mRNA_P-littoralis_Contig1294.1.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig1294.1.1
Unique NamemRNA_P-littoralis_Contig1294.1.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig1294.1.1 vs. uniprot
Match: D7FPL2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPL2_ECTSI)

HSP 1 Score: 813 bits (2101), Expect = 5.780e-285
Identity = 449/630 (71.27%), Postives = 485/630 (76.98%), Query Frame = 1
Query:    1 VCRHWLRGLCMIGDSCGYLHKMDRNRMPICRWRTDCQVEGCAFRHEEEQEAPECAMYQQGFCRQGPTCRFRHVKRAREDCPEVADFSLVNPTSFPSNSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDHAMGGMRSTKNQMCKYWANGGKCPWAGGCNYAHGEEELRR-------GGGFGSRFEPRKDPLTDPEIEAIVPVKEGEKARFFVLRSLNHDNLAVSAVQKKWYARRYNVLPFNQAFEGVGRVFFFFTVNYSSNFQGCAEMTSAVPPMGPHPKEEQIAEFSVKWLRLCELPFSIADQVTNSLQNNLPVSRASHGMEVPYDAGRKLCKLMWAQPEVDLSPKVVKHAAEAPFTGVLVARTGPRGGNSGGPPGMMEPPHKIARVAGPPIGGGDXXXXXXXXXXSLQLPQQXXXXXXXXXXXXQTQ-------------------HFDGPPGFLFEIESQHFDECVGKLLFGLPARLPPQAQDTIQPGNPMFLWDPGNGLVLGIFRAVSCLSELIDRTAWALPGMETPLPWQVRVAVDLKAPPIKAGEPVLREVFRGGIVEPGALDPRQADVLASTMAGRLRPPPPGVGPGLPPP---VLGGDMGP-GFNGPGVGSI 1800
            VCRHWLRGLCMIGDSCGYLHKMDRNRMPICRWRTDCQVEGCAFRHEEEQEAPECAMYQQGFCRQGPTCRFRHVKRAREDCPEVADFSL NPTS  SNS                XXXXXXXXXXXXXXXXXXX     +HA  G    KNQMCKYW +G KCPW   CNYAHGEE+ RR       GG        RKDPLTDP+IEAIVPVK+GEKARFFVLRSLNHDNLAVSAVQ KWYARR+N++PFN AF+G GR FFFFTVN S+NFQGCAEMTS VP MGP  +EEQ+ EFSVKWLRLCELPFS+A QV N  Q+NLP+ RASHGME+PY+AGRKLCKLMWAQPE+DL   VV+ A +APF+GVL AR+   GGN  GPPGM  P + + RV GPP+GGG                  XXXXXXXXXXXX                       FDGPPGFLFEIES+ FDECVGKLLFGLPARLPP A D IQPGNP+FLWDPGNGLVLGIFRAVS LSE ID TAWA PGMETPLPWQVRV+VDLKAPPIKAGEP++REVFR G+VEPGALDPRQAD+LASTMAGR+RPPPPGV P +P P   V+  D+GP GFNGP VG  
Sbjct:   36 VCRHWLRGLCMIGDSCGYLHKMDRNRMPICRWRTDCQVEGCAFRHEEEQEAPECAMYQQGFCRQGPTCRFRHVKRAREDCPEVADFSLANPTSLHSNSAGGRAIPPGGFSRSFGXXXXXXXXXXXXXXXXXXX-----EHA--GRYFGKNQMCKYWTSGTKCPWGDACNYAHGEEDPRRDKGSGGVGGXXXXXXXXRKDPLTDPDIEAIVPVKDGEKARFFVLRSLNHDNLAVSAVQNKWYARRFNIMPFNSAFDGPGRAFFFFTVNQSNNFQGCAEMTSRVPQMGPRTEEEQVMEFSVKWLRLCELPFSVASQVKNPSQDNLPIWRASHGMEIPYEAGRKLCKLMWAQPEIDLPQHVVQQAKDAPFSGVLPARSPASGGNPTGPPGMRXPXNNLVRVGGPPLGGGAPGGVEGVSGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQVPPQFDGPPGFLFEIESEFFDECVGKLLFGLPARLPPHAHDAIQPGNPLFLWDPGNGLVLGIFRAVSGLSERIDGTAWARPGMETPLPWQVRVSVDLKAPPIKAGEPIIREVFRSGMVEPGALDPRQADILASTMAGRMRPPPPGVVP-VPGPAVAVVPRDVGPPGFNGPVVGGX 657          
BLAST of mRNA_P-littoralis_Contig1294.1.1 vs. uniprot
Match: D0NFE9_PHYIT (Uncharacterized protein n=12 Tax=Phytophthora TaxID=4783 RepID=D0NFE9_PHYIT)

HSP 1 Score: 254 bits (648), Expect = 3.230e-70
Identity = 185/617 (29.98%), Postives = 259/617 (41.98%), Query Frame = 1
Query:    1 VCRHWLRGLCMIGDSCGYLHKMDRNRMPICRWRTDCQVEGCAFRHEEEQEAPECAMYQQGFCRQGPTCRFRHVKRAREDCPEVADFSLVNPTSFPSNSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDHAMGGMRSTKNQMCKYWANGGKCPWAGGCNYAHGEEELRR----------------GGGFGSRFEPRKDPLTDPEIEAIVPVKEGEKARFFVLRSLNHDNLAVSAVQKKWYARRYNVLPFNQAFEGVGRVFFFFTVNYSSNFQGCA----------------EMTSAVPPMGPHPKEEQIAEFSVKWLRLCELPFSIADQVTNSLQNNLPVSRASHGMEVPYDAGRKLCKLMWAQPEVDLSPKVVKHAAEAPFTGVLVARTGPRGGNSGGPPGMMEPPHKIARVAGPPIGGGDXXXXXXXXXXSLQLPQQXXXXXXXXXXXXQTQHFDGPPGFLFEIESQHFDECVGKLLFGLPARLPPQAQDTIQPGNPMFLWDPGNGLVLGIFRAVS-CLSELIDRTAWALPGMETPLPWQVRVAVDLKAPPIKAGEPVLREVFRGGIVEPGALD----PRQADVLASTMAGRLRPPPPGVGPGLP 1740
            VCRHWLR LCM GD+C +LH+ D ++MP CRW  +CQV  C FRH  ++E  ECA Y+QGFC  G +CR+RH+K ARE+CPE ADF+L    +   N                                                   K  +CK+W   G CP+   C++AHGE ELR                 GG  G  F     P   P     +P  +G+ A++F+L+S ++ NLA S   ++W      +     A E    VF FF V  S ++QG A                ++ + V P     K E    F ++WLR+CE P+    Q  N     L VS   +G E+  + G  L +L++ QP++ L  + V+  ++ P     +A        S                AGP  GG                P Q                    PGF+F   +Q  DEC G++LFGL       AQ  + PG P+FL +  +  +LGIF AVS  +  ++       P M +P P Q R AV L AP +   +P ++ V     V+ G L      + ADV A        P  P +GPG P
Sbjct:   64 VCRHWLRALCMKGDNCEFLHQYDMSKMPECRWGMECQVPECPFRHVPDEERVECAFYKQGFCSHGSSCRYRHIKLAREECPETADFALQAKVADEENVKRRKAQPVNEFF--------------------------------------KIAICKHWEKMGSCPFGDECHFAHGETELRPFPKGEKEEKEARAGRPGGHQGPAFNGGDRPHQGPPPGPQLP-DDGKMAKYFLLQSASYLNLAHSVHHERWAVPPAVLQQIKMASETSDEVFLFFAVGPSKHYQGVARLVNGAMSSADASAGEDLAAGVVPYEADGKAEWAGSFGIEWLRICECPWERLAQFENK---QLAVSECPNGQELDAETGHALVRLLFNQPQIQLHYRSVEDESKLPGGAEELATRRREAAES-----------LFGAPAGPGFGG----------PAPRWQPSQ--------------------PGFVFACTTQTIDECFGRMLFGLAQEHEGLAQQHVTPGTPLFLLNQSDQHLLGIFEAVSPAIVNMMPGAFCHGPNMPSPFPVQTRFAVMLNAPALPTSDPQIKRVIGDNGVDVGPLSLQATQQLADVFAERSGAAFPPNGPPMGPGGP 597          
BLAST of mRNA_P-littoralis_Contig1294.1.1 vs. uniprot
Match: H3GWX4_PHYRM (Uncharacterized protein n=2 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GWX4_PHYRM)

HSP 1 Score: 249 bits (637), Expect = 1.950e-67
Identity = 190/629 (30.21%), Postives = 264/629 (41.97%), Query Frame = 1
