mRNA_P-littoralis_Contig13.75.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig13.75.1 vs. uniprot
Match: A0A6H5KKK4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKK4_9PHAE) HSP 1 Score: 111 bits (278), Expect = 1.870e-27 Identity = 66/142 (46.48%), Postives = 90/142 (63.38%), Query Frame = 1
Query: 1 VMAKLLSEMPTFSGGMPSQDEPEKMEKFQKRFNAWYYRFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFIQKLRSSLREHAQEAVLLERAAQAAKDGGTVEIEMDVIATAEELLAVQGKIFALLYNMDQTPIQAEMPPDTTVE 426
VM KLL P GGMP+ +PE+ + +FN+WY RF KR+ FSIRR+TSVGQK P+G EG AWA + KLR +L + A E + R A D ++ V T+E+L +V+ ++F L NMDQT +Q EMP +TT+E
Sbjct: 97 VMDKLLEMKPDALGGMPANAKPEEALALKVKFNSWYQRFRKRNGFSIRRRTSVGQKLPKGHEGMAWATVMKLRETLSKRAGE--IYARRHPPAPDESPIK---GVDLTSEQLASVEAEVFEELGNMDQTQVQHEMPVETTLE 233
BLAST of mRNA_P-littoralis_Contig13.75.1 vs. uniprot
Match: A0A6H5KJN9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJN9_9PHAE) HSP 1 Score: 114 bits (286), Expect = 3.260e-27 Identity = 69/142 (48.59%), Postives = 93/142 (65.49%), Query Frame = 1
Query: 1 VMAKLLSEMPTFSGGMPSQDEPEKMEKFQKRFNAWYYRFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFIQKLRSSLREHAQEAVLLERAAQAAKDGGTVEIEMDVIATAEELLAVQGKIFALLYNMDQTPIQAEMPPDTTVE 426
VM KLL P GGMP+ +PE+ F+ FN WY RF KR+ FSIRR+TSVGQK P+G+EG AWA + KLR +L + A E + R A D ++ E D+ T+E+L +V+ ++F L NMDQTP+Q EMP +TT+E
Sbjct: 123 VMNKLLELKPDALGGMPANAKPEEALAFKVNFNPWYQRFRKRNGFSIRRRTSVGQKLPKGYEGMAWATVMKLREALVKRAGE--IYARRHPPAPDESPIKGE-DL--TSEQLASVKAEVFEELGNMDQTPVQHEMPVETTLE 259
BLAST of mRNA_P-littoralis_Contig13.75.1 vs. uniprot
Match: A0A6H5JCV1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCV1_9PHAE) HSP 1 Score: 113 bits (283), Expect = 1.090e-26 Identity = 65/142 (45.77%), Postives = 92/142 (64.79%), Query Frame = 1
Query: 1 VMAKLLSEMPTFSGGMPSQDEPEKMEKFQKRFNAWYYRFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFIQKLRSSLREHAQEAVLLERAAQAAKDGGTVEIEMDVIATAEELLAVQGKIFALLYNMDQTPIQAEMPPDTTVE 426
VM K+L P GGMP+ +PE+ F+ +FN+WY RF KRH SIRR+TSVGQK P+G+EG AWA + KLR +L + A E + R A + T ++ T+E+L +V+ ++F L NMDQTP+Q EMP +TT++
Sbjct: 222 VMNKVLELKPDALGGMPANAKPEEALAFKVKFNSWYQRFRKRHGSSIRRRTSVGQKLPKGYEGMAWATVMKLREALVKRAGE-IYARRHPPAPDESPTKGEDL----TSEQLASVEAEVFEELGNMDQTPVQHEMPVETTLD 358
BLAST of mRNA_P-littoralis_Contig13.75.1 vs. uniprot
Match: A0A6H5JAU0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAU0_9PHAE) HSP 1 Score: 113 bits (282), Expect = 1.370e-26 Identity = 65/142 (45.77%), Postives = 92/142 (64.79%), Query Frame = 1
Query: 1 VMAKLLSEMPTFSGGMPSQDEPEKMEKFQKRFNAWYYRFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFIQKLRSSLREHAQEAVLLERAAQAAKDGGTVEIEMDVIATAEELLAVQGKIFALLYNMDQTPIQAEMPPDTTVE 426
VM KLL P GGMP+ +PE+ F+ +FN+WY RF KRH SIR++TSVGQK P+G+EG AWA + KLR +L + A E + R A + T ++ T+E+L +V+ ++F L NMDQTP+Q EMP +TT++
