mRNA_P-littoralis_Contig1294.9.2 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig1294.9.2 vs. uniprot
Match: A0A6H5JAU4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAU4_9PHAE) HSP 1 Score: 265 bits (678), Expect = 3.730e-82 Identity = 125/216 (57.87%), Postives = 158/216 (73.15%), Query Frame = 2
Query: 167 LPHATSVLASLHILGRGNFFEDMTQMSHMSESTIQNSFHKFNKLFAREFYHSHVHLPTAGEDQEQVMKHYDHLGFTGAIGSTDVTHIKWAACPHSWEKLYTGKEGFATIAFQAIVDHTGRLLAATKGFAGSMNDKTIIRYDAAVTKIRKDPIYTEKVYTLFDKDGTPFQRKGNYSIVDNGYNKWAILIPPTKWPTTDMETRWSRALESVRKDVECF 814
+P VLA L IL RGN F D+ MS +S T +FH+F + FARE Y H+ LPT G+ Q++VM YD LGF+GA GSTDVTHI W CP++ + YTGKEG+ T+A+Q VDHT R+LA T GF GS NDK+IIRYD AVTKIR+DPIY+EK +T+++ DGTP+Q KG Y +VDNGY+KW LIPP+K+P + +S+ LESVRKDVECF
Sbjct: 153 IPVQLKVLACLQILARGNCFADIYHMSFISMQTAAATFHRFTRYFAREMYAEHIFLPT-GDYQKKVMTQYDRLGFSGATGSTDVTHIPWGMCPYNQARSYTGKEGYPTVAYQVTVDHTKRVLAVTPGFTGSTNDKSIIRYDTAVTKIREDPIYSEKEFTVYEADGTPYQLKGCYLLVDNGYHKWVTLIPPSKYPIDQNDLAFSKRLESVRKDVECF 367
BLAST of mRNA_P-littoralis_Contig1294.9.2 vs. uniprot
Match: A0A6H5KY50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY50_9PHAE) HSP 1 Score: 258 bits (659), Expect = 3.150e-80 Identity = 123/215 (57.21%), Postives = 157/215 (73.02%), Query Frame = 2
Query: 170 PHATSVLASLHILGRGNFFEDMTQMSHMSESTIQNSFHKFNKLFAREFYHSHVHLPTAGEDQEQVMKHYDHLGFTGAIGSTDVTHIKWAACPHSWEKLYTGKEGFATIAFQAIVDHTGRLLAATKGFAGSMNDKTIIRYDAAVTKIRKDPIYTEKVYTLFDKDGTPFQRKGNYSIVDNGYNKWAILIPPTKWPTTDMETRWSRALESVRKDVECF 814
PH T VLA L IL RGN F D+ MS +S T+ ++FH+F K FA E Y +V+LPT GED +VM+ YD +GF GA+GSTDVTHI W CP++ ++YTGKEG T+AFQ VDH+GR+LA T+GF G+ NDKTIIRYD AVT+IR DP+YTE+ Y L+ +DG F+ KG Y +VDNGY+KW LIPP+K P + +S+ LES RKDVEC+
Sbjct: 80 PH-TQVLACLQILSRGNVFADIYHMSFISFQTVASTFHRFCKYFAAELYDEYVYLPT-GEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECY 292
BLAST of mRNA_P-littoralis_Contig1294.9.2 vs. uniprot
Match: A0A6H5JPH7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPH7_9PHAE) HSP 1 Score: 256 bits (654), Expect = 2.150e-78 Identity = 121/216 (56.02%), Postives = 156/216 (72.22%), Query Frame = 2
Query: 167 LPHATSVLASLHILGRGNFFEDMTQMSHMSESTIQNSFHKFNKLFAREFYHSHVHLPTAGEDQEQVMKHYDHLGFTGAIGSTDVTHIKWAACPHSWEKLYTGKEGFATIAFQAIVDHTGRLLAATKGFAGSMNDKTIIRYDAAVTKIRKDPIYTEKVYTLFDKDGTPFQRKGNYSIVDNGYNKWAILIPPTKWPTTDMETRWSRALESVRKDVECF 814
+P VLA L IL RGN F D+ MS +S T+ ++FH+F K FA E Y +V+LPT GED +VM+ YD +GF GA+GSTDVTHI W CP++ ++YTGKEG T+AFQ VDH+GR+LA T+GF G+ NDKTIIRYD AVT+IR DP+YTE+ Y L+ +DG F+ KG Y +VDNGY+KW LIPP+K P + +S+ LES RKDVEC+
