mRNA_P-littoralis_Contig1293.8.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig1293.8.1
Unique NamemRNA_P-littoralis_Contig1293.8.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig1293.8.1 vs. uniprot
Match: A0A6H5KE45_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE45_9PHAE)

HSP 1 Score: 459 bits (1182), Expect = 3.180e-157
Identity = 240/363 (66.12%), Postives = 271/363 (74.66%), Query Frame = 1
Query:    1 WYQRFRKRHRFSIRRRTSMGQKLTKGHEGMAWATLMKLREALVKRAGAIYARRYPPAP------------------------ELGNMDQTPVQHEMPAETTLQQRGDKDARIATGGE-------------------------SEKGRFTLCLAVTADGKKVPVRIIFKGTPFIPTVT-GVGRATQPRKNSIATKILPQNR----------------RNWCDLRECKLWIKESWRVRPNNGSVLKQRACILVLDDFKCHKDDEFIAFLKRDTNTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGMYTTHSASAARDPKTGKLTPPGRGAVSTWCKDAWATITPEMVKTCFKIYGLSLALDGSED 891
            WYQRFRKR++FSIRRRTS+G +L KGHEGMAWATLMKLR+AL++RAG IYA+RYPPAP                        +LGNMDQTPVQ+EMP ETTL++ G KDARIATG                            EK RFTLCLAV+ADG KVP+RIIFKGTPF+P  T G G+ATQPRKNSIA ++LP NR                ++WCDLRE KLWIK+SW++RPNNGSV++QR CILVLDDFKCHKDD FIA LKR+ NTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGMYT H+A AARDPKTGKL PPGRGAV+TWCK+AWA+ITPE VKTCFKI GL+LALDGSED
Sbjct:  121 WYQRFRKRNKFSIRRRTSVGIRLPKGHEGMAWATLMKLRKALLERAGEIYAQRYPPAPGESPIRGEDLSSSQLELVTDELFKDLGNMDQTPVQYEMPVETTLEKTGAKDARIATGAGVCCIRTILKPLPYPPTSCILPPPPGKEKERFTLCLAVSADGTKVPLRIIFKGTPFVPPATPGKGKATQPRKNSIAWEVLPANRSKHGLPVGGMSFGVQEKSWCDLREYKLWIKDSWKLRPNNGSVVRQRRCILVLDDFKCHKDDGFIAALKREANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGMYTAHTAKAARDPKTGKLAPPGRGAVATWCKNAWASITPETVKTCFKICGLTLALDGSED 483          
BLAST of mRNA_P-littoralis_Contig1293.8.1 vs. uniprot
Match: A0A6H5K8Y4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8Y4_9PHAE)

HSP 1 Score: 468 bits (1203), Expect = 1.270e-153
Identity = 237/332 (71.39%), Postives = 267/332 (80.42%), Query Frame = 1
Query:    1 WYQRFRKRHRFSIRRRTSMGQKLTKGHEGMAWATLMKLREALVKRAGAIYARRYPPAP------------------------ELGNMDQTPVQHEMPAETTLQQRGDKDARIATGGESEKGRFTLCLAVTADGKKVPVRIIFKGTPFIPTVT-GVGRATQPRKNSIATKILPQNR----------------RNWCDLRECKLWIKESWRVRPNNGSVLKQRACILVLDDFKCHKDDEFIAFLKRDTNTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGMYTTHSASAARDPKTGKLTPPGRGAVSTWCKDAWATITPEMVKTCFKIYGLSLA 873
            WYQRF KR++FSIRRRTS+GQKL KGHEGMAWATLMKLR+AL++RAG IYA+RYPPAP                        ELGNMDQTPVQHEMP ETTL+  G KDARIATGG+ EK RFTLCLAV+ADGKKVP+RIIFKGTPF+P  T G G+ATQPRKNSIA ++LP NR                ++WCDLRECKLWIK+SW++RPNNGS+++QR CILVLDDFKCHKDD FIA LKR+ NTIVIFIPGGL PL QPLDRMLNKQMKRLLRGMYT H+A AARDPKTGKL PPGRGAV+TWCK+AWA+ITPE+VKTCFKI GL+LA
