mRNA_P-littoralis_Contig13.7.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig13.7.1 vs. uniprot
Match: D8LLG1_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLG1_ECTSI) HSP 1 Score: 368 bits (945), Expect = 1.130e-104 Identity = 332/847 (39.20%), Postives = 455/847 (53.72%), Query Frame = 1
Query: 16 DREALLAFFESTNGREWSISTCWGTDADIVFWRGVDVDCEGRVDVLVLNDNNLSGELPAALGNLHHLRFLNLQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFPKEVAASLLQLANVPTVATRGNPWEKPPLAVVEAGVEAMVRYFEDIERSGSLESWMLKVVLVGAVCAGKSSVVKSLIAGK-PQLVPLARRTRGVDVHVEHPFKPDASKPVELIFWDFAGHDDYHSTHSLFLSTEALFLLTVDLARFVDEPSSRGDSIYIWLDTLLCRTPGAVVQIVVTHTDDERIDDEE--GAMEELRGVVAEHL--------AAKRLQHE------------RGWKKRGREEGDMPAVPMLKIVDKIHAVSCVKGDDWPAIGEAMAHLAAEGTAECLSESSSNAGQTTGRKESKLFLSMGQEIPTIWARASAVMNALRDGTDPVHAATLPPQPHTWKGMVANAQVR----YVSWDEAVRKWEMAVNAS----EFSDEIGPE---GATAVLKDMIRLKVREGMFLFENELLHLDPTWINDLLRAILDHRLQDPSETHFWETQLEAFVDRYDLEYSQLSNTHQTFCAEGTLTVSYLKFLWREV-KGIQKEGVFDRLLETMMTHGVLFSGPSEARDGSIEMNAALF-VPVRL-QRYTSKEILETFSARCREWRCQLLFRVKQSYVPPGIIGMFMARLL-----VVDNVQLHCAWSRGLSFMMGGSEVMLYLNPPETCDGKAEIEINVVGPIRSDEVQRKVAKLKNEIEEVLQENFPGLFFDLKGGKPRYLESENALMDRIDTLGEHLDVRLDS-IEGALTKVAESSR-QSL 2424
D +AL+A + +T+G W + W TD D+ W GV+++ +GRV L L NNL G +P L L L L L XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX P A L + + +V +GNPWE PP V++ G + +V + E + +SG LKVVLVGAV AGK+++ + L+ GK Q +P RTRG+DVH++ P+ PD P+E++ WDFAGHDDYHSTH +FL+ AL LL VDL +F + SRG +YIWLD+LLCR PG+ V +V TH D D E GA+E L+ V EHL AAKRL+ R + + PA P L + I +VS D +GE + +A E +F S+ + +P IW R AVM+AL G DP A L +G V + R +V+ ++A W A S E + G + ++ K + L+ G L L+HL+P+WIN LLR +LDHRL DP+E +W QL+A+ + ++L TH+ F G LT +L+FLWR+V KG+ E VF RL+ETM H +F DG E N F VP RL T + A R R Q + + YVPP II F+ V N+ W+RG++F+ G E ++ + + IEIN+ GP +D V + ++K ++++L+E +PGL FD PR+ A D ++ L + L +LD +E L++ E+ + QSL
Sbjct: 5 DYDALVALYHATDGANWKQNRNWITDTDLSQWYGVELNDQGRVACLNLYSNNLRGLIPKELEALTMLEQLLLAYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDIPGATAERLKAMPEL-SVDLKGNPWETPPWNVIQGGWDQVVSFHEGLSQSGGQVVPSLKVVLVGAVGAGKTTLARGLLDGKIAQTLP--PRTRGIDVHIQ-PWVPDFDPPLEVLIWDFAGHDDYHSTHQMFLTDGALHLLVVDLHKFDRDVLSRGGGVYIWLDSLLCRVPGSAVLVVATHADAFGDDHERSAGALEALKAAVTEHLETKRQDWLAAKRLEERELMSQARPASTGRDFMSESPADRSKPAPPSLHLCGFI-SVSGRSLDGLSTVGEKIWEVA---------------------NEPAVFPSVRKIVPGIWRRVWAVMDALHVGADPDSAVRL-------EGPVVTIEGRDKHEFVTEEQAFEVWSHADRESATQLEAAGHFGEQLRLVSSRHFKAALNLRHMGGSVLAVCGLIHLNPSWINVLLREVLDHRLTDPNEDEWWWKQLKAYERNRGIPINELLETHRHFTTTGILTEEFLRFLWRDVLKGVD-EKVFARLVETMTAHDAMFP----CNDGVTEGNVREFMVPARLPDGVTGDSFAKLEDAMSRGTRMQFVIEIYAKYVPPAIIAKFLGGFGRDESGVFRNLMFRTCWARGVAFVADGRECLVRVGEV-SARPLPMIEINIAGPDVND-VFKVGFEIKKNVKDLLREAYPGLAFD-SSAHPRFENGTEAWQDSLEALQKDLFDKLDQRLESVLSEFLEAFKGQSL 810
