mRNA_P-littoralis_Contig129.111.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig129.111.1
Unique NamemRNA_P-littoralis_Contig129.111.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
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BLAST of mRNA_P-littoralis_Contig129.111.1 vs. uniprot
Match: A0A6H5JT74_9PHAE (RRM domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JT74_9PHAE)

HSP 1 Score: 365 bits (936), Expect = 7.330e-121
Identity = 196/257 (76.26%), Postives = 219/257 (85.21%), Query Frame = 2 
Query:   65 MATTRRRPASIIVSSLLLTSGFTLSQGFCFGGGALCSSNARPRCRGATSAERRATQQ---GGGLTMRRGLSYKGKNGPGLTNVRRIVTTRERISQSEEPCKVMISNLDYTLTEQDVEEFCSTAGAVAGVKLVKKWYAKTSKGYGFVDFDQPLTATIAIENLNGKELKGRVVELKPAITTREKKMKKALREWEERCLEEDRRVAQGYPRRELPLPAKKKMADFGITVDEFLAMVGRTNSRSAKKPPTAAEYNEEVGHD 826
            M T RRR  +I+ S+L   +G T  QGFCF   AL  SN R  C GAT AER+ATQQ   GGGLTMRRGLSYKGKNGPGLTN+ R+VTTR+R+ +SEEPCKVMISNLDY+LTE DV EFCSTAGAVAGVKLVKKWYAKTSKGYGFVDFDQPLTATIAIE LNGKELKGRVVELKPAIT+REK+ K+ALR+WE+RCLEEDRRV QGYPRRE+PLP KKKMADFG+TVDEFL +VGRTNSR+AKK P   +Y EE+G+D
Sbjct:    1 MPTVRRRSFAIMASALCGAAGLTRVQGFCFVP-ALTGSNTR--CHGAT-AERQATQQAQQGGGLTMRRGLSYKGKNGPGLTNIGRVVTTRKRVLESEEPCKVMISNLDYSLTENDVAEFCSTAGAVAGVKLVKKWYAKTSKGYGFVDFDQPLTATIAIETLNGKELKGRVVELKPAITSREKRRKQALRDWEQRCLEEDRRVEQGYPRREVPLPEKKKMADFGVTVDEFLEIVGRTNSRTAKKQP---KYAEEIGYD 250
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BLAST of mRNA_P-littoralis_Contig129.111.1 vs. uniprot
Match: W7TTT9_9STRA (Rnp-1 like rna-binding protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TTT9_9STRA)

HSP 1 Score: 80.1 bits (196), Expect = 5.390e-14
Identity = 40/92 (43.48%), Postives = 59/92 (64.13%), Query Frame = 2 
Query:  311 IVTTRERISQSEEPCKVMISNLDYTLTEQDVEEFCSTAGAVAGVKLVKKWYAKTSKGYGFVDFDQPLTATIAIENLNGKELKGRVVELKPAI 586
            I + RE I     P ++M+SNL +  + +++E F S AG V  VK++       SKGYGFV F +PL+AT A+E L+G EL GR ++++PAI
Sbjct:   52 INSMRENIEGEPNPTQIMVSNLPFDTSTEELEAFASQAGQVVNVKIILDRETGRSKGYGFVLFTEPLSATYALERLDGMELGGRPLKIRPAI 143
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BLAST of mRNA_P-littoralis_Contig129.111.1 vs. uniprot
Match: A0A7S2V4S3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V4S3_9STRA)

HSP 1 Score: 70.9 bits (172), Expect = 3.180e-10
Identity = 35/77 (45.45%), Postives = 49/77 (63.64%), Query Frame = 2 
Query:  353 CKVMISNLDYTLTEQDVEEFCSTAGAVAGVKLVKKWYAKTSKGYGFVDFDQPLTATIAIENLNGKELKGRVVELKPA 583
            CKV +SN  YT TE+++ E+CS AG V  VK++K  + K S+GYG+V++     AT AI  LN  +L GR V +  A