Query:    1 VCRHWLRGLCMIGDSCGYLHKMDRNRMPICRWRTDCQVEGCAFRHEEEQEAPECAMYQQGFCRQGPTCRFRHVKRAREDCPEVADFSLVNPTSFPSNSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDHAMGGMRSTKNQMCKYWANGGKCPWAGGCNYAHGEEELR------------RGGGFGSRFE----------PRKDPLTDPEIEAIVPVKEGEKARFFVLRSLNHDNLAVSAVQKKWYARRYNVLPFNQAFEGVGRVFFFFTVNYSSNFQGCAEMTSA----------------VPPMGPHPKEEQIAEFSVKWLRLCELPFSIADQVTNSLQNNLPVSRASHGMEVPYDAGRKLCKLMWAQPEVDLSPKVVKH------AAEAPFTGVLVARTGPRGGNSGGPPGMMEPPHKIARVAGPPIGGGDXXXXXXXXXXSLQLPQQXXXXXXXXXXXXQTQHFDGPPGFLFEIESQHFDECVGKLLFGLPARLPPQAQDTIQPGNPMFLWDPGNGLVLGIFRAVS-CLSELIDRTAWALPGMETPLPWQVRVAVDLKAPPIKAGEPVLREVFRGGIVEPGALD----PRQADVLASTMAGRLRPPPPGVGPGLP 1740
            VCRHWLR LCM GD+C +LH+ D ++MP CRW  +CQV  C FRH  ++E  ECA Y+QGFC  G +CR+RH+K ARE+CPE ADF+L    +   N                                                   K  +CK+W   G CP+   C++AHG+ ELR            RGG  G               R  P   P++       EG+ A++ +++S ++ NLA +    KW      +     A E    VF FF+V  S +FQG A + S                 + P     K E    F V+WLR+CE P+    Q  N +   L V +  +G E+  + G  L +L++ Q ++ L  + V+        AE   T    A     GG +G  PG   PP +                                           TQ     PGF+F   SQ  DEC G+LLFGL       AQ  + PG P+FL +  +  +LGIF AVS  + +++       P M +PLP Q R AV L AP +   +P +++V     V+ G L      + ADV A    G   P  P +GPG P
Sbjct:   64 VCRHWLRALCMKGDNCEFLHQYDMSKMPECRWGMECQVPECPFRHVPDEERVECAFYKQGFCSHGSSCRYRHIKLAREECPETADFALQAKVADEENVKRRKAQPVNEFF--------------------------------------KIAICKHWEKMGSCPFGDECHFAHGQTELRPFPKGEKEEQAARGGRHGGDHPGRGAQSFSGGERHQPPQGPQLP-----DEGKMAKYVLVQSASYLNLAHAVHFGKWAVPAEVLQQVKMASETADEVFLFFSVGPSKHFQGVARLVSGTMANVDTSAGEDLATGIVPYEADGKTEWSGAFGVEWLRICECPWERLAQFENKI---LDVPQCPNGHELDAETGHALMRLLFNQAKIQLHYRSVEDEPKLYGGAEELATRRREAAESLAGGPAGPGPGFGGPPQR----------------------------------------WRATQ-----PGFVFTCTSQTIDECFGRLLFGLAKEQEALAQQHVTPGTPLFLLNLSDQHLLGIFEAVSPAVVDMMPGAFCTGPNMPSPLPIQARFAVMLNAPALPTSDPQIKQVIGENGVDVGPLSLQVTQQLADVFAERSGGGFPPNGPPMGPGGP 601          
BLAST of mRNA_P-littoralis_Contig1294.1.1 vs. uniprot
Match: A0A0P1AE75_PLAHL (Cleavage and polyadenylation specificity factor cpsf30-like n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AE75_PLAHL)

HSP 1 Score: 243 bits (620), Expect = 3.400e-65
Identity = 174/599 (29.05%), Postives = 259/599 (43.24%), Query Frame = 1
Query:    1 VCRHWLRGLCMIGDSCGYLHKMDRNRMPICRWRTDCQVEGCAFRHEEEQEAPECAMYQQGFCRQGPTCRFRHVKRAREDCPEVADFSLVNPTSFPSNSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDHAMGGMRSTKNQMCKYWANGGKCPWAGGCNYAHGEEELR--------------RGGGFGSRFEPRKDPLTDPEIEAIVPVKEGEKARFFVLRSLNHDNLAVSAVQKKWYARRYNVLPFNQAFEGVGRVFFFFTVNYSSNFQGCAEMTSA----------------VPPMGPHPKEEQIAEFSVKWLRLCELPFSIADQVTNSLQNNLPVSRASHGMEVPYDAGRKLCKLMWAQPEVDLSPKVVKHAAEAPFTGVLVARTGPRGGNSGGPPGMMEPPHKIAR-VAGPPIGGGDXXXXXXXXXXSLQLPQQXXXXXXXXXXXXQTQHFDGPPGFLFEIESQHFDECVGKLLFGLPARLPPQAQDTIQPGNPMFLWDPGNGLVLGIFRAVS-CLSELIDRTAWALPGMETPLPWQVRVAVDLKAPPIKAGEPVLREVFRGGIVEPGALDPRQADVLASTMAGR 1701
            VCRHWLR LCM GD+C +LH+ D ++MP CRW  +CQV  C FRH  ++E  ECA Y+QGFC  G +CR+RH+K ARE+CPE ADF+L +  +   N                                                   K  +CK+W   G CP+   C++AHG+ ELR                      F   ++ ++ P +       EG+ A++F+++S ++ NLA S   ++W            A E    +F FFTV  S ++QG A + +                 V P     K + +  FS++WLR+CE P+    Q  N L   L V    +G E+  D G  L +L++ QP++ L  + V+   +                  GG   +     + A  + G PIG G           +   P +             TQ     PGF+F   +Q  DEC G++LFGLP      AQ  + PG P++L +  +  +LGIF A+S  L  ++       P M +P P Q R AV L AP +   +P +++V     ++ G L  +    LA   A R
Sbjct:   64 VCRHWLRALCMKGDNCEFLHQYDMSKMPECRWGMECQVPECPFRHVPDEERVECAFYKQGFCSHGSSCRYRHIKLAREECPETADFALQSKVADEENVKRRKAQPVNEFF--------------------------------------KIAICKHWEKVGSCPFGDECHFAHGDMELRPFPKGEKEXXXXXXXXXXXXXGFHEAREVISGPPLP-----DEGKMAKYFLVQSASYLNLAHSVHYQQWSVPSGIAQQIKMAAEASYEIFLFFTVGSSKHYQGVARVVNEAIGDYDTSVGEDLALNVVPYEADGKCKWMGAFSIEWLRICECPWDRLAQFENKL---LTVPECPNGHELDSDTGHSLVRLLYNQPQIQLHYRSVEDEMKL----------------LGGAEELATRRREAAESLFGAPIGPG----------FNGSAPPRWKV----------TQ-----PGFVFTCVAQTIDECFGRMLFGLPLEQDTLAQQHVSPGTPLYLLNLSDQHLLGIFEAISPALVNMMPGAFCHGPNMSSPFPVQARFAVMLNAPALPISDPQIKQVLGDNKLDAGPLSLQITQQLADIFAER 575          
BLAST of mRNA_P-littoralis_Contig1294.1.1 vs. uniprot
Match: A0A6A3FD54_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A6A3FD54_9STRA)

HSP 1 Score: 241 bits (615), Expect = 1.940e-64
Identity = 179/616 (29.06%), Postives = 254/616 (41.23%), Query Frame = 1
Query:    1 VCRHWLRGLCMIGDSCGYLHKMDRNRMPICRWRTDCQVEGCAFRHEEEQEAPECAMYQQGFCRQGPTCRFRHVKRAREDCPEVADFSLVNPTSFPSNSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDHAMGGMRSTKNQMCKYWANGGKCPWAGGCNYAHGEEELR--------------------RGGGFGSRFEPRKDPL--TDPEIEAIVPVKEGEKARFFVLRSLNHDNLAVSAVQKKWYARRYNVLPFNQAFEGVGRVFFFFTVNYSSNFQGCAEMTS----------------AVPPMGPHPKEEQIAEFSVKWLRLCELPFSIADQVTNSLQNNLPVSRASHGMEVPYDAGRKLCKLMWAQPEVDLSPKVVKHAAEAPFTGVLVARTGPRGGNSGGPPGMMEPPHKIARVAGPPIGGGDXXXXXXXXXXSLQLPQQXXXXXXXXXXXXQTQHFDGPPGFLFEIESQHFDECVGKLLFGLPARLPPQAQDTIQPGNPMFLWDPGNGLVLGIFRAVS-CLSELIDRTAWALPGMETPLPWQVRVAVDLKAPPIKAGEPVLREVFRGGIVEPGALDPRQADVLASTMAGRLRPPPPGVGP 1731
