mRNA_P-littoralis_Contig129.72.2 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig129.72.2 vs. uniprot
Match: D8LJR1_ECTSI (SUI1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJR1_ECTSI) HSP 1 Score: 916 bits (2368), Expect = 0.000e+0 Identity = 550/681 (80.76%), Postives = 584/681 (85.76%), Query Frame = 1
Query: 64 KQDVAERSRSLLKNSAAKKIKTEILAALPTLSKDVIDELMPNKDGIEVVKLATRALVYFHVPTKTPMFFDSDGRNNLFPTVYALWRAQQVLSASSPEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVVHPPVSKFVLNGADVMLPGVVVKDLASVDYVMGERRCVMSSGNPEPYAVGEMIKDKQAVIYGGMSGKGLKVVHCYLDFLWQMGPQTLPNEGFRPDGVYRLPSASTAAPDQEELVD--EVTDDWEYLSDAAXXXXXXXXXXXXXXX------TAGGLSLEGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVVSERLVAAFLNGLKKTLKDAQLPMLVSTFYSSVLLPSRPPGTSIDVKKTRYRKISNFLKEMEERGLVTLKVTKGVQSLVAVDRAHPELRAFKATTVTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-DSETTMKAFELYKLSHNIKKMLGSDAASVAGKHGEYLTPAEARDVLFGYIKAEGLGHPTNKSLVVLNGPLCDNLYKPMNKKAPRVDYPTEAKKAELPRRFLDRLQLHHAILLPGNAHPFVGRGGIPSVSIDVEKRQGNRHATKVRGLEAYGIDPAAFGRQVQKRFACSTAAQPAPGTNGKYQELMLQGHLATELEDLLSEEMGIPRRFLTTGFSKGAKPRKAR 2079
KQDVAERSRSLLKNSAAKKIK EI++ALP L+K++IDELMPNKDGIEVVKLATRALVYFHVPTKTP+FFDSDGRNNLFPTVYALWR Q L++++P XXXXXXXXXXXXXX LVVHPPVSKF+LNGADVMLPGVVV+DLASVDYVMGERRCVMSSGNPEPYAVGEMIKD++ V++GGM+GKG+KVVHCYLD+LWQMG QTLPNEGFRPDGVYRLPSA T +QEELVD EV DDWE LSD A XXXXXXXXXXXXXX GL L+GV EVVSERL AAFLNGLKK+LKDAQLPMLVSTFYSSVLLPSRPPGTSIDVKKT YRKISNFL+EME RGLVTL+VTKGVQSLV V+RAHP+LRAFKATTVTAXXXXXXXXXXXXXXXXXXXXXXXXXXXX D ET++KAFEL+KLSHNIKKMLGSDAAS GK GEYLTPAEARDVLFGYI+AEGL HPTNKSLVVLNGPLCDNLYKPMNKKA RV+YPTEAKKAELPRRFLDRLQLHHAILLPGN HPFVGRGGIPSVSI+VEKRQGNRHATKVRGLEAYGIDP+ GRQVQKRFACSTAAQPAPGTNGKYQELMLQGHLA+ELEDLLSEEMGIPRRFLTTGFSKGAKPRKAR
Sbjct: 60 KQDVAERSRSLLKNSAAKKIKAEIVSALPLLTKEIIDELMPNKDGIEVVKLATRALVYFHVPTKTPLFFDSDGRNNLFPTVYALWRVGQ-LASTTP-------GAXXXXXXXXXXXXXXTEAGRCCPPLVVHPPVSKFLLNGADVMLPGVVVRDLASVDYVMGERRCVMSSGNPEPYAVGEMIKDREGVVHGGMTGKGMKVVHCYLDYLWQMGSQTLPNEGFRPDGVYRLPSAGTPISNQEELVDDGEVADDWEDLSDPAAXXXXXXXXXXXXXXXXKPAAAVEGLGLDGVSLEDPMGEGEEQEQEAV--------------------EVVSERLYAAFLNGLKKSLKDAQLPMLVSTFYSSVLLPSRPPGTSIDVKKTSYRKISNFLQEMEGRGLVTLEVTKGVQSLVGVNRAHPDLRAFKATTVTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGDGETSLKAFELFKLSHNIKKMLGSDAASARGKFGEYLTPAEARDVLFGYIRAEGLDHPTNKSLVVLNGPLCDNLYKPMNKKAARVEYPTEAKKAELPRRFLDRLQLHHAILLPGNPHPFVGRGGIPSVSIEVEKRQGNRHATKVRGLEAYGIDPSTLGRQVQKRFACSTAAQPAPGTNGKYQELMLQGHLASELEDLLSEEMGIPRRFLTTGFSKGAKPRKAR 712
BLAST of mRNA_P-littoralis_Contig129.72.2 vs. uniprot
Match: A0A6H5KXV9_9PHAE (SUI1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXV9_9PHAE) HSP 1 Score: 739 bits (1909), Expect = 1.020e-261 Identity = 425/536 (79.29%), Postives = 445/536 (83.02%), Query Frame = 1
