prot_P-littoralis_Contig13.126.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig13.126.1
Unique Nameprot_P-littoralis_Contig13.126.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length63
Homology
[Close]
BLAST of mRNA_P-littoralis_Contig13.126.1 vs. uniprot
Match: D8LKS3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKS3_ECTSI)

HSP 1 Score: 95.1 bits (235), Expect = 1.380e-24
Identity = 49/57 (85.96%), Postives = 52/57 (91.23%), Query Frame = 0 
Query:    7 EGEVFFKGGVRRMLDERRRRLSGGSDTPSDASSTTDEDLDVQFIRVEKELKLKTKEL 63
            EGEV F GG+RR LDERRRRL GGSD PSDASSTTD+DLDVQFIRVEKEL+LKTKEL
Sbjct:    2 EGEVSFSGGIRRKLDERRRRLRGGSDNPSDASSTTDQDLDVQFIRVEKELELKTKEL 58
[Close]
BLAST of mRNA_P-littoralis_Contig13.126.1 vs. uniprot
Match: A0A6H5K2A3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2A3_9PHAE)

HSP 1 Score: 104 bits (259), Expect = 1.400e-24
Identity = 55/62 (88.71%), Postives = 57/62 (91.94%), Query Frame = 0 
Query:    2 TKKFKEGEVFFKGGVRRMLDERRRRLSGGSDTPSDASSTTDEDLDVQFIRVEKELKLKTKEL 63
            TKK KEGEV FKGG+RRMLDERR RLSGGSDTPSD SSTTDEDLDV FIRVEKELKL+TKEL
Sbjct:  873 TKKCKEGEVSFKGGIRRMLDERRGRLSGGSDTPSDISSTTDEDLDVHFIRVEKELKLRTKEL 934
[Close]
BLAST of mRNA_P-littoralis_Contig13.126.1 vs. uniprot
Match: D8LJ26_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ26_ECTSI)

HSP 1 Score: 79.7 bits (195), Expect = 3.480e-17
Identity = 43/45 (95.56%), Postives = 43/45 (95.56%), Query Frame = 0 
Query:   19 MLDERRRRLSGGSDTPSDASSTTDEDLDVQFIRVEKELKLKTKEL 63
            MLDERR RLSGGSDT SDASSTTDEDLDVQFIRVEKELKLKTKEL
Sbjct:    1 MLDERRLRLSGGSDTSSDASSTTDEDLDVQFIRVEKELKLKTKEL 45
[Close]
BLAST of mRNA_P-littoralis_Contig13.126.1 vs. uniprot
Match: A0A6H5JH42_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH42_9PHAE)

HSP 1 Score: 66.6 bits (161), Expect = 1.980e-11
Identity = 36/47 (76.60%), Postives = 38/47 (80.85%), Query Frame = 0 
Query:    1 MTKKFKEGEVFFKGGVRRMLDERRRRLSGGSDTPSDASSTTDEDLDV 47
            MTK  KEGEV     +RRMLDER RRLSGGS+TPSDASSTTDED DV
Sbjct:  274 MTKMSKEGEVSSNRDIRRMLDERPRRLSGGSNTPSDASSTTDEDRDV 320
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig13.126.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LKS3_ECTSI1.380e-2485.96Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K2A3_9PHAE1.400e-2488.71Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LJ26_ECTSI3.480e-1795.56Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JH42_9PHAE1.980e-1176.60Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 22..44

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig13contigP-littoralis_Contig13:607373..607561 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig13.126.1mRNA_P-littoralis_Contig13.126.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig13 607373..607561 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig13.126.1 ID=prot_P-littoralis_Contig13.126.1|Name=mRNA_P-littoralis_Contig13.126.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=63bp
MTKKFKEGEVFFKGGVRRMLDERRRRLSGGSDTPSDASSTTDEDLDVQFI
RVEKELKLKTKEL
back to top