Sbjct:   80 CKVHVSNFPYTTTEEELREWCSQAGEVFAVKIIKNQWTKKSQGYGYVEYTISPYATAAINFLNETQLGGRTVYIAEA 156
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BLAST of mRNA_P-littoralis_Contig129.111.1 vs. uniprot
Match: UPI0019E9B91D (RNA-binding protein n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=UPI0019E9B91D)

HSP 1 Score: 65.1 bits (157), Expect = 2.360e-9
Identity = 30/75 (40.00%), Postives = 47/75 (62.67%), Query Frame = 2 
Query:  359 VMISNLDYTLTEQDVEEFCSTAGAVAGVKLVKKWYAKTSKGYGFVDFDQPLTATIAIENLNGKELKGRVVELKPA 583
            + + NL Y +TE+D+++     G V  + ++K  Y+  SKG+GFV+      A  AIE LNGKELKGR++++  A
Sbjct:    3 IYVGNLSYEVTEEDLKQAFGAFGQVESINIIKDKYSGESKGFGFVEMPAKAEAQSAIEGLNGKELKGRMLKVSEA 77
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BLAST of mRNA_P-littoralis_Contig129.111.1 vs. uniprot
Match: B8LC97_THAPS (RNA binding protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8LC97_THAPS)

HSP 1 Score: 65.1 bits (157), Expect = 3.290e-9
Identity = 33/80 (41.25%), Postives = 51/80 (63.75%), Query Frame = 2 
Query:  347 EPCKVMISNLDYTLTEQDVEEFCSTA-GAVAGVKLVKKWYAKTSKGYGFVDFDQPLTATIAIENLN---GKELKGRVVEL 574
            +P KV I NL +  TE+DV +  +T  G +  VK+V+ W +  SKGYGF+ F +P+ AT A++++N   G  +KGR + L
Sbjct:   13 DPNKVFIGNLPFDATEEDVNQLFATHWGRIESVKIVRDWKSGKSKGYGFIQFYEPMVATSAMKSVNEGKGLRIKGRPIRL 92
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BLAST of mRNA_P-littoralis_Contig129.111.1 vs. uniprot
Match: A0A661LRS4_9DELT (RNA-binding protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A661LRS4_9DELT)

HSP 1 Score: 64.3 bits (155), Expect = 3.860e-9
Identity = 31/75 (41.33%), Postives = 46/75 (61.33%), Query Frame = 2 
Query:  359 VMISNLDYTLTEQDVEEFCSTAGAVAGVKLVKKWYAKTSKGYGFVDFDQPLTATIAIENLNGKELKGRVVELKPA 583
            + + NL Y +TE+D+ +    +G V  V+++   Y+  SKG+GFV+      A  AI+ LNGKELKGRV+ L  A
Sbjct:    3 IYVGNLSYEVTEEDLRQAFEQSGQVESVRIIMDKYSGRSKGFGFVEMPSNHEAQAAIKGLNGKELKGRVLNLNEA 77
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BLAST of mRNA_P-littoralis_Contig129.111.1 vs. uniprot
Match: A0A8J6P332_9DELT (RNA-binding protein n=1 Tax=Candidatus Desulfatibia vada TaxID=2841696 RepID=A0A8J6P332_9DELT)

HSP 1 Score: 64.7 bits (156), Expect = 4.270e-9
Identity = 33/75 (44.00%), Postives = 45/75 (60.00%), Query Frame = 2 
Query:  359 VMISNLDYTLTEQDVEEFCSTAGAVAGVKLVKKWYAKTSKGYGFVDFDQPLTATIAIENLNGKELKGRVVELKPA 583
            + + NL Y +TE+D++E     G V  VK++K  Y   SKG+GFV+      A  AIE LNGKELKGR + +  A
