY+VTHDGRTIRYPDPLIK NDT+KVDL TGK ID IKFEIG +CMI RGRNAGRVG++QH+E+HPGSFD+++VKD AG +FATRL NIF +G   +  VSLPKGKGIKLSI+EE+A
Sbjct:   39 MEGIWAPRPSAGPHKLRECLPLILILRNRLKYALTLQEVKAICMQRLVKIDGKVRTDMGYPAGFMDVVQIERSGDLFRLLYDVKGRFVLHRVKEDEGSFKLCRVMKVDVSAKKIPYVVTHDGRTIRYPDPLIKANDTVKVDLATGKIIDHIKFEIGRLCMIQRGRNAGRVGVIQHVEKHPGSFDMITVKDAAGKVFATRLGNIFVIGDDKKPWVSLPKGKGIKLSIVEERA 269          
BLAST of mRNA_P-littoralis_Contig13.176.2 vs. uniprot
Match: W7TUQ1_9STRA (40S ribosomal protein S4 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TUQ1_9STRA)

HSP 1 Score: 348 bits (893), Expect = 6.800e-119
Identity = 167/235 (71.06%), Postives = 201/235 (85.53%), Query Frame = 0
Query:    1 MEGIWAPKPSPGPHLNRECLPLVIIIRNRLKYALTMSEANMICMQKLVKVDGKVRTDVNFPAGFMDVVQIQKSGDLFRLLYNTKGRFVLHRISD--EESKFKLCRVNKVEMSKNKIPYLVTHDGRTIRYPDPLIKVNDTIKVDLETGKAIDTIKFEIGNVCMIARGRNAGRVGIMQHIERHPGSFDIVSVKDGAGHIFATRLQNIFSMGHGTRAMVSLPKGKGIKLSILEEKAAK 233
            M+GI+AP+PS GPH  RE LPL++I+RNRLKYALT +EAN ICMQKLVKVDGKVRTD+NFPAGFMDV+ I+KSGD FRLLY+ KGRF L R+ +  EE  FKLCRVNK EMS NKIPY+VTHDGRTIRYPDPLIK++DT+KVD+ TGK +D IKF++GN+  + RG N GRVG++QHIERHPGSFDI++VKD  GH FATR QN+F +G G + MVSLPKGKGIKLSI+EE++A+
Sbjct:   23 MDGIFAPRPSTGPHKLRESLPLILILRNRLKYALTKAEANAICMQKLVKVDGKVRTDLNFPAGFMDVITIEKSGDEFRLLYDVKGRFYLQRLEEGSEERNFKLCRVNKNEMSANKIPYIVTHDGRTIRYPDPLIKMDDTVKVDIRTGKILDFIKFDLGNLVYLTRGHNTGRVGMIQHIERHPGSFDIITVKDAQGHTFATRRQNVFVIGQGNKPMVSLPKGKGIKLSIVEERSAR 257          
BLAST of mRNA_P-littoralis_Contig13.176.2 vs. uniprot
Match: A0A2D4CA31_PYTIN (40S ribosomal protein S4 n=3 Tax=Eukaryota TaxID=2759 RepID=A0A2D4CA31_PYTIN)

HSP 1 Score: 342 bits (877), Expect = 2.050e-116
Identity = 164/237 (69.20%), Postives = 195/237 (82.28%), Query Frame = 0
Query:    1 MEGIWAPKPSPGPHLNRECLPLVIIIRNRLKYALTMSEANMICMQKLVKVDGKVRTDVNFPAGFMDVVQIQKSGDLFRLLYNTKGRFVLHRISDEESKFKLCRVNKVEMSKNKIPYLVTHDGRTIRYPDPLIKVNDTIKVDLETGKAIDTIKFEIGNVCMIARGRNAGRVGIMQHIERHPGSFDIVSVKDGAGHIFATRLQNIFSMGHGTRAMVSLPKGKGIKLSILEEKAAKIKKA 237
            ++GIWAP+PS GPH  RECLPLVII+RNRLKYALT  E   ICM KLVKVD K+R D +FPAGFMDV+++ KSGD FRLLY+TKGRFVLHRI++EE K+KLC+V + E +K  IPY+ T+DGRTIRYPDPLIKVNDT+KVDLETGK +D IKFE GN+ M+  GRNAGRVGI+ HIERH GSF+I  +KD AGH FATRL N+F +G+ +R  VSLPKGKGIKLSILEE+  +  KA
