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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 0 |
| Start | 0 |
| Model size | 1079 |
| Hectar predicted targeting category | other localisation |
| Exons | 3 |
| Cds size | 1077 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680789579.330143-CDS-P-littoralis_Contig1296:22745..22995 | 1680789579.330143-CDS-P-littoralis_Contig1296:22745..22995 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig1296 22746..22995 - |
| 1680789579.339149-CDS-P-littoralis_Contig1296:23649..23774 | 1680789579.339149-CDS-P-littoralis_Contig1296:23649..23774 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig1296 23650..23774 - |
| 1680789579.3533432-CDS-P-littoralis_Contig1296:24105..24807 | 1680789579.3533432-CDS-P-littoralis_Contig1296:24105..24807 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig1296 24106..24807 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1296.5.3 >prot_P-littoralis_Contig1296.5.3 ID=prot_P-littoralis_Contig1296.5.3|Name=mRNA_P-littoralis_Contig1296.5.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=359bp
AAKGGGTADLPSLRDASAGKEATVQPAEPPAKNSDVEVAATAPTAAEEPL
GADEEASDLARTTGIQSALPQDEEGKEEEAVAIMEGQSYREYSAKDEASA
AESEAEPVSLGTEETGEAESEGTAPPPAPPTTIADASAAADQLVPGVDGE
EGAERAAPAAAAAAAVPHAPAVGGDAPGDILRGDTSVTAVVPGVINAGSD
GASVTAEPAGGGGVAALSSVGSATSLSGSTWDVETAPADARLSAPNAPPV
VPKKPKKNRFGLQRLKRAKRGKSSSNAHAAALDMPPAGLGASGSPPSGAP
DTSTSSVGAFSVDGSGNTDDTAGKAPSALPGDTKKMKKKGSFRLKLPSSL
KRGSKSSKL back to topmRNA from alignment at P-littoralis_Contig1296:22745..24807- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-littoralis_Contig1296.5.3 ID=mRNA_P-littoralis_Contig1296.5.3|Name=mRNA_P-littoralis_Contig1296.5.3|organism=Pylaiella littoralis U1_48|type=mRNA|length=2063bp|location=Sequence derived from alignment at P-littoralis_Contig1296:22745..24807- (Pylaiella littoralis U1_48)
GCAGCAAAAGGCGGCGGAACGGCAGATTTGCCCTCCCTGCGGGATGCTTC
CGCGGGCAAAGAAGCGACAGTGCAGCCGGCGGAACCTCCCGCCAAGAATA
GCGATGTCGAGGTTGCGGCGACGGCACCCACGGCTGCCGAGGAGCCTCTT
GGTGCAGACGAGGAAGCGTCAGACCTCGCAAGAACAACCGGTATTCAGTC
GGCCCTGCCTCAGGACGAGGAAGGAAAAGAAGAGGAAGCGGTGGCCATCA
TGGAGGGGCAGAGCTACCGAGAATATTCCGCAAAAGACGAAGCTTCCGCC
GCGGAGTCAGAAGCCGAGCCTGTTTCGCTCGGTACCGAGGAAACGGGCGA
AGCCGAGTCGGAAGGGACAGCTCCCCCGCCGGCGCCGCCCACCACGATTG
CCGATGCTTCGGCGGCCGCTGACCAACTCGTTCCTGGCGTGGACGGCGAG
GAAGGCGCCGAGAGGGCTGCACCGGCGGCGGCGGCGGCAGCAGCGGTGCC
CCACGCGCCAGCTGTGGGAGGAGACGCCCCGGGCGATATTCTTCGCGGTG
ACACGAGCGTGACAGCAGTAGTTCCGGGCGTGATCAACGCGGGAAGTGAC
GGCGCTTCCGTCACGGCGGAGCCGGCGGGTGGGGGTGGTGTGGCGGCCTT
GAGCAGTGTGGGTTCCGCCACCAGCCTGTCGGGCAGTACGTGGGATGTCG
AGGTAAGTCATGCCGGAACAACAGCAGGCAGCAGTACAGTAGTAGTGGCG
TGCCGTTGCGGATGGATGGTCTATTGGTCCGAATTGAACTGCCACTTCGC
ACCGAATGTAACAGAAGTAGGTGGATGTAGGTGGACACACATTTTGCCCG
