prot_P-littoralis_Contig13.122.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig13.122.1
Unique Nameprot_P-littoralis_Contig13.122.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length237
Homology
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BLAST of mRNA_P-littoralis_Contig13.122.1 vs. uniprot
Match: A0A6H5K2Q9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2Q9_9PHAE)

HSP 1 Score: 194 bits (494), Expect = 3.800e-54
Identity = 121/249 (48.59%), Postives = 142/249 (57.03%), Query Frame = 0 
Query:    1 MFVPGTKPWVTTIFSVVRQNVFSQGLKGKQPPPLPPPRERPTAARGPSVASAASPA--------------VLVGQAFVHLKSDLMRGIGRSLSLPLSPECFRVDSLQTATPDRLPDGVTIRARFRPLSDATSKCGYINVVLWSGRAVGPTERPTRLFGVLAYGILFLYSKACSQKPPKARLPIYGASVWAKAALLQVLLRLRQPDDAGRTNVQIHATTLEEVTAWRTRLVSAATDDTPQARIPDALRRG 235
            +FVPGTKPWVT +F+VVRQ++  +  K K  P      +R  AA                          VLVGQA  HL +DL RG  R  SLPLS + F VD+LQ ATPD LP+GVTIRAR  P SD  SKCGYI+V   SGR   PTERP+R FGVLA G+L LYSKA SQKPP+ARL + GASVWAK A   V + L  PDDAGRT+ Q+              L    T   PQ ++P A   G
Sbjct:  510 IFVPGTKPWVTAVFTVVRQSIPHE-TKEKASPTQ---GKRGRAAXXXXXXXXXXXXXXXXXXXXXXXXXXVLVGQAHAHLNTDLCRGTSRHFSLPLSSQYFPVDTLQVATPDHLPEGVTIRARIGPFSDIASKCGYIHVTFSSGRFNAPTERPSRYFGVLASGVLRLYSKAYSQKPPRARLTLQGASVWAKKAARLVFVSLCTPDDAGRTDFQVG-------------LGLGGTSPLPQGKMPAAREVG 741
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BLAST of mRNA_P-littoralis_Contig13.122.1 vs. uniprot
Match: D7G162_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G162_ECTSI)

HSP 1 Score: 54.3 bits (129), Expect = 2.110e-5
Identity = 27/39 (69.23%), Postives = 29/39 (74.36%), Query Frame = 0 
Query:  125 VVLWSGRAVGPTERPTRLFGVLAYGILFLYSKACSQKPP 163
            V   SGR   PTERP+R FGVLA G+L LYSKA SQKPP
Sbjct:  160 VTFSSGRFNAPTERPSRYFGVLASGVLCLYSKAYSQKPP 198
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig13.122.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K2Q9_9PHAE3.800e-5448.59Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G162_ECTSI2.110e-569.23Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 25..47

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig13contigP-littoralis_Contig13:570366..577025 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig13.122.1mRNA_P-littoralis_Contig13.122.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig13 568278..577578 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig13.122.1 ID=prot_P-littoralis_Contig13.122.1|Name=mRNA_P-littoralis_Contig13.122.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=237bp
MFVPGTKPWVTTIFSVVRQNVFSQGLKGKQPPPLPPPRERPTAARGPSVA
SAASPAVLVGQAFVHLKSDLMRGIGRSLSLPLSPECFRVDSLQTATPDRL
PDGVTIRARFRPLSDATSKCGYINVVLWSGRAVGPTERPTRLFGVLAYGI
LFLYSKACSQKPPKARLPIYGASVWAKAALLQVLLRLRQPDDAGRTNVQI
HATTLEEVTAWRTRLVSAATDDTPQARIPDALRRGE*
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