Query: 499 MLPGVVVKDLASVDYVMGERRCVMSSGNPEPYAVGEMIKDKQAVIYGGMSGKGLKVVHCYLDFLWQMGPQTLPNEGFRPDGVYRLPSASTAAPDQEELVD--EVTDDWEYLSDAAXXXXXXXXXXXXXXX-------TAGGLSLEGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVVSERLVAAFLNGLKKTLKDAQLPMLVSTFYSSVLLPSRPPGTSIDVKKTRYRKISNFLKEMEERGLVTLKVTKGVQSLVAVDRAHPELRAFKATTVTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSETTMKAFELYKLSHNIKKMLGSDAASVAGKHGEYLTPAEARDVLFGYIKAEGLGHPTNKSLVVLNGPLCDNLYKPMNKKAPRVDYPTEAKKAELPRRFLDRLQLHHAILLPGNAHPFVGRGGIPSVSIDVEKRQGNRHATKVRGLEAYGIDPAAFGRQVQKRFACSTAAQPAPGTNGKYQELMLQGHLATELEDLLSEEMGIPRRFLTTGFSKGAKPRKAR 2079
MLPGVVV+DLASVDYV+GERRCVMSSGNPEPYAVGEMIKD++ V++GGM GKGLKVVHCYLDFLWQMGPQTLPNEGFRPDGVYRLPSA QEELVD EV DDWE LS A XXXXXXXXXXXXX A LEGV EVVSERL AAFLNGLKK LKDAQLPMLVSTFYSSVLLPSRPPGTSIDVKKT YRKISNFL+EME RGLVTLKVTKGVQSLV V+RAHP+LRAFKAT+VTA XXXXXXXXXXXXXXXX D ET++KAFEL+KLSHNIKKMLGSDAASV GK GEYLTPAEARDVLFGYI+AEGL HPT+KSLVVLNGPLCDNLYKP+NKKA RV+YPTEAKKAELPRRFLDRLQLHHAILLPGN HPFVGRGGIPSVSI+VEKRQGNRHATKVRGLEAYGIDP+ GRQVQKRFACSTAAQPAPGTNGKYQELMLQGHLA+ELEDLLSEEMGIPRRFLTTGFSKGAKPRKAR
Sbjct: 1 MLPGVVVRDLASVDYVLGERRCVMSSGNPEPYAVGEMIKDREGVVHGGMIGKGLKVVHCYLDFLWQMGPQTLPNEGFRPDGVYRLPSAGAQISGQEELVDDGEVADDWEDLSHPAAAXXXXXXXXXXXXXXXXXEKLAAAVEGLEGVSLEDAGGEGEEQEEEAV--------------------EVVSERLYAAFLNGLKKGLKDAQLPMLVSTFYSSVLLPSRPPGTSIDVKKTSYRKISNFLQEMEGRGLVTLKVTKGVQSLVGVNRAHPDLRAFKATSVTAAAQAAADAAEXXXXXXXXXXXXXXXXAAGDGETSLKAFELFKLSHNIKKMLGSDAASVRGKFGEYLTPAEARDVLFGYIRAEGLDHPTDKSLVVLNGPLCDNLYKPVNKKAARVEYPTEAKKAELPRRFLDRLQLHHAILLPGNPHPFVGRGGIPSVSIEVEKRQGNRHATKVRGLEAYGIDPSTLGRQVQKRFACSTAAQPAPGTNGKYQELMLQGHLASELEDLLSEEMGIPRRFLTTGFSKGAKPRKAR 516
BLAST of mRNA_P-littoralis_Contig129.72.2 vs. uniprot
Match: R0IAX6_9BRAS (SUI1 domain-containing protein (Fragment) n=5 Tax=Camelineae TaxID=980083 RepID=R0IAX6_9BRAS) HSP 1 Score: 261 bits (666), Expect = 4.630e-74 Identity = 200/670 (29.85%), Postives = 302/670 (45.07%), Query Frame = 1
Query: 43 ARTMFRKKQDVAERSRSLLKNSAAKKIKTEILAALPTLSKDVIDELMPNKDGIEVVKLATRALVYFHVPTKTPMFFDSDGRNN-LFPTVYALWRAQQVLSASSPEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVVHPPVSKFVLNGADVMLPGVVVKDLASVDYVMGERRCVMSSGNPEPYAVGEMIKDKQAVIYGGMSGKGLKVVHCYLDFLWQMGP-QTLPNEGFRPDGVYRLPSASTAAPDQEELVDEVTDDWEYLSDAAXXXXXXXXXXXXXXXTAGGLSLEGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVVSERLVAAFLNGLKKTLKDAQLPMLVSTFYSSVLLPSRPPGTSIDVKKTRYRKISNFLKEMEERGLVTLKVTKGVQS--LVAVDRAHPELRAFKATTVTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSETTMKAFELYKLS-HNIKKMLGSDAASVAGKHGEYLTPAEARDVLFGYIKAEGLGHPTNKSLVVLNGPLCDNLYKPMNKKAPRVDYPTEAKKAELPRRFLDRLQLHHAILLPGNAHPFVGRGGIPSVSIDVEKRQGNRHATKVRGLEAYGIDPAAFGRQVQKRFACSTAAQPAPGTNGKYQELMLQGHLATELEDLLSEEMGIPRRFL 2037
A MF+K V +S L + KK++ + LP L+ +++D ++P K I + K R VY + PMFFD DGR +FPTV+ALW A ++L + ++ VS++VL GAD+M PG+++ + GE V GN P AVG + + G+ GK L++ H Y DFLW+ +PN GF + V PS + V+E+TD S A G + E V L L L TLK+ LP+ ST +++ +LP RP G ++D+KK+ ++K+S +L+ G++++K K + L++V+R+HP+ ++FK A SE ++ E+YK S HN ASV G T +EA DV+F YI+ E L P NKS+VVL+ LCD L+K KK YP+E K ++ F+ R+Q HH +++ G P V +G I V I E+RQGN+ TKV G+E + IDP +FG ++QK+FACST+ PG G E+++QG + L L E G+P+R++
