prot_P-littoralis_Contig1298.8.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig1298.8.2
Unique Nameprot_P-littoralis_Contig1298.8.2
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length179
Homology
BLAST of mRNA_P-littoralis_Contig1298.8.2 vs. uniprot
Match: D8LD70_ECTSI (Condensin complex subunit 2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD70_ECTSI)

HSP 1 Score: 158 bits (399), Expect = 1.490e-41
Identity = 95/154 (61.69%), Postives = 108/154 (70.13%), Query Frame = 0
Query:   31 SLARKAKGVDVRRLKGDLWHKINTEFQSDIAAAAMKVDGGD-----------DLEVDNDPGMDQKAKKADDGDDGSAEVANGGEEEATGAKSSMPEVVDMTFSNIVHDVASREEQSGVTVPFYFICLLHLANEKGLRREGQEDLLDFSVASDPV 173
            + A+KAK VDVRRLKGDLW KINTEFQSD  AA + VDGG+           + EV+N    D ++K   DG D        GEEEA       PEVVDMTFSNIV DVAS+EEQ+GVTV FYFICLLHLANEKGL+ EG++DLLDFSVASDPV
Sbjct:  693 NYAKKAKRVDVRRLKGDLWRKINTEFQSD--AAVVDVDGGEGGGGAENPSEGEEEVEN---KDVESKSPADGGDK-------GEEEAEDVVKPAPEVVDMTFSNIVCDVASKEEQTGVTVSFYFICLLHLANEKGLKLEGRDDLLDFSVASDPV 834          
BLAST of mRNA_P-littoralis_Contig1298.8.2 vs. uniprot
Match: A0A6H5K552_9PHAE (Condensin complex subunit 2 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K552_9PHAE)

HSP 1 Score: 150 bits (379), Expect = 7.240e-41
Identity = 89/150 (59.33%), Postives = 103/150 (68.67%), Query Frame = 0
Query:   31 SLARKAKGVDVRRLKGDLWHKINTEFQSDIAAAAMKVDGG-------DDLEVDNDPGMDQKAKKADDGDDGSAEVANGGEEEATGAKSSMPEVVDMTFSNIVHDVASREEQSGVTVPFYFICLLHLANEKGLRREGQEDLLDFSVASDPV 173
            + A+KAK VDVRRLKGDLW KINT+ QSD A   +  D G        + EV+N    D ++K   DG D        G+EEA       P VVDMTFSNIV DVAS+EEQ+GVTVPFYFICLLHLANEKGL+ EG++DLLDFSVASDPV
Sbjct:  226 NYAKKAKRVDVRRLKGDLWQKINTKLQSDAAVVDVYRDEGGGGAENRSEEEVEN---KDVESKSPADGGDK-------GKEEAEDVVKPAPGVVDMTFSNIVCDVASKEEQTGVTVPFYFICLLHLANEKGLKLEGRDDLLDFSVASDPV 365          
BLAST of mRNA_P-littoralis_Contig1298.8.2 vs. uniprot
Match: A0A835Z1S3_9STRA (Condensin complex subunit 2 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1S3_9STRA)

HSP 1 Score: 86.3 bits (212), Expect = 2.170e-16
Identity = 54/138 (39.13%), Postives = 74/138 (53.62%), Query Frame = 0
Query:   33 ARKAKGVDVRRLKGDLWHKINTEFQSDIAAAAMKVDGGDDLEVDNDPGMDQKAKKADDGDDGSAEVANGGEEEATGAKSSMPEVVDMTFSNIVHDVASREEQSGVTVPFYFICLLHLANEKGLRREGQEDLLDFSVAS 170
            A +AK VDVRRLK +LW  I+      +      +           P   Q           SA          TG  ++ PE   + FS+++ +V+S+E+QSGVTV +YFICLLHLANEKGLR EGQ+DL+DF + +
Sbjct:  722 ATRAKKVDVRRLKHNLWQHIDAVVPPPLPHGVSPLRTA--------PATPQ-----------SAAXXXXXXXXXTGG-AAQPEPEPLLFSSVLDEVSSKEDQSGVTVSYYFICLLHLANEKGLRLEGQDDLMDFGIGA 839          
BLAST of mRNA_P-littoralis_Contig1298.8.2 vs. uniprot
Match: A0A7S1XKV0_9STRA (Condensin complex subunit 2 n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XKV0_9STRA)

