mRNA_P-littoralis_Contig129.116.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig129.116.1 vs. uniprot
Match: D7FNW3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNW3_ECTSI) HSP 1 Score: 203 bits (516), Expect = 3.430e-61 Identity = 110/170 (64.71%), Postives = 122/170 (71.76%), Query Frame = 1
Query: 514 QDLTLVSLMELAFDTLGGNTQWIVAGAVGVALVTRADVGTLVYVVGSLFNAVFSKILKKTINQVRPEGARLSDPGMPSSHAMSLFYLGTYLVIGLQEHGVLTLDPSLPQWPLGVTGTQTLLGMYAFSASLWRVKAGFHTLPQVSVGAAVGAVDAVLWYHFCQAYLSSQAR 1023
+D TL++ +EL D LG +TQW VAGAVGVAL+TRADV TLVYV+GSL NAVFSK+LKKTINQVRP+GA+LSDPGMPSSHAM TQTLLGMYA +ASLWRVKAGFHTLPQV+VGAAVGAVDAVLWYH C YL SQAR
Sbjct: 3 RDKTLLAGIELGLDVLGSSTQWAVAGAVGVALITRADVDTLVYVLGSLINAVFSKVLKKTINQVRPDGAQLSDPGMPSSHAM----------------------------------TQTLLGMYALTASLWRVKAGFHTLPQVAVGAAVGAVDAVLWYHLCHPYLLSQAR 138
BLAST of mRNA_P-littoralis_Contig129.116.1 vs. uniprot
Match: A0A4D9CV92_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CV92_9STRA) HSP 1 Score: 135 bits (339), Expect = 2.270e-34 Identity = 76/178 (42.70%), Postives = 102/178 (57.30%), Query Frame = 1
Query: 607 LVTRADVGTLVYVVGSLFNAVFSKILKKTINQVRPEGARLSDPGMPSSHAMSLFYLGTYLVIGL-QEHGVLTLDPSLPQWPLGVTGTQTLLGMYAFSASLWRVKAGFHTLPQVSVGAAVGAVDAVLWYHFCQAYLSSQARAF---FGGPDIPVGLAVGVCLVTFLTFGNAQRKISKIL 1128
L+ R D + + VG++ NA+ KILK+ I + RP+GA L DPGMPSSHAM+LFY+ +L L Q+ G+ L P WPL V T L G+Y AS WRV +G HT Q+ +GA VG + W C Q AF + G +PV VGV +V LT G+ +RKI+K +
Sbjct: 2 LLVRRDAAIVNFTVGAILNAMLGKILKRLIKEARPDGAVLEDPGMPSSHAMALFYMSAFLGSALCQKRGIGMLPP---WWPLDVLPTIALGGLYVSVASAWRVFSGLHTSAQILIGAGVGGGVGLAWERECAMVCDHQVGAFLARYKGGQVPVVYLVGVMVVGALTVGSVERKIAKAM 176
BLAST of mRNA_P-littoralis_Contig129.116.1 vs. uniprot
Match: A0A0G4EJI9_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EJI9_VITBC) HSP 1 Score: 139 bits (349), Expect = 3.230e-34 Identity = 78/195 (40.00%), Postives = 110/195 (56.41%), Query Frame = 1
Query: 562 GGNTQWIVAGAVGVALVTRADVGTLVYVVGSLFNAVFSKILKKTINQVRPEGARLSDPGMPSSHAMSLFYLGTYLVIGLQEHGVLTLDPSLPQWPLGVTGTQTLLGMYAFSASLWRVKAGFHTLPQVSVGAAVGAVDAVLWYHF----CQAYLSSQARAFFGGPDIPVGLAVGVCLVTFLTFGNAQRKISKILGR 1134
G + +++V+G V +ALV R D V+V+GSL NAV K+LK+ N RP+ A +SDPGMPSSHAMSL +L L+ ++ D W L L+ YA +++WRV+A HT QV+VG AVG ++WY ++ Q G P +P G VG+CL+ LT G+ +RKI K+L R