Sbjct:    3 IYVGNLSYEVTEEDLKEAFEVFGEVDTVKVIKDNYTGRSKGFGFVEMSVKAEAQSAIEGLNGKELKGRSLNVNEA 77
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BLAST of mRNA_P-littoralis_Contig129.111.1 vs. uniprot
Match: A0A2H0RA58_9BACT (RNA-binding protein n=1 Tax=candidate division WWE3 bacterium CG10_big_fil_rev_8_21_14_0_10_32_10 TaxID=1975090 RepID=A0A2H0RA58_9BACT)

HSP 1 Score: 63.2 bits (152), Expect = 6.450e-9
Identity = 31/71 (43.66%), Postives = 45/71 (63.38%), Query Frame = 2 
Query:  356 KVMISNLDYTLTEQDVEEFCSTAGAVAGVKLVKKWYAKTSKGYGFVDFDQPLTATIAIENLNGKELKGRVV 568
            K+ + NLDYTLT+ D+E+  S  G V   K++    ++ SKG+GFV F++   A  AI+ LN KEL GR +
Sbjct:    4 KLFVGNLDYTLTDADLEKAFSKFGTVLEAKVITDMQSRRSKGFGFVTFEKAEDAAEAIKELNEKELNGRKI 74
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BLAST of mRNA_P-littoralis_Contig129.111.1 vs. uniprot
Match: A0A3C1A1Y7_9CHLR (RNA-binding protein n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A3C1A1Y7_9CHLR)

HSP 1 Score: 63.2 bits (152), Expect = 8.850e-9
Identity = 37/91 (40.66%), Postives = 54/91 (59.34%), Query Frame = 2 
Query:  356 KVMISNLDYTLTEQDVEEFCSTAGAVAGVKLVKKWYAKTSKGYGFVDFDQPLTATIAIENLNGKELKGRVVELKPAITTREKKMKKALREW 628
            K+ + NLDYT+TEQD+E   S  G V    +VK  Y+  SKG+ FV+F     A  A + LNG++LKGR + +  A   RE+K  +  R++
Sbjct:    4 KLYVGNLDYTVTEQDLETLFSEHGEVLSTTVVKDRYSGRSKGFAFVEFANNEDAQKAKQALNGQDLKGRALRVDDA---REQKRDRGPRDY 91
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BLAST of mRNA_P-littoralis_Contig129.111.1 vs. uniprot
Match: A0A661LIA6_9DELT (RNA-binding protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A661LIA6_9DELT)

HSP 1 Score: 63.2 bits (152), Expect = 8.850e-9
Identity = 32/75 (42.67%), Postives = 45/75 (60.00%), Query Frame = 2 
Query:  359 VMISNLDYTLTEQDVEEFCSTAGAVAGVKLVKKWYAKTSKGYGFVDFDQPLTATIAIENLNGKELKGRVVELKPA 583
            + I +L Y  TE+D+++     G V  VK++K  Y+  SKG+GFV+      A  AIE LNGKELKGR + +  A
Sbjct:    3 IYIGSLSYKATEEDLKQAFEAFGQVESVKIIKDNYSGQSKGFGFVEMPDKAEAQSAIEGLNGKELKGRRLNVNEA 77
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig129.111.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JT74_9PHAE7.330e-12176.26RRM domain-containing protein n=2 Tax=Ectocarpus T... [more]
W7TTT9_9STRA5.390e-1443.48Rnp-1 like rna-binding protein n=2 Tax=Monodopsida... [more]
A0A7S2V4S3_9STRA3.180e-1045.45Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
UPI0019E9B91D2.360e-940.00RNA-binding protein n=1 Tax=Proteobacteria bacteri... [more]
B8LC97_THAPS3.290e-941.25RNA binding protein (Fragment) n=1 Tax=Thalassiosi... [more]