            VCRHWLR LCM GD+C +LH+ D ++MP CRW  +CQV  C FRH  ++E  ECA Y+QGFC  G +CR+RH+K ARE+CPE ADF+L +  +   N                                                   K  +CK+W   G CP+   C++AHGE ELR                    +G  F S       P     P     +P  +G+ A++ +L+S ++ NLA S    +W A    +     A E    VF FF V  S +FQG A + S                AV P     K E    F V+WLR+CE P+    Q  N    +L V   ++G E+  D G  L +L++ QP++ L  + V+   + P     +A        S            +   + P  GG                                 +     PGF+F   +Q  DEC G++LFGL       AQ  + PG P+FL +  +  +LG+F AVS  +  ++       P M +P P Q R  V L+AP + A +P +++      V  G L  +    L    A R  P  P  GP
Sbjct:   64 VCRHWLRALCMKGDNCEFLHQYDMSKMPECRWGMECQVPECPFRHVPDEERVECAFYKQGFCSHGSSCRYRHIKLAREECPETADFALQSKVADEENVKRRKAQPVNEFF--------------------------------------KIAICKHWEKMGSCPFGDECHFAHGETELRPFPKGEKEXXXXXXXXXXXXQGPAFTSTSSSNAPPERHNQPPPGPQLP-DDGKMAKYVLLQSASYLNLAHSVHHGRWAAPASVLQQLKVASETSDEVFLFFAVGPSKHFQGVARLVSGAMASIDTSTGEDLSAAVVPYEADGKTEWTGAFGVEWLRICECPWERLAQFENK---HLAVPECTNGHELDADTGHALVRLLYNQPQIQLHYRSVEDEPKLPGGAEELATRRREAAES-----------LVGAPSAPGFGG------------------------------PAARWKPSGPGFVFSCTTQMIDECFGRMLFGLEKEQESLAQQHVTPGTPLFLLNLSDQHILGVFEAVSPAIVNMMPGAFCHGPNMPSPFPVQARFNVVLQAPALPASDPQVKQALGDVGVAVGPLSMQVTQQLVDVFAERGAPAFPSNGP 596          
BLAST of mRNA_P-littoralis_Contig1294.1.1 vs. uniprot
Match: A0A8K1FJ65_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FJ65_PYTOL)

HSP 1 Score: 239 bits (610), Expect = 9.310e-64
Identity = 182/620 (29.35%), Postives = 262/620 (42.26%), Query Frame = 1
Query:    1 VCRHWLRGLCMIGDSCGYLHKMDRNRMPICRWRTDCQVEGCAFRHEEEQEAPECAMYQQGFCRQGPTCRFRHVKRAREDCPEVADFSLVNPTSFPSNSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDHAMGGMRSTKNQMCKYWANGGKCPWAGGCNYAHGEEELR----------RGG---------------GFGSRFEPRKDPLTDPEIEAIVPVKEGEKARFFVLRSLNHDNLAVSAVQKKWYARRYNVLPFNQAFEGVGRVFFFFTVNYSSNFQGCA----------------EMTSAVPPMGPHPKEEQIAEFSVKWLRLCELPFSIADQVTNSLQNNLPVSRASHGMEVPYDAGRKLCKLMWAQPEVDLSPKVVKHAAEAPFTGVLVARTGPRGGNSGGPPGMMEPPHKIARVAGPPIGGGDXXXXXXXXXXSLQLPQQXXXXXXXXXXXXQTQHFDGPPGFLFEIESQHFDECVGKLLFGLPARLPPQAQDTIQPGNPMFLWDPGNGLVLGIFRAVS-CLSELIDRTAWALPGMETPLPWQVRVAVDLKAPPIKAGEPVLREVF--RGGIVEPGALDPRQ--ADVLASTMAGRL--RPPP 1716
            VCRHWLRGLCM GD+C +LH+ D ++MP CRW  +CQV  C FRH  ++E  ECA Y+QGFC  GP CR+RH+K ARE+CPE ADFSL +  +   N                                                   K  +CK+W   G CP+   C++AHGE+ELR           GG               G G+   P     T P    +V   EG+  ++F++ S ++ N+A      +W   R        A E    VF +FTV+ S +FQG A                +++ ++ P     K      F ++WLR+CE P+    +  N    NL V+  S+G E+  + G+ + +L++  P++ L  + V+   + P                    G  E      R A   I GG                                      PGF+F     + DE  G++L GL +     A  +I PG P+FL +  +  +LG+F A+S  +  L+       P   +PLP QVR  V L AP I + EP ++ +F  RG  V P AL   Q  ADV +   AG +  +PPP
Sbjct:   47 VCRHWLRGLCMKGDNCEFLHQYDMSKMPECRWGMECQVPECPFRHVPDEERVECAFYKQGFCSHGPNCRYRHIKLAREECPETADFSLQSKVADEENVKRRKAQPVNEFY--------------------------------------KIAICKHWEKMGTCPFGDDCHFAHGEKELRPFPKGERDARHGGPXXXXXXXXXXXXXXGMGASKGPESAAPTGPP--PVVLPDEGKFCKYFIVPSFSYHNVAHGVHFNQWSLPRELQQTLKFASETSDDVFLYFTVSSSKHFQGVARLVPGALIQAGSEEGEDLSMSLVPYQSDNKGAWSGAFGIEWLRICECPWERLMEYENQ---NLAVNECSNGQELEPEVGQAIMRLIFNSPQIQLHYRSVEDEQKLP--------------------GGAEELATRRREAAESIFGGPAPKWKVTT-----------------------------PGFVFACNHTNIDEVFGRMLMGLGSEHEAVATKSITPGTPLFLVNMADRHILGVFEAISPAVVNLMPGAFSHGPQQPSPLPVQVRFVVALNAPAINSAEPQIKAIFGDRGIQVGPLALQATQRLADVFSERCAGPMFNQPPP 574          
BLAST of mRNA_P-littoralis_Contig1294.1.1 vs. uniprot
Match: A0A5D6XNC2_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XNC2_9STRA)

HSP 1 Score: 236 bits (602), Expect = 3.100e-62
Identity = 200/649 (30.82%), Postives = 275/649 (42.37%), Query Frame = 1
Query:    1 VCRHWLRGLCMIGDSCGYLHKMDRNRMPICRWRTDCQVEGCAFRHEEEQEAPECAMYQQGFCRQGPTCRFRHVKRAREDCPEVADFSLVNPTSFPSNSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDHAMGGMRSTKNQMCKYWANGGKCPWAGGCNYAHGEEELR---------RGGGF-------------------------------GSRFEPRKDPLTDPEIEAIVPVKEGEKARFFVLRSLNHDNLAVSAVQKKWYARRYNVLPFNQAFEGVGRVFFFFTVNYSSNFQGCA----------------EMTSAVPPMGPHPKEEQIAEFSVKWLRLCELPFSIADQVTNSLQNNLPVSRASHGMEVPYDAGRKLCKLMWAQPEVDLSPKVVKHAAEAPFTGVLVARTGPRGGNS--GGPPGMMEPPHKIARVAGPPIGGGDXXXXXXXXXXSLQLPQQXXXXXXXXXXXXQTQHFDGPPGFLFEIESQHFDECVGKLLFGLPARLPPQAQDTIQPGNPMFLWDPGNGLVLGIFRAVS-CLSELIDR--TAWALPGMETPLPWQVRVAVDLKAPPIKAGEPVLREVFRGGIVEPGALDPRQADVLASTMAGRLR---PPPPGV--GPGLPPPV 1749
            VCRHWLR LCM GDSC +LH+ D +RMP CRW  +CQV  C FRH  ++E  ECA Y+QGFC  G +CR+RH+K ARE+CP++ADF+L    +   N                                                   K  +CK+W   G CP+   C++AHGE+ELR         RGGG                                G+ F P +     P   A+V   E +  ++F++ S ++ NLA      +W            A E    VF   TV+ S +FQG A                ++ +A  P     K +    F V+WLR+CE P+    Q  N     L V+   +G E+  D G  L +L++ Q ++ L  K V+   + P     +A        S  GGP              G P+ G  XXXXXXXXXX    P+                     PGF+F   +   DEC G+++FGL       A   + PG P+FL +  +  VLGIF A S  ++ LI    T+ + P   +P P QVR AV L AP I + EP ++ +     +  GAL       LA   A R     P PPG   G G+PPP+
