prot_P-littoralis_Contig1298.3.5 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig1298.3.5
Unique Nameprot_P-littoralis_Contig1298.3.5
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length554
Homology
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BLAST of mRNA_P-littoralis_Contig1298.3.5 vs. uniprot
Match: D7FUJ6_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUJ6_ECTSI)

HSP 1 Score: 58.9 bits (141), Expect = 5.050e-7
Identity = 24/39 (61.54%), Postives = 30/39 (76.92%), Query Frame = 0 
Query:    1 MIDVISKRCNHRGCTKQPSFGVAGTKTAEFCSGHAKDGM 39
            M+DV+SKRC H GCTK+PS+G  G+K AE C+ HA  GM
Sbjct:    1 MVDVVSKRCGHPGCTKRPSYGNDGSKKAELCAQHALQGM 39
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1298.3.5 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FUJ6_ECTSI5.050e-761.54EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR043822EsV-1-7 cysteine-rich motifPFAMPF19114EsV_1_7_cyscoord: 47..80
e-value: 0.0071
score: 16.9
coord: 237..270
e-value: 3.4E-4
score: 21.1
coord: 275..309
e-value: 4.7E-8
score: 33.4
coord: 199..232
e-value: 1.5E-9
score: 38.2
coord: 161..194
e-value: 0.065
score: 13.9
coord: 123..157
e-value: 2.9E-10
score: 40.5
coord: 9..43
e-value: 8.9E-10
score: 38.9
coord: 85..119
e-value: 4.4E-10
score: 39.9
NoneNo IPR availableGENE3D6.10.140.110coord: 25..69
e-value: 1.1E-8
score: 37.2
coord: 141..180
e-value: 1.0E-8
score: 37.3
coord: 252..313
e-value: 1.1E-8
score: 37.2
coord: 181..238
e-value: 8.1E-10
score: 40.8
coord: 101..140
e-value: 1.7E-6
score: 30.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 538..553
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 424..439
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 531..553
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 384..448

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1298contigP-littoralis_Contig1298:29242..31526 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1298.3.5mRNA_P-littoralis_Contig1298.3.5Pylaiella littoralis U1_48mRNAP-littoralis_Contig1298 28195..31566 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig1298.3.5 ID=prot_P-littoralis_Contig1298.3.5|Name=mRNA_P-littoralis_Contig1298.3.5|organism=Pylaiella littoralis U1_48|type=polypeptide|length=554bp
MIDVISKRCNHRGCTKQPSFGVAGTKTAEFCSGHAKDGMVDVRHKRCNHR
GCTKHPSFGVAGTKTPEFGLGHAKDGMVDVINKRCNHRGCTKWPSFGVAG
TKTAEFCSGHAKDGMVNVRNKSCTHHGCTKQPSFGVAGTKTAEFCSGHAK
DGMVDVRHKRCNHRGCTKHPSFGVAGTKTPEFGLGHAKDGMMDVINKRCN
HRGCTKWPSFGVAGTKTAEFCSGHAKDGMVDVIHKRCNHRGCTKHLIYGV
AGTKTVEFCSGHATDTMMDVINKRCNHHGCTKRASYGVAGTKTVEFCLGH
AKDGMVSVKAKKRCNHRGCTMLAKSSAVGKEQAEFCNEHVKGGNVDVVNE
RCAQPGFTTSPGFVVTGGIRTFCTRFPGQGTTDLTASKNRAGVHSGNSGG
ARGHGGVAVEGDTAQRAGASGKRRDRSPSSTQMGKSLCRSKRSRQMPVHT
YETKTPLETAVNGGHTPVGLGSLSEPENAGVKAEVEVSSKSDPARSSPFE
AVAWVTSAENGSCGEPDGAVKREVGISLPLKGSAAVGKLKPRRSKRVTGE
TRR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR043822EsV_1_7_cys