A0A661LRS4_9DELT3.860e-941.33RNA-binding protein n=1 Tax=Deltaproteobacteria ba... [more]
A0A8J6P332_9DELT4.270e-944.00RNA-binding protein n=1 Tax=Candidatus Desulfatibi... [more]
A0A2H0RA58_9BACT6.450e-943.66RNA-binding protein n=1 Tax=candidate division WWE... [more]
A0A3C1A1Y7_9CHLR8.850e-940.66RNA-binding protein n=1 Tax=Chloroflexi bacterium ... [more]
A0A661LIA6_9DELT8.850e-942.67RNA-binding protein n=1 Tax=Deltaproteobacteria ba... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig129contigP-littoralis_Contig129:455356..460543 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog880071.Fleli_2018
Preferred nameykfA
PFAMsRRM_1
Model size1603
Max annot lvl976|Bacteroidetes
Hectar predicted targeting categorysignal peptide
Exons4
Evalue8.26e-10
EggNOG OGsCOG0724@1|root,COG0724@2|Bacteria,4NV5J@976|Bacteroidetes,47X4S@768503|Cytophagia
Ec32 ortholog descriptionRNA recognition motif domain
Ec32 orthologEc-12_002780.1
DescriptionPFAM RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
Cds size798
COG categoryS
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig129.111.1prot_P-littoralis_Contig129.111.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig129 456097..460479 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789576.8799748-UTR-P-littoralis_Contig129:455355..4560961680789576.8799748-UTR-P-littoralis_Contig129:455355..456096Pylaiella littoralis U1_48UTRP-littoralis_Contig129 455356..456096 -
1680789576.9337275-UTR-P-littoralis_Contig129:460479..4605431680789576.9337275-UTR-P-littoralis_Contig129:460479..460543Pylaiella littoralis U1_48UTRP-littoralis_Contig129 460480..460543 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789576.8910427-CDS-P-littoralis_Contig129:456096..4564781680789576.8910427-CDS-P-littoralis_Contig129:456096..456478Pylaiella littoralis U1_48CDSP-littoralis_Contig129 456097..456478 -
1680789576.9000661-CDS-P-littoralis_Contig129:456812..4569341680789576.9000661-CDS-P-littoralis_Contig129:456812..456934Pylaiella littoralis U1_48CDSP-littoralis_Contig129 456813..456934 -
1680789576.9114888-CDS-P-littoralis_Contig129:457429..4575521680789576.9114888-CDS-P-littoralis_Contig129:457429..457552Pylaiella littoralis U1_48CDSP-littoralis_Contig129 457430..457552 -
1680789576.92462-CDS-P-littoralis_Contig129:460308..4604791680789576.92462-CDS-P-littoralis_Contig129:460308..460479Pylaiella littoralis U1_48CDSP-littoralis_Contig129 460309..460479 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig129.111.1