Sbjct:   47 VCRHWLRALCMKGDSCEFLHQYDMSRMPECRWGMECQVPECPFRHVPDEERVECAFYKQGFCSHGASCRYRHIKLAREECPDMADFTLQAKVADEENVKRRKAQPVNEFY--------------------------------------KIAICKHWEKQGNCPFGDECHFAHGEKELRPFPKGEKDPRGGGXXXXXXXXXXXRDSHXXXXXGPRXXXXXXXXXGAGFAPLERQQAPPP--ALVLPDENKLCKYFLVHSQSYGNLAHGVHFSQWAVPSATARALKLASETSDDVFLVVTVSPSRHFQGLARLAAGAMLQAGADDGEDLAAANVPYQSDGKTQWAGAFGVEWLRICECPWERLQQFENK---QLAVAECPNGQELDTDMGHALVRLLFNQAQIQLHYKSVEDEQQLPGGAAELAARRRDAAESLFGGP--------------GGPLPGPLXXXXXXXXXXXXXTPRWKVSL----------------PGFVFACNNATIDECFGRMVFGLAKDQEANAAKHVVPGAPLFLLNMSDRHVLGIFEAASPVMANLIPGAFTSSSAPNAPSPFPVQVRFAVALNAPAISSAEPQIKHIVGDRGMRMGALSLEVTQQLADAFAERCSAVFPAPPGGPRGLGMPPPL 622          
BLAST of mRNA_P-littoralis_Contig1294.1.1 vs. uniprot
Match: A0A3M6VWE6_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VWE6_9STRA)

HSP 1 Score: 234 bits (597), Expect = 9.550e-62
Identity = 186/653 (28.48%), Postives = 269/653 (41.19%), Query Frame = 1
Query:    1 VCRHWLRGLCMIGDSCGYLHKMDRNRMPICRWRTDCQVEGCAFRHEEEQEAPECAMYQQGFCRQGPTCRFRHVKRAREDCPEVADFSLVNPTSFPSNSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDHAMGGMRSTKNQMCKYWANGGKCPWAGGCNYAHGEEELR---------------RGGGF------GSRFEPRKDPLTDPEIEAIVPVKEGEKARFFVLRSLNHDNLAVSAVQKKWYARRYNVLPFNQAFEGVGRVFFFFTVNYSSNFQGCA----------------EMTSAVPPMGPHPKEEQIAEFSVKWLRLCELPFSIADQVTNSL---------QNNLPV---------------SRASHGMEVPYDAGRKLCKLMWAQPEVDLSPKVVKHAAEAPFTGVLVARTGPRG-----GNSGGPPGMME--PPHKIARVAGPPIGGGDXXXXXXXXXXSLQLPQQXXXXXXXXXXXXQTQHFDGPPGFLFEIESQHFDECVGKLLFGLPARLPPQAQDTIQPGNPMFLWDPGNGLVLGIFRAVS-CLSELIDRTAWALPGMETPLPWQVRVAVDLKAPPIKAGEPVLREVF--RGGIVEPGALDPRQ--ADVLASTMAGRLRPPPPGVGPGLP 1740
            VCRHWLR LCM GD+C +LH+ D ++MP CRW  +CQV  C FRH  ++E  ECA Y+QGFC  G +CR+RH+K ARE+CPE ADF+L +  +   N                                                   K  +CK+W   G CP+   C++AHG+ ELR               R GG+      G+ F   + P     +   +P  +G++ ++F+++S ++ NLA S   K W      + P   A E    VF FFTV  S ++QG A                ++ + + P     K      F ++WLR+CE P+    Q  N L           NL V                 + +G E+  + G  L +L++ QP++ L  + V+   + P     +A           G  GG PG     P  K+ +                                               PGF+F   S+  DEC G+LLFGL       AQ  ++PG P+FL +  +  +LGIF AVS  +  ++       P M +P P Q R AV L AP +   +P +++V    G  V P +L   Q  ADV A        P  P +GPG P
Sbjct:   64 VCRHWLRALCMKGDNCEFLHQYDMSKMPECRWGMECQVPECPFRHVPDEERVECAFYKQGFCSHGSSCRYRHIKLAREECPETADFTLQSKVADEENVKRRKAQPVNEFF--------------------------------------KIAICKHWEKMGSCPFGDECHFAHGDTELRPFPKGEKEEKEAQAGRQGGYHQVPLGGALFSNGERPSGGALLGPPLP-DDGKRVKYFLVQSASYLNLAHSVHYKCWAVPPDVLQPIKTASETSDEVFLFFTVGSSRHYQGVARLVTGATATIDLAAGEDLMAGIVPYEADGKSAWSGAFGIEWLRICECPWERLAQFENKLVAVPEWYDIDPNLFVVIVFMLILTFCMVLIDYSPNGHELDVETGHALMRLLYNQPQIKLHYRSVEDEPKLPGGAEELATRRREAAESLLGTPGGAPGFERTAPAWKVTQ-----------------------------------------------PGFVFTCTSETIDECFGRLLFGLANDHEAVAQQHVKPGTPLFLLNLSDQHLLGIFEAVSPAIVNMMPGAFCHGPNMPSPFPVQTRFAVMLNAPALPTSDPQIKKVIGDNGMNVGPLSLQVTQQLADVFAERSGAAFPPSGPPMGPGGP 630          
BLAST of mRNA_P-littoralis_Contig1294.1.1 vs. uniprot
Match: M4BLQ1_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BLQ1_HYAAE)

HSP 1 Score: 231 bits (588), Expect = 9.550e-61
Identity = 172/619 (27.79%), Postives = 256/619 (41.36%), Query Frame = 1
Query:    1 VCRHWLRGLCMIGDSCGYLHKMDRNRMPICRWRTDCQVEGCAFRHEEEQEAPECAMYQQGFCRQGPTCRFRHVKRAREDCPEVADFSLVNPTSFPSNSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDHAMGGMRSTKNQMCKYWANGGKCPWAGGCNYAHGEEELR--------------------RGGGFGSRFEPRKDPLTDPEIEAIVPVKEGEKARFFVLRSLNHDNLAVSAVQKKWYARRYNVLPFNQAFEGVGRVFFFFTVNYSSNFQGCA----------------EMTSAVPPMGPHPKEEQIAEFSVKWLRLCELPFSIADQVTNSLQNNLPVSRASHGMEVPYDAGRKLCKLMWAQPEVDLSPKVVKHAAEAPFTGVLVARTGPRGGNSGGPPGMMEPPHKIARVAGPPIGGGDXXXXXXXXXXSLQLPQQXXXXXXXXXXXXQTQHFDGPPGFLFEIESQHFDECVGKLLFGLPARLPPQAQDTIQPGNPMFLWDPGNGLVLGIFRAVS-CLSELIDRTAWALPGMETPLPWQVRVAVDLKAPPIKAGEPVLREVFRGGIVEPGALDPRQADVLASTMAGRLRPPPPG--VGPGLP 1740
            VCRHWLR LCM GD+C +LH+ D ++MP CRW  +CQV  C FRH  ++E  ECA Y+QGFC  G +CR+RH+K ARE+CP+ ADF+L +  +   N                                                   K  +CK+W   G CP+   C++AHG++ELR                      G  G  F+  +         A +P  +G++ ++F+L+S ++ NLA +    +W    + +     A E    VF FF V  S ++QG A                ++ +++ P     +      F ++WLR+CE P+    Q  N     L VS   +G E+  D G  L +L+  QPE+ L  + V+   + P                    G  E      R A   + G            + ++ +                     PGF+F   +Q  DEC G++LFGL       AQ  + PG P+FL +  +  +LG+F AVS  +  +I       P M +P P Q R  V L AP +   +P ++E       + G L       LA   A R   P  G  +GPG P
