prot_P-littoralis_Contig1294.12.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig1294.12.1
Unique Nameprot_P-littoralis_Contig1294.12.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length88
Homology
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BLAST of mRNA_P-littoralis_Contig1294.12.1 vs. uniprot
Match: A0A6H5JXZ5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXZ5_9PHAE)

HSP 1 Score: 82.8 bits (203), Expect = 1.580e-17
Identity = 36/73 (49.32%), Postives = 50/73 (68.49%), Query Frame = 0 
Query:    6 KDPPRGCQLCLCDVGGYPSIGIPTDEKDDRGYTVWENYRGVFSHCAGARSRDGKTFKNATVASGDIVGKRCLC 78
             DPP  CQLCL  VGG PS+G+ + EK+ +G   W N    ++ C GA++ DG+ +KNAT+A+GDIVG+ C C
Sbjct:   77 SDPPI-CQLCLTSVGGTPSLGVLSGEKNSQGRDEWLNIHACWTICCGAKTSDGEKYKNATLATGDIVGRACKC 148
[Close]
BLAST of mRNA_P-littoralis_Contig1294.12.1 vs. uniprot
Match: A0A6H5JLP4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLP4_9PHAE)

HSP 1 Score: 83.2 bits (204), Expect = 4.200e-17
Identity = 38/79 (48.10%), Postives = 53/79 (67.09%), Query Frame = 0 
Query:    3 LASKDP-PRGCQLCLCDVGGYPSIGIPTDEKDDRGYTVWENYRGVFSHCAGARSRDGKTFKNATVASGDIVGKRCLCWD 80
            L+ + P P  C+LCL  VGG PS+G+ + EK D+G   W N   V+  CAGA + DG  +KNAT+A+G+IVG+ C C+D
Sbjct:   72 LSERGPNPVKCELCLTPVGGTPSLGVLSGEKTDQGRGEWLNIHAVWKLCAGATTSDGGKYKNATLATGEIVGRPCSCFD 150
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1294.12.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JXZ5_9PHAE1.580e-1749.32Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JLP4_9PHAE4.200e-1748.10Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1294contigP-littoralis_Contig1294:24906..25932 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1294.12.1mRNA_P-littoralis_Contig1294.12.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig1294 24906..25948 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig1294.12.1 ID=prot_P-littoralis_Contig1294.12.1|Name=mRNA_P-littoralis_Contig1294.12.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=88bp
MLLASKDPPRGCQLCLCDVGGYPSIGIPTDEKDDRGYTVWENYRGVFSHC
AGARSRDGKTFKNATVASGDIVGKRCLCWDGKTAVSKD
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