prot_P-littoralis_Contig1290.1.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-littoralis_Contig1290.1.1
Unique Name	prot_P-littoralis_Contig1290.1.1
Type	polypeptide
Organism	Pylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length	434

Homology

[Close]

BLAST of mRNA_P-littoralis_Contig1290.1.1 vs. uniprot
Match: D7G5U8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5U8_ECTSI)

HSP 1 Score: 112 bits (281), Expect = 4.830e-24
Identity = 60/139 (43.17%), Postives = 88/139 (63.31%), Query Frame = 0

Query:  288 EMSPLVTTALTVLRNESNTEDWFTFSQHLNALVRKSFTLGLLNDRELLDQLQFRGDDMVEQGGHPAAVLRVFSEMLPNKRHVSRETTFRDRGKLRDINKLHS----ASTAVSGAAHGYPGPSHLAAHHAARVAASSTAP 422
            +M+PL TTALT LR E   EDW++F  H++A++ K  TLGL+  R +LD   +RG+DM+ Q G P  V  +F++++PN R++SRETT RDR +L+ I+ +      A+T  +    GY G    AA  A+ +AA  TAP
Sbjct:  180 QMNPLPTTALTPLRTEKGKEDWYSFKPHVDAIIAKGVTLGLMTWRSMLDDFVYRGNDMLLQFGVPEKVFGIFTDLMPNARNISRETTLRDRSRLKAIDTISGGWKLAATLATAHLSGYAGAYQQAASQASTIAAGITAP 318

The following BLAST results are available for this feature:

BLAST of mRNA_P-littoralis_Contig1290.1.1 vs. uniprot

BLAST of mRNA_P-littoralis_Contig1290.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
D7G5U8_ECTSI	4.830e-24	43.17	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..67
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 206..239
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 419..434
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 414..434

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-littoralis_Contig1290	contig	P-littoralis_Contig1290:1210..5541 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Pylaiella littoralis U1_48 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-littoralis_Contig1290.1.1	mRNA_P-littoralis_Contig1290.1.1	Pylaiella littoralis U1_48	mRNA	P-littoralis_Contig1290 1019..5541 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-littoralis_Contig1290.1.1 ID=prot_P-littoralis_Contig1290.1.1|Name=mRNA_P-littoralis_Contig1290.1.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=434bp
MSGRVTRSHAPTPAAAAAPPAQPRAAGTRSRGAGRRDSNSGRARASSVPA
AAPTAHASSAATPTLPIRPDWQTATVVDSSSSLEELPCMGTLGLEGTERK
VDPARVFFSDGLAFRDTTAADSTIRCYHLVTQVQPLGGGLPSFYQASAQA
SDIDRGVSGVGTAQFRTRLARSVVAECVVQLALSAGLLKASGGCVFLPTE
AEIQTRAGRHQRSAASAAPPTPLPAPAAPAAPAGAPAGASTEAGVDPLVA
RLQTLLAPPATEAAGAAALAPEDQRVVNYFSLQHENFEMSPLVTTALTVL
RNESNTEDWFTFSQHLNALVRKSFTLGLLNDRELLDQLQFRGDDMVEQGG
HPAAVLRVFSEMLPNKRHVSRETTFRDRGKLRDINKLHSASTAVSGAAHG
YPGPSHLAAHHAARVAASSTAPQPRSRGSSVRGG