Sbjct:   62 VCRHWLRALCMKGDNCEFLHQYDMSKMPECRWGMECQVPECPFRHVPDEERVECAFYKQGFCSHGSSCRYRHIKLAREECPDTADFALQSKVADEENVKRRKAQPVNEFF--------------------------------------KIAICKHWEKMGSCPFGDECHFAHGDKELRPFPKGEKEEMEARAARYSGGHHGPSGPAFQGGERIQRPASTGAKLP-DDGKQVKYFLLQSASYLNLAHAVHHGQWTVPAHVLQSIKTASETSEDVFLFFAVGSSKHYQGMARLVNGALANMEISAGEDLLTSIVPYEADGRSTWSGAFGIEWLRICECPWERLAQFENK---QLAVSECPNGQELDADTGHALVRLLSNQPEIKLHYRSVEDEPKLP--------------------GGAEELATRRREAAESLFGASSVPGFGGPGPAWKVTK---------------------PGFVFTCTTQTIDECFGRMLFGLATDKEELAQQHVTPGTPLFLLNLSDQHLLGVFEAVSPAIVNMIPSAFCHGPNMPSPFPVQARFVVMLNAPALPVSDPQIQEAVGDKGFDVGPLSLCVTQQLAGVFAARSGAPLNGAPMGPGGP 597          
BLAST of mRNA_P-littoralis_Contig1294.1.1 vs. uniprot
Match: F0W8E6_9STRA (Uncharacterized protein AlNc14C34G3076 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W8E6_9STRA)

HSP 1 Score: 229 bits (585), Expect = 3.410e-60
Identity = 171/607 (28.17%), Postives = 247/607 (40.69%), Query Frame = 1
Query:    1 VCRHWLRGLCMIGDSCGYLHKMDRNRMPICRWRTDCQVEGCAFRHEEEQEAPECAMYQQGFCRQGPTCRFRHVKRAREDCPEVADFSLVNPTSFPSNSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDHAMGGMRSTKNQMCKYWANGGKCPWAGGCNYAHGEEELR-------RGGGFGSRFEPRKDPLTDPEIEAIVPVKEGE--------KARFFVLRSLNHDNLAVSAVQKKWYARRYNVLPFNQAFEGVGRVFFFFTVNYSSNFQGCAEMT---------------SAVPPMGPHPKEEQIAEFSVKWLRLCELPFSIADQVTNSLQNNLPVSRASHGMEVPYDAGRKLCKLMWAQPEVDLSPKVVKHAAEAPFTGVLVARTGPRGGNSGGPPGMMEPPHKIARVAGPPIGGGDXXXXXXXXXXSLQLPQQXXXXXXXXXXXXQTQHFD-GPPGFLFEIESQHFDECVGKLLFGLPARLPPQAQDTIQPGNPMFLWDPGNGLVLGIFRAVS-CLSELIDRTAWALPGMETPLPWQVRVAVDLKAPPIKAGEPVLREVF--RGGIVEPGALDPRQ--ADVLASTMAGRLRPP 1713
            VCRHWLRGLCM GDSC +LH+ D ++MP CRW  +CQV  C FRH  +++  ECA Y+QGFC  GP CR+RH+K ARE+CPE ADF+L +  +   N                                                   K  +CK+W   G CP+   C++AHG++ELR       R    G +     D     E    +P +E +           +F+L S ++ N+A S    +W      +    +       VF F TV  S +FQG   +T               S + P     +      F V+WLR+CE P+   + + +     L V  A   + +  D GRK   ++++QP++ L  K V+                                          IGG                 ++             T H+    PGF+F   +   DEC G+LLFGL       A+  + PG P+FL +  +  +LGIF AVS  +  ++       P   +P P Q R  V L APPI   EP+++++F  RG  + P  L   Q  AD+ A      L PP
Sbjct:   63 VCRHWLRGLCMKGDSCEFLHQYDMSKMPECRWGMECQVPECPFRHVPDEDRMECAFYRQGFCSHGPNCRYRHIKLAREECPETADFALQSKVAEEENVKRRKTQPVNEFY--------------------------------------KIAICKHWEKLGSCPFGDECHFAHGDQELRPFPRQNERAESVGFQKPGASDTFPINEPSHPIPFQEPQPRLPDADRNCAYFILHSFSYHNIAHSVHYHQWTLTDSPLQQLREIAGSYDVVFLFITVTSSRHFQGVVRVTKDIIQRLPSCGEDLASGIVPYQTDKRSSWEGVFPVEWLRICECPWEFFESIASKY---LFVPNAPKLIPLETDQGRKCMHILFSQPQIQLHYKSVEDEQTL-------------------------------------IGGAFELAVRR---------REAAASVYSNPNTLSTFHWRVSAPGFVFACNNLTIDECFGRLLFGLGKDHEAIAKQHVVPGTPLFLLNMSDRHLLGIFEAVSPSVVNMVPNAFSHSPHQMSPFPVQTRFVVQLNAPPISTTEPMIKQLFGDRGVRIGPITLPVTQKLADIFAKRCGVVLAPP 582          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1294.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FPL2_ECTSI5.780e-28571.27Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D0NFE9_PHYIT3.230e-7029.98Uncharacterized protein n=12 Tax=Phytophthora TaxI... [more]
H3GWX4_PHYRM1.950e-6730.21Uncharacterized protein n=2 Tax=Phytophthora ramor... [more]
A0A0P1AE75_PLAHL3.400e-6529.05Cleavage and polyadenylation specificity factor cp... [more]
A0A6A3FD54_9STRA1.940e-6429.06Uncharacterized protein n=2 Tax=Phytophthora TaxID... [more]
A0A8K1FJ65_PYTOL9.310e-6429.35Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A5D6XNC2_9STRA3.100e-6230.82Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A3M6VWE6_9STRA9.550e-6228.48Uncharacterized protein n=1 Tax=Peronospora effusa... [more]
M4BLQ1_HYAAE9.550e-6127.79Uncharacterized protein n=1 Tax=Hyaloperonospora a... [more]
F0W8E6_9STRA3.410e-6028.17Uncharacterized protein AlNc14C34G3076 n=1 Tax=Alb... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1294contigP-littoralis_Contig1294:2080..10330 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FPL2
PFAMsDev_Cell_Death,YTH,zf-CCCH,zf-CCCH_2
Model size2742
Max annot lvl2759|Eukaryota
KEGG koko:K14404
KEGG Pathwayko03015,ko05164,map03015,map05164
Hectar predicted targeting categoryother localisation
GOsGO:0002682,GO:0002684,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004540,GO:0005488,GO:0005515,GO:0005516,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005847,GO:0005849,GO:0006139,GO:0006378,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009966,GO:0009987,GO:0010363,GO:0010467,GO:0010468,GO:0010646,GO:0010941,GO:0010942,GO:0016070,GO:0016071,GO:0016787,GO:0016788,GO:0019219,GO:0019222,GO:0023051,GO:0031123,GO:0031124,GO:0031323,GO:0031347,GO:0031349,GO:0031440,GO:0031974,GO:0031981,GO:0032991,GO:0034052,GO:0034641,GO:0043067,GO:0043068,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043631,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044451,GO:0044464,GO:0045088,GO:0045089,GO:0046483,GO:0048518,GO:0048522,GO:0048583,GO:0048584,GO:0050684,GO:0050776,GO:0050778,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0070013,GO:0071704,GO:0080090,GO:0080134,GO:0080135,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0140098,GO:1900363,GO:1901360,GO:1901363,GO:1903311,GO:2000031,GO:2001023,GO:2001038