HSP 1 Score: 80.1 bits (196), Expect = 2.650e-14
Identity = 54/140 (38.57%), Postives = 72/140 (51.43%), Query Frame = 0
Query:   31 SLARKAKGVDVRRLKGDLWHKINTEFQSDIAAAAMKVDGGDDLEVDNDPGMDQKAKKADDGDDGSAEVANGGEEEATGAKSSMPEVVDMTFSNIVHDVASREEQSGVTVPFYFICLLHLANEKGLRREG--QEDLLDFSV 168
            + A+ AK VDVRRLK +LW K+      D AA A   D       ++   M +   +A       A  A  G+               ++F ++V D+A  E Q+GVTVPFYFICLLHLANEKGL+ E   + DL DF +
Sbjct:  382 NYAKAAKRVDVRRLKKELWTKVEV----DAAAEAENADPESPAAAEDSLPMGKTRSEA-------AAAAEAGDPSGG-----------LSFQHVVRDMAKGEAQTGVTVPFYFICLLHLANEKGLKLENPNRADLTDFRI 499          
BLAST of mRNA_P-littoralis_Contig1298.8.2 vs. uniprot
Match: A0A2P4XE75_9STRA (Condensin complex subunit 2 n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XE75_9STRA)

HSP 1 Score: 80.1 bits (196), Expect = 3.070e-14
Identity = 53/143 (37.06%), Postives = 74/143 (51.75%), Query Frame = 0
Query:   34 RKAKGVDVRRLKGDLWHKINTEF--QSDIAAAAMKVDGGDDLEVDNDPGM---DQKAKKADDGDDGSAEVANGGEEEATGAKSSMPEVVDMTFSNIVHDVASREEQSGVTVPFYFICLLHLANEKGLRREGQEDLLDFSVASD 171
            R AK VDV++LKG +W  +  +     + A AA++ D  D     N+ G    +Q+  K D+ DD                     E ++ TF N+V +VA +   S VTV FYFIC+LHLANEKGL   GQ+DL DF +  +
Sbjct:  903 RFAKRVDVKKLKGSIWDHLEKKVVKNDNDAEAAVEADHADSAVAINESGKRPREQEVGKKDEDDD---------------------ETLETTFENVVENVAGKVP-SNVTVSFYFICVLHLANEKGLELVGQDDLRDFQIRKE 1023          
BLAST of mRNA_P-littoralis_Contig1298.8.2 vs. uniprot
Match: H3H3Y4_PHYRM (Condensin complex subunit 2 n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H3Y4_PHYRM)

HSP 1 Score: 78.6 bits (192), Expect = 1.050e-13
Identity = 59/150 (39.33%), Postives = 80/150 (53.33%), Query Frame = 0
Query:   34 RKAKGVDVRRLKGDLWHKINTE-FQSDIAAAA--MKVDGGDDLEVDNDPGMDQKAKKADDGDDGSAEVANGGEEEATGAKSSMPEV-------VDMTFSNIVHDVASREEQSGVTVPFYFICLLHLANEKGLRREGQEDLLDFSVASDPV 173
            R AK VDV++LKG +W  +  +  ++D  A A    V  G+  E DN       A+KA D D   A   N      +G +   PE+        + TF N+V +VA +   S VTV FYFIC+LHLANEKGL+  GQEDL +F +  D +
Sbjct:  917 RFAKRVDVKKLKGSIWDHLEKKVIRTDEKAGADGTAVANGNVQEADN-------AEKASDADQ--AVTFN-----ESGKRPREPEIDEKDEGEFETTFENVVENVAGKVP-SNVTVSFYFICMLHLANEKGLKLVGQEDLRNFQIRKDDL 1051          
BLAST of mRNA_P-littoralis_Contig1298.8.2 vs. uniprot
Match: A0A329ST35_9STRA (Condensin complex subunit 2 n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329ST35_9STRA)

