mRNA_P-littoralis_Contig13.96.3 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig13.96.3
Unique NamemRNA_P-littoralis_Contig13.96.3
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
[Close]
BLAST of mRNA_P-littoralis_Contig13.96.3 vs. uniprot
Match: A0A6H5JP31_9PHAE (Peptidase A1 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JP31_9PHAE)

HSP 1 Score: 606 bits (1563), Expect = 2.650e-207
Identity = 312/431 (72.39%), Postives = 354/431 (82.13%), Query Frame = 2 
Query:   23 ARTVLMVLGSLLLVA--HHASAAVHRVKLAKRSNEEFVQAKLAQEAQEFRNGFQDHFREGPPEP-RHDEGVLDTAFLRGTSKLDEVLGGERAPHSHHHTMQHNLDKKGAGKIIVKDYQNAQYYGQVEIGTPPQSFNVIFDTGSANLWVAGSDCGMSCGIHHRFKADKSSTHTDDGRDFEITYASGPVSGELSVDTVTWAGMKLEGQTFAEVSDAKGLGLAYIIGKFDGIMGLAFDEISVEGVPTPFGRMVESGELDSPVFAFYLGDEKEGELIIGGTDPDHFLHDITYVPVSKKGYWQIEMDSVDVAGDSVTSVTSAILDSGTSLLVGPSEDVKEIASKVGAVQFINGEYLMPCSSELPALTFTIGGKEYTLSGDEYVMNAGNSEVCVLAIMGMDVPEPAGPLWILGDVFMRKYYTVFDYGNARIGFARST 1306
            A +VL VLGSLLL +   +A AAVHRVKL+KR ++EFV +KL        +       EG  EP R +EGVL  A LRG   +++VL  E             L+  G GK+IVKDYQNAQYYGQVEIGTPPQSF VIFDTGSANLWVAGS CG+SCG+H R+ A KSSTH +DGRDFEITYASGPVSG LS DTVTW G++L+ QTFAEV DAKGLGLA+I+GKFDGIMGLAFDEISVEGVPTPFGR+VE GELD  VFAFYLG++KEGELIIGGTDPDH+LH+I YVPV+KKGYWQI+MD+VDV+G SVTSV SAILDSGTSLLVGP EDVK+IASKVGA+ F+NGEYLMPCSS+LP LTFTIGGKEYTL GDEYV++AGN +VC+LAIMGMD+PEP GPLWILGDVFMRKYYTVFDYGNA+IG A ST
Sbjct:    4 ASSVLTVLGSLLLASTCQNAFAAVHRVKLSKRPDKEFVNSKL--------DKAHHRHHEGAEEPSRPEEGVLQ-ANLRGA--VEQVLMSE-------------LETSGEGKVIVKDYQNAQYYGQVEIGTPPQSFEVIFDTGSANLWVAGSKCGLSCGLHSRYAASKSSTHAEDGRDFEITYASGPVSGSLSADTVTWGGIQLKDQTFAEVQDAKGLGLAFILGKFDGIMGLAFDEISVEGVPTPFGRLVEEGELDDAVFAFYLGNQKEGELIIGGTDPDHYLHEINYVPVTKKGYWQIDMDNVDVSGSSVTSVKSAILDSGTSLLVGPKEDVKKIASKVGAISFMNGEYLMPCSSDLPPLTFTIGGKEYTLEGDEYVISAGNDKVCILAIMGMDIPEPMGPLWILGDVFMRKYYTVFDYGNAQIGLATST 410
[Close]
BLAST of mRNA_P-littoralis_Contig13.96.3 vs. uniprot
Match: A0A835YVZ8_9STRA (Aspartyl protease n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVZ8_9STRA)

HSP 1 Score: 376 bits (965), Expect = 3.090e-118
Identity = 188/330 (56.97%), Postives = 239/330 (72.42%), Query Frame = 2 
Query:  341 GKIIVKDYQNAQYYGQVEIGTPPQSFNVIFDTGSANLWVAGSDCGMSCGIHHRFKADKSSTHTDDGRDFEITYASGPVSGELSVDTVTWAGMKLEGQTFAEVSDAKGLGLAYIIGKFDGIMGLAFDEISVEGVPTPFGRMVESGELDSPVFAFYLG--DEKEGELIIGGTDPDHFLHDITYVPVSKKGYWQIEMDSVDVAG-----DSVTSVTSAILDSGTSLLVGPSEDVKEIASKVGAVQF-INGEYLMPCSSELPALTFTIGGKEYTLSGDEYVMNAGNSEVCVLAIMGMDVPEPAGPLWILGDVFMRKYYTVFDYGNARIGFARST 1306
            G IIVKDYQNAQYYG + +G   Q+F+VIFDTGS+NLWVA   C  SCG+HHR+ + KS T   +  DF I Y SGPVSG  S D +   G+ +EGQTFAEV+DA GLGLA++IGKFDGI+G+ FD ISV   PTPF +++  G L+S +FAFYLG  D K+GEL++GGTDP H+  DI +V +  + YW + +D V + G            +AI+DSGTSLL GP+ +V  +A +VGA++  IN EY++PC   LP LTFTI GK+Y L+GDEYV+NAGN  +C+LAIMG+DVP  AGP+WILGD FMRKYY+VFD  N R+GFARST
Sbjct:   67 GNIIVKDYQNAQYYGTITLGGN-QNFDVIFDTGSSNLWVASYKCWFSCGLHHRYNSKKSHTFVANNTDFNIQYGSGPVSGYFSTDDLDLGGLTVEGQTFAEVTDASGLGLAFMIGKFDGILGMGFDSISVANTPTPFQQLMAQGRLNSGMFAFYLGGADGKDGELVLGGTDPKHYTGDIVWVDLVSETYWTVGLDGVTLDGATYHASETAKAKAAIIDSGTSLLAGPTAEVAAMAQQVGAIKLPINNEYVIPCGMPLPTLTFTIDGKDYPLNGDEYVINAGNG-ICLLAIMGIDVP--AGPMWILGDTFMRKYYSVFDMENKRMGFARST 392
[Close]
BLAST of mRNA_P-littoralis_Contig13.96.3 vs. uniprot
Match: A0A3M6VQF1_9STRA (Peptidase A1 domain-containing protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VQF1_9STRA)

HSP 1 Score: 363 bits (931), Expect = 2.650e-113
Identity = 175/326 (53.68%), Postives = 232/326 (71.17%), Query Frame = 2 
Query:  332 KGAGKIIVKDYQNAQYYGQVEIGTPPQSFNVIFDTGSANLWVAGSDCGMSCGIHHRFKADKSSTHTDDGRDFEITYASGPVSGELSVDTVTWAGMKLEGQTFAEVSDAKGLGLAYIIGKFDGIMGLAFDEISVEGVPTPFGRMVESGELDSPVFAFYLGDEKEGELIIGGTDPDHFLHDITYVPVSKKGYWQIEMDSVDVAGDSVTSVTSAILDSGTSLLVGPSEDVKEIASKVGAVQFINGEYLMPCSSELPALTFTIGGKEYTLSGDEYVMNAGNSEVCVLAIMGMDVPEPAGPLWILGDVFMRKYYTVFDYGN----ARIGFA 1297