Exons10
Evalue6.74e-281
EggNOG OGsCOG5084@1|root,KOG1902@1|root,KOG1040@2759|Eukaryota,KOG1902@2759|Eukaryota
Ec32 ortholog descriptionDevelopment/cell death domain
Ec32 orthologEc-12_001020.1
DescriptionN6-methyladenosine-containing RNA binding
Cds size1848
COG categoryL
BRITEko00000,ko00001,ko03019,ko03021
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1294.1.1prot_P-littoralis_Contig1294.1.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig1294 2110..9466 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789578.4295595-UTR-P-littoralis_Contig1294:2079..21091680789578.4295595-UTR-P-littoralis_Contig1294:2079..2109Pylaiella littoralis U1_48UTRP-littoralis_Contig1294 2080..2109 +
1680789578.5475612-UTR-P-littoralis_Contig1294:9466..103301680789578.5475612-UTR-P-littoralis_Contig1294:9466..10330Pylaiella littoralis U1_48UTRP-littoralis_Contig1294 9467..10330 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789578.4399323-CDS-P-littoralis_Contig1294:2109..21711680789578.4399323-CDS-P-littoralis_Contig1294:2109..2171Pylaiella littoralis U1_48CDSP-littoralis_Contig1294 2110..2171 +
1680789578.44827-CDS-P-littoralis_Contig1294:3011..31311680789578.44827-CDS-P-littoralis_Contig1294:3011..3131Pylaiella littoralis U1_48CDSP-littoralis_Contig1294 3012..3131 +
1680789578.4567397-CDS-P-littoralis_Contig1294:3958..42681680789578.4567397-CDS-P-littoralis_Contig1294:3958..4268Pylaiella littoralis U1_48CDSP-littoralis_Contig1294 3959..4268 +
1680789578.4668808-CDS-P-littoralis_Contig1294:5182..53351680789578.4668808-CDS-P-littoralis_Contig1294:5182..5335Pylaiella littoralis U1_48CDSP-littoralis_Contig1294 5183..5335 +
1680789578.4811237-CDS-P-littoralis_Contig1294:6281..64041680789578.4811237-CDS-P-littoralis_Contig1294:6281..6404Pylaiella littoralis U1_48CDSP-littoralis_Contig1294 6282..6404 +
1680789578.4906955-CDS-P-littoralis_Contig1294:6732..68551680789578.4906955-CDS-P-littoralis_Contig1294:6732..6855Pylaiella littoralis U1_48CDSP-littoralis_Contig1294 6733..6855 +
1680789578.5068717-CDS-P-littoralis_Contig1294:7266..73471680789578.5068717-CDS-P-littoralis_Contig1294:7266..7347Pylaiella littoralis U1_48CDSP-littoralis_Contig1294 7267..7347 +
1680789578.5154862-CDS-P-littoralis_Contig1294:7579..79181680789578.5154862-CDS-P-littoralis_Contig1294:7579..7918Pylaiella littoralis U1_48CDSP-littoralis_Contig1294 7580..7918 +
1680789578.525744-CDS-P-littoralis_Contig1294:8283..84991680789578.525744-CDS-P-littoralis_Contig1294:8283..8499Pylaiella littoralis U1_48CDSP-littoralis_Contig1294 8284..8499 +
1680789578.5363464-CDS-P-littoralis_Contig1294:9145..94661680789578.5363464-CDS-P-littoralis_Contig1294:9145..9466Pylaiella littoralis U1_48CDSP-littoralis_Contig1294 9146..9466 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig1294.1.1

>prot_P-littoralis_Contig1294.1.1 ID=prot_P-littoralis_Contig1294.1.1|Name=mRNA_P-littoralis_Contig1294.1.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=616bp
MIGDSCGYLHKMDRNRMPICRWRTDCQVEGCAFRHEEEQEAPECAMYQQG
FCRQGPTCRFRHVKRAREDCPEVADFSLVNPTSFPSNSGGGSRAGGFSSS
FGGGSFGGGGGGGGGGGGGAAERGGGGGDHAMGGMRSTKNQMCKYWANGG
KCPWAGGCNYAHGEEELRRGGGFGSRFEPRKDPLTDPEIEAIVPVKEGEK
ARFFVLRSLNHDNLAVSAVQKKWYARRYNVLPFNQAFEGVGRVFFFFTVN
YSSNFQGCAEMTSAVPPMGPHPKEEQIAEFSVKWLRLCELPFSIADQVTN
SLQNNLPVSRASHGMEVPYDAGRKLCKLMWAQPEVDLSPKVVKHAAEAPF
TGVLVARTGPRGGNSGGPPGMMEPPHKIARVAGPPIGGGDGGGGVGVGVG
SLQLPQQQQPQQQQPQQQMQTQHFDGPPGFLFEIESQHFDECVGKLLFGL
PARLPPQAQDTIQPGNPMFLWDPGNGLVLGIFRAVSCLSELIDRTAWALP
GMETPLPWQVRVAVDLKAPPIKAGEPVLREVFRGGIVEPGALDPRQADVL
ASTMAGRLRPPPPGVGPGLPPPVLGGDMGPGFNGPGVGSIGSGPRGRGRR
RGRGGVSRGRRPGKF*
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mRNA from alignment at P-littoralis_Contig1294:2080..10330+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig1294.1.1 ID=mRNA_P-littoralis_Contig1294.1.1|Name=mRNA_P-littoralis_Contig1294.1.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=8251bp|location=Sequence derived from alignment at P-littoralis_Contig1294:2080..10330+ (Pylaiella littoralis U1_48)
GTATGCCGGCATTGGCTACGAGGGCTATGCATGATCGGCGACAGCTGCGG CTACTTGCACAAGATGGATCGAAATAGGATGCCCATTTGCAGGTAAATGT CTTTTTTGTGTACTTTACAATGAAGATGAGGAAGAAGAGCTATCAGACGA TACGCGTAGCCCTTCCTTGGCCGCTCTCTATCTTTGCTCTTGTTCTTTTG AAACGAACAGAATGTCGCGAGACCTGCGACAGGCGCAAAAGTTATTTTAT TATTTTTTCAAGCCGATGTTTTCACAGCCCGTGCGATGAGTTCCCATGGT ATATGGGTAATTTTCGTTGAGCACAACCAGCTTTGGCGTGTTACTGCTGA CCCAGCTGGATTTTTGCAATGTACAACGCATGTTTTTTTTGTGTTCGGCT GGTCACACTGAACACTCATCGTGAGAATCTCAACAATACATCCTCCCGAG GCTCTCCTTTGGTAGGCGGCAATACCCTTCTTTGATTCTTTTGATGTTCA TCTGGTTATCACAAAGGAGATCAACGCCAACCACGGGCCACCCATGCCAG GCAGGGCTCAGACGGGTCTGACATGTTTCCTGTCCGTCATGCCAAGAGCA CTGTAGAATCGATAGCCTCACTGAGCACAGCAGCCACCATTTTCAGGGTC CGGGGCAGTTGGACGTGCTAAATATGACACGAAGTATCAATCACAAGCCG TTCGTTTTGCACGATTTTACAAAGTAATCGACGACGACGCACGAACAGGC AGGCACGGCGAGAGACCGTGGCACAACGCGCACGCGGTGGAGCATTGTCT CGTCACGGCTCTTGGTAAACACACCCGCAGCGTTTGCGGTTTTCTCAACA AGCTGGCTCCCAATTTAACCGTCCCCCTTCTGACCCGATCCCCTTCAAAA