Sbjct:  188 WYQRFCKRNKFSIRRRTSVGQKLPKGHEGMAWATLMKLRKALLERAGEIYAQRYPPAPGESPIRGEDLSSSQLELVTDELFEELGNMDQTPVQHEMPVETTLENTGAKDARIATGGK-EKERFTLCLAVSADGKKVPLRIIFKGTPFVPPATPGKGKATQPRKNSIAWEVLPANRSKHGLPVGGMSFGVQEKSWCDLRECKLWIKDSWKLRPNNGSIVRQRRCILVLDDFKCHKDDGFIAALKREANTIVIFIPGGLIPLFQPLDRMLNKQMKRLLRGMYTAHTAKAARDPKTGKLVPPGRGAVATWCKNAWASITPEIVKTCFKICGLTLA 518          
BLAST of mRNA_P-littoralis_Contig1293.8.1 vs. uniprot
Match: A0A6H5KRZ1_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRZ1_9PHAE)

HSP 1 Score: 429 bits (1102), Expect = 5.060e-145
Identity = 221/328 (67.38%), Postives = 250/328 (76.22%), Query Frame = 1
Query:   31 FSIRRRTSMGQKLTKGHEGMAWATLMKLREALVKRAGAIYARRYPPAP------------------------ELGNMDQTPVQHEMPAETTLQQRGDKDARIATGGESEKGRFTLCLAVTADGKKVPVRIIFKGTPFIPTVT-GVGRATQPRKNSIATKILPQNR----------------RNWCDLRECKLWIKESWRVRPNNGSVLKQRACILVLDDFKCHKDDEFIAFLKRDTNTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGMYTTHSASAARDPKTGKLTPPGRGAVSTWCKDAWATITPEMVKTCFKIYGLSLALDGSED 891
            F+IRR TS+GQKL KGHEGMAWATLMKLR+AL++RAG IYA+RYPPAP                        ELGNMDQTPVQHE P E   +    +  R       E+ RFTLCLAV+ADGKKVP+RIIFKGTPF+P  T G G+ATQPRKNSIA ++LP NR                ++WCDLRECKLWIK+SW++RPNNGS+++QR CILVLDDFKCHKDD FIA LKR+ NTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGMYT H+A AARDPKTGKL PPGRGAV+TWCK+AWA+ITPE  KTCFKI GL+LALDGSED
Sbjct:  168 FNIRRCTSVGQKLPKGHEGMAWATLMKLRKALLERAGKIYAQRYPPAPGENPIRGEDLSSSQLELVTDELFEELGNMDQTPVQHETPVERLWK----RPVRRMPASPPEE-RFTLCLAVSADGKKVPLRIIFKGTPFVPPATPGKGKATQPRKNSIAWEVLPANRSKHGLPVGGMSFGVQEKSWCDLRECKLWIKDSWKLRPNNGSIVRQRRCILVLDDFKCHKDDGFIAALKREANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGMYTAHTAKAARDPKTGKLAPPGRGAVATWCKNAWASITPETAKTCFKICGLTLALDGSED 490          
BLAST of mRNA_P-littoralis_Contig1293.8.1 vs. uniprot
Match: A0A6H5K6L9_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6L9_9PHAE)

HSP 1 Score: 424 bits (1089), Expect = 1.240e-144
Identity = 225/338 (66.57%), Postives = 253/338 (74.85%), Query Frame = 1
Query:    1 WYQRFRKRHRFSIRRRTSMGQKLTKGHEGMAWATLMKLREALVKRAGAIYARRYPPAP------------------------ELGNMDQTPVQHEMPAETTLQQRGDKDARIATGGESEKGRFTLCLAVTADGKKVPVRIIFKGTPFIP-TVTGVGRATQPRKNSIATKILPQNR----------------RNWCDLRECKLWIKESWRVRPNNGSVLKQRACILVLDDFKCHKDDEFIAFLKRDTNTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGMYTTHSASAARDPKTGKLTPPGRGAVSTWCKDAWATITPEMVKTCFKIYGLSLALDGSED 891