Sbjct: 25 ANRMFKKA--VEAKSHQRLSGADRKKLRRTVRNRLPLLTDELLDVILPPKVEITLSKFQNRVHVY-SIEGGCPMFFDIDGRGTEIFPTVFALWEAPEMLPS----------------------------------FMLKGGEVSRYVLGGADLMFPGILIPPQGYPSFSAGEIWAVKVPGNQAPIAVGCTTMSSEEALKAGLHGKALRITHYYRDFLWESAEGHYVPNAGFMENVVMEDPSYLASG-----SVEEITD-----SSAGPQTGTELEDESGDVNNIGPSTSVTDSKNDTEEHVVGSMNELNLTDDVSANEANTDKQNIFSPEEVDALLDQCLLQALHTTLKEKDLPIPGSTLWANHVLPCRPSGLTLDIKKSSHKKLSKWLQSKASTGMISVKEDKHKKEIVLISVNRSHPDYKSFKPEKKKAEVSESPGERSTLQA---------------QSEKMLEIIEVYKPSIHN-----SGIFASVGEDKGNLYTASEATDVVFRYIEKENLVKPINKSMVVLDAILCDALFKGAIKKGSA--YPSEIHKKDVGSTFVGRMQPHH-VVMRGGGEPVVRKGAIKPVQIMTERRQGNKKVTKVTGMETFLIDPDSFGSELQKKFACSTSVGELPGKKGY--EVLIQGGVIDNLAKYLVEHYGVPKRYI 622
BLAST of mRNA_P-littoralis_Contig129.72.2 vs. uniprot
Match: A0A5N6PAA2_9ASTR (SUI1 domain-containing protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6PAA2_9ASTR) HSP 1 Score: 259 bits (663), Expect = 6.660e-74 Identity = 197/662 (29.76%), Postives = 295/662 (44.56%), Query Frame = 1
Query: 64 KQDVAERSRSLLKNSAAKKIKTEILAALPTLSKDVIDELMPNKDGIEVVKLATRALVYFHVPTKTPMFFDSDGRNN-LFPTVYALWRAQQVLSASSPEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVVHPPVSKFVLNGADVMLPGVVVKDLASVDYVMGERRCVMSSGNPEPYAVGEMIKDKQAVIYGGMSGKGLKVVHCYLDFLWQMGPQT-LPNEGFRPDGVYRLPSASTAAPDQEELVDEVTDDWEYLSDAAXXXXXXXXXXXXXXXTAGGLSLEGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVVSERLVAAFLNGLKKTLKDAQLPMLVSTFYSSVLLPSRPPGTSIDVKKTRYRKISNFLKEMEERGLVTLKVTKGVQSLV--AVDRAHPELRAFKATTVTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSETTMKAFELYKLSHNIKKMLGSDAASVAGKHGEYLTPAEARDVLFGYIKAEGLGHPTNKSLVVLNGPLCDNLYKPMNKKAPRVDYPTEAKKAELPRRFLDRLQLHHAILLPGNAHPFVGRGGIPSVSIDVEKRQGNRHATKVRGLEAYGIDPAAFGRQVQKRFACSTAAQPAPGTNGKYQELMLQGHLATELEDLLSEEMGIPRRFL 2037
K+ + +S+ L + KK+K I P S +D L+PNK I V K RAL+Y + PMFFD DGR +FPTVYALW+ +L A ++ VS++V+ GAD+M PG+ + + D++ GE V+ GNP P AVG + G+ GK LK+ H Y D LW+ +PN GF D V+ PS T + + EVT+D E +DA T L+ E V L L T+K+ LP+ ST +S+ +LPSRPPGT +D+KK+ ++K+S +L+ GL++ K K + ++ +++R HP +FK M+ E+YK S ++ + S A + + T +EA +V F YI+ E L PTNKS+VVL+ LCD L+K KK YP+E K +L F+ R+Q HH + V +GG+ + I E+RQGN+ TKV G+E + ID ++QK+FACST+ PG G E+++QG + +L L E+ GIP++++
Sbjct: 3 KKSLEAKSQQRLSGADRKKLKRTIKERFPNASDTDLDILIPNKVEITVSKQPNRALIY-SLEGGLPMFFDVDGRGTTIFPTVYALWKVPHLLPA----------------------------------FILKGGEVSRYVIGGADLMFPGISINAVGLPDFLAGESWAVVVPGNPAPIAVGSTCMSSSEALKAGLRGKALKISHHYRDALWESAEDRYVPNAGFLDDVVFEDPSLPTTSQQSDT---EVTNDHE--NDADNKGSEVVLNDMDASQTDSSSRLQS-----NPNLEEQVTTDIGDLKVTESDKGVTEDQISVSVEDVDALLDKCLLQAFYTTVKEKDLPIAGSTLWSNHVLPSRPPGTMLDIKKSSHKKLSKWLQSKSSEGLISSKEDKHKKEVMVLSINRKHPSYTSFKPEKQQTENKEQTVECINEPVINGL----------------MEVIEIYKPSVHVNPIFTSLGADIRLLY----TQSEASEVAFAYIEKENLVKPTNKSIVVLDAMLCDALFKGAIKKG--STYPSEIHKKDLAPTFISRMQPHHQVTR--GKETIVKKGGLKPMQIMTERRQGNKKVTKVSGMEPFLIDAEPLASELQKKFACSTSVTELPGKKGH--EVLVQGGVIDDLARYLVEQYGIPKKYI 593