            +GA  +I++D+QNAQYYG + IG+PPQ F+VIFDTGS+NLWV     G     HH +  DKSST+  +G +F I Y SGPVSG LS D++   G+ +  Q FAEV+  KGLG AY +GKFDG+ GLAFD ISV+ + TPF RM+++G LD PVFAFYLGD K+GEL  GG D  H+  ++ YV V    YW +++D+V+  G+ +TSV  AI+DSGTSL+ GP + V ++A+ VGA +FI GEYL+ CS+  P ++F + GK YTL+ DEY + AG   +C+ A MG+D+P P GPLWILGDVFMRK+YTVFD+G      R+GFA
Sbjct:   65 QGAADVIIRDFQNAQYYGSISIGSPPQLFSVIFDTGSSNLWVPNRKFGS----HHVYDHDKSSTYKSNGTEFSIMYGSGPVSGFLSQDSLQLGGLTVTDQFFAEVNVTKGLGPAYYLGKFDGLFGLAFDAISVDHLKTPFHRMIQNGLLDEPVFAFYLGDRKDGELTFGGVDKSHYKGELEYVDVISVTYWSVKLDAVEAKGEKLTSVDKAIVDSGTSLIAGPKDQVAKLAALVGAHKFIMGEYLISCSAAAPDISFVLNGKSYTLTKDEYTLKAG--PICLFAFMGIDIPAPTGPLWILGDVFMRKHYTVFDWGTDSRKPRLGFA 384
[Close]
BLAST of mRNA_P-littoralis_Contig13.96.3 vs. uniprot
Match: W2R7X2_PHYPN (Peptidase A1 domain-containing protein n=13 Tax=Phytophthora TaxID=4783 RepID=W2R7X2_PHYPN)

HSP 1 Score: 360 bits (924), Expect = 2.920e-112
Identity = 195/423 (46.10%), Postives = 267/423 (63.12%), Query Frame = 2 
Query:   41 VLGSLLLVAHHASAAVHRVKLAKRSNEEFVQAKLAQEAQEFRNGFQDHFREGPPEPRHDEGVLDTAFLRGTSKLDEVLGGERAPHSHHHTMQHNLDKKGAGKIIVKDYQNAQYYGQVEIGTPPQSFNVIFDTGSANLWVAGSDCGMSCGIHHRFKADKSSTHTDDGRDFEITYASGPVSGELSVDTVTWAGMKLEGQTFAEVSDAKGLGLAYIIGKFDGIMGLAFDEISVEGVPTPFGRMVESGELDSPVFAFYLGDEKEGELIIGGTDPDHFLHDITYVPVSKKGYWQIEMDSVDVAGDSVTSVTSAILDSGTSLLVGPSEDVKEIASKVGAVQFINGEYLMPCSSELPALTFTIGGKEYTLSGDEYVMNAGNSEVCVLAIMGMDVPEPAGPLWILGDVFMRKYYTVFDYGN----ARIGFA 1297
            VL SLLL    +SAAV RV + KRS+++F+ + L                       HD   +             V+    A   +H   Q +++  G+  ++++D+QNAQYYG++ IGTPPQ F VIFDTGS+NLWV     G     H+ +  DKSST+  +G  F+I Y SGPVSG LS DT+   G+ +  Q FAEV+  KGLG AY +GKFDG+ GLAFD ISV+ + TPF RM++ G +D PVFAFYLGD K+GEL  GG D  H+  D+ YV V+   YW +++D+V+  G+ +T V  AI+DSGTSL+ GP + V ++A+ VGA +FI GEYL+ CS+  P ++F + GK YTL+ +EY + +G   +C+ A MG+D+P PAGPLWILGDVFMRK+YTVFD+G      R+GFA
Sbjct:    6 VLCSLLLAL--SSAAVLRVPMIKRSDDDFMSSLL-----------------------HDVHAMQRP----------VVWSPDASPLNHDEGQPSVE--GSANVVIRDFQNAQYYGEISIGTPPQPFAVIFDTGSSNLWVPDKKFGS----HNVYDHDKSSTYKPNGTAFDIMYGSGPVSGFLSQDTLELGGLTVPDQFFAEVNVTKGLGPAYYLGKFDGLFGLAFDTISVDHLKTPFHRMIQEGLIDEPVFAFYLGDHKDGELTFGGVDKAHYKGDLEYVDVTSATYWSVKLDAVETKGEKLTDVDKAIVDSGTSLIAGPKDQVAKLAALVGAHKFIMGEYLISCSAAAPDISFVLNGKSYTLTKEEYTLKSG--PICLFAFMGIDIPAPAGPLWILGDVFMRKHYTVFDWGTDSRKPRVGFA 385
[Close]
BLAST of mRNA_P-littoralis_Contig13.96.3 vs. uniprot
Match: A0A812QE57_SYMPI (Hypothetical protein (Fragment) n=2 Tax=Symbiodinium pilosum TaxID=2952 RepID=A0A812QE57_SYMPI)

HSP 1 Score: 356 bits (913), Expect = 7.350e-111
Identity = 175/337 (51.93%), Postives = 233/337 (69.14%), Query Frame = 2 
Query:  323 LDKKGAGKIIVKDY----------QNAQYYGQVEIGTPPQSFNVIFDTGSANLWVAGSDCGMSCGIHHRFKADKSSTHTDDGRDFEITYASGPVSGELSVDTVTWAGMKLEGQTFAEVSDAKGLGLAYIIGKFDGIMGLAFDEISVEGVPTPFGRMVESGELDSPVFAFYLGDEKEGELIIGGTDPDHFLHDITYVPVSKKGYWQIEMDSVDVAGDSVTSVTSAILDSGTSLLVGPSEDVKEIASKVGAVQFINGEYLMPCSSELPALTFTIGGKEYTLSGDEYVMNAGNSEVCVLAIMGMDVPEPAGPLWILGDVFMRKYYTVFDYGNARIGFARS 1303
            L  KG   +I+ DY          +NAQYYG++E+GTP Q   V+FDTGS+NLWV  +   +S   H+ +  DKSST+  +G  F I Y SGPVSG  S D VT   +KL+  TFAEV    GLGL Y +GKFDGI+GL +D ISV  V TP   +V SG+L  P+FAFYLG+ + GEL+ GG DP H+  D ++VP+S + YWQI MD+V + GD+V+SV SAI+DSGTSLL GP +DV +IA+K+GA   +  EY++ CS++LP LTFT+GGK+YTLS  + ++    S+ C+L + G+DVP P GPLWILGDVFMRK+Y  FD+G  R+GFA++
Sbjct:   31 LGAKGEDPVIIDDYMNLCGVEQLFKNAQYYGEIEVGTPGQKEMVVFDTGSSNLWVPNTKPFLSS--HNTYNHDKSSTYKKNGTTFAIQYGSGPVSGVFSADDVTIGDLKLKDYTFAEVDKTSGLGLGYRLGKFDGILGLGWDSISVGHVTTPMKALVASGQLPKPIFAFYLGNNQPGELLFGGVDPKHYTGDFSFVPLSSETYWQINMDAVKLGGDAVSSVKSAIVDSGTSLLAGPKDDVAKIAAKLGAKSILGKEYVVDCSAKLPDLTFTLGGKDYTLSQPDIILQQSGSQ-CILGLTGIDVPAPRGPLWILGDVFMRKFYVQFDWGQKRLGFAKA 364