            WYQRFRKR+ FSIRRRTS+GQKL KG EGMAWAT+MKLREALVKRAG IYARR+PPAP                        ELGNMDQTPVQHE+P ETTL++ G KDARI+TGG+ EK RFTL LAV ADGKKV  RIIFKGTPF P TV+G G++T PRKNS+A +I P NR                ++W D REC  WI  SW++RPNNGS+++QR CILVLDDFKCHKD+ FIA LKRD NTIVIFIPG LTPLLQPLDRMLNKQMKRLLR  YT +SASA  D ++GKL PP RG VSTWCK+AW + TPE VKTCF I GL+LALDGSED
Sbjct:   34 WYQRFRKRNGFSIRRRTSVGQKLPKGDEGMAWATVMKLREALVKRAGEIYARRHPPAPDESPIKGEDLTSEQLASVEAEVFEELGNMDQTPVQHEIPVETTLEKTGAKDARISTGGK-EKERFTLVLAVMADGKKVSPRIIFKGTPFTPPTVSGKGKSTLPRKNSVAWEIHPANRAKHGHPANGMSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALKRDANTIVIFIPGRLTPLLQPLDRMLNKQMKRLLRRKYTAYSASAVADARSGKLKPPERGVVSTWCKEAWESSTPETVKTCFMICGLTLALDGSED 370          
BLAST of mRNA_P-littoralis_Contig1293.8.1 vs. uniprot
Match: A0A6H5JUK2_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUK2_9PHAE)

HSP 1 Score: 417 bits (1071), Expect = 1.350e-142
Identity = 227/367 (61.85%), Postives = 257/367 (70.03%), Query Frame = 1
Query:    1 WYQRFRKRHRFSIRRRTSMGQKLTKGHEGMAWATLMKLREALVKRAGAIYARRYPPAP------------------------ELGNMDQTPVQHEMPAETTLQQRGDKDARIATGGESEKGRFTLCLAVTADGKKVPVRIIFKGTPFIP-TVTGVGRATQPRKNSIATKILPQNR----------------RNWCDLRECKLWIKESWRVRPNNGSVLKQRACILVLDDFKCHKDDEFIAFLKRDTNTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGMYTTHSASAARDPKTGKLTPPGRGAVSTWCKDAWATITPEMV-----------------------------KTCFKIYGLSLALDGSED 891
            WYQRFRKR+ FSIRRRTS+GQKL KG+EGMAWAT+MKLREALV+RAG IYARR+PPAP                        ELGNMDQTPVQHEMP ETTL++ G KDARI+TGG+ EK RFTL LAV ADGKKV  RIIFKGTPFIP  V+G G++T PRKNS+A +I P NR                ++W D REC  WI  SW++RPNNGS+++QR CILVLDDFKCHKD+ +IA LKRD NTIVI IPGGLTPLLQPLDRMLNKQMKRLLRG YT +SASA  D ++GKL PP RG VSTWCK+AW +ITPE V                             KTCFKI GL+LALDGSED
Sbjct:   34 WYQRFRKRNGFSIRRRTSVGQKLPKGYEGMAWATVMKLREALVRRAGEIYARRHPPAPDESPIKGEDLTFEQLASVEAEVFKELGNMDQTPVQHEMPVETTLEKTGAKDARISTGGK-EKERFTLVLAVMADGKKVSPRIIFKGTPFIPPAVSGKGKSTLPRKNSVAWEIHPANRAKHDHPANGMSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGYIAALKRDANTIVIVIPGGLTPLLQPLDRMLNKQMKRLLRGKYTAYSASAVADARSGKLKPPERGVVSTWCKEAWESITPETVSSVRKERFALGDVRAWSGENPACSVXETVKTCFKICGLTLALDGSED 399          
BLAST of mRNA_P-littoralis_Contig1293.8.1 vs. uniprot
Match: A0A6H5JHT8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHT8_9PHAE)

HSP 1 Score: 423 bits (1087), Expect = 1.840e-141
Identity = 222/338 (65.68%), Postives = 253/338 (74.85%), Query Frame = 1