BLAST of mRNA_P-littoralis_Contig129.72.2 vs. uniprot
Match: A0A2P6PKI4_ROSCH (Putative SUI1 domain, SWIB/MDM2 domain, PUA-like domain-containing protein n=3 Tax=Rosoideae TaxID=171638 RepID=A0A2P6PKI4_ROSCH) HSP 1 Score: 257 bits (656), Expect = 8.470e-73 Identity = 200/665 (30.08%), Postives = 298/665 (44.81%), Query Frame = 1
Query: 64 KQDVAERSRSLLKNSAAKKIKTEILAALPTLSKDVIDELMPNKDGIEVVKLATRALVYFHVPTKTPMFFDSDGRNN-LFPTVYALWRAQQVLSASSPEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVVHPPVSKFVLNGADVMLPGVVVKDLASVDYVMGERRCVMSSGNPEPYAVGEMIKDKQAVIYGGMSGKGLKVVHCYLDFLWQM--GPQTLPNEGFRPDGVYRLPSASTA--APDQEELVDEVTDDWEYLSDAAXXXXXXXXXXXXXXXTAGGLSLEGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVVSERLVAAFLNGLKKTLKDAQLPMLVSTFYSSVLLPSRPPGTSIDVKKTRYRKISNFLKEMEERGLVTLKVTKGVQS--LVAVDRAHPELRAFKATTVTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSETTMKAFELYKLSHNIKKMLGSDAASVAGKHGEYLTPAEARDVLFGYIKAEGLGHPTNKSLVVLNGPLCDNLYKPMNKKAPRVDYPTEAKKAELPRRFLDRLQLHHAILLPGNAHPFVGRGGIPSVSIDVEKRQGNRHATKVRGLEAYGIDPAAFGRQVQKRFACSTAAQPAPGTNGKYQELMLQGHLATELEDLLSEEMGIPRRFL 2037
K+ V RS L + KK+K + P S ID L+P K I+V K R LVY + PMFFD DGR +FPTVYALW+ +L + ++ VS++V+ GAD+M PG+ + ++ GE V GNP P AVG + G+ GK LK+ H Y D LW+ GP +PN GF D V+ P+ S+A + D D + D +A ++ E V L L L T+KD LPM ST +S+ +LP RP G ++D+KK+ ++K+S +L+ GL+ +K K + L+++DR+HP+ +FK S ++ E+YK S ++ + ASV GE + ++A D++F Y++ E L PT+KS+V+L+ LCD L+K KK YPTE K +L F++R+Q HH I+ GN V +GG+ +V I E+RQGN+ TK+ GLE + +DP A ++QK+FACST PG G E+++QG + L L E+ GIP+R++
Sbjct: 3 KKGVEARSHQRLSGADRKKLKRTVKERFPRASDADIDALLPPKVEIKVSKYQNRVLVY-GIEGGFPMFFDIDGRGKEIFPTVYALWKVPDLLPS----------------------------------FMLKGGEVSRYVIGGADLMFPGISIPAEGLPSFMAGEAWAVKVPGNPAPIAVGTTTMSCSEALKAGLRGKALKIAHYYGDLLWESVEGPY-VPNAGFLEDAVFEDPTLSSAQISYSYNGANDGSHDQLNGIDDKEMGQHVDVADVQSEPSSASVAPID--VRNEIAEEVTANVGDLKLTDDDSANQSTGEVQHPLSAEDVDMLLEKCLLQALHTTVKDKDLPMPGSTLWSNYVLPCRPSGITLDIKKSSHKKLSKWLQAKCSTGLIRVKEDKYKKESVLLSIDRSHPDYSSFKPEKRQVEEAVQTSVPAVSESR---------------SVKILEVAEIYKPSVHVNPVF----ASVGADTGELYSASDATDIVFKYVEKENLVKPTDKSIVILDAILCDALFKGAIKKG--STYPTEIHKRDLGAAFVNRMQAHH-IVTRGN-DSVVRKGGLKTVQIMTERRQGNKKMTKLSGLETFLVDPEALASELQKKFACSTTVAELPGKKGL--EVLVQGGVIENLAKHLIEQYGIPKRYI 604
BLAST of mRNA_P-littoralis_Contig129.72.2 vs. uniprot
Match: A0A6P3ZGG9_ZIZJJ (eukaryotic translation initiation factor 2D n=2 Tax=Ziziphus jujuba TaxID=326968 RepID=A0A6P3ZGG9_ZIZJJ) HSP 1 Score: 256 bits (655), Expect = 1.130e-72 Identity = 209/675 (30.96%), Postives = 310/675 (45.93%), Query Frame = 1