Sbjct:   23 LDGIWAPRPSSGPHKLRECLPLVIILRNRLKYALTKKEVTAICMNKLVKVDNKIRVDPDFPAGFMDVIELPKSGDAFRLLYDTKGRFVLHRINNEEKKYKLCKVTRQEYTKKAIPYIATNDGRTIRYPDPLIKVNDTVKVDLETGKVVDFIKFETGNLVMVTGGRNAGRVGILHHIERHEGSFNIAHIKDSAGHAFATRLGNVFVIGNESRPSVSLPKGKGIKLSILEERQIRESKA 259          
BLAST of mRNA_P-littoralis_Contig13.176.2 vs. uniprot
Match: A0A5D6XRP7_9STRA (40S ribosomal protein S4 n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XRP7_9STRA)

HSP 1 Score: 340 bits (871), Expect = 1.270e-115
Identity = 165/239 (69.04%), Postives = 195/239 (81.59%), Query Frame = 0
Query:    1 MEGIWAPKPSPGPHLNRECLPLVIIIRNRLKYALTMSEANMICMQKLVKVDGKVRTDVNFPAGFMDVVQIQKSGDLFRLLYNTKGRFVLHRISDEESKFKLCRVNKVEMSKNKIPYLVTHDGRTIRYPDPLIKVNDTIKVDLETGKAIDTIKFEIGNVCMIARGRNAGRVGIMQHIERHPGSFDIVSVKDGAGHIFATRLQNIFSMGHGTRAMVSLPKGKGIKLSILEEKAAKIKKAQN 239
            ++GIWAP+PS GPH  RECLPLVII+RNRLKYALT  E  MIC+ K VKVDGKVR D NFPAGFMDVV++ KSGD FRLLY+TKGRFVLHR+S+EE K+KL +V + E +K  IPY+ T+DGRTIRYPDPLIKVNDT+K+DLETGK +D +K E GN+ MI RGRN GRVGI+ HIERH GSF+I  VKD AGH FATRL N+F +G  +R +VSLPKGKGIKLSI+EE A +  K +N
Sbjct:   17 LDGIWAPRPSSGPHKLRECLPLVIILRNRLKYALTKQEVMMICLHKQVKVDGKVRVDPNFPAGFMDVVELAKSGDQFRLLYDTKGRFVLHRVSNEEKKYKLAKVTRQEYTKKAIPYVATNDGRTIRYPDPLIKVNDTVKIDLETGKIVDFVKLEAGNMVMITRGRNTGRVGILHHIERHEGSFNIAHVKDSAGHDFATRLGNVFVIGSESRPLVSLPKGKGIKLSIIEELAIRENKNKN 255          
BLAST of mRNA_P-littoralis_Contig13.176.2 vs. uniprot
Match: F0WD75_9STRA (40S ribosomal protein S4 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WD75_9STRA)

HSP 1 Score: 336 bits (862), Expect = 3.660e-114
Identity = 157/239 (65.69%), Postives = 195/239 (81.59%), Query Frame = 0
Query:    1 MEGIWAPKPSPGPHLNRECLPLVIIIRNRLKYALTMSEANMICMQKLVKVDGKVRTDVNFPAGFMDVVQIQKSGDLFRLLYNTKGRFVLHRISDEESKFKLCRVNKVEMSKNKIPYLVTHDGRTIRYPDPLIKVNDTIKVDLETGKAIDTIKFEIGNVCMIARGRNAGRVGIMQHIERHPGSFDIVSVKDGAGHIFATRLQNIFSMGHGTRAMVSLPKGKGIKLSILEEKAAKIKKAQN 239
            ++G+WAP+PS GPH  RECLPL+II+RNRLKYALT  E  MICMQK VKVDGK+R D NFPAGFMD+V+I KSGD FRLLY+TKGRFVLHR++ EE K+KLC+V + E +K  IPY+ T+DGRTIRYPDPL+K NDT+K+DLETGK +D IKFE GN+ M+ RGRN G VG++  IERH GSF I  ++D  GH FATRL N+F++G+G+R  +SLPKGKGIKLSILEE++ + +K  N
Sbjct:   23 LDGVWAPRPSSGPHKLRECLPLIIILRNRLKYALTKQEVTMICMQKAVKVDGKIRVDPNFPAGFMDIVEIPKSGDQFRLLYDTKGRFVLHRVNHEEKKYKLCKVIRQEYTKKGIPYVATNDGRTIRYPDPLVKSNDTVKIDLETGKIVDFIKFETGNLVMVTRGRNTGIVGMLHQIERHEGSFSIARIRDSTGHEFATRLGNVFAIGNGSRPWISLPKGKGIKLSILEERSVREQKNLN 261          