Query:    1 WYQRFRKRHRFSIRRRTSMGQKLTKGHEGMAWATLMKLREALVKRAGAIYARRYPPAP------------------------ELGNMDQTPVQHEMPAETTLQQRGDKDARIATGGESEKGRFTLCLAVTADGKKVPVRIIFKGTPFIP-TVTGVGRATQPRKNSIATKILPQNR----------------RNWCDLRECKLWIKESWRVRPNNGSVLKQRACILVLDDFKCHKDDEFIAFLKRDTNTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGMYTTHSASAARDPKTGKLTPPGRGAVSTWCKDAWATITPEMVKTCFKIYGLSLALDGSED 891
            WYQRFRKR+ FSIRRRTS+GQKL KG+EGMAWAT+MKL EALVKRAG IYARR+PPAP                        E+GNMDQ PVQHEMP ETTL + G KDARI+TGG +EK RFTL LAVTADGKKV  RIIF+GTPFIP TV+G G++T+PRKN +A ++ P NR                ++W D REC  WI  SW++RPNNGS+++QR  ILVLDDFKCH D+ FIA LKRD NTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRG YT +S SA  D ++GKL PP RG VSTWCK+AW +ITPE VKTC KI GL+LALDGSED
Sbjct:  228 WYQRFRKRNGFSIRRRTSVGQKLPKGYEGMAWATVMKLCEALVKRAGEIYARRHPPAPDESPIKGEDLNSEQLASVEAEVFEEVGNMDQMPVQHEMPVETTLDKTGAKDARISTGGGNEKERFTLVLAVTADGKKVSPRIIFEGTPFIPPTVSGKGKSTRPRKNPVAWEMHPANRAKHGHPANGMSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPRILVLDDFKCHNDEGFIAALKRDANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGKYTAYSPSAVADARSGKLKPPERGVVSTWCKEAWESITPETVKTCSKICGLTLALDGSED 565          
BLAST of mRNA_P-littoralis_Contig1293.8.1 vs. uniprot
Match: A0A6H5KEE8_9PHAE (DDE-1 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEE8_9PHAE)

HSP 1 Score: 416 bits (1068), Expect = 8.130e-140
Identity = 220/338 (65.09%), Postives = 247/338 (73.08%), Query Frame = 1
Query:    1 WYQRFRKRHRFSIRRRTSMGQKLTKGHEGMAWATLMKLREALVKRAGAIYARRYPPAP------------------------ELGNMDQTPVQHEMPAETTLQQRGDKDARIATGGESEKGRFTLCLAVTADGKKVPVRIIFKGTPFIPTVT-GVGRATQPRKNSIATKILPQNR----------------RNWCDLRECKLWIKESWRVRPNNGSVLKQRACILVLDDFKCHKDDEFIAFLKRDTNTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGMYTTHSASAARDPKTGKLTPPGRGAVSTWCKDAWATITPEMVKTCFKIYGLSLALDGSED 891
            WYQRFRKR++F+IRRRTS+GQKL KGHEGMAWATLMKLR+AL++RAG IYA+RYPPAP                        ELGNMDQTPVQHE            +DA     G  EK RFTLCLAV+ADGKKVP+RIIFKGTPF+P  T G G+ATQPRKNSIA ++LP NR                ++WCDLRECKLWIK SW++RPNNGS+++QR CILVLDDFKCHKDD FIA LKR+ NTIVIFIPGGLTPLLQ LDRMLNKQMKRLL              PKTGKL PPGRGAV+TWCK+AWA+ITPE VKTCFKI GL+LALDGSED
Sbjct:  175 WYQRFRKRNKFNIRRRTSVGQKLPKGHEGMAWATLMKLRKALLERAGEIYAQRYPPAPGESPIRGEDLSSSQLELVTDELFEELGNMDQTPVQHE------------RDA-----GGKEKERFTLCLAVSADGKKVPLRIIFKGTPFVPPATPGKGKATQPRKNSIAWEVLPANRSKHGLPVEGMSFGVQEKSWCDLRECKLWIKGSWKLRPNNGSIVRQRRCILVLDDFKCHKDDGFIAALKREANTIVIFIPGGLTPLLQLLDRMLNKQMKRLLXXXXXXXXXXXXXXPKTGKLAPPGRGAVATWCKNAWASITPETVKTCFKICGLTLALDGSED 495          
BLAST of mRNA_P-littoralis_Contig1293.8.1 vs. uniprot
Match: A0A6H5JTG5_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTG5_9PHAE)