Sbjct: 134 GLSARFLVSGLVFLALVMRRDAAVTVWVIGSLLNAVLGKVLKRLFNHSRPDEATVSDPGMPSSHAMSLSFLSVSLI-----RAIIDADRLPAWWRLDKRWAVVLVSSYALLSAVWRVRANLHTSEQVAVGGAVGGTVGLVWYQLGKNGINKWMERQFVLMTGKPLLPWGWLVGICLLGSLTVGSVERKIHKLLVR 323
BLAST of mRNA_P-littoralis_Contig129.116.1 vs. uniprot
Match: A0A6U4CT78_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4CT78_9STRA) HSP 1 Score: 135 bits (339), Expect = 7.020e-34 Identity = 81/210 (38.57%), Postives = 117/210 (55.71%), Query Frame = 1
Query: 541 ELAFDTLGGNTQWIVAGAVGVALVTRADVGTLVYVVGSLFNAVFSKILKKTINQVRPEGARLSDPGMPSSHAMSLFYLGTYLVIGLQEHGVLTLDPSLPQWPLGVT-----GTQTLLG----MYAFSASLWRVKAGFHTLPQVSVGAAVGAVDAVLWYHFCQAYLSSQARAFFGGPDIPVGLAVGVCLVTFLTFGNAQRKISKILGRKKE 1143
E A +G +T+W V+G V ALV R DV L +VVGS+ NA+ SK+LK+ +NQ RP+ A +DPGMPSSHA SLF++G Y + + T P LG+ G Q L Y ++WRV G+HTLPQV+VGA VG+ A+ WY C+ + +AF P +P + + LT G K++++L ++K+
Sbjct: 29 ERAAYAIGRSTKWTVSGGVAAALVLRRDVPALAFVVGSVLNALSSKLLKRLLNQKRPDTATQTDPGMPSSHAQSLFFIGGYAMRAVAA----TPAPEALAAALGLPAKAGPGLQLALNPVILAYISYCAVWRVAVGYHTLPQVAVGAVVGSAAALGWYAACRPLVHDFLKAFVPEP-LPFFAVAAIGVGGVLTVGKVGEKLNRLLAKRKD 233
BLAST of mRNA_P-littoralis_Contig129.116.1 vs. uniprot
Match: A0A7S2WS98_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WS98_9STRA) HSP 1 Score: 133 bits (335), Expect = 9.780e-34 Identity = 72/151 (47.68%), Postives = 98/151 (64.90%), Query Frame = 1
Query: 559 LGGNTQWIVAGAVGVALVTRADVGTLVYVVGSLFNAVFSKILKKTINQVRPEGARLSDPGMPSSHAMSLFYLGTYLVIGLQEHGVLTLDPSLPQWPLGVT-GTQTLLGMYAFSASLWRVKAGFHTLPQVSVGAAVGAVDAVLWYHFCQAYL 1008
+G + + +V AV VAL+ R D L +V+G+L NAV +K+LK+ INQ RPEGAR DPGMPSSHA SLF+L ++L Q L P LP + G + G LL YA+ AS WRV AG+HT PQV VG VG++ +LW+ C++++
Sbjct: 45 IGSSARILVGSAVAVALLVRRDAAALGWVLGALLNAVLAKVLKRLINQSRPEGARSDDPGMPSSHAQSLFFLASFLAAAAQFWEPLP-SPLLPTYTAGHSAGIAVLLLAYAWLASAWRVGAGYHTAPQVLVGGVVGSLTGMLWFFACRSHI 194
BLAST of mRNA_P-littoralis_Contig129.116.1 vs. uniprot
Match: A0A7S1XLD3_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XLD3_9STRA) HSP 1 Score: 126 bits (317), Expect = 2.160e-30 Identity = 76/196 (38.78%), Postives = 109/196 (55.61%), Query Frame = 1
Query: 583 VAGAVGVALVTRADVGTLVYVVGSLFNAVFSKILKKTINQVRPEGARLSDPGMPSSHAMSLFYLGTYLVIGLQEHGVLTLDPSLPQWPLGVT-----GTQTLLG----MYAFSASLWRVKAGFHTLPQVSVGAAVGAVDAVLWYHFCQAYLSSQARAFFGGPDIPVGLAVGVCLVTFLTFGNAQRKISKILGRKKE 1143