BLAST of mRNA_P-littoralis_Contig13.176.2 vs. uniprot
Match: A0A421F6I5_9STRA (KOW domain-containing protein n=5 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421F6I5_9STRA)

HSP 1 Score: 341 bits (875), Expect = 1.460e-113
Identity = 165/239 (69.04%), Postives = 196/239 (82.01%), Query Frame = 0
Query:    1 MEGIWAPKPSPGPHLNRECLPLVIIIRNRLKYALTMSEANMICMQKLVKVDGKVRTDVNFPAGFMDVVQIQKSGDLFRLLYNTKGRFVLHRISDEESKFKLCRVNKVEMSKNKIPYLVTHDGRTIRYPDPLIKVNDTIKVDLETGKAIDTIKFEIGNVCMIARGRNAGRVGIMQHIERHPGSFDIVSVKDGAGHIFATRLQNIFSMGHGTRAMVSLPKGKGIKLSILEEKAAKIKKAQN 239
            ++GIWAP+PS GPH  RECLPL+II+RNRLKYALT  E  MICMQK VKVDGKVR D NFP+GFMDVV++ K+GD FRL+Y+TKGRFVLHRISDEE KFKL +V + E +K  IPY+ T DGRTIRYPDPLIKV DT+K+DLETGK +D IKFE+GN+  I RGRN+GRVGI+ HIERH GSF+I  VKD AG+ FATRL N+F++G   R  VSLPKGKGIKL+ILE++  + KKA N
Sbjct:  202 LDGIWAPRPSSGPHKLRECLPLIIILRNRLKYALTKQEVTMICMQKSVKVDGKVRVDPNFPSGFMDVVELPKTGDQFRLMYDTKGRFVLHRISDEEKKFKLAKVIRQEYTKKAIPYIATSDGRTIRYPDPLIKVGDTVKIDLETGKVVDHIKFEVGNLVTITRGRNSGRVGILHHIERHQGSFNIAHVKDSAGNDFATRLGNVFAVGKEARPWVSLPKGKGIKLNILEQRELREKKANN 440          
BLAST of mRNA_P-littoralis_Contig13.176.2 vs. uniprot
Match: M4BHJ4_HYAAE (40S ribosomal protein S4 n=21 Tax=Peronosporaceae TaxID=4777 RepID=M4BHJ4_HYAAE)

HSP 1 Score: 335 bits (858), Expect = 1.490e-113
Identity = 161/239 (67.36%), Postives = 196/239 (82.01%), Query Frame = 0
Query:    1 MEGIWAPKPSPGPHLNRECLPLVIIIRNRLKYALTMSEANMICMQKLVKVDGKVRTDVNFPAGFMDVVQIQKSGDLFRLLYNTKGRFVLHRISDEESKFKLCRVNKVEMSKNKIPYLVTHDGRTIRYPDPLIKVNDTIKVDLETGKAIDTIKFEIGNVCMIARGRNAGRVGIMQHIERHPGSFDIVSVKDGAGHIFATRLQNIFSMGHGTRAMVSLPKGKGIKLSILEEKAAKIKKAQN 239
            ++GIWAP+PS GPH  RECLPL+II+RNRLKYALT  E  MICMQK VKVDGKVR D +FPAGFMDVV++ K+ D FRLLY+TKGRFVLHR+SDEE K+KL +V + E +K  IPY+ T+DGRTIRYPDP+IKV DT+K+DLETGK +D IKFE+GN+  I RGRN+GRVGI+ HIERH GSF+I  VKD AG+ FATRL N+F +G  +R  VSLP+GKGIKL+ILE++  K K+A N
Sbjct:   23 LDGIWAPRPSSGPHKLRECLPLIIILRNRLKYALTKQEVTMICMQKSVKVDGKVRVDPDFPAGFMDVVELPKTDDQFRLLYDTKGRFVLHRVSDEEKKYKLAKVIRQEYTKKAIPYIATNDGRTIRYPDPVIKVGDTVKIDLETGKVVDHIKFEVGNLVTITRGRNSGRVGILHHIERHQGSFNIAHVKDSAGNDFATRLGNVFVVGKESRPWVSLPRGKGIKLNILEQRELKEKRANN 261          