BLAST of mRNA_P-littoralis_Contig13.7.1 vs. uniprot
Match: D7FUH6_ECTSI (LRR-GTPase of the ROCO family, incomplete sequence n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUH6_ECTSI) HSP 1 Score: 339 bits (870), Expect = 2.400e-94 Identity = 235/686 (34.26%), Postives = 361/686 (52.62%), Query Frame = 1
Query: 463 NPWEKPPLAVVEAGVEAMVRYFEDIERSGSLESW-MLKVVLVGAVCAGKSSVVKSLIAGKPQLVPLARRTRGVDVHVEHPFKPDASKPVELIFWDFAGHDDYHSTHSLFLSTEALFLLTVDLARFVDEPSSRGDSIYIWLDTLLCRTPGAVVQIVVTHTD---DERIDDEEGAMEELRGVVAEHLAAKRLQHERGWKKRGREEGDMPAVPMLKIVDKIHAVSCVKGDDWPAIGEAMAHLAAE------GTAECLSESSSNAGQTTGRK------ESKLFLSMGQEIPTIWARASAVMNALRDGTDPVHAATLPPQPHTWKGMVANAQVR----YVSWDEAVRKWEMAVNASEFSD--EIGPEG------ATAVLKDMIRLKVREGMFLFENELLHLDPTWINDLLRAILDHRLQDPSETHFWETQLEAFVDRYDLEYSQLSNTHQTFCAEGTLTVSYLKFLWREVKGIQKEGVFDRLLETMMTHGVLFSGPSEARDGSIEMNAALFVPVRLQRYTS-KEILETFSARCREWRCQLLFRVKQSYVPPGIIGMFMARLLVVD-----NVQLHCAWSRGLSFMMGGSEVMLYLNPPETC-DGKAEIEINVVGPIRSDEVQRKVAKLKNEIEEVLQENFPGLFFDLKGGKPRYLESENALMD-RIDTLGEHLDVRLDSIEGALTKVAESS 2412
N W+ PP V++ G ++ ++E + +SG + LKVVLVGAV AGK+++ + L+ GK VP RTRGVDVH+ +P+ P+ VE++ WDFAGHDDY+STH LFL++ +L +L VDL +FV +PSS GD++Y+WLD+LLCR PG+VV +V TH D D R + A+ +L + +HL KR + W+ R+ P D+ ++ +PA A + G+ L + S GRK E+ LF + Q +P W R AVM+ALR+G DP A L G +A + R +V+ + A W V+ ++ GP+ ++ + + ++L+ G L L+HL+ WIN+LLR +LDHRL DP + +W QL+ + +++++L H+ F G LT YL+FLWREVK +Q E VFDRL++TM H +F P E ++G +E VP RL + + E +A + R Q + ++ YVPPGII F+ L D + H +W RG++FM G E+++ L ETC + +E+N+ G D V +KN + +L++ +PGL FD + KP + + A D R G+ ++ ++E L K+ E S
Sbjct: 147 NRWKNPPWQVIQGGWYQVISFYEGLAQSGGVAVVPSLKVVLVGAVHAGKTTLTRGLLDGKLAKVP-PPRTRGVDVHI-NPWTPNFDPAVEVVIWDFAGHDDYYSTHQLFLTSGSLHVLVVDLHKFVCDPSSTGDTVYVWLDSLLCRVPGSVVLVVATHADAFGDNR-ERSAAALSKLEAAINDHLKEKREE----WQTAQRQAEKAKQTPQ----DRCGPLASGSTTGYPADHAAAPPPTLQLCGFILGSGRSLEDLS-----VLGRKIWEIANEASLFPDIHQTVPKSWRRVWAVMDALREGADPQKAVRL-------DGPLAPVEGREKREFVTREAAFEAW-WGVDGESVAELKAKGPDSQQLKQDSSRLFQAALKLRQMGGSVLAACGLVHLNVAWINELLRELLDHRLADPKQAKWWVEQLKTYCHDRGVKFNRLIGIHRRFVITGMLTKEYLRFLWREVKAVQDEEVFDRLVDTMALHDAMF--PCE-KNGVLE-EGEFMVPARLPASVACASLAELENAVSQGTRMQFVINIEAGYVPPGIIPQFLGELKRRDGGISGDFVFHVSWHRGVAFMTAGQEILVRLG--ETCAPSQRVVEVNIAGGAEKD-VYATGFGIKNLVVRLLEQRYPGLDFDPET-KPTFKKGREAWQDTRAALRGDLVEELEPNLEAVLRKILEPS 800
BLAST of mRNA_P-littoralis_Contig13.7.1 vs. uniprot
