mRNA_P-littoralis_Contig129.34.2 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig129.34.2 vs. uniprot
Match: D8LK78_ECTSI (Ubiquinol cytochrome c reductase subunit QCR7 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LK78_ECTSI) HSP 1 Score: 201 bits (512), Expect = 7.060e-61 Identity = 106/113 (93.81%), Postives = 111/113 (98.23%), Query Frame = 1
Query: 1 MAKLLKKAGDFVLDVAAQQYKRSMTRKLNAFGLKFDDLMIEENEDVAEAVRRLTPEQQLARKRRQFRAFDISLKKTPLPDHIQAVQEPFEPYLQDIIKEVREERLERELLNKR 339
MA++LKKAGDFVLDVAA QYKRSMTRKLNAFGLKFDDLMIEE+ DVAEAVRRLTPEQQLARKRRQFRAFDISLKKTPLPDHIQAVQ+PFEPYLQDIIKEVREERLERELLN+R
Sbjct: 1 MARVLKKAGDFVLDVAATQYKRSMTRKLNAFGLKFDDLMIEEDPDVAEAVRRLTPEQQLARKRRQFRAFDISLKKTPLPDHIQAVQDPFEPYLQDIIKEVREERLERELLNQR 113
BLAST of mRNA_P-littoralis_Contig129.34.2 vs. uniprot
Match: A0A7S2GXC5_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GXC5_9STRA) HSP 1 Score: 83.6 bits (205), Expect = 5.210e-16 Identity = 49/107 (45.79%), Postives = 67/107 (62.62%), Query Frame = 1
Query: 13 LKKAGDFVLDVAAQQYKRSMTRKLNAFGLKFDDLMIEENEDVAEAVRRLTPEQQLARKRRQFRAFDISLKKTPLPDHIQAVQEPFEPYLQDIIKEVREERLERELLN 333
L+ G +V A Y+ + ++LN +GLK++D++ E DV +AV RL P+ Q +R RR RA DIS KK PLP IQ P +PY+ ++ E RE RLERELLN
Sbjct: 3 LEMVGKRAWNVLAGGYQTMVIQRLNQYGLKYNDILNEALPDVQKAVSRLDPDMQQSRDRRIKRALDISFKKKPLPMDIQKKLFPLDPYIDSLLDEARELRLERELLN 109
BLAST of mRNA_P-littoralis_Contig129.34.2 vs. uniprot
Match: F0Y9P6_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y9P6_AURAN) HSP 1 Score: 80.5 bits (197), Expect = 3.580e-15 Identity = 43/87 (49.43%), Postives = 59/87 (67.82%), Query Frame = 1
Query: 73 TRKLNAFGLKFDDLMIEENEDVAEAVRRLTPEQQLARKRRQFRAFDISLKKTPLPDHIQAVQEPFEPYLQDIIKEVREERLERELLN 333
+R LN +GLK+DD+ IE++ D A+A+ R++ E+ AR RR RAFDIS KK LP +Q +Q P PY +I E + R+ERELLN
Sbjct: 1 SRSLNQYGLKYDDVKIEQDADYAKALGRISDEEVQARARRMKRAFDISFKKKSLPADLQRLQAPLAPYATPLIDEAKARRVERELLN 87
BLAST of mRNA_P-littoralis_Contig129.34.2 vs. uniprot
Match: A0A7R9U2G2_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U2G2_9STRA) HSP 1 Score: 75.1 bits (183), Expect = 1.270e-12 Identity = 41/100 (41.00%), Postives = 66/100 (66.00%), Query Frame = 1
Query: 34 VLDVAAQQYKRSMTRKLNAFGLKFDDLMIEENEDVAEAVRRLTPEQQLARKRRQFRAFDISLKKTPLPDHIQAVQEPFEPYLQDIIKEVREERLERELLN 333
+++ A+ Y S+TR L +GL++DD++ E V EA+ RLTPE+++ R RR RA D+S KK +P+ +Q +PF+ YL D ++ +E+ ERE+LN