V+G V ALV R DV L +VVGS+ NA+ SK+LK+ +NQ RP+ A +DPGMPSSHA SLF++G Y + + T P LG+ G Q L Y ++WRV G+HTLPQV+VGA VG+ A+ WY C+ + +AF P +P + + LT G K++++L ++K+
Sbjct: 70 VSGGVAAALVLRRDVPALAFVVGSVLNALSSKLLKRLLNQKRPDTATQTDPGMPSSHAQSLFFIGGYAMRAVAA----TPAPEALAAALGLPAKAGPGLQLALNPVILAYISYCAVWRVAVGYHTLPQVAVGAVVGSAAALGWYAACRPLVHDFLKAFVPEP-LPFFAVAAIGVGGVLTVGKVGEKLNRLLAKRKD 260
BLAST of mRNA_P-littoralis_Contig129.116.1 vs. uniprot
Match: A0A6H5KI89_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KI89_9PHAE) HSP 1 Score: 124 bits (312), Expect = 6.130e-30 Identity = 63/82 (76.83%), Postives = 72/82 (87.80%), Query Frame = 1
Query: 514 QDLTLVSLMELAFDTLGGNTQWIVAGAVGVALVTRADVGTLVYVVGSLFNAVFSKILKKTINQVRPEGARLSDPGMPSSHAM 759
+D TL + +EL D LG +TQW+VAGAVGVAL+TRADV TLVYV+GSL NAVFSK+LKK INQVRPEGA+LSDPGMPSSHAM
Sbjct: 130 RDKTLPAGIELGLDVLGSSTQWVVAGAVGVALITRADVDTLVYVLGSLINAVFSKVLKKNINQVRPEGAQLSDPGMPSSHAM 211
BLAST of mRNA_P-littoralis_Contig129.116.1 vs. uniprot
Match: K8Z811_NANGC (Dolichyldiphosphatase (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8Z811_NANGC) HSP 1 Score: 125 bits (314), Expect = 7.750e-30 Identity = 69/147 (46.94%), Postives = 89/147 (60.54%), Query Frame = 1
Query: 547 AFDTLGGNTQWIVAGAVGVALVTRADVGTLVYVVGSLFNAVFSKILKKTINQVRPEGARLSDPGMPSSHAMSLFYLGTYLVIGL-QEHGVLTLDPSLPQWPLGVTGTQTLLGMYAFSASLWRVKAGFHTLPQVSVGAAVGAVDAVLW 984
AF LG +T+W VA V V L+ R D + + VG++ NA+ KILK+ I + RP+GA L DPGMPSSHAM+LFY+ +L L Q+ G+ L P WPL V T L G+Y AS WRV +G HT Q+ VGA VG + W
Sbjct: 126 AFQLLGKSTRWTVASLVAVMLLVRRDAAIVNFTVGAILNAMLGKILKRLIKEARPDGAVLEDPGMPSSHAMALFYMSAFLGSALCQKRGIGVLPP---WWPLDVLPTIALGGLYVSVASAWRVFSGLHTSAQILVGAGVGGGVGLAW 269
BLAST of mRNA_P-littoralis_Contig129.116.1 vs. uniprot
Match: L1JU71_GUITC (acidPPc domain-containing protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JU71_GUITC) HSP 1 Score: 117 bits (294), Expect = 1.460e-27 Identity = 71/196 (36.22%), Postives = 104/196 (53.06%), Query Frame = 1
Query: 568 NTQWIVAGAVGVALVTRADVGTLVYVVGSLFNAVFSKILKKTINQVRPEGARLSDPGMPSSHAMSLFYLGTYLVIGLQEHGVLTLDPSLPQWPLGVTG--TQTLLGMYAFSASLWRVKAGFHTLPQVSVGAAVGAVDAVLWYHFCQAYLSSQAR--AFFGGPDIPVGLAVGVCLVTFLTFGNAQRKISKILGRKKE 1143