Match: A0A6H5L6I0_9PHAE (Roc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6I0_9PHAE) HSP 1 Score: 319 bits (817), Expect = 1.020e-89 Identity = 234/705 (33.19%), Postives = 346/705 (49.08%), Query Frame = 1
Query: 463 NPWEKPPLAVVEAGVEAMVRYFEDIERSGSLESW-MLKVVLVGAVCAGKSSVVKSLIAGKPQLVPLARRTRGVDVHVEHPFKPDASKPVELIFWDFAGHDDYHSTHSLFLSTEALFLLTVDLARFVDEPSSRGDSIYIWLDTLLCRTPGAVVQIVVTHTD--DERIDDEEGAMEELRGVVAEHLAAKRLQHERGWKKRGREEGDMPAVPMLKIVDKIHAVSCVKGDDWPAIGEAMAHLAAEGTAECLSESSSNAGQTT------GRK------ESKLFLSMGQEIPTIWARASAVMNALRDGTDPVHAATLPPQPHTWKGMVANAQVR----YVSWDEAVRKWEMAVNASEFSDEI-GPEG------ATAVLKDMIRLKVREGMFLFENELLHLDPTWINDLLRAILDHRLQDPSETHF-----------WETQLEAFVDRYDLEYSQLSNTHQT---------------FCAEGTLTVSYLKFLWREVKGIQKEGVFDRLLETMMTHGVLFSGPSEARDGSIEMNAALFVPVRLQRYTS-KEILETFSARCREWRCQLLFRVKQSYVPPGIIGMFMARLLVVD-----NVQLHCAWSRGLSFMMGGSEVMLYLNPPETC-DGKAEIEINVVGPIRSDEVQRKVAKLKNEIEEVLQENFPGLFFD------LKGGKPRYLESENALM-DRIDTLGEHLDVRLDSI 2379
N W KPP V++ G ++ ++E + +SG++ LKVV VGAV AGK+++ + L+ GK +P RTRGVDVHV +P+ P+ PVE++ WDFAGHDDY+STH LFL++ +L +L VDL +FV +PSS GD++Y+WLD+LLCR PG+VV +V T+ D + + A+ +L + EHL KR++ W+ R+ + P + C G H AA L S +G++ GRK E LF + Q+IP W R AVM+ALR+G DP A L G +A + R +V+ +EA W A S + GP+ + + + ++L+ G L L+HL+ WIN+LLR +LDHRL DP + F W QL + + +++L H+ F G +T YL+FLWREVK +Q + VFDRL++TM H +F P + I VP RL + E A + R Q + + YVPPGII F+ L D H +W RG++FM G ++++ L ETC + +E+N+ G D A +K I +L++ +PGL FD L GK + E+ AL D ++ L +L+ L I
Sbjct: 42 NRWNKPPWQVIQGGWYQVISFYEGLAQSGAVAVVPSLKVVFVGAVHAGKTTLTRGLLDGKLAKLP-PPRTRGVDVHV-NPWTPNFDPPVEVVIWDFAGHDDYYSTHQLFLTSGSLHVLVVDLHKFVCDPSSTGDTVYVWLDSLLCRVPGSVVLVVATYADAFGDNHERSAAALSKLEAAIHEHLEEKRME----WQTAQRQAENTKQTPQDR---------CGPPASGSTTGYPADHAAAPPPTLQLCGFISGSGRSLEDLSVLGRKIWEIAHEESLFPDIHQKIPKSWRRVWAVMDALREGADPQKAVRL-------DGPLAPVEGREKREFVTREEAFEAWWGADGESVAELKAKGPDSQHLNQDSQRLFQAALKLRQMGGSVLAACGLVHLNVAWINELLRELLDHRLADPKQASFVSLSHFAAANWWVEQLRTYCRERGVLFNRLIGIHRVQTVPCKNNQSCALRRFVITGVITKEYLRFLWREVKAVQDDEVFDRLVDTMALHDAMF--PCDKN--GIHQEGEFMVPARLPASVPCASLAELEKAISQGTRMQFVIAIYAGYVPPGIIPQFLGELKRRDCGISGEFVFHVSWHRGVAFMTAGQQILVRLG--ETCVPSQRVVEVNIAGDAEKDVYDTGFA-IKKLIVRLLEKRYPGLDFDPEANPTLMKGKEAWQETRAALRGDLVEELERNLEAVLRRI 717
BLAST of mRNA_P-littoralis_Contig13.7.1 vs. uniprot
Match: D8LF46_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF46_ECTSI) HSP 1 Score: 262 bits (669), Expect = 9.240e-68 Identity = 289/1032 (28.00%), Postives = 439/1032 (42.54%), Query Frame = 1