Sbjct: 169 VPVELKVLACLQILSRGNVFADIYHMSFISFQTVASTFHRFCKYFAAELYDEYVYLPT-GEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECY 383
BLAST of mRNA_P-littoralis_Contig1294.9.2 vs. uniprot
Match: A0A6H5JHI0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHI0_9PHAE) HSP 1 Score: 236 bits (601), Expect = 1.010e-71 Identity = 114/216 (52.78%), Postives = 149/216 (68.98%), Query Frame = 2
Query: 170 PHATSVLASLHILGRGNFFEDMTQMSHMSESTIQNSFHKFNKLFAREFYHSHVHLPTAGEDQ-EQVMKHYDHLGFTGAIGSTDVTHIKWAACPHSWEKLYTGKEGFATIAFQAIVDHTGRLLAATKGFAGSMNDKTIIRYDAAVTKIRKDPIYTEKVYTLFDKDGTPFQRKGNYSIVDNGYNKWAILIPPTKWPTTDMETRWSRALESVRKDVECF 814
P VLA L ILGRGN F + Q+S MS T+Q FHKF K FARE Y H++LP+ + + VMK YD LGF+GA+GS DVTHI W+ CP++ + YTGKEG T+ +Q V+H GR +A T+GF S NDKT + +DA V KIR D YTEK + ++++DGT KG Y +VDNGY+KW IL+ PTK+P ++ + +S+ LESVRKDVECF
Sbjct: 94 PVEHKVLAWLTILGRGNCFASIYQVSWMSAKTVQTMFHKFCKHFAREMYDEHIYLPSEQNGELDHVMKQYDRLGFSGAMGSMDVTHIGWSKCPYNLARSYTGKEGVPTVGYQVTVNHAGRAIAVTEGFTDSTNDKTTVCWDAVVEKIRTDNQYTEKTFDVYNEDGTTTTLKGCYLLVDNGYHKWKILMEPTKYPLSENDILFSKRLESVRKDVECF 309
BLAST of mRNA_P-littoralis_Contig1294.9.2 vs. uniprot
Match: A0A6H5KNX4_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNX4_9PHAE) HSP 1 Score: 232 bits (592), Expect = 8.230e-70 Identity = 121/244 (49.59%), Postives = 151/244 (61.89%), Query Frame = 2
Query: 170 PHATSVLASLHILGRGNFFEDMTQMSHMSESTIQNSFHKFNKLFAREFYHSHVHLPTAGEDQ-EQVMKHYDHLGFTGAIGSTDVTHIKWAACPHSWEKLYTGKEGFATIAFQAIVDHTGRLLAATKGFAGSMNDKTIIRYDAAVTKIRKDPIYT----------------------------EKVYTLFDKDGTPFQRKGNYSIVDNGYNKWAILIPPTKWPTTDMETRWSRALESVRKDVECF 814
P VLA L ILGRGN F + QMS MS T+Q FHKF + FARE Y +HLPT + + VMK YD LGFTGA+GS DVTHI W+ CP++ + YTGKEGF TIA+Q VDH GR +A T+GF GS NDKTI+ +D AV KI D YT EK + ++++DGT KG Y +VDNGY+KW ILI P+K+P ++ + +S+ LESVRKDVECF
Sbjct: 81 PVEHKVLAWLTILGRGNCFASIYQMSWMSAKTVQGMFHKFCRHFAREMYDEQIHLPTEESGKLDHVMKQYDRLGFTGAVGSMDVTHIAWSRCPYNQARSYTGKEGFPTIAYQVTVDHAGRAIAVTEGFTGSTNDKTIVCWDTAVEKIWTDKHYTXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKTFDVYNEDGTTTTLKGCYLLVDNGYHKWQILIEPSKYPLSENDLLFSKRLESVRKDVECF 324
BLAST of mRNA_P-littoralis_Contig1294.9.2 vs. uniprot
Match: A0A6H5JBE2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBE2_9PHAE) HSP 1 Score: 226 bits (575), Expect = 4.360e-67 Identity = 113/216 (52.31%), Postives = 146/216 (67.59%), Query Frame = 2