HSP 1 Score: 407 bits (1045), Expect = 5.470e-136
Identity = 219/346 (63.29%), Postives = 248/346 (71.68%), Query Frame = 1
Query:    1 WYQRFRKRHRFSIRRRTSMGQKLTKGHEGMAWATLMKLREALVKRAGAIYARRYPPAP------------------------ELGNMDQTPVQHEMPAETTLQQRGDKDARIATGGESEKGRFTLCLAVTADGKKVPVRIIFKGTPFIP-TVTGVGRATQPRKNSIATKILPQNR----------------RNWCDLRECKLWIKESWRV--------RPNNGSVLKQRACILVLDDFKCHKDDEFIAFLKRDTNTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGMYTTHSASAARDPKTGKLTPPGRGAVSTWCKDAWATITPEMVKTCFKIYGLSLALDGSED 891
            WYQRFRKR+ FSIRRR S+GQKL KG+EGMAWAT+ KLREALVKRAG IYARR+PPAP                        ELGNMDQTPVQHEMP ETTL+  G KDARI+TGG+ EK RFTL LAV ADGK V   IIFKGTPFIP TV+G G++T PRKNS+A ++ P NR                ++W   +EC  WI  SW++        RPNNGS+++QR CILVLDDFKCHKD+ FIA L RD NTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRG YT +SA A  D ++GKL PP RG VSTWCK+AW  +T E V TCFKI GL+LALDGSED
Sbjct:  188 WYQRFRKRNGFSIRRRASVGQKLPKGYEGMAWATVTKLREALVKRAGEIYARRHPPAPDESPIKGEDLTSEQPASVEAEVFEELGNMDQTPVQHEMPVETTLEDTGGKDARISTGGK-EKERFTLVLAVMADGKMVSPCIIFKGTPFIPPTVSGKGKSTLPRKNSVAWEVHPANRAKHGHPANGMSFGVQEKSWSGQQECNGWIPGSWKLCPNNGSMXRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALNRDANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGKYTAYSAPAVADARSGKLKPPERGVVSTWCKEAWEFVTSETVNTCFKICGLTLALDGSED 532          
BLAST of mRNA_P-littoralis_Contig1293.8.1 vs. uniprot
Match: A0A6H5KRZ8_9PHAE (DDE-1 domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRZ8_9PHAE)

HSP 1 Score: 404 bits (1037), Expect = 3.710e-134
Identity = 220/350 (62.86%), Postives = 248/350 (70.86%), Query Frame = 1
Query:    1 WYQRFRKRHRFSIRRRTSMGQKLTKGHEGMAWATLMKLREALVKRAGAIYARRYPPAP------------------------ELGNMDQTPVQHEMPAETTLQQRGDKDARIATGGESEKGRFTLCLAVTADGKKVPVRIIFKGTPFIP-TVTGVGRATQPRKNSIA-----------------------------TKILPQNRRNWCDLRECKLWIKESWRVRPNNGSVLKQRACILVLDDFKCHKDDEFIAFLKRDTNTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGMYTTHSASAARDPKTGKLTPPGRGAVSTWCKDAWATITPEMVKTCFKIYGLSLALDGSE 888
            WYQRFRKR+ FSIRRRTS+GQKL KG+EGMAWAT+MKLREALVKRAG IYARR+PPAP                        ELGNMDQTPVQHEMP ETTL++ G KDARI+TGGE EK RFTL LAV ADGKKV  RIIFKGTPFIP TV+G  ++T PRKNS+A                             T  +P   ++W D REC  WI  SW++RPNNGS+++QR CILVLDDFKCHKD+ FIA LKR   T VIFIPGGLT LLQPLDRMLNKQMKRLLRG YT  SASA  D ++GKL PP  G VSTWCK+AW +IT + V+TCFKI GL+LALDGSE