Query: 400 PKEVAASLLQLANVPT--VATRGNPWEKPPLAVVEAGVEAMVRYFEDIERSGS-LESWMLKVVLVGAVCAGKSSVVKSLIAGKPQLVPLARRTRGVDVHVEHPFKPDASKPVELIFWDFAGHDDYHSTHSLFLSTEALFLLTVDLARFVDEPSSRGDS--------------IYIWLDTLLCRTPGAVVQIVVTHTDDERIDDEEGAMEELRGVVAEHLAAKRLQHERGWKKRGREEGDMPAVPMLKIVDKIHAVSCVKGDDWPA-IGE-----AMAHLAAEGTA------ECLSESSSNAGQTTGRKESKLFLSMGQEIPTIWARASAVMNALRDGTDPVHAATLP-PQP----HTWKGMVANAQVRYVSWDEAVRKWEMAVNASEFSDEIGPEGATAV-----LKDMIRLKVREGMFLFENELLHLDPTWINDLLRAILDHRLQDPSETHFWETQLEAFVD-RYDLEYSQLSNTHQTFCAEGTLTVSYLKFLWREVKGIQKEGVFDRLLETMMTHGVLFSGPSEARDGSIEMNAALFVPVRLQRYTSK---EILETFSAR-----CREWRCQLLFRVKQSYVPPGIIGMFMARLLVVDNVQLHCAWS------------RG-------------------------------LSFMMGGSEVMLYLNP---------------------------------------PETCD-GKAEIEINVVGPIRSD------EVQRKVAKLKNEIEEVLQENFPGLFFDLKGGKPRYLESENALMDRIDTLGEHLDVRLDSIEGALTKVAESSRQSLMHLKTLQALNYPYPHLVVVREHEPTSNTQRRRRKKLVLSKALFRSFGTRVRTGVKKEMRLQFLCPFDFSEVPCGPGGQGYCFGETRDWVKKVFPTLQVTAVVAKVALKAVAGLDLEISDFLNAVKGGIGEEVADCVLDEEALRRVVLGDEVPSTDLQGASKASYEALQKLMAKEEKKRKDNARPGDGHVDFRKEMKRVGDGEGGMVWISNGNVQRWLDSH 3084
P ++ L L VP+ V GNPW +PP +VV G +++ YFED+ + +KVVLVG AGK+S+ +S+ A K V +VE P + D S + +D AG Y +FL+ ++ +L + F S + WL ++ R P V +V T D L G A + ++ R W G P +++ + SC +P +GE A H+ G A E S S + + + + +P W A AV+ AL G DPV P+P T G A+ + ++ +E KW+ V DE+ G T L+ + ++ +G + + + LD W++ +L+ +L+H+ Q T +L D R L ++ +EG L +W G+ + +L T+++ G+ F P E + +A L V +RL+ + + E+++TF ++ W L VPPG I + R + +VQ + RG LS++M +ML P PET G A I++ + IR D EV+ + L+++ +F G + +E+ L+ +I E + + + + G L V ES+++SLM LK LQA NY YP LVVV++ + R + R +++R KK+M L FLCP D +EVPCGPGG+GY F E RDWVKK+ P LQVT V AKVAL AV GL++++S FL V+ G+ E+ D LDE+AL R V GD TDLQ ++ASYEAL+ M EE++R+ NAR GDG++DFR +MK + DG GG VWI N NVQ+WLDS+
Sbjct: 349 PSQLCRLLDVLDPVPSRYVGLGGNPWTEPPESVVAKGPKSIRGYFEDLYAEPCRITRSSVKVVLVGQEGAGKTSLRQSMKANKASPTGKWNEESTVFANVE-PMELDGSS---VRVYDCAGQVAYTGLLQMFLTPRSVCVLVCNAGEFGQRRGSEDCGEVEQEDCRKLEELRVCDWLRSISRRVPDNDVILVATKCD-------------LVGGNAGEIGSRMENSCRTWLSGWVRNGMQP----VRLEPHVCLTSC-----FPIRVGEHGERSAGNHVWKGGWACDWRNVEDDQPSPSFLHRLVNKPDGRGLRGAQMVLPRSWDVALAVLEALEHGRDPVEVVLRKSPEPDRGDETETGGKADVY-QGITVEELGTKWQETV------DELERRGITVTNMMNALEGALSIREFDGSLVRHEKFVFLDVVWLSRILKPLLNHKDQ---RTFDGRVKLGDTGDTRITLHDQSDIDSWDRLKSEGVLEPRLANAMW-------PHGLSEYVLPTLVSVGLTF--PLEG-----DPDAGLVVLLRLEPHRPESVGEVIDTFCSKHTPAFSASWEIFL-------GVPPGAIEKVLTRCCGLGDVQTFWRYGVLVHGGLGDLDGRGIFAVVVEYSSTDNELTAQIFGDISTPAPWVALSYVMSAVSLMLVDFPGLRWKGCLKCPQHGNEMPFANKVNRAGDKFLERKCPRCSPETRGLGAAAIDLVCLVDIRLDRDVIFREVKARFVVLESQ------------YFSCPTGSSK---TEDELLRKI----EDMAIAMKVMTGRLDTVLESTQESLMRLKNLQAPNYLYPRLVVVKKDGNGGRSSR--------ATGWKRCLPSKLRGMGKKDMTLHFLCPVDMTEVPCGPGGEGYRFREMRDWVKKISPVLQVTLVTAKVALNAVTGLNVDVSGFLKDVQDGLLGEIVDRTLDEDALLRAVSGDGAIDTDLQRDTRASYEALKAFMENEERRRRKNARDGDGYIDFRDKMKLLPDGRGGEVWIRNENVQKWLDSN 1296