[Close]
BLAST of mRNA_P-littoralis_Contig13.96.3 vs. uniprot
Match: A0A7S3HHM3_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HHM3_9STRA)

HSP 1 Score: 356 bits (914), Expect = 1.360e-110
Identity = 173/335 (51.64%), Postives = 236/335 (70.45%), Query Frame = 2 
Query:  311 MQHNLDKKGAGKIIVKDYQNAQYYGQVEIGTPPQSFNVIFDTGSANLWVAGSDCGMSCGIHHRFKADKSSTHTDDGRDFEITYASGPVSGELSVDTVTWAGMKLEGQTFAEVSDAKGLGLAYIIGKFDGIMGLAFDEISVEGVPTPFGRMVESGELDSPVFAFYLGD--EKEGELIIGGTDPDHFLHDITYVPVSKKGYWQIEMDSVDVAGDSVTSVTSAILDSGTSLLVGPSEDVKEIASKVGAVQFINGEYLMPCSSE-LPALTFTIGGKEYTLSGDEYVMNAGNSEVCVLAIMGMDVPEPAGPLWILGDVFMRKYYTVFDYGNARIGFARST 1306
            +++    K  G I++ DY+N+QYYGQ+ +GTP Q FNVIFDTGS++LWVA S+C  SCG H ++ + KSST+T +G  F+ITY SGPVSG  SVD + + G  ++ Q FAEV++A GLG AY +GKFDGI+G+AF  +SV  V TPF  +V  G +D+  FAFYL +  E +GEL++GGTDP H+   IT+VP+    YW+I +  + + G S TS T AI+DSGTS+L  PS+ V  IA ++G  + I GEY++PC+ +  P  TF I G  Y LS  +Y++  G  E+C+L ++GMD+PEP GPLWILGD+FMRKYYTVFD  N R+GFA +T
Sbjct:   67 IKNEFKVKQDGSIVINDYENSQYYGQIALGTPNQKFNVIFDTGSSDLWVASSNCDSSCGRHAKYNSAKSSTYTANGTSFDITYGSGPVSGYQSVDNLNFGGFVVKDQEFAEVTNAIGLGAAYKLGKFDGILGMAFGVLSVNHVTTPFDNLVAQGLIDNAQFAFYLSNSAEDKGELVLGGTDPAHYSGAITWVPLLAATYWEITLSGLTIDGVSYTSGTKAIVDSGTSILTAPSDVVASIAKQLGGKEIIAGEYMVPCNYDTFPDFTFLIDGNNYVLSARDYLLPDG--ELCLLGMIGMDIPEPTGPLWILGDIFMRKYYTVFDSANKRVGFALAT 399
[Close]
BLAST of mRNA_P-littoralis_Contig13.96.3 vs. uniprot
Match: M4BDC8_HYAAE (Peptidase A1 domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BDC8_HYAAE)

HSP 1 Score: 355 bits (910), Expect = 1.550e-110
Identity = 173/326 (53.07%), Postives = 226/326 (69.33%), Query Frame = 2 
Query:  332 KGAGKIIVKDYQNAQYYGQVEIGTPPQSFNVIFDTGSANLWVAGSDCGMSCGIHHRFKADKSSTHTDDGRDFEITYASGPVSGELSVDTVTWAGMKLEGQTFAEVSDAKGLGLAYIIGKFDGIMGLAFDEISVEGVPTPFGRMVESGELDSPVFAFYLGDEKEGELIIGGTDPDHFLHDITYVPVSKKGYWQIEMDSVDVAGDSVTSVTSAILDSGTSLLVGPSEDVKEIASKVGAVQFINGEYLMPCSSELPALTFTIGGKEYTLSGDEYVMNAGNSEVCVLAIMGMDVPEPAGPLWILGDVFMRKYYTVFDYGN----ARIGFA 1297
            +G G +IV+D+QNAQYYG + IG PPQSF VIFDTGS+NLWV     G     HH +  DKS T+  +G  F I Y SGPVSG LS DT+   G+ +  Q FAEV+  +GLG AY +GKFDG+ GLAFD ISV+ + TPF +M++ G LD PVFAFYLGD K+GEL  GG D  H+  + TYV V    YW +++D+V+  G+ +  V  AI+DSGTSL+ GP + V ++A+ VGA +FI GEYL+ C++  P ++F + GK YTL+ DEY +  G   +C+ A MG+D+P PAGPLWILGDVFMRK+YTVFD+G      R+GFA
Sbjct:   43 QGTGNVIVRDFQNAQYYGAISIGQPPQSFAVIFDTGSSNLWVPNKKFGS----HHVYDHDKSHTYKANGTSFNIKYGSGPVSGFLSQDTLELGGLSVPDQFFAEVNVTRGLGPAYYLGKFDGLFGLAFDSISVDHLKTPFHQMIQLGLLDEPVFAFYLGDRKDGELTFGGVDKAHYKGEFTYVDVISSTYWLVKLDAVETKGEKLMEVDKAIVDSGTSLIAGPKDQVAKLAALVGAHKFILGEYLISCTAAAPDISFVLDGKAYTLTKDEYTLKTG--PICLFAFMGIDIPAPAGPLWILGDVFMRKHYTVFDWGTDSRKPRVGFA 362
[Close]
BLAST of mRNA_P-littoralis_Contig13.96.3 vs. uniprot
Match: A0A8K1FH86_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FH86_PYTOL)

HSP 1 Score: 355 bits (910), Expect = 3.550e-110
Identity = 180/322 (55.90%), Postives = 230/322 (71.43%), Query Frame = 2 
Query:  347 IIVKDYQNAQYYGQVEIGTPPQSFNVIFDTGSANLWVAGSDCGMSCGIHHRFKADKSSTHTDDGRDFEITYASGPVSGELSVDTVTWAGMKLEGQTFAEVSDAKGLGLAYIIGKFDGIMGLAFDEISVEGVPTPFGRMVESGELDSPVFAFYLGDEKEGELIIGGTDPDHFLHDITYVPVSKKGYWQIEMDSVDVAGDSV-TSVTSAILDSGTSLLVGPSEDVKEIASKVGAVQFINGEYLMPCSSELPALTFTIGGKEYTLSGDEYVMNAGNSEVCVLAIMGMDVPEPAGPLWILGDVFMRKYYTVFDYGN----ARIGFA 1297
            ++++D+QNAQYYG+V+IGTP Q+F VIFDTGS+NLWV     G     HH +   KSST+  +G +F I Y SGPVSG +S D V    + L  Q FAEV+  KGLG AY +GKFDGI GLAFD ISV  + TPF RMVE+G LD PVFAFYLGD+K+GEL  GG D  HF  ++ YV V+   YW I++DSV VAGD   T V+ AI+DSGTSLL GP + V ++A  VGA +FI GEYL+ C+ + P ++F + GK YTL+ +EYV+ +G   +C+ A++G+D+P PAGPLWILGDVFMRKYYTVFD+G      R+GFA