>prot_P-littoralis_Contig129.111.1 ID=prot_P-littoralis_Contig129.111.1|Name=mRNA_P-littoralis_Contig129.111.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=266bp
MATTRRRPASIIVSSLLLTSGFTLSQGFCFGGGALCSSNARPRCRGATSA
ERRATQQGGGLTMRRGLSYKGKNGPGLTNVRRIVTTRERISQSEEPCKVM
ISNLDYTLTEQDVEEFCSTAGAVAGVKLVKKWYAKTSKGYGFVDFDQPLT
ATIAIENLNGKELKGRVVELKPAITTREKKMKKALREWEERCLEEDRRVA
QGYPRRELPLPAKKKMADFGITVDEFLAMVGRTNSRSAKKPPTAAEYNEE
VGHDDDDGDDDEDLF*
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mRNA from alignment at P-littoralis_Contig129:455356..460543-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig129.111.1 ID=mRNA_P-littoralis_Contig129.111.1|Name=mRNA_P-littoralis_Contig129.111.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=5188bp|location=Sequence derived from alignment at P-littoralis_Contig129:455356..460543- (Pylaiella littoralis U1_48)
CCCACCTCGACACGGACATCCTTTGCCTCCTTTGCTTACCCCTCTGACTA
CCGACTGTGATACGATGGCTACCACACGGAGGAGACCAGCATCCATCATT
GTATCGTCCCTATTGCTCACATCAGGGTTTACGCTTTCCCAGGGGTTTTG
TTTTGGCGGCGGTGCTCTTTGCAGCTCGAACGCAAGGCCTCGATGTCGCG
GTGCGACATCAGCGGAGCGGCGAGCCACACAGCAGGTACGATCAAAGCGG
TACCGCGTTTTCTCACTCTCCGTTCCGACCCTCATTGCTTTCTGCTAAAG
CTATCCGCTCCGTGGGATATCCTCCTGTTGTATTTCAAACAGGCACCCAT
ATGGCTCTATATCCTGCTCTGTGCTTCTACCAAGTTCCATCCGCTGGTAC
AGATCGTACCTTCCACCTGTATTTGGTCTGGTCCAGCCCAAACCGCAGGT
TCAACTCCCGGCCGATACTGCGACATGTTGTTGTTGTGTTTTTGAGACAG
CGAAGCAGAGTTTGTACCAGAATGCCGCTGCTGTGTGTACCGTTTCATGG
TTGAAGTTTGGAGTCGGAGGGGGAATGCCAACCTGTTTTTTACGTGGCGG
CTGCTACATGTCATGAATGCCTGGCTGGGTGTCCTTCCCAAAGAATCCGA
CCAACAAACGAGAGATGGCTGATTACGGGTACGTAGCGTTCTACTGCTGT
ACTACGAAGATACATACTCGGAGTATAATATACGGAGTAATAAGGAGTAC
TTCGTACTTCGGGTCGCCCCGGTGGTTCAGTTGGTTACCCACGCAACCTT
CTGACATGCACGCGTGAGTTCAAGTCCCAGTGTAGTAACACGATCTGGGG
CTTTTTCTCACATTGCGCGTGAAAGTGGAAAGCGATCAGTTCGTGAGTAA
ACAAAATTCGATCGTACCATCGACGAGGGAAAGGGATTGCTGTCCCCTTT
CTCGCGATAAAAGGTCAACCAAAGAGGAAAGCACCGCAGAGGGAAGTGGA
GAAAAAAAAAAAAACTCCTGTGTTGACTTCCCCCTGTGTGACCCCGGTTG
GAGCGTCGACCTACCCGAATGGTGTAGAGTGGCGTCCAATGAGAGGTACG
ACAACACACACACACTTCGAAGTACATCAGATGTAGTCTCCGGAGATCTG
GATGCACTTCATCTGTGCGTTGTTGGAGGCGTAGTGTTGTCGGGCGATTT
TCTGTGTGATGAGCAGATCGCGCGAATATTATATCCCTCTACATATGTAC
ATGAGATAGTAAAAAGTTTACAATACGAAGGACAAAATCAAGACGGTCCA
GTCACGGCCGCTCCACCCTATCATATCCCTGAGAGCCCGTATTAACCGAA
GGCCAAAAAAACGAAATAGCGAAAACGGAAACGCAATTGGTCTCTGATTG
GTCGGGAAAAAAAACGAAAGAGGCGTGTTTTCGTTTCAACGTCCTCCGGG
GAGGCGTTCCTTCGTTTTCGATTTCGCAAAAATAAAAGTGTTTCGGACCT
GTTTTTTTGCGAAAACGAAAACGAAATGCATGGAGTTTGGTAACCTGGGA