Sbjct: 168 VMNKLLELKPDALGGMPANAKPEEALAFKVKFNSWYQRFRKRHGSSIRQRTSVGQKLPKGYEGMAWATVMKLREALVKRAGE-IYARRHPPAPDESPTKGEDL----TSEQLASVEAEVFEELGNMDQTPVQHEMPVETTLD 304
BLAST of mRNA_P-littoralis_Contig13.75.1 vs. uniprot
Match: A0A6H5KRZ8_9PHAE (DDE-1 domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRZ8_9PHAE) HSP 1 Score: 113 bits (283), Expect = 1.690e-26 Identity = 68/142 (47.89%), Postives = 94/142 (66.20%), Query Frame = 1
Query: 1 VMAKLLSEMPTFSGGMPSQDEPEKMEKFQKRFNAWYYRFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFIQKLRSSLREHAQEAVLLERAAQAAKDGGTVEIEMDVIATAEELLAVQGKIFALLYNMDQTPIQAEMPPDTTVE 426
VM KLL P GGM + +PE+ F+ +FN+WY RF KR+ FSIRR+TSVGQK P+G+EG AWA + KLR +L + A E + R A D ++ E D+ T+E+L +V+ ++F L NMDQTP+Q EMP +TT+E
Sbjct: 182 VMNKLLELKPDALGGMSTNAKPEEALAFKVKFNSWYQRFRKRNGFSIRRRTSVGQKLPKGYEGMAWATVMKLREALVKRAGE--IYARRHPPAPDESPIKGE-DL--TSEQLASVEAEVFEELGNMDQTPVQHEMPVETTLE 318
BLAST of mRNA_P-littoralis_Contig13.75.1 vs. uniprot
Match: A0A6H5L6D5_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6D5_9PHAE) HSP 1 Score: 106 bits (264), Expect = 1.690e-26 Identity = 66/141 (46.81%), Postives = 91/141 (64.54%), Query Frame = 1
Query: 4 MAKLLSEMPTFSGGMPSQDEPEKMEKFQKRFNAWYYRFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFIQKLRSSLREHAQEAVLLERAAQAAKDGGTVEIEMDVIATAEELLAVQGKIFALLYNMDQTPIQAEMPPDTTVE 426
M KLL P GGMP+ +PE+ F+ +FN+WY F KR+ FSIRR+TSVGQK P+G+EG A A + KLR +L + A E + R A D ++ E D+ T+E+L +V+ K+F L NMDQTP+Q EMP + T+E
Sbjct: 1 MNKLLQLKPDTLGGMPANAKPEEALAFKVKFNSWYQWFRKRNGFSIRRRTSVGQKLPKGYEGVAGATVMKLREALVKRAGE--IYARRHPPAPDESPIKGE-DL--TSEQLASVEAKVFEELGNMDQTPVQHEMPVENTLE 136
BLAST of mRNA_P-littoralis_Contig13.75.1 vs. uniprot
Match: A0A6H5KMV6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMV6_9PHAE) HSP 1 Score: 105 bits (262), Expect = 2.370e-26 Identity = 65/141 (46.10%), Postives = 88/141 (62.41%), Query Frame = 1
Query: 4 MAKLLSEMPTFSGGMPSQDEPEKMEKFQKRFNAWYYRFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFIQKLRSSLREHAQEAVLLERAAQAAKDGGTVEIEMDVIATAEELLAVQGKIFALLYNMDQTPIQAEMPPDTTVE 426
M KLL P GGMP+ +PE F+ FN+WY RF R+ FSIRR+TSV +K P+G+EG AWA + KLR +L E A E + R A D ++ E D+ T+E+L +V+ +F L NMDQ P+Q EMP +TT+E
Sbjct: 1 MNKLLELKPDVLGGMPANAKPEDALAFKIEFNSWYQRFRMRNGFSIRRRTSVDKKLPKGYEGMAWATVMKLREALVERAGE--IYARRHPPAPDESPIKGE-DL--TSEQLASVEADVFEELGNMDQLPVQDEMPVETTLE 136
BLAST of mRNA_P-littoralis_Contig13.75.1 vs. uniprot
Match: A0A6H5KRF0_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRF0_9PHAE) HSP 1 Score: 112 bits (281), Expect = 3.280e-26 Identity = 67/142 (47.18%), Postives = 94/142 (66.20%), Query Frame = 1
Query: 1 VMAKLLSEMPTFSGGMPSQDEPEKMEKFQKRFNAWYYRFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFIQKLRSSLREHAQEAVLLERAAQAAKDGGTVEIEMDVIATAEELLAVQGKIFALLYNMDQTPIQAEMPPDTTVE 426