Sbjct:  216 WYQRFRKRNGFSIRRRTSVGQKLPKGYEGMAWATVMKLREALVKRAGEIYARRHPPAPDESPIKGEDLTSEQLASVEAEVFEELGNMDQTPVQHEMPVETTLEKTGAKDARISTGGE-EKERFTLVLAVMADGKKVSPRIIFKGTPFIPPTVSGKVKSTLPRKNSVAWEIHSANXARSGCHGGRQNDVSPRIIFKGTPFIPPTEKSWSDQRECNGWIPGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALKRGAKT-VIFIPGGLTSLLQPLDRMLNKQMKRLLRGKYTACSASAVADARSGKLNPPEHGVVSTWCKEAWESITSKTVETCFKICGLTLALDGSE 563          
BLAST of mRNA_P-littoralis_Contig1293.8.1 vs. uniprot
Match: A0A6H5KYG9_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYG9_9PHAE)

HSP 1 Score: 386 bits (991), Expect = 7.140e-128
Identity = 206/345 (59.71%), Postives = 239/345 (69.28%), Query Frame = 1
Query:    1 WYQRFRKRHRFSIRRRTSMGQKLTKGHEGMAWATLMKLREALVKRAGAIYARRYPPAP------------------------ELGNMDQTPVQHEMPAETTLQQRGDKDARIATG-GESEKG---------RFTLCLAVTADGKKVPVRIIFKGTP--------------FIPTVTGVGRATQPRKNSIATKILPQNRRNWCDLRECKLWIKESWRVRPNNGSVLKQRACILVLDDFKCHKDDEFIAFLKRDTNTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGMYTTHSASAARDPKTGKLTPPGRGAVSTWCKDAWATITPEMVKTCFKIYGLSLALDGSED 891
            WYQRFRKR++FSIRRRTS+GQKL KGHEGMAWATLMKLR+AL++RAG IYA+RYPPAP                        ELGNMDQTPVQHEMP ETTL++ G KDARIATG GE  +          R       ++   ++  R+   G                F  T    G   +   + +  K       +WCDLRECKLWIK+SW++RPNNGS+++QR CILVLDDFKCHKDD FIA L ++ NTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGMYT ++A AARDPKTG L PPGRGAV+TWCK+AWA+ITPE VKTCFKI GL+LALDGSED
Sbjct:  183 WYQRFRKRNKFSIRRRTSVGQKLPKGHEGMAWATLMKLRKALLERAGEIYAQRYPPAPGESPIRGEDLSSSQLELVTDELFEELGNMDQTPVQHEMPVETTLEKAGAKDARIATGAGEKRRNASRSAWLPRRMARSRLASSSRVRLSFRLPRPGXXXXXXXXXXXXXXXYFPRTAPSTGSPWEACPSGVQEK-------SWCDLRECKLWIKDSWKLRPNNGSIVRQRRCILVLDDFKCHKDDGFIAALNKEANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGMYTANTAKAARDPKTGNLAPPGRGAVATWCKNAWASITPETVKTCFKICGLTLALDGSED 520          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1293.8.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KE45_9PHAE3.180e-15766.12DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5K8Y4_9PHAE1.270e-15371.39Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KRZ1_9PHAE5.060e-14567.38DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5K6L9_9PHAE1.240e-14466.57DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5JUK2_9PHAE1.350e-14261.85DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5JHT8_9PHAE1.840e-14165.68Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KEE8_9PHAE8.130e-14065.09DDE-1 domain-containing protein n=2 Tax=Ectocarpus... [more]
A0A6H5JTG5_9PHAE5.470e-13663.29DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5KRZ8_9PHAE3.710e-13462.86DDE-1 domain-containing protein n=3 Tax=Ectocarpus... [more]