AAGCTTGCCCATGAGCCTCCCAGGCAGCGAACTCCTTCACACAGACTGCG
TCTGCGGTACACGGCGGTGCAACAGGCACCAACCCGAACAGAGCGAGGCC
CAATCCACACACTACAGCAGACAGCGCCGAGCCGTTATACCCGCCAGTCA
GCGCAACAGACAGCACACGGCCGTCTACGATACCCACACGCTGACACGAT
GCATTTCACCGCGTTATTTGAAATTTGGCCCCGCGTGTTCTGGGTTTACA
TCATTTTTGGCGTTATCTCCTCTATTCCGCTGCTCCAGCTCCTCGTAGCA
CAAACGCGATAATACCGAAATGGAGTTTTTTATTTTTATTTTCCTGAAGA
ACGAAGTTATTTCGTGTTTGTTTCCGCTAGTTCGTTTTTTTTGGCCTTCC
GTTAATCCCCGCTCTGAGCATCGAGCAAACCGAGCACGAAGCAGTTATTT
CCAACTCAACGTTCGCTTGTTGGAGTGTGGATGGGCCACATTACTTCTGC
CGAAAGACTGCTGTCAATTGAAATTTGAAACGTTCGTTTTAGAATGGAGA
AAACTGGTGTTGTTGTCGTCCAAACTGCTGCCTTGCTCCTCACGTCTTGC
AAGCCGTGCTATCATACATCGATGCACCAAAAAGTGAGCAAGCACTAAAA
CATCAGTTCAGCGGTAGTAGATGGTGACCTGACCGAAATCGATATCCAGT
TGTGTTGCCCGCACCACACCTTCACCAGTAAGCGCAGAGACCTTCCCGTA
CGGGAAAGGGCAGAAATATCACCGGCGATTTGAGGATGTCAGGGGTGGTG
CTTGCGTTCGTCCGCTTTCAACAGTTTTCATCGGATCGCCGAGGTCGGAG
TCGGACGTACACTGCCCACGCCGCAAAGCATGTGGAGAAGGGCCATCATA
TCGTATGTATTTCCTCCGGCTCACCTTTACCGGGGAGAGAACCGCGTGCT
CTTGTTGCTTAGGCACGGGGAAGGGTCGTGTCAACGAGCTTCGAAACGTA
CCCTCATATCTTCTAGTGCTCATCGCAGTGAAAACGCGTGCACGACAAGC
TCGTGGTATCATATTCGACACATATCTCTACGAAGTACTCTGTTGTACCT
CACCCCGGTATCTAGCTCTTGCAGATCGACGGCTGGCATTAGCTAACGCG
AAGGGAATGTGCGCTAGCCATTCCCGCAGCTGCTGATGATACCCTAACGC
TACGAGGTGATGGCTTGATGTCGGGCGAGGGTGAAAGCCAGCGAACTTGA
CATTTGTGTCGTTTTGTGTTTTTGTGCCATTTACTGCTTTACCGCCGCAG
CGTTTGACCACATCTCTGCCCACACCTTGAACCACGGCCCTTTTTGACGG
AAACCCCAACTTGTTGCTTGTCCACTGTTGTTGCTGCTGCCGCTCGCTGC
TTTACCCATTTTCGTCCGAAATCGCTCTTGTCTGGCGGAAGGGGGGGGGG
TTGACAATGAGACGCGGTTTGAGCTACAAGGGGAAGAACGGGCCTGGTTT
GACCAATGTACGGCGCATCGTCACCACCCGCGAGCGAATTTCGCAATCCG
AGGAGCCTTGCAAGGTACAGTAAGGAAATGGAAGCCATTTTTTGCTGTGT
AAGCTCTAGCAGTAGGCCGTGTTGTCATATGATGGGTTCGTATCTACGCA
GAGAATGTTGGCGTTGGCGGTCGACATCCCCCGAACATGTTTGATATGAT
GGAGCTCCGCGTACGGTAAGAAGTTGCACCGGCACGAGCATTTGTATGCT
CGACGGGCGACGTCCCGCGTTGACCTCCGCCCAGCGCGCAGCTGTCGTCC
TTCCTCTGGCAAGCAGGCGGCGATATCGGCCCTTGGCTGTGAACAAGTTT
ACTGAGAAGGACGTGGGGTCGTGTGCGTATCCCCCCCTCCCCAGTTTGAC
GCGTGGTGTCATGATTCGCATACCTTTGTATCATACGAGTATACAACTGG
GACAAACAGCTGCAGTGGTCACATTTAGCACTGCTCAGTGCCATCTTTGT
TCGACGCCACGCCACGTTGAATCCCCAGCAAACCTTCCTCTTTCGTCCTG
GTCAAGCAGGTGATGATCTCGAACCTTGACTACACCTTGACCGAACAAGA
CGTCGAGGAGTTCTGCAGCACAGCGGGTGCTGTTGCCGGGGTGAAGCTCG
TTAAGAAGTGGTACGCCAAGACCTCCAAGGGGTGAGCACCGGCAGCATGG
AATGAAGCCTCTTATTTTCATTCTTGAAGTACGAAGTAATCTTTCACGGG
CATCTCAAAACGAGCGATGTAGAGATACGTTTCTGGGGATGTGATACATG
ACTTTCTTCTTTACCTGCTCAATGCTTTGGTTTCGTCACCGTTTCGCACC
ACATTATTCTTGATCAATCAATACGGGCACGAATTTCAACAGTTCCGAGA
CTTCTTCCATCCCATTCGAACATAAACCGCACTCCCCACGCGTGTTTTTG