Query: 64 KQDVAERSRSLLKNSAAKKIKTEILAALPTLSKDVIDELMPNKDGIEVVKLATRALVYFHVPTKTPMFFDSDGRNN-LFPTVYALWRAQQVLSASSPEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVVHPPVSKFVLNGADVMLPGVVVKDLASVDYVMGERRCVMSSGNPEPYAVGEMIKDKQAVIYGGMSGKGLKVVHCYLDFLWQ-MGPQTLPNEGFRPDGVYRLPSAST------------AAPDQEELVD-EVTDDWEYLSDAAXXXXXXXXXXXXXXXTAGGLSLEGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVVSERLVAAFLNGLKKTLKDAQLPMLVSTFYSSVLLPSRPPGTSIDVKKTRYRKISNFLKEMEERGLVTLKVTKGVQSLV--AVDRAHPELRAFKATTVTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSETTMKAFELYKLSHNIKKMLGSDAASVAGKHGEYLTPAEARDVLFGYIKAEGLGHPTNKSLVVLNGPLCDNLYKPMNKKAPRVDYPTEAKKAELPRRFLDRLQLHHAILLPGNAHPFVGRGGIPSVSIDVEKRQGNRHATKVRGLEAYGIDPAAFGRQVQKRFACSTAAQPAPGTNGKYQELMLQGHLATELEDLLSEEMGIPRRFL 2037
K+ V +S L + KK+K I P S ID L+P K I V KL R VY V PMFFD DGR N +FPTVYALW+ +L L+ VS++V+ GAD+M PG+ V + GE V GNP P AVG + G+ GK LK+ H Y D LW+ + +PN GF D V+ P+ S+ ++ +Q+ +D EV + D + TA ++ XXXXXXXXX E V L L L T+K+ LPM ST +S+ +LP RP GT++D+KK+ Y+K+S +L+ GLVT+K K + V +V+R HP+ +FK S ++ E+YK S ++ + ++V + G+ + +EA D++F Y++ E L PTNK++VVL+ LCD L+K KK YPTE K ++ F++R+Q HH + G + V +G + S+ I E+RQGN+ TK+ G+E + +DP A ++QK+FACST+ PG G E+++QG + +L + E+ GIP+R +
Sbjct: 3 KKAVEAKSHQRLSGADRKKLKRSIKDKFPRASDTDIDSLLPPKAEITVAKLQNRVHVY-GVEGGFPMFFDVDGRGNEIFPTVYALWKVPDILP----------------------------------YFLLKGGEVSRYVIGGADLMFPGISVPVEGLPSFSAGELWAVKVPGNPAPIAVGSTTMSSTEALKAGLRGKALKIAHYYGDVLWESVEGHYVPNAGFFEDAVFEDPTLSSCQTSDSCNDANDSSHNQDVNIDKEVGGSVDVADDHSVPNSASITQIDAGNDTAEEITSS--------------VADLKVXXXXXXXXXGAEDQHPLSTEDVDMLLDKCLLQALHTTVKEKDLPMPGSTLWSNHVLPCRPSGTTLDIKKSSYKKLSKWLQAKASAGLVTVKEDKYKKEAVLFSVNRNHPDYSSFKPEKRRVESEHTSDHAGSESR----------------SNKVLELAEVYKPSVHVNPIF----SAVGAETGKLYSASEATDIVFKYVEKENLVKPTNKAIVVLDATLCDALFKGAIKKG--TTYPTEVHKKDIGSTFINRMQAHHIVTRGGES--VVRKGALKSLQIMTERRQGNKKVTKLSGMETFLVDPEALASELQKKFACSTSVGELPGKKGH--EVLVQGGVIDDLAKHMIEQYGIPKRCI 602
BLAST of mRNA_P-littoralis_Contig129.72.2 vs. uniprot
Match: M4DI19_BRARP (SUI1 domain-containing protein n=1 Tax=Brassica rapa subsp. pekinensis TaxID=51351 RepID=M4DI19_BRARP) HSP 1 Score: 255 bits (652), Expect = 2.480e-72 Identity = 198/667 (29.69%), Postives = 302/667 (45.28%), Query Frame = 1
Query: 52 MFRKKQDVAERSRSLLKNSAAKKIKTEILAALPTLSKDVIDELMPNKDGIEVVKLATRALVYFHVPTKTPMFFDSDGRNN-LFPTVYALWRAQQVLSASSPEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVVHPPVSKFVLNGADVMLPGVVVKDLASVDYVMGERRCVMSSGNPEPYAVGEMIKDKQAVIYGGMSGKGLKVVHCYLDFLWQMGP-QTLPNEGFRPDGVYRLPSASTAAPDQEELVDEVTDDWEYLSDAAXXXXXXXXXXXXXXXTAGGLSLEGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVVSERLVAAFLNGLKKTLKDAQLPMLVSTFYSSVLLPSRPPGTSIDVKKTRYRKISNFLKEMEERGLVTLKVTKGVQS--LVAVDRAHPELRAFKATTVTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSETTMKAFELYKLS-HNIKKMLGSDAASVAGKHGEYLTPAEARDVLFGYIKAEGLGHPTNKSLVVLNGPLCDNLYKPMNKKAPRVDYPTEAKKAELPRRFLDRLQLHHAILLPGNAHPFVGRGGIPSVSIDVEKRQGNRHATKVRGLEAYGIDPAAFGRQVQKRFACSTAAQPAPGTNGKYQELMLQGHLATELEDLLSEEMGIPRRFL 2037