NT+W+V+ L+ R D T+ + G+L NA K+LK+ + + RP+GA +SDPGMPSSHAMSLF+L YL + WP+ T +LL +SA+ WRV+AGFHT Q+ VG+ +G + + W++F +++ R F G +V L G+ +RKISK L K E
Sbjct: 28 NTRWLVSLTAAAFLIWRRDAVTIAAIGGALGNAALGKLLKRLLAEKRPDGAPVSDPGMPSSHAMSLFFLSLYLSAAINVW---------TDWPMAARTIVTSSLLIFSTYSAA-WRVRAGFHTPAQILVGSVLGGFNGMAWFYFNHQNMAALQRLDVFLKESSALPWALCGSLIVGALLVGSVERKISKFLKSKSE 213
BLAST of mRNA_P-littoralis_Contig129.116.1 vs. uniprot
Match: A0A7S1NE02_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1NE02_9EUGL) HSP 1 Score: 117 bits (293), Expect = 2.480e-27 Identity = 73/202 (36.14%), Postives = 101/202 (50.00%), Query Frame = 1
Query: 535 LMELAFDTLGGNTQWIVAGAVGVALVTRADVGTLVYVVGSLFNAVFSKILKKTINQVRPEGARLSDPGMPSSHAMSLFYLGTYLVIGLQEHGVLTLDPSLPQWPLGVTGTQTLLGMYAFSASLWRVKAGFHTLPQVSVGAAVGAVDAVLWYHFCQAYLSSQARAFFGGPDIPVGLAVGVCLVTFLTFGNAQRKISKILGRKK 1140
L A D +G T++ V+ VG +LV L VVG NA K+LK+ IN+ RPEGAR DPGMPSSHAMSL +L Y I L G+ WP V T L+ +Y+ ++ ++R++ GFHT QV VG G V+A+ W HF L + + +P + +GV + L Q + KK
Sbjct: 26 LCRKAIDVVGSTTKYTVSALVGTSLVLIRTTDVLNMVVGGGLNAALCKVLKRVINKSRPEGARYKDPGMPSSHAMSLGFLSCYTSIILLGLGL--------AWPQVVAAT-VLMQVYSLASLVYRIQKGFHTPAQVQVGYTFGTVNALSWNHFFSHALDCKVGCYLQAGKLPWSMTLGVMFLVGLVVMERQLRTGFSFRGKK 218 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig129.116.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig129.116.1 >prot_P-littoralis_Contig129.116.1 ID=prot_P-littoralis_Contig129.116.1|Name=mRNA_P-littoralis_Contig129.116.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=383bp RKWRGPGCADCEICPKSVKSAVHALDATARHLIQGAAVIFPMHCLGLVSFback to top mRNA from alignment at P-littoralis_Contig129:471875..475404- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig129.116.1 ID=mRNA_P-littoralis_Contig129.116.1|Name=mRNA_P-littoralis_Contig129.116.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=3530bp|location=Sequence derived from alignment at P-littoralis_Contig129:471875..475404- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig129:471875..475404- >mRNA_P-littoralis_Contig129.116.1 ID=mRNA_P-littoralis_Contig129.116.1|Name=mRNA_P-littoralis_Contig129.116.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1149bp|location=Sequence derived from alignment at P-littoralis_Contig129:471875..475404- (Pylaiella littoralis U1_48)back to top |