Sbjct:   73 VVIRDFQNAQYYGEVQIGTPGQTFTVIFDTGSSNLWVPNRKFGS----HHIYDHAKSSTYKANGTEFNIMYGSGPVSGYVSQDAVKVGDIALADQFFAEVNVTKGLGPAYYMGKFDGIFGLAFDTISVNHLKTPFHRMVENGLLDEPVFAFYLGDQKDGELTFGGVDKSHFKGELEYVDVTSPTYWSIKLDSV-VAGDQTFTDVSKAIVDSGTSLLAGPKDQVAKLAKLVGAHKFIMGEYLISCTGQAPDISFVLNGKTYTLTKEEYVIKSG--PICLFAVIGIDIPAPAGPLWILGDVFMRKYYTVFDWGTDTRKPRVGFA 387
[Close]
BLAST of mRNA_P-littoralis_Contig13.96.3 vs. uniprot
Match: A0A6A3S1L8_9STRA (Peptidase A1 domain-containing protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3S1L8_9STRA)

HSP 1 Score: 352 bits (902), Expect = 6.440e-109
Identity = 171/328 (52.13%), Postives = 228/328 (69.51%), Query Frame = 2 
Query:  326 DKKGAGKIIVKDYQNAQYYGQVEIGTPPQSFNVIFDTGSANLWVAGSDCGMSCGIHHRFKADKSSTHTDDGRDFEITYASGPVSGELSVDTVTWAGMKLEGQTFAEVSDAKGLGLAYIIGKFDGIMGLAFDEISVEGVPTPFGRMVESGELDSPVFAFYLGDEKEGELIIGGTDPDHFLHDITYVPVSKKGYWQIEMDSVDVAGDSVTSVTSAILDSGTSLLVGPSEDVKEIASKVGAVQFINGEYLMPCSSELPALTFTIGGKEYTLSGDEYVMNAGNSEVCVLAIMGMDVPEPAGPLWILGDVFMRKYYTVFDYGN----ARIGFA 1297
            D +G   +I++D+QNAQYYG + +GTPPQ F VIFDTGS+NLWV     G     H  +  D+SS++  +G  F I Y SGPVSG LS DT+   G+ +  Q FAEV+  KGLG AY +GKFDG+ GLAFD ISV+ + TPF RMV+ G LD PVFAFYLGD+K+GEL  GG D  H+  ++ YV V+   YW +++D+V+  G  +  V  AI+DSGTSL+ GP + V ++A+ VGA +FI GEYL+ C++  P ++F + GK+YTL+ DEY +  G   +C+ A MG+D+P PAGPLWILGDVFMRK+YTVFD+G      R+GFA
Sbjct:   72 DLQGTANVIIRDFQNAQYYGAISLGTPPQPFAVIFDTGSSNLWVPDKKFGS----HSVYDHDQSSSYKANGTVFAIMYGSGPVSGFLSQDTLALGGLTVADQFFAEVNVTKGLGPAYYLGKFDGLFGLAFDAISVDHLKTPFHRMVQQGLLDEPVFAFYLGDQKDGELTFGGVDKAHYKGELEYVDVTSATYWSVKLDAVEADGQQLADVNKAIVDSGTSLIAGPKDQVAKLAALVGAHKFIMGEYLISCTAVAPDISFVLNGKKYTLTKDEYTLKTG--PICLFAFMGIDIPAPAGPLWILGDVFMRKHYTVFDWGTDSRKPRVGFA 393
[Close]
BLAST of mRNA_P-littoralis_Contig13.96.3 vs. uniprot
Match: A0A2D4C703_PYTIN (Aspartic protease n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C703_PYTIN)

HSP 1 Score: 348 bits (892), Expect = 1.040e-107
Identity = 178/332 (53.61%), Postives = 228/332 (68.67%), Query Frame = 2 
Query:  320 NLDKKGAGKIIVKDYQNAQYYGQVEIGTPPQSFNVIFDTGSANLWVAGSDCGMSCGIHHRFKADKSSTHTDDGRDFEITYASGPVSGELSVDTVTWAGMKLEGQTFAEVSDAKGLGLAYIIGKFDGIMGLAFDEISVEGVPTPFGRMVESGELDSPVFAFYLGDEKEGELIIGGTDPDHFLHDITYVPVSKKGYWQIEMDSVDVAGDSVTSVTSAILDSGTSLLVGPSEDVKEIASKVGAVQFINGEYLMPCSSELPALTFTIGGKEYTLSGDEYVMNAGNSEVCVLAIMGMDVPEPAGPLWILGDVFMRKYYTVFDYGN----ARIGFARS 1303
            +L+  G   ++++D+QNAQYYG+V++GTP Q F VIFDTGS+NLWV     G     HH +   KSS++  +G  F+I Y SGPVSG +S D +T   + +E Q FAEV+  KGLG AY +GKFDGI GLAFD ISV  + TPF RMV+ G LD PVFAFYLG++ +GEL  GG D  HF  ++TYV V+   YW I +DSV      ++ V  AI+DSGTSLL GP + V ++A  VGA +FI GEYL+ C+   P +TF IGGK YTL+ DEY++   N  +C+ A MG+D+P PAGPLWILGDVFMRKYYTVFD+G      RIGFA +
Sbjct:   53 SLNGGGHTNVVIRDFQNAQYYGEVQLGTPGQRFTVIFDTGSSNLWVPNRKFGS----HHVYDHAKSSSYKANGTAFDIMYGSGPVSGFISQDRLTVGELCVENQFFAEVNVTKGLGPAYYLGKFDGIFGLAFDTISVAHLTTPFHRMVQDGLLDEPVFAFYLGNQXDGELTFGG-DEGHFKGELTYVDVTSPTYWSIALDSVAAGDKKMSGVHKAIVDSGTSLLAGPKDQVAQLAKAVGAHKFIMGEYLISCTDPAPDITFQIGGKAYTLTKDEYIIK--NGPICLWAFMGIDIPAPAGPLWILGDVFMRKYYTVFDWGTDSRKPRIGFAEA 377
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig13.96.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JP31_9PHAE2.650e-20772.39Peptidase A1 domain-containing protein n=2 Tax=Ect... [more]
A0A835YVZ8_9STRA3.090e-11856.97Aspartyl protease n=1 Tax=Tribonema minus TaxID=30... [more]
A0A3M6VQF1_9STRA2.650e-11353.68Peptidase A1 domain-containing protein n=2 Tax=Per... [more]
W2R7X2_PHYPN2.920e-11246.10Peptidase A1 domain-containing protein n=13 Tax=Ph... [more]
A0A812QE57_SYMPI7.350e-11151.93Hypothetical protein (Fragment) n=2 Tax=Symbiodini... [more]
A0A7S3HHM3_9STRA1.360e-11051.64Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
M4BDC8_HYAAE1.550e-11053.07Peptidase A1 domain-containing protein n=1 Tax=Hya... [more]
A0A8K1FH86_PYTOL3.550e-11055.90Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A6A3S1L8_9STRA6.440e-10952.13Peptidase A1 domain-containing protein n=4 Tax=Phy... [more]