Query: 170 PHATSVLASLHILGRGNFFEDMTQMSHMSESTIQNSFHKFNKLFAREFYHSHVHLPTAGEDQ-EQVMKHYDHLGFTGAIGSTDVTHIKWAACPHSWEKLYTGKEGFATIAFQAIVDHTGRLLAATKGFAGSMNDKTIIRYDAAVTKIRKDPIYTEKVYTLFDKDGTPFQRKGNYSIVDNGYNKWAILIPPTKWPTTDMETRWSRALESVRKDVECF 814
P VLA L ILGRGN F + +S MS T+Q FH+F + FA E Y H+ LP+ + ++VM Y+ LGF GA+GSTDVTHI W+ CP++ + YTGKEG T+ +Q V+H GR+LA T+GF GS NDKTII D AV +IR D Y EK +T+ KDGT KG Y IVDNGY+KW +LI P+K+P ++ + +S+ LESVRKDVECF
Sbjct: 123 PVEHKVLACLTILGRGNVFGSIYNLSWMSTPTVQKVFHQFCEHFATEMYDEHIFLPSEENGELDRVMGQYEKLGFPGAMGSTDVTHIGWSRCPYNQGRSYTGKEGKPTVGYQVTVNHAGRVLAVTEGFTGSTNDKTIICCDEAVDRIRTDKQYAEKPFTVHKKDGTTETLKGCYLIVDNGYHKWRMLIEPSKYPLSEADLLFSKRLESVRKDVECF 338
BLAST of mRNA_P-littoralis_Contig1294.9.2 vs. uniprot
Match: A0A6H5K796_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K796_9PHAE) HSP 1 Score: 220 bits (561), Expect = 5.310e-66 Identity = 109/204 (53.43%), Postives = 141/204 (69.12%), Query Frame = 2
Query: 203 ILGRGNFFEDMTQMSHMSESTIQNSFHKFNKLFAREFYHSHVHLPTAGEDQEQVMKHYDHLGFTGAIGSTDVTHIKWAACPHSWEKLYTGKEGFATIAFQAIVDHTGRLLAATKGFAGSMNDKTIIRYDAAVTKIRKDPIYTEKVYTLFDKDGTPFQRKGNYSIVDNGYNKWAILIPPTKWPTTDMETRWSRALESVRKDVECF 814
+LG+GN F+D+ Q+S MS+S Q +FHKF + FA E + H++LPT G ++VM + LG+TGA GSTDVTHI W CP + + +TGKEGF TIA+ VDH GR LA T GF G+ NDKTIIRYD+ V KIR YTE+ Y L +GT R+G + IVDNGY++W LI P+K+P + +T +SR LESVRKDV CF
Sbjct: 43 VLGKGNCFDDVEQLSKMSKSMAQPTFHKFCRHFAAEMFDEHIYLPT-GTYLDEVMGIFHQLGWTGACGSTDVTHIGWNMCPFTLGRSFTGKEGFPTIAYDVTVDHDGRDLAVTNGFTGATNDKTIIRYDSGVNKIRTASQYTEREYKLRKANGTKRMRRGCFLIVDNGYHEWVTLIAPSKYPQRNEDTAFSRDLESVRKDVGCF 245
BLAST of mRNA_P-littoralis_Contig1294.9.2 vs. uniprot
Match: A0A6H5J792_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J792_9PHAE) HSP 1 Score: 202 bits (514), Expect = 3.530e-62 Identity = 95/125 (76.00%), Postives = 107/125 (85.60%), Query Frame = 2
Query: 365 MKHYDHLGFTGAIGSTDVTHIKWAACPHSWEKLYTGKEGFATIAFQAIVDHTGRLLAATKGFAGSMNDKTIIRYDAAVTKIRKDPIYTEKVYTLFDKDGTPFQRKGNYSIVDNGYNKWAILIPPT 739
M+ YD LGFTGAIGSTDVTHI+WA CP+SW + YTGKEG +IA+QAIVDHTGR+LA TKGFAG+MNDKTII YD AV KIR+DP+YTEKVYTL DK+G PF+RKGNYSIVDNGYNK PPT
Sbjct: 1 MEVYDLLGFTGAIGSTDVTHIRWAFCPYSWARQYTGKEGLPSIAYQAIVDHTGRILAVTKGFAGAMNDKTIIWYDTAVAKIRRDPVYTEKVYTLSDKNGQPFERKGNYSIVDNGYNK--ATPPPT 123
BLAST of mRNA_P-littoralis_Contig1294.9.2 vs. uniprot
Match: A0A6H5JUX7_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUX7_9PHAE) HSP 1 Score: 206 bits (524), Expect = 5.950e-61 Identity = 107/211 (50.71%), Postives = 135/211 (63.98%), Query Frame = 2
