prot_P-littoralis_Contig13.36.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig13.36.1
Unique Nameprot_P-littoralis_Contig13.36.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length151
Homology
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BLAST of mRNA_P-littoralis_Contig13.36.1 vs. uniprot
Match: D7FLY0_ECTSI (EF-hand domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLY0_ECTSI)

HSP 1 Score: 218 bits (556), Expect = 9.200e-71
Identity = 111/151 (73.51%), Postives = 127/151 (84.11%), Query Frame = 0 
Query:    1 MPKPGSKFNGRLKNAARAVTSALNKESREA-ADGDRSVKVPTEAEMHSLTSAMDSDRTGKIEFGCFFSAMAAFLKPQYGREMLDEAFDEISGGQDEIDSNSLQRTMIHLGQSTIRFADCETMICEVDRQGRGRISREDFFHHLQTCATDNI 150
            M   G++ N RLKNAARAV+SALNK+SREA ADGD   KVPT+AE+ SLTS MDSD+TGK++FG FF+AMAAF+KP+YGRE LD AFDEISGG DEID+  L RTM+HLGQSTIR+ADCE MICEVDR G GRIS+ DF HHLQTC TDNI
Sbjct:    1 MLNKGARINNRLKNAARAVSSALNKDSREAGADGDDDSKVPTKAELSSLTSKMDSDKTGKVDFGSFFAAMAAFMKPKYGREKLDRAFDEISGGLDEIDATFLHRTMVHLGQSTIRYADCEAMICEVDRNGHGRISKRDF-HHLQTCTTDNI 150
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BLAST of mRNA_P-littoralis_Contig13.36.1 vs. uniprot
Match: A0A835YZ87_9STRA (EF-hand domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZ87_9STRA)

HSP 1 Score: 82.0 bits (201), Expect = 2.420e-17
Identity = 44/114 (38.60%), Postives = 64/114 (56.14%), Query Frame = 0 
Query:   37 VKVPTEAEMHSLTSAMDSDRTGKIEFGCFFSAMAAFLKPQYGREMLDEAFDEISG------GQDEIDSNSLQRTMIH-LGQSTIRFADCETMICEVDRQGRGRISREDFFHHLQ 143
            +++PT  E+  + + MD D+TG I+F  FFS +A  LKP Y  +ML+ AF  I G        D + S    R  +H LGQ  +   DC+ ++ E+DR GRG +SR DF   +Q
Sbjct:    1 MQIPTAQELEDMKAGMDPDKTGHIDFPSFFSVLAISLKPVYSEKMLNSAFAHIVGVPESAISDDTVLSRGQLRACMHRLGQVRLSLDDCDDIVREMDRTGRGAVSRADFVQAMQ 114
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig13.36.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FLY0_ECTSI9.200e-7173.51EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
A0A835YZ87_9STRA2.420e-1738.60EF-hand domain-containing protein n=1 Tax=Tribonem... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002048EF-hand domainPFAMPF13833EF-hand_8coord: 93..139
e-value: 5.1E-4
score: 19.8
NoneNo IPR availableGENE3D1.10.238.10coord: 12..148
e-value: 2.1E-14
score: 55.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 27..41
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 19..43
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 40..143

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig13contigP-littoralis_Contig13:191894..194315 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig13.36.1mRNA_P-littoralis_Contig13.36.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig13 191737..194315 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig13.36.1 ID=prot_P-littoralis_Contig13.36.1|Name=mRNA_P-littoralis_Contig13.36.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=151bp
MPKPGSKFNGRLKNAARAVTSALNKESREAADGDRSVKVPTEAEMHSLTS
AMDSDRTGKIEFGCFFSAMAAFLKPQYGREMLDEAFDEISGGQDEIDSNS
LQRTMIHLGQSTIRFADCETMICEVDRQGRGRISREDFFHHLQTCATDNI
*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR011992EF-hand-dom_pair