Sbjct: 44 IMNAVAKAYSESVTRSLQRYGLRYDDVVNEALPSVQEALTRLTPEEKVGRDRRLKRALDLSFKKKTMPEEMQNY-DPFQKYLYDHKEKALKEQDEREILN 142
BLAST of mRNA_P-littoralis_Contig129.34.2 vs. uniprot
Match: A0A059LHI6_9CHLO (Cytochrome b-c1 complex subunit 7 n=1 Tax=Helicosporidium sp. ATCC 50920 TaxID=1291522 RepID=A0A059LHI6_9CHLO) HSP 1 Score: 73.2 bits (178), Expect = 3.720e-12 Identity = 47/108 (43.52%), Postives = 68/108 (62.96%), Query Frame = 1
Query: 10 LLKKAGDFVLDVAAQQYKRSMTRKLNAFGLKFDDLMIEENE-DVAEAVRRLTPEQQLARKRRQFRAFDISLKKTPLPDHIQAVQEPFEPYLQDIIKEVREERLERELL 330
+L K D ++ V A +Y+ ++ L +GL+++DLM E++ +V EA+RRL + AR +R RA D+S+K LP +QAVQ PFE YLQ + VR ER ERE L
Sbjct: 6 MLAKLFDPLVAVIAPRYQAAVGSSLRKYGLRYEDLMDHEHDLNVNEALRRLPQDVVDARNQRIKRALDLSMKHAELPKELQAVQTPFESYLQATLDVVRAERAEREAL 113
BLAST of mRNA_P-littoralis_Contig129.34.2 vs. uniprot
Match: A0A2V3J0E6_9FLOR (Cytochrome b-c1 complex subunit 7-1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J0E6_9FLOR) HSP 1 Score: 70.5 bits (171), Expect = 2.670e-11 Identity = 35/100 (35.00%), Postives = 70/100 (70.00%), Query Frame = 1
Query: 34 VLDVAAQQYKRSMTRKLNAFGLKFDDLMIEENEDVAEAVRRLTPEQQLARKRRQFRAFDISLKKTPLPDHIQAVQEPFEPYLQDIIKEVREERLERELLN 333
+L AA+ Y+ ++ +L +GL++DDL+ E +++V A+ +L+P++ R +R RA D+ +KKT LP+ IQA ++ + PYL+ I +++++LER++++
Sbjct: 16 LLSRAARSYQAAVGAELRRYGLRYDDLLNEYDDEVKHAISKLSPQELELRNKRLKRAIDLDVKKTYLPEDIQAQEDIWNPYLRTRIAALKQKKLERQIVD 115
BLAST of mRNA_P-littoralis_Contig129.34.2 vs. uniprot
Match: A0A1X6NXZ7_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NXZ7_PORUM) HSP 1 Score: 68.2 bits (165), Expect = 1.930e-10 Identity = 35/93 (37.63%), Postives = 61/93 (65.59%), Query Frame = 1
Query: 46 AAQQYKRSMTRKLNAFGLKFDDLMIEENEDVAEAVRRLTPEQQLARKRRQFRAFDISLKKTPLPDHIQAVQEPFEPYLQDIIKEVREERLERE 324
AA Y+ ++ +L +GL++DDL+ E + +V + +R + PE+ R +R RA D+ LKKT LPD IQA Q+ + PY++ + +++ +LER+
Sbjct: 25 AAASYQAAVGNELRKYGLRYDDLLNEYDPEVRKTIRTMPPEEAELRAKRLTRAIDVDLKKTQLPDPIQAKQDIWNPYIRSRLGALKQSQLERQ 117
BLAST of mRNA_P-littoralis_Contig129.34.2 vs. uniprot
Match: A0A7J7QHK9_9CHLO (Cytochrome b-c1 complex subunit 7 n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7QHK9_9CHLO) HSP 1 Score: 66.2 bits (160), Expect = 7.370e-10 Identity = 39/83 (46.99%), Postives = 55/83 (66.27%), Query Frame = 1
Query: 37 LDVAAQQYKRSMTRKLNAFGLKFDDLMIEENE-DVAEAVRRLTPEQQLARKRRQFRAFDISLKKTPLPDHIQAVQEPFEPYLQ 282
L+ AA +Y+ + L +GL++DDL + DVAEA+RRL E+ +AR R RA D+SLK T LP+ +QAVQ PF+ Y+Q