TTTTCTTTCGTCTCTCGTACTTTTTTTGTTTTTTTACTCCTTGCTTGTTG
ACTCGGGGAACGAAGGTATGGGTTCGTCGACTTCGACCAGCCGCTAACGG
CGACAATAGCGATTGAGAACCTCAACGGCAAGGAGCTGAAGGGCCGCGTG
GTGGAGCTCAAGCCGGCCATAACCACCCGGGAGAAGAAGATGAAGAAGGC
GCTCCGAGAATGGGAGGAGCGCTGCCTCGAGGAGGACAGGCGGGTCGCGC
AGGGCTACCCGAGGAGAGAGTTGCCGTTGCCGGCGAAGAAGAAGATGGCG
GACTTCGGGATCACGGTGGACGAGTTCCTCGCGATGGTCGGGCGAACCAA
CAGTCGTTCCGCGAAGAAGCCTCCCACGGCGGCCGAGTACAATGAGGAAG
TGGGACACGATGACGACGACGGAGACGACGACGAAGACTTGTTTTGACTG
CGCGTGTGACTCGATCTTGGTGACGGTGTCGAGTTGTGGCGATGTGGTGC
TTGACGAGGATGATACCGGTAACTGCTGTCCTACTGTGTGTGTGTGTGAT
ACGCGTGCGTTTGGTGCCAGCTGCGTTTAACGCGGAGAGTGCTACTGTAA
TGATATACCTGGTTTGGCTTGCCATGGCACACCTAACGGTGAGTATCGGT
AAATGGAGGCTGACTGTCCCAAAATTGACCTTTTTTTTTTCCCTCATCCA
ATCTATTGTTCAAACGGGTCTCCTCGCTCTTCGATCTTGTAGTCTGAGAT
GTGTCGATGTTCAGCCGGAGTACCACAGTTCAAGGATCCCTCTCCACGAG
GGTCTCCACCTTTCAGCGGCGCATGACTTCAATTCAAGCGCTAGAAGGGA
CAGTTTCGTAAAAGTTAGGGGTTAGGCATGATGGCTGTTCAGTCGTGTTG
CGTTTCTAAGAAGACGGACGCACAGTGCTGTAAGGGCTTCGTTGGTATCC
TGGAGGTTGACGTGAGGCTCATCTAAACATGCATATGCATACCCATGTCT
CCTTGCGTCTGATCTCGAACACCACTGTTCACACCAGTAAACGGTGTCGG
TACAAATGTTGACATTTTGTGTACCTCCCTCCTAAAAGCACAAGATGCAT
TGCGCAAACATGAGCGGTCACCAGCAAAGTTGGAAAGGCTTGGGCAAAGG
GGAATTTGGGGAAAACACGCACAGAACGTCGAACACCC
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Coding sequence (CDS) from alignment at P-littoralis_Contig129:455356..460543-

>mRNA_P-littoralis_Contig129.111.1 ID=mRNA_P-littoralis_Contig129.111.1|Name=mRNA_P-littoralis_Contig129.111.1|organism=Pylaiella littoralis U1_48|type=CDS|length=798bp|location=Sequence derived from alignment at P-littoralis_Contig129:455356..460543- (Pylaiella littoralis U1_48)
ATGGCTACCACACGGAGGAGACCAGCATCCATCATTGTATCGTCCCTATT
GCTCACATCAGGGTTTACGCTTTCCCAGGGGTTTTGTTTTGGCGGCGGTG
CTCTTTGCAGCTCGAACGCAAGGCCTCGATGTCGCGGTGCGACATCAGCG
GAGCGGCGAGCCACACAGCAGGGGGGGGGGTTGACAATGAGACGCGGTTT
GAGCTACAAGGGGAAGAACGGGCCTGGTTTGACCAATGTACGGCGCATCG
TCACCACCCGCGAGCGAATTTCGCAATCCGAGGAGCCTTGCAAGGTGATG
ATCTCGAACCTTGACTACACCTTGACCGAACAAGACGTCGAGGAGTTCTG
CAGCACAGCGGGTGCTGTTGCCGGGGTGAAGCTCGTTAAGAAGTGGTACG
CCAAGACCTCCAAGGGGTATGGGTTCGTCGACTTCGACCAGCCGCTAACG
GCGACAATAGCGATTGAGAACCTCAACGGCAAGGAGCTGAAGGGCCGCGT
GGTGGAGCTCAAGCCGGCCATAACCACCCGGGAGAAGAAGATGAAGAAGG
CGCTCCGAGAATGGGAGGAGCGCTGCCTCGAGGAGGACAGGCGGGTCGCG
CAGGGCTACCCGAGGAGAGAGTTGCCGTTGCCGGCGAAGAAGAAGATGGC
GGACTTCGGGATCACGGTGGACGAGTTCCTCGCGATGGTCGGGCGAACCA
ACAGTCGTTCCGCGAAGAAGCCTCCCACGGCGGCCGAGTACAATGAGGAA
GTGGGACACGATGACGACGACGGAGACGACGACGAAGACTTGTTTTGA
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