TTCGTTGTCTAACATTCTCGGTCGTGTCGAGAGAGAGAACTTTTGTGTTC
ACGCATTTCCCCCCGTCAGGTGCAGACTACAAGCGGTAGGTAGGCTTGTG
AAATTGTCGTGGGGCAACCGAAAAACATTGGCGTTGTGCGTGTTTCGGCC
GCGTTTGGTGCCCGTTGGGCGTCTGTGCTGCAGACGGCGCCCGCAGATGC
GAGGTTATCCGCTCCCAACGCACCACCCGTGGTTCCGAAGAAGCCAAAGA
AAAACCGGTTCGGCCTCCAGCGCTTGAAACGGGCAAAAAGGGGAAAATCG
TCGTCAAAGAGTGAGGTGGGTCGCGCCCTCTTTGCAGATTTCATCAAAGC
CGTGTATCATAGCAGGACCACCCAACTCTCTCCCCCTATCGCTCTCTCTC
TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCGAACTTATCAATGT
TGGTTTGTACCCGACATATCGCGTGCTCTTGCTGGTGAGAGGTTGTGTGC
GGCTGCAAAAACCCTCCAGAATTGCGGTGAGGTGGAATGTTCATATCATA
TGATACAACTTTCGTGTGTTTGGAAACCCCCAAAACTTAGGACAGTTTTC
GTTTTGTGCATTGTGGTGTCAGAAAAAACGCCCACCAAAAGGAAAGCAAA
AACTCCTCGGGATGTATACATGGACTTGTATGAAAGCTCTGCTGTGTAGA
TTTGTTTGGTTTCCCCCGAGAAACTCGAAGCCCCTGCTGGGGGAGCCTCA
ATATTGAATTTCACACTTCGCCCTCTCTTTTTTTTTATCGAGGGGGGAGA
GGGATTTTTTTTTCGGGGGGGGGGGGCTTTCAAGGGTTGCTTGGTTTTCT
ATTGGACATGCACGTATCAGACGCCCACCGGCCATTTCGTCACCGCAAAG
CGCGAACGGTCTCTCCCTCGGGTTGGTTCGTGGCAGGTGCCGTCCGACGA
TGCTCCGGTGGATGCCCACGCGGCAGCCCTGGACATGCCGCCGGCCGGCC
TCGGCGCGAGCGGCTCGCCACCGTCGGGGGCGCCGGACACCTCCACGTCG
TCGGTGGGAGCCTTTTCGGTGGATGGCAGCGGTAACACGGACGACACCGC
CGGCAAGGCCCCGAGTGCGCTGCCGGGGGATACGAAGAAGATGAAGAAGA
AGGGCAGCTTCAGACTAAAGTTGCCTTCGAGCCTGAAAAGGGGCAGCAAG
TCATCGAAGCTCG back to topCoding sequence (CDS) from alignment at P-littoralis_Contig1296:22745..24807- >mRNA_P-littoralis_Contig1296.5.3 ID=mRNA_P-littoralis_Contig1296.5.3|Name=mRNA_P-littoralis_Contig1296.5.3|organism=Pylaiella littoralis U1_48|type=CDS|length=1077bp|location=Sequence derived from alignment at P-littoralis_Contig1296:22745..24807- (Pylaiella littoralis U1_48)
GCAGCAAAAGGCGGCGGAACGGCAGATTTGCCCTCCCTGCGGGATGCTTC
CGCGGGCAAAGAAGCGACAGTGCAGCCGGCGGAACCTCCCGCCAAGAATA
GCGATGTCGAGGTTGCGGCGACGGCACCCACGGCTGCCGAGGAGCCTCTT
GGTGCAGACGAGGAAGCGTCAGACCTCGCAAGAACAACCGGTATTCAGTC
GGCCCTGCCTCAGGACGAGGAAGGAAAAGAAGAGGAAGCGGTGGCCATCA
TGGAGGGGCAGAGCTACCGAGAATATTCCGCAAAAGACGAAGCTTCCGCC
GCGGAGTCAGAAGCCGAGCCTGTTTCGCTCGGTACCGAGGAAACGGGCGA
AGCCGAGTCGGAAGGGACAGCTCCCCCGCCGGCGCCGCCCACCACGATTG
CCGATGCTTCGGCGGCCGCTGACCAACTCGTTCCTGGCGTGGACGGCGAG
GAAGGCGCCGAGAGGGCTGCACCGGCGGCGGCGGCGGCAGCAGCGGTGCC
CCACGCGCCAGCTGTGGGAGGAGACGCCCCGGGCGATATTCTTCGCGGTG
ACACGAGCGTGACAGCAGTAGTTCCGGGCGTGATCAACGCGGGAAGTGAC
GGCGCTTCCGTCACGGCGGAGCCGGCGGGTGGGGGTGGTGTGGCGGCCTT
GAGCAGTGTGGGTTCCGCCACCAGCCTGTCGGGCAGTACGTGGGATGTCG
AGACGGCGCCCGCAGATGCGAGGTTATCCGCTCCCAACGCACCACCCGTG
GTTCCGAAGAAGCCAAAGAAAAACCGGTTCGGCCTCCAGCGCTTGAAACG
GGCAAAAAGGGGAAAATCGTCGTCAAATGCCCACGCGGCAGCCCTGGACA
TGCCGCCGGCCGGCCTCGGCGCGAGCGGCTCGCCACCGTCGGGGGCGCCG
GACACCTCCACGTCGTCGGTGGGAGCCTTTTCGGTGGATGGCAGCGGTAA
CACGGACGACACCGCCGGCAAGGCCCCGAGTGCGCTGCCGGGGGATACGA
AGAAGATGAAGAAGAAGGGCAGCTTCAGACTAAAGTTGCCTTCGAGCCTG
AAAAGGGGCAGCAAGTCATCGAAGCTC back to top
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