A0A2D4C703_PYTIN1.040e-10753.61Aspartic protease n=1 Tax=Pythium insidiosum TaxID... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig13contigP-littoralis_Contig13:440082..448508 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FLX5
Preferred nameNAPSA
PFAMsAsp
Model size2888
Max annot lvl2759|Eukaryota
KEGG koko:K01379,ko:K01381,ko:K01382,ko:K06883
KEGG Pathwayko04071,ko04138,ko04140,ko04142,ko04210,ko04915,ko05152,map04071,map04138,map04140,map04142,map04210,map04915,map05152
Hectar predicted targeting categorysignal peptide
GOsGO:0003674,GO:0003824,GO:0004175,GO:0004190,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0009056,GO:0009057,GO:0016787,GO:0019538,GO:0030163,GO:0043170,GO:0044238,GO:0070001,GO:0070011,GO:0071704,GO:0140096,GO:1901564,GO:1901565,GO:1901575
Exons10
Evalue3.34e-220
EggNOG OGsKOG1339@1|root,KOG1339@2759|Eukaryota
Ec32 ortholog descriptionaspartyl protease
Ec32 orthologEc-22_000090.1
EC3.4.23.25,3.4.23.34,3.4.23.5
Descriptionaspartic-type endopeptidase activity
Cds size1290
COG categoryM
BRITEko00000,ko00001,ko01000,ko01002,ko04147
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig13.96.3prot_P-littoralis_Contig13.96.3Pylaiella littoralis U1_48polypeptideP-littoralis_Contig13 441661..448489 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789583.1296976-UTR-P-littoralis_Contig13:440081..4416601680789583.1296976-UTR-P-littoralis_Contig13:440081..441660Pylaiella littoralis U1_48UTRP-littoralis_Contig13 440082..441660 -
1680789583.2654097-UTR-P-littoralis_Contig13:448489..4485081680789583.2654097-UTR-P-littoralis_Contig13:448489..448508Pylaiella littoralis U1_48UTRP-littoralis_Contig13 448490..448508 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789583.1427763-CDS-P-littoralis_Contig13:441660..4418521680789583.1427763-CDS-P-littoralis_Contig13:441660..441852Pylaiella littoralis U1_48CDSP-littoralis_Contig13 441661..441852 -
1680789583.1536794-CDS-P-littoralis_Contig13:442476..4425601680789583.1536794-CDS-P-littoralis_Contig13:442476..442560Pylaiella littoralis U1_48CDSP-littoralis_Contig13 442477..442560 -
1680789583.164205-CDS-P-littoralis_Contig13:443003..4431631680789583.164205-CDS-P-littoralis_Contig13:443003..443163Pylaiella littoralis U1_48CDSP-littoralis_Contig13 443004..443163 -
1680789583.1779046-CDS-P-littoralis_Contig13:443665..4437511680789583.1779046-CDS-P-littoralis_Contig13:443665..443751Pylaiella littoralis U1_48CDSP-littoralis_Contig13 443666..443751 -
1680789583.1895351-CDS-P-littoralis_Contig13:444610..4447541680789583.1895351-CDS-P-littoralis_Contig13:444610..444754Pylaiella littoralis U1_48CDSP-littoralis_Contig13 444611..444754 -
1680789583.2019358-CDS-P-littoralis_Contig13:444924..4450351680789583.2019358-CDS-P-littoralis_Contig13:444924..445035Pylaiella littoralis U1_48CDSP-littoralis_Contig13 444925..445035 -
1680789583.2143238-CDS-P-littoralis_Contig13:445459..4456031680789583.2143238-CDS-P-littoralis_Contig13:445459..445603Pylaiella littoralis U1_48CDSP-littoralis_Contig13 445460..445603 -
1680789583.2277806-CDS-P-littoralis_Contig13:445895..4460001680789583.2277806-CDS-P-littoralis_Contig13:445895..446000Pylaiella littoralis U1_48CDSP-littoralis_Contig13 445896..446000 -
1680789583.2381022-CDS-P-littoralis_Contig13:446558..4466311680789583.2381022-CDS-P-littoralis_Contig13:446558..446631Pylaiella littoralis U1_48CDSP-littoralis_Contig13 446559..446631 -
1680789583.2486758-CDS-P-littoralis_Contig13:448298..4484891680789583.2486758-CDS-P-littoralis_Contig13:448298..448489Pylaiella littoralis U1_48CDSP-littoralis_Contig13 448299..448489 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig13.96.3