TTTTTCGTTGGACGCAACGCGGCGAAAAATAGGTGGAGAACGGACTGCCA GGTGGAAGGATGCGCGTTCCGGCACGAGGAGGAGCAGGAGGCCCCCGAGT GTGCCATGTACCAGCAGGGCTTCTGTCGGCAAGGACCTACGTGCAGGTTT AGGTGAGACATGAGTGCCATGCCGACATTCTACGCCGTGCCGCCGTGAAT TTTTTCCTGTCTGGGTCGAAGTTGTTGTTTTTTTGGTGACGTGCCATTAT TTTGTTTGCACATGTACCGCAATGCCATCTCGAGATCGTCTTTTGAGTGT CATGCCCGCGCACCCATGCATTCTACGGATGGGATTTTGTCTTGGTGTAC ACGCGGTGTTCTGTATCGTGCTGCAAGTATCATGCGAAGAATGAAGATGG GGAAAAAAGTACCTGCGCACGAGGGGGCGTCGAGAGTGGTGTCTACAATA GTTGGGATGACAACGCACACATGTACGCACAAGCTCGTTGGTCCAGTGAA GTACTGCTGTAAAGTAGAGCGGATACGATTATTTTTGAACGGGGCCATCG TTTTTTTCTACTGTAGAGATTGATTGTTTGCTGTGTCAATGCCCCATCTA GATAGTGCTTCCGCAGGCTTTGTGAGGGTTGTCTCAAATGTCTAAAGTGA CTGATGAGCCCCGTATTTCCCTGCCATGCCATTCACTTCGTTCGGCCCAA TTTCACGCGTCAGACATGGATCTAACGAGCAGTCCCACACCGAAGGTTAA AGCTGCTGCCATTGTGTGCACTGTCGTGTTGTGACTCTTGCACTGTCCTG CCGGTATGCAAGCTGTATGCGGTAGTAACTTGAATACCCAACACTAGGTA CCTCACGTACGCACACAGAAATACACACACCCCGCCCGCTTCTGGTTTGA CGGTCCTTGCTACGTGAGAAAATGAAATTAACCTGTCGCCCACTTGGCGC GCAATTTCCACCCAATGAATTCAATCCAGGCACGTGAAAAGAGCGAGAGA GGACTGCCCGGAGGTGGCCGACTTCTCTCTAGTAAATCCCACGAGCTTCC CGTCCAACAGCGGCGGCGGCAGCAGGGCGGGGGGCTTTAGCTCTAGCTTT GGCGGTGGGAGCTTCGGTGGTGGTGGTGGTGGCGGCGGCGGCGGCGGCGG AGGGGCAGCGGAGAGGGGAGGGGGCGGGGGTGACCACGCCATGGGCGGCA TGAGAAGCACCAAGAATCAGATGTGCAAATATTGGGCGAACGGGGGCAAG TGTCCTTGGGCGGGTGGGTGCAATTATGCGCACGGAGAGGTGTGTTGTGT TTGCAGTGTGTGCAGTGTGTGCAGTGTGTGCAGTGTGTGCAGTGTGTGCG TGTGTGCAGTGCAATGGTTTATACGGTATGGGGGGGGCGTATGTCATTGT GATCATTAATCATGTATCCTATTCGAGACAGACAAGGGGGAGTGGGACCC ATTTTTTGGCTTGCCTTTTTGTCATTTGACTATTTTTTTATCGCCAAATC GTCCCTCGGTCGAGATGAAGGGGGGCCCGTTGGTTCCTTCTTCTGTTTCT TTTGCTGGGAACGGGTGTTGGTTCACCGTAAGGCAAGACCGCTCGCGTTC CGTCAAGGCCGAAACAAAGCGCGACGATTGTCGCAGACCAGACAGACAGC AGGGGAGGTGGTAGCTGAGGAAAGAGCCCTTTGTCCTTGTGTTGCGCGGG TGTGGGGGATTACTTGGTTGTTGCTGGACGACAGAAACCGGTTACAGGGG AAAGGGTGGGGGGGGGGCTCTGCATTGTTTGCAGTTTTTTTGTGGGCCAA GGTGCGGTGAGTAATGGCGGGCCGCTTGTTTCGGTTAGCACTTTTGACCC CCTCTTCGCCGTGATTTTTGGAAGAGCAACCGGAGTTGCTATCGTTTTAA AGACTTCGAGGCTGTCTGTACCGAGTTGTACTTCCACTAACCAAGAAAAA AAAACAAGAACGCAAACCAGTGTTTTCCGTTGTTTTCGTATCCCCTCTGC TGTTGTTGCATCGATGAGCGCCGTGTCCCTTGACTGATCGCTGCCAGAGT GGTCCCTTAAGAAATACAAGTATGTTTTCGTGATTCGGAGGGTTGTCAGA CGGCTTGCTACGTACAAGCTGCGGGCCCTTACTGTCTGTCTGTCTTGTCT GTCTCAACGACGTTGTGGTTTGCGAATGGCTTGATCGATTCGCACCTGCG CAGGAGGAGCTTCGAAGAGGTGGCGGGTTCGGGTCTCGATTCGAACCGCG TAAGGATCCCCTGACGGATCCCGAGATCGAAGCGATCGTACCAGTGAAGG AGGGAGAAAAGGCGCGATTCTTCGTGCTGAGGAGCCTCAACCACGACAAT CTGGCGGTGAGCACGTGTTTTTTTTCACTCATTTGATAATAGTGTAGGAT GCAGATCACCCTTTGATGGGACTGACGCGCCGAACAGGAGGCGTAATGCA CGGCTCTTTGCGCTTGGTGCTGTCGTTTACGTGCCGACCTGGTCGGGCGA AGACCCGGCGTGCTCCGTCGCGGCTTTTTGAAGATATTGTTGTTGATTCT CACAAGAGCTGATCGCCAAAATCTGTGATACCCCGTGATAATAAAGCAGA CACCGCCAAGATTTGGTGAAAATAACGAACTTTATGGATGCGAGGCGTGT ATGGTGTAGCGACTACGGCACGCATGATCGTGAGTACACAGGCCCCTTGA CCCGAACCTAACCCGCTTGGCTTCTTTTGTTGAAACCCGTGTCCGGCATG CCCCGTTGCGGCTTGGTGGGGATGCTACAGCAGTAGTGACGGCCTTTACG GCGTGGTTGATTATGCGTATGAGAGTGTTTCTCCCTCTATCCATCCTTCC CTCGGAAGAAGTTGGTAGGTGCAGGAGATGATTTCGACGAGGCAAGAAGA CATACTTCGAAGTATGATATATGACCGTGTGGGTTGATTGGATTGGGGGC ACAGGGACTCAGATAAATTGTTGACAGCTGCTCCGGGAGAGAGAGGGGAT GACCCGACTCATACATATCACTGCTGTACGCTGTACGAGTAGGGGAGGGC AGGTGAAAAGGTAGTTGTTGGAAAAAGATACCAGTACCACAACACAAAAA GGAATGCAAGAACGTTTGACGTGTGTATAATATAACAAGGAACGTGAACC TTGTCGCTTCTTACCCGACAAGCATCGTCGATAGTTAAAGAACTACCGCA GTAGGCAAGAAACCAGATAACCCCCCCCCGTCCCCTcCCCCCCGCCCGTC GCCCCCCTGCGTTCCCCGACCGATCTACTCAAACTACGCGTTGTGTTGTC AGGTTAGTGCTGTGCAGAAGAAATGGTACGCCCGACGGTATAACGTCTTG CCCTTCAACCAGGCGTTCGAGGGTGTCGGGAGGGTGTTCTTTTTCTTCAC GGTCAACTACAGCAGCAATTTCCAGGTGTGTGCGTGTGTGTGCGTGTTCG TTTGGAAGACAGCTTCCTTGTCCGTTTACCTTCTTCCGTGTCCGCAACTG CAGTAGCAGATCCTTCGTAATCTATCTATCTGTGTCTCTGTCCGCCTCTC TTTCTATGTTTTCATTCATCGATCTACAACGACCAGTCTTTCTCTTCCCG CTGTTTATGTAACTACGAAACTACCTCGTTTCTCGTCCACAGCAGCTCCG CAGCAGTAGATAATAATGCAGAATTTTTGTTGACTTTCTGTCGGCCGTCG ATTTTCCTTCTCTCTTTCTGTTTTCTCTGTTTCGTTTTTGTTGGCGCGGT CAGGGTTGCGCCGAGATGACGTCGGCGGTTCCCCCGATGGGACCCCACCC GAAGGAGGAGCAGATTGCCGAATTCTCCGTCAAGTGGCTGAGACTTTGCG AGTTGCCCTTCTCCATCGCCGACCAGGTTAGTGACTTTCAACGTAAGCAA TGTGCCACACGATTCGCTAGAGAGAGCTCGCGGGGATCGCTTTTTGTTTC GCGGGAGTGAAGTGCTTTGGATATAGATAGGTACGATATCATATGTTCGC ACAGAATCTGGATGCGATCAGCATCATTAGAGAGATCCGCTTCGGCCTTT GGGGGCAGGGGCTCCTCTCTTTTGGGCGACGTGTTTTGTTTCTCCGCCCT GCTTGGATCGATAACATGTCACCGCGTCGGTCAACACCAGACAGCAAGAC ACTACTGGTGAATGGACCCACCAATACACGCATTTGACAACACCATCCTC CATCGTGACTTCTGGCGATACATGCAAGTGTCTCTACCTCACGACCCTCC CCACCCGCTGTTGTTGTCTCTGCCGTTGGCCGATCAGGTCACGAATTCTT TGCAAAACAACCTGCCGGTTTCTCGCGCGAGCCACGGCATGGAAGTGCCC TACGACGCGGGGAGGAAGGTAGGATGAACGCACGAAATTTTCGAGTCCCA TGCACTGTCATCCCCTCTCCCCCATCGCCCCCTCCAGCGTCTCGAAGGGA TGGGATTGGATGTCGGGCGAATGGTGAATGCCGAAGCGATGCGTATCTAG TGATTTGAAATTGAACTACCCCCGGCCACCCCGTGGTTCCTCCGTTTTAT CCCTCGCGTGCGGGCGTTCAAATTGCAAACACCATAAACTATGCTTGCAG CTCTGTAAGCTGATGTGGGCCCAGCCGGAGGTCGATCTCTCCCCAAAAGT CGTCAAACATGCGGCCGAGGCGCCGTTTACCGGGGTGCTGGTTGCCCGCA CCGGCCCCAGGGGAGGGAATTCCGGCGGACCTCCTGGGATGATGGAGCCC CCTCACAAGATCGCACGAGTAGCGGGCCCCCCGATAGGCGGTGGGGATGG