HSP 1 Score: 76.6 bits (187), Expect = 4.850e-13
Identity = 51/138 (36.96%), Postives = 74/138 (53.62%), Query Frame = 0
Query:   34 RKAKGVDVRRLKGDLWHKINTEFQSDIAAAAMKVDGGDDLEVDNDPGMDQKAKKADDGDDGSAEVANGGEEEATGAKSSMPEVVDMTFSNIVHDVASREEQSGVTVPFYFICLLHLANEKGLRREGQEDLLDFSVASD 171
            R AK VDV++LKG +W  +  +   D A+       G+  +VDN   +++  K+               E EA G   S+    + TF N+V +VA +   S VTV FYFIC+LHLANEKGL  +GQ+DL +F +  +
Sbjct:  869 RFAKRVDVKKLKGSIWDHLEKKVIKDDAS-------GNADDVDNAVALNESGKRP-------------REHEAEGDDQSL----ETTFENVVENVAGKVP-SNVTVSFYFICVLHLANEKGLELKGQDDLRNFQIRKE 981          
BLAST of mRNA_P-littoralis_Contig1298.8.2 vs. uniprot
Match: W2R9G9_PHYPN (Condensin complex subunit 2 n=8 Tax=Phytophthora TaxID=4783 RepID=W2R9G9_PHYPN)

HSP 1 Score: 75.1 bits (183), Expect = 1.660e-12
Identity = 49/140 (35.00%), Postives = 75/140 (53.57%), Query Frame = 0
Query:   34 RKAKGVDVRRLKGDLWHKINTEF-QSDIAAAAMKVDGGDDLEVD-NDPGMDQKAKKADDGDDGSAEVANGGEEEATGAKSSMPEVVDMTFSNIVHDVASREEQSGVTVPFYFICLLHLANEKGLRREGQEDLLDFSVASD 171
            R AK VDV++LKG +W  +  +  + + A+  ++  G  D  V  N+ G   + ++ D+GD                      E ++ TF N+V +VA +   S VTV FYFIC+LHLANEKGL  +GQ+DL +F +  +
Sbjct:  874 RFAKRVDVKKLKGSIWDHLEKKVSKKENASDNVEATGDTDCAVALNESGKRPREEETDEGD----------------------ESLETTFENVVENVAGKVP-SNVTVSFYFICVLHLANEKGLELKGQDDLRNFQIRKE 990          
BLAST of mRNA_P-littoralis_Contig1298.8.2 vs. uniprot
Match: A0A225WHN4_9STRA (Condensin complex subunit 2 n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WHN4_9STRA)

HSP 1 Score: 74.7 bits (182), Expect = 2.150e-12
Identity = 50/135 (37.04%), Postives = 70/135 (51.85%), Query Frame = 0
Query:   34 RKAKGVDVRRLKGDLWHKINTEFQSDIAAAAMKVDGGDDLEVDNDPGMDQKAKKADDGDDGSAEVANGGEEEATGAKSSMPEVVDMTFSNIVHDVASREEQSGVTVPFYFICLLHLANEKGLRREGQEDLLDFSV 168
            R AK VDV++LKG +W  + T+      A + + D  D     N+ G   +  + D+ D G  E                   +D TF N+V +VA++   S VTV FYFIC+LHLANEKGL   GQ+DL +F +
Sbjct:  608 RFAKRVDVKKLKGSIWEHLETKV-----AKSGENDQTDSAVTINESGKRLRESEVDEKDAGDDEK------------------LDTTFENVVENVAAKVP-SNVTVSFYFICVLHLANEKGLELVGQDDLRNFQI 718          
BLAST of mRNA_P-littoralis_Contig1298.8.2 vs. uniprot
Match: A0A421FIJ8_9STRA (Condensin complex subunit 2 n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421FIJ8_9STRA)