Query: 185 VLASLHILGRGNFFEDMTQMSHMSESTIQNSFHKFNKLFAREFYHSHVHLPTAGEDQ-EQVMKHYDHLGFTGAIGSTDVTHIKWAACPHSWEKLYTGKEGFATIAFQAIVDHTGRLLAATKGFAGSMNDKTIIRYDAAVTKIRKDPIYTEKVYTLFDKDGTPFQRKGNYSIVDNGYNKWAILIPPTKWPTTDMETRWSRALESVRKDVECF 814
VLA L ILG+GN F + QMS MS T+Q FHKF +LFARE Y H+HLP + VMK YD LG CP++ + YTGK+ F TIA+Q VDH R +A T+GF GS NDKTI+ +DAAV KIR D YTEK + L+++DGT KG Y + DNGY+KW ILI P+K+P ++ + +S+ LESVRKDVECF
Sbjct: 21 VLAWLTILGKGNCFASIFQMSWMSAKTVQGVFHKFCRLFAREMYDEHIHLPAEESGKLHHVMKQYDRLG-----------------CPYNQARSYTGKDWFPTIAYQVTVDHASRAIAVTEGFTGSTNDKTIVCWDAAVDKIRTDKQYTEKTFDLYNEDGTTTTLKGCYFLDDNGYHKWQILIEPSKYPLSEDDLLFSKRLESVRKDVECF 214
BLAST of mRNA_P-littoralis_Contig1294.9.2 vs. uniprot
Match: A0A6H5KVT5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVT5_9PHAE) HSP 1 Score: 197 bits (501), Expect = 4.480e-60 Identity = 90/118 (76.27%), Postives = 105/118 (88.98%), Query Frame = 2
Query: 365 MKHYDHLGFTGAIGSTDVTHIKWAACPHSWEKLYTGKEGFATIAFQAIVDHTGRLLAATKGFAGSMNDKTIIRYDAAVTKIRKDPIYTEKVYTLFDKDGTPFQRKGNYSIVDNGYNKW 718
M+ YD LGFTGAIGSTDVTHI+WA CP+SW + YTGKEGF +IA+QAIV+ TG +LA TKGFAG+MNDKTIIRYD AV KIR+DP+YTEKVYTLFDK+G PF+R+GN SIVDNGYNK+
Sbjct: 1 MEAYDLLGFTGAIGSTDVTHIRWACCPYSWARQYTGKEGFPSIAYQAIVNDTGLVLAVTKGFAGAMNDKTIIRYDTAVAKIRRDPVYTEKVYTLFDKNGQPFEREGNNSIVDNGYNKF 118 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1294.9.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1294.9.2 >prot_P-littoralis_Contig1294.9.2 ID=prot_P-littoralis_Contig1294.9.2|Name=mRNA_P-littoralis_Contig1294.9.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=226bp VKPPRCSQTTLLVTTAATRKKPSLLDQFRCRSPFSPRQLSTLRARTGTKLback to top mRNA from alignment at P-littoralis_Contig1294:22745..33157+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig1294.9.2 ID=mRNA_P-littoralis_Contig1294.9.2|Name=mRNA_P-littoralis_Contig1294.9.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=10413bp|location=Sequence derived from alignment at P-littoralis_Contig1294:22745..33157+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig1294:22745..33157+ >mRNA_P-littoralis_Contig1294.9.2 ID=mRNA_P-littoralis_Contig1294.9.2|Name=mRNA_P-littoralis_Contig1294.9.2|organism=Pylaiella littoralis U1_48|type=CDS|length=678bp|location=Sequence derived from alignment at P-littoralis_Contig1294:22745..33157+ (Pylaiella littoralis U1_48)back to top |