>prot_P-littoralis_Contig13.96.3 ID=prot_P-littoralis_Contig13.96.3|Name=mRNA_P-littoralis_Contig13.96.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=430bp
MARTVLMVLGSLLLVAHHASAAVHRVKLAKRSNEEFVQAKLAQEAQEFRN
GFQDHFREGPPEPRHDEGVLDTAFLRGTSKLDEVLGGERAPHSHHHTMQH
NLDKKGAGKIIVKDYQNAQYYGQVEIGTPPQSFNVIFDTGSANLWVAGSD
CGMSCGIHHRFKADKSSTHTDDGRDFEITYASGPVSGELSVDTVTWAGMK
LEGQTFAEVSDAKGLGLAYIIGKFDGIMGLAFDEISVEGVPTPFGRMVES
GELDSPVFAFYLGDEKEGELIIGGTDPDHFLHDITYVPVSKKGYWQIEMD
SVDVAGDSVTSVTSAILDSGTSLLVGPSEDVKEIASKVGAVQFINGEYLM
PCSSELPALTFTIGGKEYTLSGDEYVMNAGNSEVCVLAIMGMDVPEPAGP
LWILGDVFMRKYYTVFDYGNARIGFARST*
back to top

mRNA from alignment at P-littoralis_Contig13:440082..448508-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig13.96.3 ID=mRNA_P-littoralis_Contig13.96.3|Name=mRNA_P-littoralis_Contig13.96.3|organism=Pylaiella littoralis U1_48|type=mRNA|length=8427bp|location=Sequence derived from alignment at P-littoralis_Contig13:440082..448508- (Pylaiella littoralis U1_48)
ATCGTATACGAAGTACATCATGGCTCGTACGGTGTTGATGGTGCTGGGAT
CGCTGCTGCTGGTGGCGCATCACGCCTCCGCGGCCGTGCACCGCGTGAAG
CTGGCGAAGCGCTCGAACGAGGAGTTCGTACAGGCCAAGCTCGCTCAGGA
AGCCCAAGAATTCCGAAACGGATTCCAAGACCACTTCCGCGAAGGCCCGC
CTGAGCCCAGGTGAAAAAACACAAATTGAACGCACCTTATGTTCTTGGTG
ATACATGCTCGTTCGAATATTTGGGGTGCTGTCTACCGATTGGATTCAAG
GTGAGGCACACGTGACGTGCGTGATGACAACACGATGAATTATGGAAAGT
ACACCCATCATACTTCAGTGTCATATCATACGAAAATGTCGCGCATCATA
CACATACATACCATACGAAAATATACAGCCAAGCACGAAGTGTATCCATG
TTGATATGTTTTTTTATACCGATTTCTGTTTTTTTGACTGTTGCCCACAC
CCCTCTTCACTTCCTTCTCGTGTGGTACATCTTTTGTCTCATCGTCCGAG
AATATCATAGTAACCAGACTGTGTATCTCCTTTGTGCGATCATAGTTCTC
TGTAGACTTATCCTGCTCAGCTTGCTGCTGCAGCTTGGCCGAGGACGAAG
CTCCCAAACAAACGTTGCCGAGAAGACAAAGCAAAGCTTTCAGCAAGCTT
TCCAGTATTGTTAGCCGCGGACAGAACGTTTTCCCTTGACTCTGCCGTAC
GACCACGAAGAGGCACTCGTGCGCTATCATACCGCTGGTGATCCGAGACA
GCACAATCGTGTTGTCCAACAGACTGAGCTTCTTCGTCCATTTCTGAAAG
CGGGGGGGGGGGGGGGGGGCAGCAACACTTCGCAGCCGGAAGTATACGTA
CTTCCCTTTGTGTGTCTAAATATGAAAAAGTCATCACTTGTGACTTTTTC
GGTCATTGTTCATCTTTGGGTGCGGGTTGTTGGACGGAGCACTCGTGAAA
AAAGGGAAATAGGTGTCGTGCCGGGTGCATATCATAGCTGCTTGTTTCTC
CAAGATAGGAGTGGCATGTGTTGCGGTGACGGTGAATCAAGACGTGCGTG
GTAGCTGGGACCGGTGGCGTGTCGCGGTGCCGTTGACGTAGGCTGCTTCT
GTCCCAGTACTGGTTTGTCATAGCCCGACGTCCACGTCATTATGAAGGGC
ATGTACTCACGCTGCACGGCAATATTGCTGTAGGATGCCTGATATGTACG
GCACCAATGCTGCAGGATGCACAGAAGGTGTTTATCATATTTCCTGTACA
ACGAATGTACGGTATTATTGCTGTGTATGTATGTACCCCACTAACGCTGT
AGAGTAGGTGCGGCACTCTGCGAGTTACGCATCAAACTGTTGCTGCAGGA
TGTGCTCACGGCACTATTTTTTGTCAGATGTACGTCAGGCTTTGTGCTTG
TTCGATCGCCATTGTTTTCAGTGCAGCTCTACAGCAGTGGTATGAGCAGG
GAGACAGGTGCAGGCAGCAGCAAGGGCTTGCTGTGCGTTTTTGTCGAGCA
GGCAGCAGACCATAATTGTTCCTTCCGTTCCTCTCTCTCTCTCTCTCTCT
CTCTCTCTCTCTCTCTCTCTCTCTTTCTGTTTCCTTGCGCCGCCCGCCTC
AACAACACGCCCTCCGCACTAGTGCTTCCTGCTCATCTGAGCATCTGAAG
TATTTCGCGGCGAGGTCAACATTTTGAGTGAAAAACTCTACAGCATCAGA
GCAGTAACGCCCACGGAGTTCAGGGAGAGCTATAAATCGCCCCGTCCTCG
AAGTTTTACAAACCTGTCACAATTCCTCCAAAAGACACCAACATGAGCCC
CCCCCCCCTTGGATTTGTTATTTCCAGGCACGATGAGGGGGTCCTCGACA
CGGCGTTCCTCCGCGGGACCTCAAAACTCGATGAAGTTCTCGGGGGCGAG
GTGAACTTGGTTTTCTCTTGCAAGAATTCGCTTCTGCGTGCATCATTGTC
AGTGTGGTGATTGCATAACGTGGGTTTTATTCCAAGTCTGTCGGTACAAG
GTAGGCAAGGCATGCCTGACGAGGTGGTGGCCGCTGGGAGGTGACCGCAT
ATGCAGCACGAGTTCCCTCTCTTTGTGCTGTCTCTCTTTCTCTTTACTGA
GTGCGTCTCTTGTATGTTACCCGGTGCTCGGTGCTGCTGTAATTGTGTCT
TGCCTGATCGTGTCTGTCCTTGATGTACTCCGCGACGCCACGCGCATTGA
AGCGCGACCGGTGTGTTTTTTCGCCTGTTTTTCGTGTGTGTGTGTGTTTT
TTTGTGTTTTTCGTGCCATCTGTCACTCGTGCTCTGCTCGGGCTTTCTAT
CTTACCTCACTGCGTTCTCTCTCCCCCTGTTCCACCCCCCCCCCTCTTGG
TCTCCATGCATCGCTCTCTGTCTCTTCTTCGATGTAACTTGTCGTTTTTT
CTTCTATCCCTACCCCTCCCCCCCCCCTTCCCGTCTCTTGTCCCTTCTTT
CTCGGTAGCGTGCACCCCACTCACACCATCACACGATGCAGCACAACCTG
GACAAGAAGGGAGCTGGCAAGATCATCGTCAAGGACTACCAGAACGCTCA
GTACTACGGACAGGTATTACAACGGTTCTCCACATCGCACACACTCGGTA
TCACATGCAGCACGAATCATGTCGTGCAAGTACTGCTCTTGAAAGCCCTG
CAGCAGCAACCTCACATAATACCCGGAATCTTCCGGCATCATCTTTGACA