HSP 1 Score: 73.6 bits (179), Expect = 5.710e-12
Identity = 52/140 (37.14%), Postives = 78/140 (55.71%), Query Frame = 0
Query:   34 RKAKGVDVRRLKGDLWHKINTE--FQSDIAAAAMKVDGGDDLEVDNDPGMDQKAKKADDGDDGSAEVANGGEEEATGAKSSMPEVVDMTFSNIVHDVASREEQSGVTVPFYFICLLHLANEKGLRREGQEDLLDFSVASD 171
            R AK VDV++LKG +W  +  +   ++D AA   + D  D  + D    +++  K+    +  + E A  G+EEA          +D TF N+V +V+ +   S VTV FYFIC+LHLANEKGL   GQ+DL +F +  +
Sbjct:  934 RFAKRVDVKKLKGSIWEHLEKKKAVKTDSAAKNDQPDEAD--KSDKAVTINESGKRP--RELNTNEEAEDGDEEA----------LDTTFENVVENVSGKVP-SNVTVSFYFICVLHLANEKGLELVGQDDLRNFQIRKE 1058          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1298.8.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LD70_ECTSI1.490e-4161.69Condensin complex subunit 2 n=1 Tax=Ectocarpus sil... [more]
A0A6H5K552_9PHAE7.240e-4159.33Condensin complex subunit 2 n=1 Tax=Ectocarpus sp.... [more]
A0A835Z1S3_9STRA2.170e-1639.13Condensin complex subunit 2 n=1 Tax=Tribonema minu... [more]
A0A7S1XKV0_9STRA2.650e-1438.57Condensin complex subunit 2 n=1 Tax=Phaeomonas par... [more]
A0A2P4XE75_9STRA3.070e-1437.06Condensin complex subunit 2 n=1 Tax=Phytophthora p... [more]
H3H3Y4_PHYRM1.050e-1339.33Condensin complex subunit 2 n=1 Tax=Phytophthora r... [more]
A0A329ST35_9STRA4.850e-1336.96Condensin complex subunit 2 n=2 Tax=Phytophthora T... [more]
W2R9G9_PHYPN1.660e-1235.00Condensin complex subunit 2 n=8 Tax=Phytophthora T... [more]
A0A225WHN4_9STRA2.150e-1237.04Condensin complex subunit 2 n=1 Tax=Phytophthora m... [more]
A0A421FIJ8_9STRA5.710e-1237.14Condensin complex subunit 2 n=3 Tax=Phytophthora k... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022816Condensin complex subunit 2/barrenPFAMPF05786Cnd2coord: 33..168
e-value: 3.8E-16
score: 59.0
IPR022816Condensin complex subunit 2/barrenPANTHERPTHR13108CONDENSIN COMPLEX SUBUNIT 2coord: 33..170
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 72..94
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 72..112
NoneNo IPR availablePANTHERPTHR13108:SF9CONDENSIN COMPLEX SUBUNIT 2coord: 33..170

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1298contigP-littoralis_Contig1298:21513..26373 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1298.8.2mRNA_P-littoralis_Contig1298.8.2Pylaiella littoralis U1_48mRNAP-littoralis_Contig1298 16676..28109 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig1298.8.2 ID=prot_P-littoralis_Contig1298.8.2|Name=mRNA_P-littoralis_Contig1298.8.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=179bp
MCTAICVSVNCFHVYRLSYVGLCLLLACLRSLARKAKGVDVRRLKGDLWH
KINTEFQSDIAAAAMKVDGGDDLEVDNDPGMDQKAKKADDGDDGSAEVAN
GGEEEATGAKSSMPEVVDMTFSNIVHDVASREEQSGVTVPFYFICLLHLA
NEKGLRREGQEDLLDFSVASDPVTGVSY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR022816Condensin_barren_su2