VM KLL P GGMP+ +PE+ F+ +FN+WY RF KR+ FSIRR+TSV QK P+G+EG AWA + KLR +L + A E + R A + ++ E D+ T+E+L +V+ ++F L NMDQTP+Q EMP +TT+E
Sbjct: 211 VMNKLLELKPDALGGMPANAKPEEALAFKVKFNSWYQRFRKRNGFSIRRRTSVAQKLPKGYEGMAWATVMKLREALVKRAGE--IYARRHPPAPEESPIKGE-DL--TSEQLASVEAEVFEELGNMDQTPVQHEMPVETTLE 347
BLAST of mRNA_P-littoralis_Contig13.75.1 vs. uniprot
Match: A0A6H5K6L9_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6L9_9PHAE) HSP 1 Score: 111 bits (277), Expect = 5.240e-26 Identity = 67/141 (47.52%), Postives = 93/141 (65.96%), Query Frame = 1
Query: 4 MAKLLSEMPTFSGGMPSQDEPEKMEKFQKRFNAWYYRFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFIQKLRSSLREHAQEAVLLERAAQAAKDGGTVEIEMDVIATAEELLAVQGKIFALLYNMDQTPIQAEMPPDTTVE 426
M KLL P GGMP+ +PE+ F+ +FN+WY RF KR+ FSIRR+TSVGQK P+G EG AWA + KLR +L + A E + R A D ++ E D+ T+E+L +V+ ++F L NMDQTP+Q E+P +TT+E
Sbjct: 1 MNKLLELKPDALGGMPANAKPEEALAFKVKFNSWYQRFRKRNGFSIRRRTSVGQKLPKGDEGMAWATVMKLREALVKRAGE--IYARRHPPAPDESPIKGE-DL--TSEQLASVEAEVFEELGNMDQTPVQHEIPVETTLE 136
BLAST of mRNA_P-littoralis_Contig13.75.1 vs. uniprot
Match: A0A6H5KFQ9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFQ9_9PHAE) HSP 1 Score: 109 bits (272), Expect = 6.000e-26 Identity = 65/142 (45.77%), Postives = 92/142 (64.79%), Query Frame = 1
Query: 1 VMAKLLSEMPTFSGGMPSQDEPEKMEKFQKRFNAWYYRFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFIQKLRSSLREHAQEAVLLERAAQAAKDGGTVEIEMDVIATAEELLAVQGKIFALLYNMDQTPIQAEMPPDTTVE 426
V+ KLL P GGMP+ +PE+ F+ +FN+WY +F KR+ FSIRR+TSVGQK P+G+EG AWA + LR +L + A + R A D ++ E D+ T E+L +V+ ++F L NMDQTP+Q EMP +TT+E
Sbjct: 186 VINKLLQLKPDALGGMPANAKPEEALAFKIKFNSWYQQFRKRNGFSIRRRTSVGQKLPKGYEGTAWATVMNLREALVQRA--GAIHARRNPPAPDESPIKGE-DL--TCEQLASVEAEVFEELGNMDQTPVQHEMPVETTLE 322 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig13.75.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig13.75.1 >prot_P-littoralis_Contig13.75.1 ID=prot_P-littoralis_Contig13.75.1|Name=mRNA_P-littoralis_Contig13.75.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=141bp MAKLLSEMPTFSGGMPSQDEPEKMEKFQKRFNAWYYRFLKRHRFSIRRKTback to top mRNA from alignment at P-littoralis_Contig13:381928..382353+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig13.75.1 ID=mRNA_P-littoralis_Contig13.75.1|Name=mRNA_P-littoralis_Contig13.75.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=426bp|location=Sequence derived from alignment at P-littoralis_Contig13:381928..382353+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig13:381928..382353+ >mRNA_P-littoralis_Contig13.75.1 ID=mRNA_P-littoralis_Contig13.75.1|Name=mRNA_P-littoralis_Contig13.75.1|organism=Pylaiella littoralis U1_48|type=CDS|length=423bp|location=Sequence derived from alignment at P-littoralis_Contig13:381928..382353+ (Pylaiella littoralis U1_48)back to top |