CCAGTATCATAACAGTACCGCAGACCCCAACCCTAAGCCTGGTGCTAACT
AACCCCGACTAGGAAGCCCCAAACTCGAATTTATCCTCCTGTCCTCGGAT
GATATGGCATATCACATCATACATTCCCCATTATGATTTACTTCGGACAC
GACAGGTGGAGATCGGCACGCCGCCCCAGTCGTTCAACGTAATCTTCGAC
ACGGGAAGCGCCAACCTGTGGGTGGCGGGGAGCGACTGCGGAATGTCGTG
CGGCATTCACCACCGCTTCAAGGCAGACAAGAGCTCCACCCACACTGACG
TAGGTGTTGTGTTGGCGTTCGTGGTGGTGGTAGTGGTGGGGTGCGGTGGC
GGTAGCGTTCTGGTCGTGCCTTCGGTGGCGGTTGTTTTCGTTTTATTCGT
TGTTGGTGTTGCTTGCGCGTTCTGGTGTCTGCCACACGATGGCCACCACT
TCGCTGATAGATCGCGTGCGTCTCCGGTGTCTGCTCAAAAGCCTCTAAAA
TCGTGCATTCATGGAAGCATCTGCGTCACTCACACTTATCGGTCTCTCAG
TTTACACTTGCTGATCTCTCGTTTACACTGATTGATCCCTCATTTATACT
TTTCGATCCCTCATTTATACTTTTCGATCCCTCATTTTTAGTTTTCGATC
TCTCATGTACACTTCTTGATCTCTCTTCTTCTTTGTGTACGTCCTTACTT
TCATTTCTTTATTGTTTCTACAGGACGGGCGAGATTTCGAGATAACGTAC
GCCAGCGGCCCCGTGAGCGGCGAGCTCTCGGTCGACACCGTTACGTGGGC
AGGCATGAAGCTCGAGGGACAGACCTTCGCCGAGGTACCCTTAACAAACC
CAGCTATATCACCAATGTGTCTGCAGTATCTGCGAGTATACATCATATCG
TACTCGTGTCCTACATCGCGATTGAGGGGTGTCGATCGCGATCGAAGAGT
GCCTCTAAAATCTTGTGACTCATTTTTATCATAATCCGACCCTGGTGTCC
AAAGGTCAGTGACGCCAAGGGTCTCGGTCTCGCCTACATCATCGGCAAGT
TCGACGGCATCATGGGCCTCGCGTTCGATGAGATCAGTGTTGAGGGAGTT
CCTACGCCTTTCGGAAGGATGGTGGAGTCCGGGGAGCTGGACAGCCCGGT
ATGTTTATTTCTTCATCTTGTTTACTAGGGACCTAGGGCAAAAGGAAGTC
TGATTTTGCCAAAGTAAAACTCTTGGTATAAGTCGAAGATGTCAAAAATA
TAAAAATATCGCGCGGAAATTATAATTTCCAGTTCAATAGAAATTCGAGA
AGAATCAAAAGAGTTTGCGAACGAAGTTATTTTCGTAGGACCCACACCCA
TACACCTCACACACTGCTGCATGTGAGGCAACACCACGAGTCTTGCGCCT
GTACTAATCGTGGATTTTGCCGGATCAGGCGAAGGAAACGCGACTTCAAG
AGGCATGGCAGCAGGGATGGGGCCAGCAGGGGGTGATCCATCTGTGATAG
CAGCCGCGGTCGCCAGTAGTAGTATCGATGCATGCCGTTGCCCGCCTCCT
CCTCCTCCTCCTCCTCCTCCTCGCCTAGATTGGTCTTCCGCGGCGACACA
CATGGCCATCGCCTGCCGCAACTGCAGCAGAACCTGATCCGCACACGCTC
CCCCGCGTAGAGTTCACCGCAGCGCCGATTGATTCTAACAACTCCTGGTG
CTTCGGCCGCCTGGTCGTCACCAATGCCTCTCATGTCTGACGCACGGTTG
CTCCCTTTTTGCCCGGTGGGGTGCGCACACTTCCGAGTCTACTCTCCCCC
TACCGTTCCCCTCTCTCCCGCGTCGAGGAAGCCTATTTTTCTCTTTCTAT
CGATGGCGTCCTTGCGCGTTTTGTTGTGCTATATAACTCGTAGTTCTCGT
TTCGTAGTTGATCGATCGATCGCGTCTATTCTGTGAGCGAGCGGTGCGTG
AGTTGTCATAGTCCCCTTCCGCTCTCGCTGTTGACCTCTCGTTCCTCGAC
TTTTCAGGTGTTCGCGTTTTACCTGGGCGACGAGAAGGAGGGGGAGTTGA
TCATCGGCGGTACCGACCCGGACCACTTCCTCCATGACATCACGTAAGGG
GGTGGGGATACGAGGGAAAAGCGAAGAGACCGAGCCAACATTCGCGTCCC
GCTTCATGCTGATGTTGCTGCTCCGAACAAAAATTGAAGGCGCAGCAATC
AATGATACAGTCGATGTTTCATCAGAGCTATGTAACAACATGAATGTATG
TATCACAAATACTGCTGTACTTGGTTATTATACCAAAAAATCATACCCTG
GGAATGAGAGGGACACGAATTATGTCGTGATTATTACACCCAATGTAAAA
GAGGTCCCCATGATTGCTTCCAATTCACGGAATTCAGGTACGTCGTGCTC
AAGACTCGTGCGACTTTTGGGGTCAGGGAAAAGCAACTGTACGAGTAGGA
GCTTTGCAGAAACATCAGACCGCAAGATCGGCGTCGCTGACCCCCAGTTC
TCTGTCCCCTCGACCCTTTGTTTTCGTCTCTGCTGATGTATACTCATGCA
CAAATGGTGTCGTGGGTGTTTTTGCGCTGCTGTTGACCTGGCCAGCTACG
TGCCCGTGTCGAAGAAGGGCTACTGGCAGATCGAGATGGACAGCGTCGAC
GTGGCCGGAGATTCGGTGACCTCCGTGACGTCGGCCATCCTCGACTCGGG
CACGTCCCTCCTCGTCGGACCCTCGGAAGACGTCAAGGAGATCGCTAGCA
AAGTGGTGCGTGCTTGTGTGCGTGTGTGTGTGCGCGCGACCGTGTCTTGT
TCGTGGCGCGTGAGAGCAGTCGCTTCGCTTTCTCGATACAAGGTTCTGTT
TTTTGTTCTCTTGAAAAAGCGTGTCTCGCCGTTGACCATTATTCTGGCAC
ATGCATGCACGTTTGCCGGCATCCTTGCCGAGCGAGTCTCATGACCCTCG
GGGGCTCTCCCACTCAAATTAAGTTACGCTTCCAGCCATGAAAAGCTCGG
CACTAAAATCGTCCGGTCTACAGCAGTACGCGGAACGTCGAACGCCTCGA
AATTGAAACCCGAGAAGCTTTGTCTTGGCGATCGAACAACGTGTCTTGCA
CGCGGGGGACCCACGCGTTTGTGACGGTCCCATTGTCTCTTTTGTCTCCA
TTCGATTCCTTCCTCGTACGCGTTTTTTTTTCGTTTTTCATGTTGCAGGG
TGCGGTCCAATTCATTAACGGAGAGTACCTCATGCCCTGCAGCAGCGAGC
TCCCTGCGCTAACCTTCACCATCGGCGGAAAGGTGTGAAGAATGCCTGAG
AAAGTTTCCTCCGGACGGTTTTGCAAATAGTAGTTCGTGTCTTGCGTTAT
GGTTTGCCGCTCACCGTCAAGTAGCTTTATTGGCACCGCCCTATATATAG
AATACGTGCTTTGTTGACCTTCCTCCTGTTTGACCCCTGCTGGTGCACTC
TCACATGTATATATAAACGGAAGAGCGAAGACTGGCCTTTATGAAATATC
GGAGACACACTCACACGCACTCACTAATTTTGTCACGCGCTGACGCTTTC
TGATTGGCTGTCTGACCTGCCGTATCGAACTACCGAACAGGAAGAAAAAC
ACGTGGATAACACTGTGTTTCGCGTGGAAATATGTAATATTGTGTTCGAA
