mRNA_P-littoralis_Contig1287.7.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig1287.7.1 vs. uniprot
Match: A0A6H5KL26_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL26_9PHAE) HSP 1 Score: 169 bits (429), Expect = 6.770e-51 Identity = 83/112 (74.11%), Postives = 92/112 (82.14%), Query Frame = 1
Query: 22 RVARTVAVWQVVLRDYSDDDDAGTDED--NDPPMKRTRRVLPRPDYRASFWWRMLGETGLKEPGSREARLFRRRFRIPYQFFTELIELVKEKKWFSIRQTDVAGRQCIPVEL 351
R TV+ W+VVLR + DDD+ DE PP+KR RRVLPRPDYRASFWWRMLGETGLKEP SRE +LFRRRFRIPYQFFTEL+ELVKEKKWF +R+ DVAGR CIPVEL
Sbjct: 36 RAVLTVSAWRVVLRSFPDDDEL-EDEGLGGGPPVKRARRVLPRPDYRASFWWRMLGETGLKEPASREGKLFRRRFRIPYQFFTELVELVKEKKWFPMRKQDVAGRMCIPVEL 146
BLAST of mRNA_P-littoralis_Contig1287.7.1 vs. uniprot
Match: A0A6H5KGJ6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGJ6_9PHAE) HSP 1 Score: 166 bits (419), Expect = 1.530e-49 Identity = 82/110 (74.55%), Postives = 93/110 (84.55%), Query Frame = 1
Query: 37 VAVWQVVLRDYSDDDDAGTDED--NDPPMKRTRRVLPRPDYRASFWWRMLGETGLKEPGSREARLFRRRFRIPYQFFTELIELVKEKKWFSIRQTDVAGRQCIPVELKVL 360
V+ W+VVLR + D D+ DE P+KRTRRVLPRPDYRASFWWRMLGETGLKEP SREA+LFRRRFRIPYQFFTEL+ELVK+KKWF +R+ DVAGR CIPVELKV+
Sbjct: 25 VSTWRVVLRSFPDGDEL-EDEGLGGGSPVKRTRRVLPRPDYRASFWWRMLGETGLKEPVSREAKLFRRRFRIPYQFFTELMELVKKKKWFPMRKKDVAGRMCIPVELKVM 133
BLAST of mRNA_P-littoralis_Contig1287.7.1 vs. uniprot
Match: A0A6H5KPT7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPT7_9PHAE) HSP 1 Score: 158 bits (400), Expect = 1.920e-46 Identity = 81/115 (70.43%), Postives = 91/115 (79.13%), Query Frame = 1
Query: 22 RVARTVAVWQVVLRDYSDDDDAGTDED--NDPPMKRTRRVLPRPDYRASFWWRMLGETGLKEPGSREARLFRRRFRIPYQFFTELIELVKEKKWFSIRQTDVAGRQCIPVELKVL 360
R TVA W+VVLR + D D+ DE P+KRTRRVLPRPDYRASFWWRMLGETGLKEP SRE +LFR RFRIPYQF TEL+ELVK+KK F +R+ DVAGR CIPVELKV+
Sbjct: 36 RAVLTVATWRVVLRSFPDGDEL-EDEGLGGGSPVKRTRRVLPRPDYRASFWWRMLGETGLKEPASREVKLFRGRFRIPYQFLTELMELVKKKKRFPMRKKDVAGRMCIPVELKVM 149
BLAST of mRNA_P-littoralis_Contig1287.7.1 vs. uniprot
Match: A0A6H5JPH7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPH7_9PHAE) HSP 1 Score: 161 bits (407), Expect = 8.000e-44 Identity = 85/171 (49.71%), Postives = 110/171 (64.33%), Query Frame = 1
Query: 31 RTVAVWQVVLRDYSDDDDAGTDEDNDPPMKRTRRVLPRPDYRASFWWRML---GETGLKEPGSREARLFRRRFRIPYQFFTELIELVKEKKWFSIRQTDVAGRQCIPVELKVLASLHILGRGNFFEDMTQMSHISEPTIQITFHMFNKLFAQEFYHDHVHLPTAGEDQDQV 534