A0A6H5KYG9_9PHAE7.140e-12859.71DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1293contigP-littoralis_Contig1293:17924..19189 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7FXD3
Preferred namePOGK
PFAMsBrkDBD,DDE_1,HTH_Tnp_Tc5,KRAB
Model size891
Max annot lvl2759|Eukaryota
KEGG koko:K09228
Hectar predicted targeting categorymitochondrion
Exons4
Evalue2.82e-108
EggNOG OGsKOG3105@1|root,KOG3105@2759|Eukaryota
DescriptionDNA binding
Cds size891
COG categoryCH
BRITEko00000,ko03000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789578.1400445-CDS-P-littoralis_Contig1293:17923..180981680789578.1400445-CDS-P-littoralis_Contig1293:17923..18098Pylaiella littoralis U1_48CDSP-littoralis_Contig1293 17924..18098 +
1680789578.151826-CDS-P-littoralis_Contig1293:18170..182771680789578.151826-CDS-P-littoralis_Contig1293:18170..18277Pylaiella littoralis U1_48CDSP-littoralis_Contig1293 18171..18277 +
1680789578.1627176-CDS-P-littoralis_Contig1293:18532..187051680789578.1627176-CDS-P-littoralis_Contig1293:18532..18705Pylaiella littoralis U1_48CDSP-littoralis_Contig1293 18533..18705 +
1680789578.174913-CDS-P-littoralis_Contig1293:18753..191891680789578.174913-CDS-P-littoralis_Contig1293:18753..19189Pylaiella littoralis U1_48CDSP-littoralis_Contig1293 18754..19189 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1293.8.1prot_P-littoralis_Contig1293.8.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig1293 17924..19189 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig1293.8.1

>prot_P-littoralis_Contig1293.8.1 ID=prot_P-littoralis_Contig1293.8.1|Name=mRNA_P-littoralis_Contig1293.8.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=297bp
WYQRFRKRHRFSIRRRTSMGQKLTKGHEGMAWATLMKLREALVKRAGAIY
ARRYPPAPELGNMDQTPVQHEMPAETTLQQRGDKDARIATGGESEKGRFT
LCLAVTADGKKVPVRIIFKGTPFIPTVTGVGRATQPRKNSIATKILPQNR
RNWCDLRECKLWIKESWRVRPNNGSVLKQRACILVLDDFKCHKDDEFIAF
LKRDTNTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGMYTTHSASAARDP
KTGKLTPPGRGAVSTWCKDAWATITPEMVKTCFKIYGLSLALDGSED
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mRNA from alignment at P-littoralis_Contig1293:17924..19189+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig1293.8.1 ID=mRNA_P-littoralis_Contig1293.8.1|Name=mRNA_P-littoralis_Contig1293.8.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1266bp|location=Sequence derived from alignment at P-littoralis_Contig1293:17924..19189+ (Pylaiella littoralis U1_48)