BLAST of mRNA_P-littoralis_Contig13.176.2 vs. uniprot
Match: A0A067CQF7_SAPPC (40S ribosomal protein S4 n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CQF7_SAPPC)

HSP 1 Score: 334 bits (856), Expect = 3.210e-113
Identity = 162/237 (68.35%), Postives = 194/237 (81.86%), Query Frame = 0
Query:    1 MEGIWAPKPSPGPHLNRECLPLVIIIRNRLKYALTMSEANMICMQKLVKVDGKVRTDVNFPAGFMDVVQIQKSGDLFRLLYNTKGRFVLHRISDEESKFKLCRVNKVEMSKNKIPYLVTHDGRTIRYPDPLIKVNDTIKVDLETGKAIDTIKFEIGNVCMIARGRNAGRVGIMQHIERHPGSFDIVSVKDGAGHIFATRLQNIFSMGHGTRAMVSLPKGKGIKLSILEEKAAKIKKA 237
            ++GIWAP+PS GPH  RECLPL+IIIRNRLKYALT  E  MICMQKLVKVDGK R D NFPAGFMDVV+I KSGD+FRLLY+TKGRFVLHRI++EE K+KL +V + E +  +IPY+ T+DGRTIRY DPLIKVNDT+K+D+ETGK +D IKFE G + MI RGRNAGRVGI+ HIERH GSF+I  +KD  G  FATR  N+F++G   R  VSLPKGKG+KLSILEE++ + +KA
Sbjct:   23 LDGIWAPRPSSGPHKLRECLPLIIIIRNRLKYALTKQEVTMICMQKLVKVDGKTRVDPNFPAGFMDVVEITKSGDVFRLLYDTKGRFVLHRINEEEKKYKLAKVTRQEFTAKQIPYVATNDGRTIRYADPLIKVNDTVKIDIETGKVVDFIKFETGAMVMITRGRNAGRVGILHHIERHAGSFNIAHIKDTTGAEFATRQGNVFAVGKDGRPWVSLPKGKGVKLSILEERSMREQKA 259          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig13.176.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FLZ5_ECTSI9.340e-16897.0840S ribosomal protein S4 n=2 Tax=Ectocarpus TaxID=... [more]
A0A835ZEV0_9STRA8.420e-13276.1540S ribosomal protein S4 n=2 Tax=Tribonema minus T... [more]
A0A7S2WPT4_9STRA1.210e-12373.1640S ribosomal protein S4 n=1 Tax=Rhizochromulina m... [more]
W7TUQ1_9STRA6.800e-11971.0640S ribosomal protein S4 n=2 Tax=Monodopsidaceae T... [more]
A0A2D4CA31_PYTIN2.050e-11669.2040S ribosomal protein S4 n=3 Tax=Eukaryota TaxID=2... [more]
A0A5D6XRP7_9STRA1.270e-11569.0440S ribosomal protein S4 n=1 Tax=Pythium brassicum... [more]
F0WD75_9STRA3.660e-11465.6940S ribosomal protein S4 n=1 Tax=Albugo laibachii ... [more]
A0A421F6I5_9STRA1.460e-11369.04KOW domain-containing protein n=5 Tax=Phytophthora... [more]
M4BHJ4_HYAAE1.490e-11367.3640S ribosomal protein S4 n=21 Tax=Peronosporaceae ... [more]
A0A067CQF7_SAPPC3.210e-11368.3540S ribosomal protein S4 n=3 Tax=Saprolegniaceae T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005824KOWSMARTSM00739kow_9coord: 152..179
e-value: 0.0049
score: 26.1
IPR002942RNA-binding S4 domainSMARTSM00363s4_6coord: 21..84
e-value: 4.5E-5
score: 32.9