R+VAVW V++ D+ DD + T++D + RRV R DY S WW+ L ETG + +REAR FR FR+PY FF L+ELV+++ WF ++DV GRQ +PVELKVLA L IL RGN F D+ MS IS T+ TFH F K FA E Y ++V+LPT GED +V
Sbjct: 64 RSVAVWDVIMEDFEDDLELDTEDDEASREVKRRRVYVRKDYTKSGWWQELMELRETGETDHTTREARRFRNNFRVPYPFFVHLVELVRDRDWFPTGESDVTGRQAVPVELKVLACLQILSRGNVFADIYHMSFISFQTVASTFHRFCKYFAAELYDEYVYLPT-GEDLRKV 233
BLAST of mRNA_P-littoralis_Contig1287.7.1 vs. uniprot
Match: A0A6H5KQT0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQT0_9PHAE) HSP 1 Score: 146 bits (369), Expect = 7.930e-42 Identity = 71/98 (72.45%), Postives = 81/98 (82.65%), Query Frame = 1
Query: 22 RVARTVAVWQVVLRDYSDDDDAGTDE-DNDPPMKRTRRVLPRPDYRASFWWRMLGETGLKEPGSREARLFRRRFRIPYQFFTELIELVKEKKWFSIRQ 312
R TVA W+VVLR + D D+ + D P+KRTRRVLPRPDYRASFWWRMLGETGLKEP SREA+LFRRRFRIPYQFFTEL+ELVK+KKWF +R+
Sbjct: 36 RAVLTVATWRVVLRSFPDGDELEDEGLDGGSPVKRTRRVLPRPDYRASFWWRMLGETGLKEPASREAKLFRRRFRIPYQFFTELMELVKKKKWFPMRK 133
BLAST of mRNA_P-littoralis_Contig1287.7.1 vs. uniprot
Match: A0A6H5JQ76_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQ76_9PHAE) HSP 1 Score: 149 bits (376), Expect = 8.760e-42 Identity = 78/115 (67.83%), Postives = 90/115 (78.26%), Query Frame = 1
Query: 22 RVARTVAVWQVVLRDYSDDDDAGTDED--NDPPMKRTRRVLPRPDYRASFWWRMLGETGLKEPGSREARLFRRRFRIPYQFFTELIELVKEKKWFSIRQTDVAGRQCIPVELKVL 360
R T+A W+VVLR + D D+ DE P+KR RRVLPRP+YRASFWW MLGETGLKEP SR+A+LFRRRFRIPYQFFTEL+ELVK KKWF +R+ VAGR IPVELKV+
Sbjct: 117 RAVLTMATWRVVLRSFLDGDEL-EDEGLGGGSPVKRPRRVLPRPEYRASFWWCMLGETGLKEPASRDAKLFRRRFRIPYQFFTELMELVK-KKWFPVRKKGVAGRMRIPVELKVM 229
BLAST of mRNA_P-littoralis_Contig1287.7.1 vs. uniprot
Match: A0A6H5JAU4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAU4_9PHAE) HSP 1 Score: 144 bits (362), Expect = 2.140e-37 Identity = 80/174 (45.98%), Postives = 103/174 (59.20%), Query Frame = 1
Query: 31 RTVAVWQVVLRDYSDDDDAGTDEDNDPPMKRTRRVLPRPDYRASFWWRMLGET------GLKEPGSREARLFRRRFRIPYQFFTELIELVKEKKWFSIRQTDVAGRQCIPVELKVLASLHILGRGNFFEDMTQMSHISEPTIQITFHMFNKLFAQEFYHDHVHLPTAGEDQDQV 534
RT+ W +VL D + D +E+ D + RRV PR DY S W L E G+ +P SR AR FR FR+PY FF EL+ LVK++ WF + D +GR+ IPV+LKVLA L IL RGN F D+ MS IS T TFH F + FA+E Y +H+ LPT G+ Q +V
Sbjct: 45 RTLVAWDLVLDDLDELDPDSEEEEEDNREIKRRRVYPRKDYNISGWAIQLQELKDLEVDGIVDPTSRPARRFRESFRLPYPFFVELVALVKQRDWFPTGKQDASGRRGIPVQLKVLACLQILARGNCFADIYHMSFISMQTAAATFHRFTRYFAREMYAEHIFLPT-GDYQKKV 217
BLAST of mRNA_P-littoralis_Contig1287.7.1 vs. uniprot