MF+K D R L + KK++ + L+ +++D ++P K I V K R LVY + PMFFD DGR N + PTV+ALW A +L + ++ VS++VL GAD+M PG+++ + GE V GN P AVG + + G+ GK L++ H Y DFLW+ +PN GF D V P A A+ EE+ D + A TA + + E V L L L TLK+ LP+ ST +++ +LP RPPG ++D+KK+ ++K+S +L+ G++T+K K + L++V+R HP+ FK A S+ ++ E+YK S HN + AS+ G+ T +EA DV+F YI+ E L PTNKS+VVL+ LCD L+K KK YP+E K ++ F+ R+Q H +++ G P V +GGI V I +E+RQGN+ TKV G+E + +DP +FG ++QK+FACST+ PG G E+++QG + ++ + E G+P+R++
Sbjct: 1 MFKKAVDAKSHQR--LSGADRKKLRRTVQNRFTLLTDELLDAILPPKVEITVSKFQNRVLVY-SIEGGCPMFFDIDGRGNEILPTVFALWEAPAMLPS----------------------------------FMLKGGEVSRYVLGGADLMFPGILIPPEGFPSFSAGEIWSVKVPGNAAPIAVGFTTMSSEEGLKAGLRGKALRIAHYYRDFLWESAEGHYVPNAGFWEDVVMEDP-AFLASGSGEEISDAL---------AGQQTSTGNEEDESALETASTSATDA--KNGTEEDIVGSMNEVNLGDDVSANEANTEKQNPLSTEEVDALLDQCLLQALHTTLKEKDLPIPGSTLWANHVLPCRPPGITLDIKKSSHKKLSKWLQSKASAGMITVKEDKHKKEIVLISVNRRHPDYSTFKPEKKKAEVSESSVSSSTAKP---------------QSDKMLEIIEVYKPSIHN-----SAIFASLGEDKGKLYTASEAADVVFKYIEKENLVKPTNKSMVVLDPILCDALFKGAIKKGSA--YPSEIHKKDVGSTFIGRMQPHQ-VVMRGGCEPVVRKGGIKPVQIMMERRQGNKKVTKVSGIETFLMDPDSFGSELQKKFACSTSVNELPGKKGY--EVLIQGGVIEDVARYMVEHYGVPKRYI 593
BLAST of mRNA_P-littoralis_Contig129.72.2 vs. uniprot
Match: A0A0D3CZU0_BRAOL (SUI1 domain-containing protein n=10 Tax=Brassicaceae TaxID=3700 RepID=A0A0D3CZU0_BRAOL) HSP 1 Score: 255 bits (651), Expect = 3.450e-72 Identity = 196/663 (29.56%), Postives = 301/663 (45.40%), Query Frame = 1
Query: 64 KQDVAERSRSLLKNSAAKKIKTEILAALPTLSKDVIDELMPNKDGIEVVKLATRALVYFHVPTKTPMFFDSDGRNN-LFPTVYALWRAQQVLSASSPEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVVHPPVSKFVLNGADVMLPGVVVKDLASVDYVMGERRCVMSSGNPEPYAVGEMIKDKQAVIYGGMSGKGLKVVHCYLDFLWQMGP-QTLPNEGFRPDGVYRLPSASTAAPDQEELVDEVTDDWEYLSDAAXXXXXXXXXXXXXXXTAGGLSLEGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVVSERLVAAFLNGLKKTLKDAQLPMLVSTFYSSVLLPSRPPGTSIDVKKTRYRKISNFLKEMEERGLVTLKVTKGVQS--LVAVDRAHPELRAFKATTVTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSETTMKAFELYKLS-HNIKKMLGSDAASVAGKHGEYLTPAEARDVLFGYIKAEGLGHPTNKSLVVLNGPLCDNLYKPMNKKAPRVDYPTEAKKAELPRRFLDRLQLHHAILLPGNAHPFVGRGGIPSVSIDVEKRQGNRHATKVRGLEAYGIDPAAFGRQVQKRFACSTAAQPAPGTNGKYQELMLQGHLATELEDLLSEEMGIPRRFL 2037
K+ V +S L + KK++ + L+ +++D ++P K I V K R LVY + PMFFD DGR N + PTV+ALW A ++L + ++ VS++VL GAD+M PG+++ + GE V GN P AVG I G+ GK L++ H Y DFLW+ +PN GF D V P A A+ EE+ D + A TA + + E V L L L TLK+ LP+ ST +++ +LP RPPG ++D+KK+ ++K+S +L+ G++T+K K + L++V+R HP+ +FK + S+ ++ E+YK S HN + AS+ G+ T +EA DV+F YI+ E L PTNKS+VVL+ LCD L+K KK YP+E K ++ F+ R+Q H +++ G P V +GGI V I E+RQGN+ TKV G+E + +DP +FG ++QK+FACST+ PG G E+++QG + ++ + E G+P+R++
Sbjct: 3 KKAVEAKSHQRLSGADRKKLRRTVQNRFSLLTDELLDAILPPKVEITVSKFQNRVLVY-SIEGGCPMFFDIDGRGNEILPTVFALWEAPEMLPS----------------------------------FMLKGGEVSRYVLGGADLMFPGILIPPEGFPSFSAGEIWSVKVPGNAAPIAVGFTTMSSAEGIKAGLRGKALRIAHYYRDFLWESAEGHYVPNAGFWEDVVMEDP-AFLASGSGEEISD---------ASAGQQTSTGNEEDASALETASTSATDA--KNGTEEDIVGSMNEVNLGDDVSANEANTEKQNPLSTEEVDALLDQCLLQALHTTLKEKDLPIPGSTLWANHVLPCRPPGITLDIKKSSHKKLSKWLQSKASAGMITVKEDKHKKEIVLISVNRRHPDYSSFKPEKKKSEISESSVASSTAQA---------------QSDKMLEIIEVYKPSIHN-----SAIFASLGEDKGKLYTASEASDVVFKYIEKENLVKPTNKSMVVLDPILCDALFKGAIKKGSA--YPSEIHKKDVGSTFIGRMQPHQ-VVMRGGCEPVVRKGGIKPVQIMTERRQGNKKVTKVSGIETFLMDPDSFGSELQKKFACSTSVNELPGKKGY--EVLIQGGVIKDVARYMVEHYGVPKRYI 593