IPR002942RNA-binding S4 domainPFAMPF01479S4coord: 21..68
e-value: 1.2E-9
score: 37.7
IPR002942RNA-binding S4 domainCDDcd00165S4coord: 29..90
e-value: 2.59076E-6
score: 42.2366
IPR036986RNA-binding S4 domain superfamilyGENE3D3.10.290.10coord: 1..95
e-value: 7.3E-43
score: 147.3
IPR014722Ribosomal protein L2, domain 2GENE3D2.30.30.30coord: 153..223
e-value: 5.3E-30
score: 105.1
IPR000876Ribosomal protein S4ePIRSFPIRSF002116RPS4a_RPS4ecoord: 1..219
e-value: 8.8E-84
score: 278.4
IPR000876Ribosomal protein S4ePANTHERPTHR1158130S/40S RIBOSOMAL PROTEIN S4coord: 2..239
IPR03227740S ribosomal protein S4, C-terminal domainPFAMPF1612140S_S4_Ccoord: 190..236
e-value: 6.1E-20
score: 70.6
IPR013845Ribosomal protein S4e, central regionPFAMPF00900Ribosomal_S4ecoord: 74..146
e-value: 2.2E-33
score: 113.9
IPR013843Ribosomal protein S4e, N-terminalPFAMPF08071RS4NTcoord: 1..14
e-value: 1.3E-4
score: 22.0
IPR038237Ribosomal protein S4e, central domain superfamilyGENE3D2.40.50.740coord: 100..150
e-value: 7.0E-28
score: 98.1
NoneNo IPR availablePANTHERPTHR11581:SF040S RIBOSOMAL PROTEIN S4coord: 2..239
NoneNo IPR availablePROSITEPS50889S4coord: 20..92
score: 10.167418
IPR041982Ribosomal protein S4, KOW domainCDDcd06087KOW_RPS4coord: 153..207
e-value: 3.05006E-23
score: 86.8007

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig13contigP-littoralis_Contig13:922899..931414 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig13.176.2mRNA_P-littoralis_Contig13.176.2Pylaiella littoralis U1_48mRNAP-littoralis_Contig13 921626..931480 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig13.176.2 ID=prot_P-littoralis_Contig13.176.2|Name=mRNA_P-littoralis_Contig13.176.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=241bp
MEGIWAPKPSPGPHLNRECLPLVIIIRNRLKYALTMSEANMICMQKLVKV
DGKVRTDVNFPAGFMDVVQIQKSGDLFRLLYNTKGRFVLHRISDEESKFK
LCRVNKVEMSKNKIPYLVTHDGRTIRYPDPLIKVNDTIKVDLETGKAIDT
IKFEIGNVCMIARGRNAGRVGIMQHIERHPGSFDIVSVKDGAGHIFATRL
QNIFSMGHGTRAMVSLPKGKGIKLSILEEKAAKIKKAQNS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005824KOW
IPR002942S4_RNA-bd
IPR036986S4_RNA-bd_sf
IPR014722Rib_L2_dom2
IPR000876Ribosomal_S4e
IPR03227740S_S4_C
IPR013845Ribosomal_S4e_central_region
IPR013843Ribosomal_S4e_N
IPR038237Ribosomal_S4e_central_sf
IPR041982KOW_RPS4