TGGACACGACAAAGGACCTGTATTCCGTTTTTATCGTCTTTCTCGGACAG
GAGTACACGCTTAAGGTGGATGACAATTCCTGTGGAAATCTGAAGCGGAA
CTCCATGTTTGAACGAAAACTGTTCCTTTTTATCATCTTTCTCGTGCAGG
AGTACACGCTTATGGTGGACACAATTTTTCGTGTGGAAATCTGAATCTTG
AGTTTGGTGTTTGAACGAACACTGCTCCCCCTTTTTGTTTTTTCTTCCCC
GCGCAGGAGTACACACTTTCAGGCGACGAATACGTCATGAACGCCGGAAA
CAGCGAGGTCTGCGTCCTGGCCATCATGGGAATGGACGTCCCCGAGCCCG
CCGGCCCTCTTTGGATCCTCGGCGACGTCTTCATGCGCAAGTACTACACG
GTGTTCGACTACGGCAACGCGCGGATTGGGTTCGCCCGCTCCACGTAGAC
GGACGTTTCACCCAGACGGACACACGGGCAGACACCTTCAGTCCATCCGT
TCTCAAAAAGAGACATCTGCTCTCTTCGATGGACGTGGTGGACTTTTTGC
TAAAAAAAAAATAACTGATATGATAGGACACTAGAAGAAGGCGGTACCGG
GTTGGCGTTGGAAGATAACACGCCAACCAACGGTGGTGCGTCTTGTCAAG
AGCTGTATCATACGTTCGCAGCACGGTAGGGAGGCGATCGCCGGTCGCTC
GCAGTTAAAGCCGCGCAGCTCGGTTCTGCGTATTGGATTTTCCCTTCGCA
CGTGGAATGTTGCGTTGTGAGGCAGTTAAGGTTGGTTGCTGTTGCCTGTT
TTACGTCTCCGTGTAAAGAGAGCCTTTTCTGTTTTTTTTTTCGTAAGGGA
CGGGTAAGAAGGAAGGGAGGAAAGCGCACCAGGCGCTGCTGTATCTACGC
CAATTTTTCTTTTATGTTTTCAGTCCAGAGCGAGCATGCCGCGCCTTGCC
GCAGCTCATGACGTTGCTTGCCACCAAGGCAGCTTTGTGTATATTCCATT
TCATATGTATGTGAACGATCCCGCACGTAATAAACGCTAAGTACTAGGAG
GGGGGGGGGGGCACCGCACCAAGCACGGATGGTGTACTGACGCACTGATG
CGACGTGAGTGGGGTTGCCCGAGTTTTTGTTGTGTTGCACCCAGGCGCCC
AGGATGCCAATGTGTTGCGCCCGGCATTGAAAGCAGGAGTACAACAACGC
TGCCGCTGCTGCTGTCAGTCGAACAACGTCGTGTCTGTCGCAGTCGGACG
AGGTTGCGCGACTGCATGTGTCTCATGTGGTCTTGTAAGAAATTCAAATG
TTGTCTGTTGCGGCTTTGTTGATATGTCGTTAGCCTAGCGGAAGGCGTTG
GATAGAAAGAAACTGCCACCGTTTTTTGTGAATCGTCTCCTAGCCTTTAA
AGTATACCACACGGCCAACGACGCCGTTCAAGTGACTTCTCGGTGTTATT
TCCGCGGTACGTTTTCCCGGGAGAACACGGTGATCTTGCTGCGGTAAACA
CCGTCTTGGTGGTCCATTACCGTGTAAAAAAAAAAAATCATGTGTTAAGA
AAAAAAAATCGTGTGTTCGACTTCCTGCTGTATGACCCCGTTTGGAGCGT
CTACCTACCCGAAAGGTGTAAAGTGGCGTCCAATTAAAGGGATGACAACA
CACACACACTACGCGCCGTGGTTGCTTAGCACTGCAAAGATGTTATGGAA
TCGTTTCCGAGTAGGAAACCGAACCTTCTCGATCATAAGATAAAGTGTAC
CTACCTGGCATATACTCGGAGTATCACGTATCGAACCTTTCCAAGCTCTG
AGCTGGGTCTACCCTGTGTCCGAGGTTTAATAACAGAGGCTCAGCCAAAG
TCCCTACGAAGATAAAGATTTACATGGGTTTTGTACAAAACTGGCACTGT
TGAAGCACTCTTGAAAGCAAAAATTAGCCTGCTCGTGGATTTAAGAAAAA
AAATGAAATTGTGACATTGGCCTCGGGTCCTTTGAGACACCATCTGTGTT
CCCAATAAAACTCACGACACGTTTTTC
back to top

Coding sequence (CDS) from alignment at P-littoralis_Contig13:440082..448508-

>mRNA_P-littoralis_Contig13.96.3 ID=mRNA_P-littoralis_Contig13.96.3|Name=mRNA_P-littoralis_Contig13.96.3|organism=Pylaiella littoralis U1_48|type=CDS|length=1290bp|location=Sequence derived from alignment at P-littoralis_Contig13:440082..448508- (Pylaiella littoralis U1_48)
ATGGCTCGTACGGTGTTGATGGTGCTGGGATCGCTGCTGCTGGTGGCGCA
TCACGCCTCCGCGGCCGTGCACCGCGTGAAGCTGGCGAAGCGCTCGAACG
AGGAGTTCGTACAGGCCAAGCTCGCTCAGGAAGCCCAAGAATTCCGAAAC
GGATTCCAAGACCACTTCCGCGAAGGCCCGCCTGAGCCCAGGCACGATGA
GGGGGTCCTCGACACGGCGTTCCTCCGCGGGACCTCAAAACTCGATGAAG
TTCTCGGGGGCGAGCGTGCACCCCACTCACACCATCACACGATGCAGCAC
AACCTGGACAAGAAGGGAGCTGGCAAGATCATCGTCAAGGACTACCAGAA
CGCTCAGTACTACGGACAGGTGGAGATCGGCACGCCGCCCCAGTCGTTCA
ACGTAATCTTCGACACGGGAAGCGCCAACCTGTGGGTGGCGGGGAGCGAC
TGCGGAATGTCGTGCGGCATTCACCACCGCTTCAAGGCAGACAAGAGCTC
CACCCACACTGACGACGGGCGAGATTTCGAGATAACGTACGCCAGCGGCC
CCGTGAGCGGCGAGCTCTCGGTCGACACCGTTACGTGGGCAGGCATGAAG
CTCGAGGGACAGACCTTCGCCGAGGTCAGTGACGCCAAGGGTCTCGGTCT
CGCCTACATCATCGGCAAGTTCGACGGCATCATGGGCCTCGCGTTCGATG
AGATCAGTGTTGAGGGAGTTCCTACGCCTTTCGGAAGGATGGTGGAGTCC
GGGGAGCTGGACAGCCCGGTGTTCGCGTTTTACCTGGGCGACGAGAAGGA
GGGGGAGTTGATCATCGGCGGTACCGACCCGGACCACTTCCTCCATGACA
TCACCTACGTGCCCGTGTCGAAGAAGGGCTACTGGCAGATCGAGATGGAC
AGCGTCGACGTGGCCGGAGATTCGGTGACCTCCGTGACGTCGGCCATCCT
CGACTCGGGCACGTCCCTCCTCGTCGGACCCTCGGAAGACGTCAAGGAGA
TCGCTAGCAAAGTGGGTGCGGTCCAATTCATTAACGGAGAGTACCTCATG
CCCTGCAGCAGCGAGCTCCCTGCGCTAACCTTCACCATCGGCGGAAAGGA
GTACACACTTTCAGGCGACGAATACGTCATGAACGCCGGAAACAGCGAGG
TCTGCGTCCTGGCCATCATGGGAATGGACGTCCCCGAGCCCGCCGGCCCT
CTTTGGATCCTCGGCGACGTCTTCATGCGCAAGTACTACACGGTGTTCGA
CTACGGCAACGCGCGGATTGGGTTCGCCCGCTCCACGTAG
back to top