BLAST of mRNA_P-littoralis_Contig129.72.2 vs. uniprot
Match: UPI001929DFF7 (LOW QUALITY PROTEIN: eukaryotic translation initiation factor 2D n=1 Tax=Dioscorea cayennensis subsp. rotundata TaxID=55577 RepID=UPI001929DFF7) HSP 1 Score: 254 bits (650), Expect = 5.500e-72 Identity = 197/669 (29.45%), Postives = 304/669 (45.44%), Query Frame = 1
Query: 52 MFRKKQDVAERSRSLLKNSAAKKIKTEILAALPTLSKDVIDELMPNKDGIEVVKLATRALVYFHVPTKTPMFFDSDGRNN-LFPTVYALWRAQQVLSASSPEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVVHPPVSKFVLNGADVMLPGVVVKDLASVDYVMGERRCVMSSGNPEPYAVGEMIKDKQAVIYGGMSGKGLKVVHCYLDFLWQ-MGPQTLPNEGFRPDGVYRLPSASTAAPDQEELVDEVTDDWEYLS---DAAXXXXXXXXXXXXXXXTAGGLSLEGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVVSERLVAAFLNGLKKTLKDAQLPMLVSTFYSSVLLPSRPPGTSIDVKKTRYRKISNFLKEMEERGLVTLKVTKGVQSLV--AVDRAHPELRAFKATTVTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSETTMKAFELYKLSHNIKKMLGSDAASVAGKHGEYLTPAEARDVLFGYIKAEGLGHPTNKSLVVLNGPLCDNLYKPMNKKAPRVDYPTEAKKAELPRRFLDRLQLHHAILLPGNAHPFVGRGGIPSVSIDVEKRQGNRHATKVRGLEAYGIDPAAFGRQVQKRFACSTAAQPAPGTNGKYQELMLQGHLATELEDLLSEEMGIPRRFL 2037
MF+K DV R L + KK++ + P S +D ++P K I + K RA VY + P+FFD DGR + ++PTVYALW+A ++L L+ VS+FV+ GAD+M PG+ + ++ G+ V GNP P AVG Q + G+ GK L++ H Y D LW+ + +PN GF D V P+ +A P Q +L +D Y++ D T+ + V E V L L L +++KD LPM ST +S+ +LP RP G ++D+KK+ ++K+S +L GL++ K K + +V A++R HP+ +FK + S + + E+YK S ++ +L SV G+Y + +EA D++F Y++ E L PT+K++VVLN LCD LYK KK YPTE K +L FL+R+Q+H+ + A V +G + V I E+RQGN+ TKV GLEA+ +D ++QK+FACST+ PG G+Y E+++QG + +L L + G+P+R++
Sbjct: 1 MFKKSFDVKSHQR--LSGADKKKLRRTVKDKFPHASDADLDLILPPKAEIVLAKYPNRAHVY-SIEGGFPIFFDVDGRGSEIYPTVYALWKAPELLPC----------------------------------FLLKGGEVSRFVIGGADLMFPGISIPPEGLPSFLAGQPWAVKVPGNPAPIAVGSTTMSSQDALKAGLRGKALRITHYYRDSLWESVDVCYVPNGGFLDDVVIEDPALVSAMP-QNDL-----NDTHYVTVKEDEGDLHDVSEANADVVIDTSASADMPNVSEEIATDMSGLHVTENAAGEEPGVEKETTSLSS----EDVDSLLDKCLLQALHRSVKDKDLPMPGSTLWSNHVLPCRPSGITLDIKKSSHKKLSKWLLSKSSAGLISAKEDKYKKEIVLLAINRTHPDYTSFKPEKRSTETIEPKHETSSSEGLR--------------SRSLFEVVEIYKSSSHVNPIL----TSVGADTGKYFSASEAIDIVFRYVENENLVKPTDKAIVVLNAILCDALYKGTIKKG--SSYPTEIHKRDLGVTFLNRMQVHYRVSRGNEA--VVRKGVVKPVQIMSERRQGNKKVTKVSGLEAFLMDAELLASELQKKFACSTSVAELPGKKGQY-EVLVQGGVIEDLAKHLMDHYGVPKRYI 599
BLAST of mRNA_P-littoralis_Contig129.72.2 vs. uniprot
Match: A0A1J3F1X5_NOCCA (Eukaryotic translation initiation factor 2D n=3 Tax=Brassicaceae TaxID=3700 RepID=A0A1J3F1X5_NOCCA) HSP 1 Score: 253 bits (647), Expect = 1.240e-71 Identity = 193/667 (28.94%), Postives = 298/667 (44.68%), Query Frame = 1