BLAST of mRNA_P-littoralis_Contig13.7.1 vs. uniprot
Match: A0A6H5L1D3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1D3_9PHAE) HSP 1 Score: 229 bits (585), Expect = 5.400e-64 Identity = 129/238 (54.20%), Postives = 158/238 (66.39%), Query Frame = 1
Query: 2377 IEGALTKVAESSRQSLMHLKTLQALNYPYPHLVVVREHEPTSNTQRRRRKKLVLSKALFRSFGTRVRTGVKKEMRLQFLCPFDFSEVPCGPGGQGYCFGETRDWVKKVFPTLQVTAVVAKVALKAVAGLDLEISDFLNAVKGGIGEEVADCVLDEEALRRVVLGDEVPSTDLQGASKASYEALQKLMAKEEKKRKDNARPGDGHVDFRKEMKRVGDGEGGMVWISNGNVQRWLDSHQM 3090
I G L KV ES+++SLM ++ LQA NY YP LVVV+E + KK +LSK R G KK+M L FLCP D ++VPCG GG+GY F ETR WVKK+ P LQV V AKVAL A GLD++IS+FL VK G+ E+ D LDE AL R V GD+ +LQ ++ASYEAL+K M KE+ R NAR GDG++DFR EMKRV DG GGMVW+ N NVQ+WLDSH +
Sbjct: 64 ISGRLDKVLESTQESLMRIRHLQAPNYRYPRLVVVKEVGSDGTASKAHGKKSLLSK--LRRLG-------KKDMTLHFLCPVDMTKVPCGYGGEGYRFQETRGWVKKISPVLQVAVVTAKVALNATTGLDVDISNFLKDVKDGLVNELVDRTLDE-ALLRAVSGDDDIGAELQRDTRASYEALKKFMDKEQVDRVKNARDGDGYIDFRDEMKRVTDGRGGMVWVRNDNVQKWLDSHSI 291
BLAST of mRNA_P-littoralis_Contig13.7.1 vs. uniprot
Match: A0A6H5KSY4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSY4_9PHAE) HSP 1 Score: 237 bits (605), Expect = 5.630e-64 Identity = 127/236 (53.81%), Postives = 164/236 (69.49%), Query Frame = 1
Query: 2374 SIEGALTKVAESSRQSLMHLKTLQALNYPYPHLVVVREHEPTSNTQRRRRKKLVLSKALFRSFGTRVRTGVKKEMRLQFLCPFDFSEVPCGPGGQGYCFGETRDWVKKVFPTLQVTAVVAKVALKAVAGLDLEISDFLNAVKGGIGEEVADCVLDEEALRRVVLGDEVPSTDLQGASKASYEALQKLMAKEEKKRKDNARPGDGHVDFRKEMKRVGDGEGGMVWISNGNVQRWLDS 3081
+++G+L KV ESS++SLM LK LQALNY YP LV+V+E + + K L FR G KK+M L FLCP D ++VPCG GG+GY F ETRDWVKK+ P LQV V AKVAL A GL+++ISDFL VK G+ EE+ D LDE+AL R VLG++ D+Q ++ASYEAL+ M EE++R+ NAR GDG++DFR+EMKRV +G GGMVW+ N NVQ+WL+S
Sbjct: 286 TMQGSLDKVLESSQESLMRLKDLQALNYRYPRLVIVKEAGICGRSSKATGWKRFLPNK-FRGVG-------KKDMALHFLCPVDMTKVPCGYGGEGYRFQETRDWVKKISPVLQVAVVTAKVALNATTGLNVDISDFLKDVKDGLVEELVDRTLDEDALLRAVLGEDSIGADMQRDTRASYEALKVFMENEERRRRKNARDGDGYIDFREEMKRVTNGRGGMVWVRNDNVQKWLES 513
BLAST of mRNA_P-littoralis_Contig13.7.1 vs. uniprot
Match: D7FUD0_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUD0_ECTSI) HSP 1 Score: 245 bits (626), Expect = 1.380e-62 Identity = 273/991 (27.55%), Postives = 407/991 (41.07%), Query Frame = 1