Sbjct: 11 LEWAASRYQARLATNLKKYGLRYDDLCDPMMDLDVAEALRRLPDEEVVARNARLKRAMDLSLKGTVLPEELQAVQTPFQHYIQ 93
BLAST of mRNA_P-littoralis_Contig129.34.2 vs. uniprot
Match: UPI001FB186E0 (cytochrome b-c1 complex subunit 7-like n=1 Tax=Impatiens glandulifera TaxID=253017 RepID=UPI001FB186E0) HSP 1 Score: 65.9 bits (159), Expect = 1.360e-9 Identity = 46/111 (41.44%), Postives = 66/111 (59.46%), Query Frame = 1
Query: 1 MAKLLKKAGDFVLDVAAQQYKRSMTRKLNAFGLKFDDLMIEENE-DVAEAVRRLTPEQQLARKRRQFRAFDISLKKTPLPDHIQAVQEPFEPYLQDIIKEVREERLERELL 330
MA L+K D + A +K+S++R+L +GL++DDL + DV EA+ RL E AR +R RA D+S+K LP +QA Q PF YLQ+++ V+ E ERE L
Sbjct: 1 MAALVKWFIDPKKNPLAAMHKKSVSRRLRNYGLRYDDLFDPYFDLDVKEALNRLPREIVDARNQRLLRAMDLSMKHDYLPPSLQAQQTPFRGYLQEMLALVKRESAEREAL 111
BLAST of mRNA_P-littoralis_Contig129.34.2 vs. uniprot
Match: M2XVT8_GALSU (Ubiquinol-cytochrome c reductase subunit 7 n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XVT8_GALSU) HSP 1 Score: 64.7 bits (156), Expect = 2.990e-9 Identity = 34/92 (36.96%), Postives = 59/92 (64.13%), Query Frame = 1
Query: 49 AQQYKRSMTRKLNAFGLKFDDLMIEENEDVAEAVRRLTPEQQLARKRRQFRAFDISLKKTPLPDHIQAVQEPFEPYLQDIIKEVREERLERE 324
A+ + R + ++L +GL++DDL+ E++ DV +A+ L ++ R +R RAFD+S+KKT LP+ I ++ + PYL+ I+ +R ER E
Sbjct: 22 ARVHLRGVEKELRKYGLRYDDLLNEQDPDVKQAIEMLPEHEKQLRAKRFIRAFDLSMKKTQLPEEIAQKEDIWNPYLRSRIQLIRRERHRNE 113 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig129.34.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig129.34.2 >prot_P-littoralis_Contig129.34.2 ID=prot_P-littoralis_Contig129.34.2|Name=mRNA_P-littoralis_Contig129.34.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=114bp MAKLLKKAGDFVLDVAAQQYKRSMTRKLNAFGLKFDDLMIEENEDVAEAVback to top mRNA from alignment at P-littoralis_Contig129:96840..104675- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig129.34.2 ID=mRNA_P-littoralis_Contig129.34.2|Name=mRNA_P-littoralis_Contig129.34.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=7836bp|location=Sequence derived from alignment at P-littoralis_Contig129:96840..104675- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig129:96840..104675- >mRNA_P-littoralis_Contig129.34.2 ID=mRNA_P-littoralis_Contig129.34.2|Name=mRNA_P-littoralis_Contig129.34.2|organism=Pylaiella littoralis U1_48|type=CDS|length=342bp|location=Sequence derived from alignment at P-littoralis_Contig129:96840..104675- (Pylaiella littoralis U1_48)back to top |