TGGTACCAACGTTTTCGCAAGCGGCACAGGTTCAGCATCCGCCGACGTAC CAGCATGGGCCAAAAGCTAACGAAGGGACACGAGGGCATGGCGTGGGCGA CGCTGATGAAGCTGCGCGAGGCTCTCGTGAAGCGCGCTGGGGCGATCTAC GCTCGGCGCTACCCCCCTGCACCTGGTGAGAGCTCCGTCGACGGGAATGA CCTGACTTCCGAGCAGCTGGAGTCGGTCGCCGAAGAGGTGTTCGAAGAAC TCGGCAACATGGACCAGACGCCAGTCCAGCACGAGATGCCGGCGGAGACG ACGCTGCAGCAGCGCGGCGATAAGGACGCTCGCATTGCCACAGGAGGTGA GAGTGTACTGCGGTGCTGCGAGTTGTGTACTAGGAGTACCTACATGTTTC CCTGTTCCTATCAAGTATTGGCGTCTTCGTTGTTGCAGGTTTCTTTTTGG TCTTGGTGTTTTGTACTCCGTATTTTTTAGTTCTGGGAAATCCGTACGTG TACCGTCTGCAGCCATCCATGTCAAGCGCCATCTGCTGGTCAGCATTGTT CAAACCCCTCCTTCTACTCGCCTACCCCCTGCCGTCGTGTGCACCCCTCC CCAGGAAAGGAGAAGGGACGCTTTACGCTTTGCCTTGCTGTCACGGCGGA CGGGAAGAAGGTTCCGGTGCGCATCATCTTTAAGGGGACGCCATTCATCC CGACGGTCACCGGTGTGGGTAGGGCAACTCAGCCGCGGAAGAATTCCATC GCGACTAAGATCCTTCCCCAGAACCGTCGCAAGTTCGGGCACCCCATGGG AGGCATGTCTTTCGGCGTGCAGGAGAAAAGCTGGTGCGACCTGCGGGAGT GCAAGCTCTGGATCAAGGAGAGCTGGAGGGTCCGCCCGAACAACGGCAGC GTCCTCAAGCAGCGGGCATGCATCTTGGTGCTGGACGACTTCAAGTGCCA CAAGGACGACGAGTTCATCGCCTTCCTCAAGAGGGACACCAACACCATCG TCATCTTCATCCCAGGCGGGTTGACTCCTCTCCTCCAACCGCTGGATCGC ATGCTCAACAAGCAGATGAAGCGGCTGCTGCGGGGCATGTACACGACGCA CTCGGCGTCGGCGGCCAGAGACCCCAAGACGGGCAAGCTGACACCGCCTG GGCGTGGTGCCGTCTCGACGTGGTGCAAGGACGCGTGGGCAACTATCACG CCGGAGATGGTCAAGACTTGTTTCAAGATCTACGGTCTCTCGCTTGCGCT CGACGGCAGCGAAGAC
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Coding sequence (CDS) from alignment at P-littoralis_Contig1293:17924..19189+

>mRNA_P-littoralis_Contig1293.8.1 ID=mRNA_P-littoralis_Contig1293.8.1|Name=mRNA_P-littoralis_Contig1293.8.1|organism=Pylaiella littoralis U1_48|type=CDS|length=891bp|location=Sequence derived from alignment at P-littoralis_Contig1293:17924..19189+ (Pylaiella littoralis U1_48)
TGGTACCAACGTTTTCGCAAGCGGCACAGGTTCAGCATCCGCCGACGTAC
CAGCATGGGCCAAAAGCTAACGAAGGGACACGAGGGCATGGCGTGGGCGA
CGCTGATGAAGCTGCGCGAGGCTCTCGTGAAGCGCGCTGGGGCGATCTAC
GCTCGGCGCTACCCCCCTGCACCTGAACTCGGCAACATGGACCAGACGCC
AGTCCAGCACGAGATGCCGGCGGAGACGACGCTGCAGCAGCGCGGCGATA
AGGACGCTCGCATTGCCACAGGAGGTGAGAGTGAGAAGGGACGCTTTACG
CTTTGCCTTGCTGTCACGGCGGACGGGAAGAAGGTTCCGGTGCGCATCAT
CTTTAAGGGGACGCCATTCATCCCGACGGTCACCGGTGTGGGTAGGGCAA
CTCAGCCGCGGAAGAATTCCATCGCGACTAAGATCCTTCCCCAGAACCGT
CGCAACTGGTGCGACCTGCGGGAGTGCAAGCTCTGGATCAAGGAGAGCTG
GAGGGTCCGCCCGAACAACGGCAGCGTCCTCAAGCAGCGGGCATGCATCT
TGGTGCTGGACGACTTCAAGTGCCACAAGGACGACGAGTTCATCGCCTTC
CTCAAGAGGGACACCAACACCATCGTCATCTTCATCCCAGGCGGGTTGAC
TCCTCTCCTCCAACCGCTGGATCGCATGCTCAACAAGCAGATGAAGCGGC
TGCTGCGGGGCATGTACACGACGCACTCGGCGTCGGCGGCCAGAGACCCC
AAGACGGGCAAGCTGACACCGCCTGGGCGTGGTGCCGTCTCGACGTGGTG
CAAGGACGCGTGGGCAACTATCACGCCGGAGATGGTCAAGACTTGTTTCA
AGATCTACGGTCTCTCGCTTGCGCTCGACGGCAGCGAAGAC
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