Query: 463 NPWEKPPLAVVEAGVEAMVRYFEDIERSGS-LESWMLKVVLVGAVCAGKSSVVKSLIAGKPQLVPLARRTRGVDVHVEHPFKPDASKPVELIFWDFAGHDDYHSTHSLFLSTEALFLLTVDLARF------------VDEPSSRGDSIYI--WLDTLLCRTPGAVVQIVVTHTDDERIDDEEGAMEELRGVVAEHLAAKRLQ-HERGWKKRGREEGDMPAVPMLKIVDKIHAVSCVKGDDWPAIGEAMAHLAAEGTAECL-------SESSSNAGQTTGRKESKLFLSMGQEIPTIWARASAVMNALRDGTDPVHAAT-----LPPQPHTWKGMVANAQVRYVSWDEAVRKWEMAVNASEFSDEIGPEGATAVLKDMIRLKVREGMFLFENELLHLDPTWINDLLRAILDHR--------------------LQDPSETHFW-----ETQLEAFVDR-----------------------------------YDLEYSQ---LSNTHQTFCAEGT--LTVSYLKFLWREVKGIQKEGVFDRL-----LETMMTHGVLFSGPSEARDGSIEMNAALFVPVRLQRYTSKEILETFSARCRE---WRCQLLFRVKQSYVPPGIIGMFMARLLVVDNVQLHCAW-----------SRGLSFMMGGSEVMLYLNPPETCDGKAEIEINVVGPIRSDEVQRKVAKLKNEIEEVLQENFPGLFFDLKG-----GKPRYLESENALMDRIDTLGEHLDVRLDSIEGALTKVAESSRQSLMHLKTLQALNYPYPHLVVVREHEPTSNTQRRRRKKLVLSKALFRSFGTRVRTGVKKEMRLQFLCPFDFSEVPCGPGGQGYCFGETRDWVKKVFPTLQVTAVVAKVALKAVAGLDLEISDFLNAVKGGIGEEVADCVLDEEALRRVVLGDEVPSTDLQGASKASYEALQKLMAKEEKKRKDNARPGDGHVDFRKEMKRVGDGEGGMVWISNGNVQRWLDSH 3084
NPW +PP ++V G + + YFED+ ++ +K++LVG AGK+S+ KS+ A + + V VE +S V +D AG Y +FL+ A+ ++ + F V E + + + + WL ++ R P V +V T D + G E KR++ R W G P +++ + SC + + + A EG C + S S + + + IP W A V+ AL G DPV T ++ ++ KW+ A D I A L+ + ++ +G + + LD W+ +L+ +L+H+ L+DPS+ W E LE + R LE+ + + TFC + T L S+ FL I+K V R ++T GVL G +D S +F V + E+ W V SYV + M + + L C +R ++ GS +P G A I++ + IR D +V+ F DL+G E L+ +++ + L D ++G L+KV +S+++SLM L+TLQA NYPYP LV + E R R K VLSK R GT KEM L FLCP D ++VPCG G GY F ETR WVKK+ P LQV V AKVA+KA +GLD+++SDFL V G+ +E+ D +LDE+ LRRVV G+E TD+Q ++ASYEAL +LM K E+++ +AR GDG+VDFR+ M+R+ DG GG VW+ N NVQ+WLDSH
Sbjct: 301 NPWAEPPESIVAKGAKNIRGYFEDLYAEPCRVQRSSVKIILVGQEGAGKTSLRKSMKAKEATPTGEWKEESTVFADVERMELEGSSIRV----YDCAGQVAYTGLLQMFLTPRAVCVIVCNAESFGQQRGTCETGGQVKEDCRKLEELRVCDWLRSISRRVPDNDVILVATKCDS------------VGGNAGE--IGKRIELASRMWLASWVRSGMQP----VRLEPGVCLTSCCTTNVCEDGERSTRNQAMEGGWTCDWRDGKDDNPSPSLLHRLVNKPDGGGLRGAQMVIPRSWDIALTVLEALERGRDPVEMVVEDLGDADGGDATGTAACKTGLYHGITAEDLRTKWQEAAVGLAGRD-ITVTNADNALEGALAIREFDGSLVRHETFVFLDVVWLARILKPLLNHKDEETFDGLVNLGDTGDTRVTLEDPSDIASWGRLKNEGVLEPRLARKLWPNGLSEYVIPTIASLGLTFPLENDPAGGLVVLLRLEHDRPELVGKVIDTFCLDQTPALRASWKIFLGVPAGAIEK--VLTRCCSLGGVQTFWRSGVLVHGGVGEQDRS-----GIFAVVLEYSPSDNELTAQIFGDISTPAPW-------VALSYVVSAVSLMLLDFPGLRSRGSLKCPQHGDAMPLANMVTRTGDKILEGSRCR-QCSPDTRGLGAAAIDLVRMVDIRLD-------------RDVIFREVKARFVDLEGQYSFSSSTASSNDEGVLVQKMEEVARTLKDGFDDLKGRLSKVLDSTQESLMRLQTLQAPNYPYPRLVAIEEIASGGTLTRARGMKRVLSK--LRGVGT-------KEMTLHFLCPVDMTKVPCGYDGDGYRFRETRRWVKKLSPVLQVAMVTAKVAIKATSGLDVDLSDFLKDVNDGLVDELVDRMLDEDELRRVVSGEEDVGTDMQKQTRASYEALTELMGKLERRK--DARDGDGYVDFRENMQRLSDGRGGEVWVRNENVQKWLDSH 1229