GGGTGGGGGGGTAGGGGTAGGGGTGGGCTCGCTGCAGCTGCCGCAACAGC AGCAGCCGCAGCAGCAGCAGCCGCAGCAGCAGATGCAAACTCAGCACTTT GACGGCCCCCCCGGATTTCTGTTTGAGATCGAGTCTCAGGTGCGCAAAGG AGTAAACGCAGAAATTGATAGAGAAGACTTGCCTCGCTTTTGCCGCAAGT GTTGTCGAGGGAAAAAGGCCCCCCTACAATGCAGCATCGAACTTTTTACG ACAACCCGTTCTCGATCATAAAATATACAAGCACGAGGTTTTCGGGGCAA ACGTAACAACAACCGCCTGGAACAAAACGCCGAACAACGTTTTTCTCTCT ACTCTCTCCTCCACTCCTGAGGGGGGTGGCGCAGGTTCTGCGGGCACCAC CACTACGACGCACAAGCATGGAGTCGGCGTTTTTAATCCAAACCGCCATA CTCCACGTTTGCTTTCCCTCCTTAATAATCTCGGCATTTTTCTCGCTGTC ACAGCACTTCGATGAGTGTGTCGGAAAGCTCCTCTTCGGCCTTCCCGCTC GTCTACCCCCGCAAGCGCAAGACACCATTCAGCCTGGAAACCCCATGTTC TTGTGGGACCCGGGAAACGGTCTGGTTCTAGGAATTTTCCGTGCCGTTTC TTGCCTGTCGGAGCTGATCGACAGGACGGCGTGGGCGCTGCCGGGCATGG AGACGCCTCTCCCATGGCAGGTTTGTTTCTTGGCTTGCTCTCTCTGTTTG TACCGCTTGTTTGTTTGGTTTGTTTGTTTATTTGCTTGTTTGTTTGTTTT GGTTCGTTTGGTTTGTTTGTTTGTTTGTTTGTTTTATTTTTGTTTTTGTT TTTGTTTTGGTTTGTTTTTGTTTGTTTGTTTGTCTGCTTCTTTCTTTCTT TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTGAATAATGT ACTTTTTCAAATATATTGAATTTTTGTGCTGGTTCTCCTGCATCGTTTTC GACCACAGAGGTAATGATGCTGAGAAAGAGGGGATATATGATCGTGAGAT GGAGAAGAGATGCGCGGTCGCGCCAGTGCACGTCTGGCTAAATGCGCCTT AGAAACCTCCGTCTTTGTGACGGAATCTTCCCCTTCAAAACCACGTATCC TCTGTCTCTCTTCAACGTTTTCATGCCTGATCATCTCCAGGCACATTCCC CATCCCCATACACTTCAGAAATCATGAGTCTTCACAACTCACCTTTGTGT GCATCACGCACACACCTCCCCCTCCTCCGCGCGCGCCCCCCCCCCCCCCT CCCGTATCCGCATTGAACCCAAAACCTACTCGCGATTGGTTACTCATATA TATATATTTTCCCCAGGTTCGAGTTGCGGTGGACCTAAAGGCTCCCCCGA TCAAGGCCGGCGAGCCGGTCCTCCGAGAAGTTTTCCGAGGAGGCATAGTC GAACCGGGGGCGTTAGATCCGCGTCAGGCAGATGTGTTGGCGTCAACCAT GGCGGGCCGCTTGCGGCCACCGCCGCCCGGAGTGGGGCCAGGGCTACCGC CACCAGTATTAGGAGGGGACATGGGGCCGGGTTTCAACGGGCCTGGTGTA GGCAGTATTGGTTCTGGACCGAGGGGGAGGGGGCGCAGGCGTGGTAGAGG AGGGGTTTCTAGAGGTCGCAGGCCAGGGAAATTCTAGAGAGACAAGACAT CAGTGCCCTGATTGGTCGACCTTGGTGCCGCTCTATTCTACTGTATGTAT ATACGTCGGGTGTTGGGAGGCGGTTGAAGGACGGGTCGGATGCTCCAGCG TGTTGGGTTGGTGGGGATATGGTCTGCGTGTGGCACGCACAATGCAACCC CGGTGCGTTCGCAGGTCTATGTACTTATGCCACCATTTTGGCCAGTTGCG TCGTAAAGGCGCGCGTTGTGGGGGTGTCACGGACCGTGAAAGTTCTGTCT GCCTTTCAGTCCCCGAAGCCCCCGCGTCGTTTGATGTGCTACATACCTCA AGTAGCATTTAGTAGCTCGTTTTCTTTCAGAAATGGTATGGGATACGGGA CCGGTTGTGGGTGCTGTAATGGTCGAGGATTATCTGTCGCGCGCGGACTC ATTTTGGCTTAGCTGTACAAATATCCGTCGCGACGATTTTTTGCGCGTGC ATTTTAGCCTTGTGTTGTGACACCCCTTGAGAGGGATGCTTCCCTTTCAT TTTTTCAGAGGCTGTAGGAACAGATTGCTGTGCTCCACGTCGCGCTCGGT GTTATGTTATACTTTTGAGTACATTGGAATGCCGTGGTGTGTTTTCGATC GATGTCAAAAATAAAAAATCACCCCATTTCTTGCTACTACTGCCGGTAGT AGTTGAAAAATATTCGAGGAACTGATTGACTTAAGGGTTACGGTTAGGAT CAGACCGATCCGTTTGCTCGTCAAAGTGATGGATCAGTAAGCGTGGACAA GCCAACCAGTGCCCAGTGTCCCTTGACTGTGCGTGTGTGCCCCCAACCCT GCAAACTCACATGCCCCTATCATGATGTGCACTGAGTAGCACAGCACCGC A
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Coding sequence (CDS) from alignment at P-littoralis_Contig1294:2080..10330+

>mRNA_P-littoralis_Contig1294.1.1 ID=mRNA_P-littoralis_Contig1294.1.1|Name=mRNA_P-littoralis_Contig1294.1.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1848bp|location=Sequence derived from alignment at P-littoralis_Contig1294:2080..10330+ (Pylaiella littoralis U1_48)
ATGATCGGCGACAGCTGCGGCTACTTGCACAAGATGGATCGAAATAGGAT
GCCCATTTGCAGGTGGAGAACGGACTGCCAGGTGGAAGGATGCGCGTTCC
GGCACGAGGAGGAGCAGGAGGCCCCCGAGTGTGCCATGTACCAGCAGGGC
TTCTGTCGGCAAGGACCTACGTGCAGGTTTAGGCACGTGAAAAGAGCGAG
AGAGGACTGCCCGGAGGTGGCCGACTTCTCTCTAGTAAATCCCACGAGCT
TCCCGTCCAACAGCGGCGGCGGCAGCAGGGCGGGGGGCTTTAGCTCTAGC
TTTGGCGGTGGGAGCTTCGGTGGTGGTGGTGGTGGCGGCGGCGGCGGCGG
CGGAGGGGCAGCGGAGAGGGGAGGGGGCGGGGGTGACCACGCCATGGGCG
GCATGAGAAGCACCAAGAATCAGATGTGCAAATATTGGGCGAACGGGGGC
AAGTGTCCTTGGGCGGGTGGGTGCAATTATGCGCACGGAGAGGAGGAGCT
TCGAAGAGGTGGCGGGTTCGGGTCTCGATTCGAACCGCGTAAGGATCCCC
TGACGGATCCCGAGATCGAAGCGATCGTACCAGTGAAGGAGGGAGAAAAG
GCGCGATTCTTCGTGCTGAGGAGCCTCAACCACGACAATCTGGCGGTTAG
TGCTGTGCAGAAGAAATGGTACGCCCGACGGTATAACGTCTTGCCCTTCA
ACCAGGCGTTCGAGGGTGTCGGGAGGGTGTTCTTTTTCTTCACGGTCAAC
TACAGCAGCAATTTCCAGGGTTGCGCCGAGATGACGTCGGCGGTTCCCCC
GATGGGACCCCACCCGAAGGAGGAGCAGATTGCCGAATTCTCCGTCAAGT
GGCTGAGACTTTGCGAGTTGCCCTTCTCCATCGCCGACCAGGTCACGAAT
TCTTTGCAAAACAACCTGCCGGTTTCTCGCGCGAGCCACGGCATGGAAGT
GCCCTACGACGCGGGGAGGAAGCTCTGTAAGCTGATGTGGGCCCAGCCGG
AGGTCGATCTCTCCCCAAAAGTCGTCAAACATGCGGCCGAGGCGCCGTTT
ACCGGGGTGCTGGTTGCCCGCACCGGCCCCAGGGGAGGGAATTCCGGCGG
ACCTCCTGGGATGATGGAGCCCCCTCACAAGATCGCACGAGTAGCGGGCC
CCCCGATAGGCGGTGGGGATGGGGGTGGGGGGGTAGGGGTAGGGGTGGGC
TCGCTGCAGCTGCCGCAACAGCAGCAGCCGCAGCAGCAGCAGCCGCAGCA
GCAGATGCAAACTCAGCACTTTGACGGCCCCCCCGGATTTCTGTTTGAGA
TCGAGTCTCAGCACTTCGATGAGTGTGTCGGAAAGCTCCTCTTCGGCCTT
CCCGCTCGTCTACCCCCGCAAGCGCAAGACACCATTCAGCCTGGAAACCC
CATGTTCTTGTGGGACCCGGGAAACGGTCTGGTTCTAGGAATTTTCCGTG
CCGTTTCTTGCCTGTCGGAGCTGATCGACAGGACGGCGTGGGCGCTGCCG
GGCATGGAGACGCCTCTCCCATGGCAGGTTCGAGTTGCGGTGGACCTAAA
GGCTCCCCCGATCAAGGCCGGCGAGCCGGTCCTCCGAGAAGTTTTCCGAG
GAGGCATAGTCGAACCGGGGGCGTTAGATCCGCGTCAGGCAGATGTGTTG
GCGTCAACCATGGCGGGCCGCTTGCGGCCACCGCCGCCCGGAGTGGGGCC
AGGGCTACCGCCACCAGTATTAGGAGGGGACATGGGGCCGGGTTTCAACG
GGCCTGGTGTAGGCAGTATTGGTTCTGGACCGAGGGGGAGGGGGCGCAGG
CGTGGTAGAGGAGGGGTTTCTAGAGGTCGCAGGCCAGGGAAATTCTAG
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