Query: 64 KQDVAERSRSLLKNSAAKKIKTEILAALPTLSKDVIDELMPNKDGIEVVKLATRALVYFHVPTKTPMFFDSDGRNN-LFPTVYALWRAQQVLSASSPEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVVHPPVSKFVLNGADVMLPGVVVKDLASVDYVMGERRCVMSSGNPEPYAVGEMIKDKQAVIYGGMSGKGLKVVHCYLDFLWQMGP-QTLPNEGFRPDGVYRLPS----ASTAAPDQEELVDEVTDDWEYLSDAAXXXXXXXXXXXXXXXTAGGLSLEGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVVSERLVAAFLNGLKKTLKDAQLPMLVSTFYSSVLLPSRPPGTSIDVKKTRYRKISNFLKEMEERGLVTLKVTKGVQS--LVAVDRAHPELRAFKATTVTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSETTMKAFELYKLS-HNIKKMLGSDAASVAGKHGEYLTPAEARDVLFGYIKAEGLGHPTNKSLVVLNGPLCDNLYKPMNKKAPRVDYPTEAKKAELPRRFLDRLQLHHAILLPGNAHPFVGRGGIPSVSIDVEKRQGNRHATKVRGLEAYGIDPAAFGRQVQKRFACSTAAQPAPGTNGKYQELMLQGHLATELEDLLSEEMGIPRRFL 2037
K+ V +S L + KK++ + L+ D++D ++P K I V K R LVY + PMFFD DGR N +FPTV+ALW A ++L + ++ VS++V+ GAD+M PG+ + + GE V GN P AVG + G+ GK L++ H Y DFLW+ +PN GF D V PS S A+ + D+ ++D G ++ E V L L L TLK+ LP+ ST +++ +LP RPPG ++D+KK+ ++K+S +L+ G++ +K K + L++V+R HP +FK A S+ ++ E+YK S HN + ASV G T +EA DV+F YI+ E L PTN+S+VVL+ LCD L+K KK YP+E K ++ F+ R+Q +H +++ G P V +G + V I E+RQGN+ TKV G+E + IDP +FG ++QK+FACST+ PG G E+++QG + ++ + E G+P+R++
Sbjct: 3 KKAVEAKSHQRLSGADRKKLRRTVQNRFILLTDDLLDSILPPKVEITVSKFQNRVLVY-SIEGGCPMFFDIDGRGNEIFPTVFALWEAPEMLPS----------------------------------FMLKGGEVSRYVIGGADLMFPGIWIPAEGFPSFSAGEIWAVKVPGNLAPIAVGFTTMSSAEALKAGLRGKALRITHYYRDFLWESAEGHYVPNAGFMEDVVMEDPSYLVEISDASAGPQTSTGNEEDESADVNDTGPSTSHTDAKNDTEEHVVGSMN------------------ELNLGDDVSANEANNDKQNTLSPEEVDALLDQCLLQALHTTLKEKDLPIPGSTLWANHVLPCRPPGLTLDIKKSSHKKLSKWLQSKASTGMIAVKEDKHKKEIVLISVNRKHPNYSSFKPEKKKAEISESSGERSTAQA---------------QSDKMLEIVEVYKPSIHN-----SAIFASVGEDKGRLYTASEASDVVFKYIEKENLVKPTNRSMVVLDPILCDALFKGAIKKGSA--YPSEIHKKDVGSTFVGRMQPNH-VVMRGGGEPVVRKGAVKPVQIMTERRQGNKKVTKVSGIETFLIDPDSFGSELQKKFACSTSVGELPGKKGY--EVLIQGGVIDDVARYMVEHYGVPKRYI 591 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig129.72.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig129.72.2 >prot_P-littoralis_Contig129.72.2 ID=prot_P-littoralis_Contig129.72.2|Name=mRNA_P-littoralis_Contig129.72.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=677bp MFRKKQDVAERSRSLLKNSAAKKIKTEILAALPTLSKDVIDELMPNKDGIback to top mRNA from alignment at P-littoralis_Contig129:241036..249060+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig129.72.2 ID=mRNA_P-littoralis_Contig129.72.2|Name=mRNA_P-littoralis_Contig129.72.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=8025bp|location=Sequence derived from alignment at P-littoralis_Contig129:241036..249060+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig129:241036..249060+ >mRNA_P-littoralis_Contig129.72.2 ID=mRNA_P-littoralis_Contig129.72.2|Name=mRNA_P-littoralis_Contig129.72.2|organism=Pylaiella littoralis U1_48|type=CDS|length=2031bp|location=Sequence derived from alignment at P-littoralis_Contig129:241036..249060+ (Pylaiella littoralis U1_48)back to top |