BLAST of mRNA_P-littoralis_Contig13.7.1 vs. uniprot
Match: A0A6H5L846_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L846_9PHAE) HSP 1 Score: 241 bits (615), Expect = 3.460e-62 Identity = 197/572 (34.44%), Postives = 283/572 (49.48%), Query Frame = 1
Query: 1411 WDEAVR---KWEMAVNASEFSDEIGPEGATAVLKDMIRLKVREGMFLFENELLHLDPTWINDLLRAILDHRLQDP--SETHFWETQLEAFVDRYDLEYSQLSNTHQTFCAEGTLTVSYLKFLWREVKGIQKEGVFDRLLETMMTHGVLFSGPSEARDGSIEM-NAALFVPVRLQRYTSKEILETFSAR-----CREWRCQLLFRVKQSYVPPGIIGMFMARLLVVDNVQLHCAWSRGL----SFMMGGSEVMLYLNPPETCDGKAEIEINVVGPIRSDEVQRKVAKLKNEIEEVLQENFPGLFFDLKGGKPRYLESENALMDRIDTLGEHLDVRLDSIEGALTKVAESSRQSLMHLKTLQALNYPYPHLVVVREHEPTSNTQRRRRKKLVLSKALFRSFGTRVRTGVKKEMRLQFLCPFDFSEVPCGPGGQGYCFGETRDWVKKVFPTLQVTAVVAKVALKAVAGLDLEISDFLNAVKGGIGEEVADCVLDEEALRRVVLGDEVPSTDLQGASKASYEALQKLMAKEEKKRKDNARPGDGHVDFRKEMKRVGDGEGGMVWISNGNVQRWLDS 3081
W+E VR K ++AV + E EGA ++ ++ VR MF+F LD W+ +L+ +L+H+ ++ +T R L+ + EG L + +W G+ + +L T+++ G+ FS + G + + P R+ + +++TF ++ W+ L VPPG I + R + V+ W G+ SF GG ++ E E+ V G + ++ + + + +L E FPGL G R + A M T G + + L + L ++ ++SLM LK LQ NYPYPHLVVV+E E N R T+ R K+M L FL P D S+VPCG G+GY F ETR WVKK+ P LQV V AKVALKA AGLD++IS+FL AVK G EEVADC LDEEAL RVV G+EV DLQ ++ SYEAL+K M KE +RK NA+ GDG++DFR++M+R DG+GG+VW+ NVQ+W DS
Sbjct: 408 WNETVRELAKRDIAVT----NPENALEGALSI-REFDGSLVRHEMFVF------LDVVWLARVLKPLLNHKDEESYNGSVKLGDTGDTCITLRDPLDIASWGRLK----GEGILEPRLAQAMW-------PAGLSEYVLPTLLSLGLGFSLGNNPAGGLVALLRLRSGRPARVGK-----VMDTFRSKNTAVFAASWKFFL-------GVPPGAIEKVLTRCCSIGGVRAF--WRFGVLVHGSFGDGGGSSGIFAVVLEYSSSGNELTAQVYGDASNPAPWVALSYVISAVRVMLLE-FPGLH---SKGSLRCPQHGGA-MPLTTTPGSNGEDVLAQMIRILGRIEGGIQESLMCLKNLQGPNYPYPHLVVVKEIETQGN----------------RGLLTKARGIAMKDMTLHFLFPVDMSKVPCGVDGEGYRFRETRGWVKKLSPVLQVAVVTAKVALKATAGLDVDISEFLQAVKEGAVEEVADCTLDEEALSRVVSGEEVAGADLQRDTRVSYEALKKFMDKELNRRK-NAKEGDGYIDFREKMQRESDGKGGIVWVRIENVQKWRDS 921
BLAST of mRNA_P-littoralis_Contig13.7.1 vs. uniprot
Match: D8LJS7_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJS7_ECTSI) HSP 1 Score: 241 bits (616), Expect = 2.980e-61 Identity = 134/243 (55.14%), Postives = 163/243 (67.08%), Query Frame = 1
Query: 2365 RLDSIEGALTKVAESSRQSLMHLKTLQALNYPYPHLVVVREHEPTSNTQRRRRKKLVLSKALFRSFGTRVRTGV-KKEMRLQFLCPFDFSEVPCGPGGQGYCFGETRDWVKKVFPTLQVTAVVAKVALKAVAGLDLEISDFLNAVKGGIGEEVADCVLDEEALRRVVLGDEVPSTDLQGASKASYEALQKLMAKEEKKRKDNARPGDGHVDFRKEMKRVGDGEGGMVWISNGNVQRWLDSHQM 3090
RL I G L KV ES+++SLM L+ LQA NY YP LVVV+E + R +K +LSK GV KK+M LQFLCP D ++VPCG GG+GY F ETR WVKK+ P LQV V AKVAL A GL ++ISDFL VK G+ EE+ D LD+EAL R VLGD+ DLQ ++ASYEAL+K M KE+ +R N R GDG++DFR EMKRV DG GGMVW+ N NVQ+WLDS +
Sbjct: 1075 RLGMISGRLDKVLESTQESLMRLRDLQAPNYRYPRLVVVKEVGSDGTASKARGRKSMLSKLC----------GVGKKDMTLQFLCPVDMTQVPCGYGGEGYRFKETRSWVKKISPVLQVAVVTAKVALNATTGLHVDISDFLKDVKDGLVEELVDRTLDDEALLRAVLGDDNIGADLQRDTRASYEALKKFMDKEQIERVKNTRDGDGYIDFRDEMKRVPDGRGGMVWVRNENVQKWLDSRSI 1307
BLAST of mRNA_P-littoralis_Contig13.7.1 vs. uniprot
Match: A0A6H5K516_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K516_9PHAE) HSP 1 Score: 233 bits (594), Expect = 3.100e-60 Identity = 134/268 (50.00%), Postives = 170/268 (63.43%), Query Frame = 1
Query: 2308 ESENALMDRIDTLGEHL-DVRLDSIEG------ALTKVAESSRQSLMHLKTLQALNYPYPHLVVVREHEPTSNTQRRRRKKLVLSKALFRSFGTRVRTGVKKEMRLQFLCPFDFSEVPCGPGGQGYCFGETRDWVKKVFPTLQVTAVVAKVALKAVAGLDLEISDFLNAVKGGIGEEVADCVLDEEALRRVVLGDEVPSTDLQGASKASYEALQKLMAKEEKKRKDNARPGDGHVDFRKEMKRVGDGEGGMVWISNGNVQRWLDSHQM 3090
+ E L+ +ID + + V+ + +G L KV ES+++SLM ++ LQA NY YP LVVV+E + KK VLSK R G KK+M L FLCP D ++VPCG GG+GY F ETR WVKK+ P LQV V A+VAL A GLD+ IS+FL VK G+ E+ D LDEEAL R V GD+ +LQ ++ASYEAL+K M KE+ R NAR GDG++DFR EMKRV DG GGMVW+ N NVQ+WLDSH +
Sbjct: 534 QEEGELIRKIDDVARAVRSVKKEMKDGFIMISERLDKVLESTQESLMRIRNLQAPNYRYPRLVVVKEVGSDGTASKAHGKKSVLSK--LRRLG-------KKDMTLHFLCPVDMTKVPCGYGGEGYRFQETRGWVKKISPVLQVAVVTARVALNATTGLDVNISNFLQDVKDGLVNELVDRTLDEEALLRAVSGDDDIGAELQRDTRASYEALKKFMDKEQVDRVKNARDGDGYIDFRDEMKRVTDGRGGMVWVRNDNVQKWLDSHSI 792 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig13.7.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig13.7.1 >prot_P-littoralis_Contig13.7.1 ID=prot_P-littoralis_Contig13.7.1|Name=mRNA_P-littoralis_Contig13.7.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=864bp MVRYFEDIERSGSLESWMLKVVLVGAVCAGKSSVVKSLIAGKPQLVPLARback to top mRNA from alignment at P-littoralis_Contig13:28435..45351- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig13.7.1 ID=mRNA_P-littoralis_Contig13.7.1|Name=mRNA_P-littoralis_Contig13.7.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=16917bp|location=Sequence derived from alignment at P-littoralis_Contig13:28435..45351- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig13:28435..45351- >mRNA_P-littoralis_Contig13.7.1 ID=mRNA_P-littoralis_Contig13.7.1|Name=mRNA_P-littoralis_Contig13.7.1|organism=Pylaiella littoralis U1_48|type=CDS|length=2592bp|location=Sequence derived from alignment at P-littoralis_Contig13:28435..45351- (Pylaiella littoralis U1_48)back to top |