Match: A0A6H5KSI7_9PHAE (DDE Tnp4 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSI7_9PHAE) HSP 1 Score: 141 bits (356), Expect = 2.340e-37 Identity = 77/179 (43.02%), Postives = 110/179 (61.45%), Query Frame = 1
Query: 19 RRVARTVAVWQVVLRDYSDDDDAGTDEDNDPPMKRTRRVLPRPDYRASFWWRMLGETGLKEPGSREARLFRRRFRIPYQFFTELIELVKEKKWFSIRQTDVAGRQCIPVELKVLASLHILGRGNFFEDMTQMSHISEPTIQITFHMFNKLFAQEFYHDHVHLPTAGEDQDQVTGLIVQV 555
RR AR+V+ W VL D +D+ +E P +KRTRRV R D+R S WW L + L + + A++FR RFR+PY FF EL++L + K+WFS + D A R+ IP+ELKVL G+GN F+D+ Q+S +SE Q FH F + A E + +H++LPT G D+V G+ Q+
Sbjct: 30 RRTARSVSYWDAVLFDEDSEDE---EEVVGPKVKRTRRVTQRRDWRTSAWWEKLQDVDLADHTTAAAKVFRERFRVPYPFFQELVKLSRAKRWFSPGEKDAANREGIPLELKVL------GKGNCFDDVEQLSKMSESIAQALFHKFCRHSAAEMFDEHIYLPT-GTYLDEVMGIFHQL 198
BLAST of mRNA_P-littoralis_Contig1287.7.1 vs. uniprot
Match: A0A6H5JRQ7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRQ7_9PHAE) HSP 1 Score: 123 bits (309), Expect = 1.390e-31 Identity = 66/143 (46.15%), Postives = 93/143 (65.03%), Query Frame = 1
Query: 118 KRTRRVLPRPDYRASFWWRMLGETGL-KEPGSREARLFRRRFRIPYQFFTELIELVKEKKW--FSIRQTDVAGR---QCIPVELKVLASLHILGRGNFFEDMTQMSHISEPTIQITFHMFNKLFAQEFYHDHVHLPTAGEDQD 528
KR R V PR DYR W RML + L ++P +REA+ FRRRFR+PY FF L++ VK W F+ + ++ GR +CIPVE KVLA L ILGRGN+F+D+++++ + E T+ FH F + FA+EF+ V +P E +D
Sbjct: 50 KRRRTVRPRADYRTLPWARMLEKADLLQDPSTREAKQFRRRFRVPYPFFLSLVDEVKAGNWPGFTTDEFELGGRGTRRCIPVETKVLAVLRILGRGNYFDDVSEVTGMGEATVNHMFHKFTERFAREFFPVWVRMPNEDELKD 192
BLAST of mRNA_P-littoralis_Contig1287.7.1 vs. uniprot
Match: A0A6H5JHC3_9PHAE (DDE Tnp4 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHC3_9PHAE) HSP 1 Score: 127 bits (318), Expect = 2.770e-31 Identity = 73/148 (49.32%), Postives = 89/148 (60.14%), Query Frame = 1
Query: 94 DEDNDPPMKRTRRVLPRPDYRASFWWRMLGET--GLKEPGSREARLFRRRFRIPYQFFTELIELVKEKKW--FSIRQTDVAGR---QCIPVELKVLASLHILGRGNFFEDMTQMSHISEPTIQITFHMFNKLFAQEFYHDHVHLPTAG 516
D +P KR R V PRPDY S W ML E L +P +++ARLFRRRFR+PY F EL++ +K W F+ TD+ GR CIPVELKVL GRGNFF+D+ Q+S ISE TIQ FH F + FA EF+ HV P
Sbjct: 45 DATEEPSAKRKRTVYPRPDYHNSAWAIMLREKEDALADPTTKDARLFRRRFRMPYPIFLELVKEIKSAGWKGFTTDATDLGGRGTRPCIPVELKVL------GRGNFFDDIPQLSFISEQTIQRVFHEFTQRFALEFFPKHVKFPQGA 186 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1287.7.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1287.7.1 >prot_P-littoralis_Contig1287.7.1 ID=prot_P-littoralis_Contig1287.7.1|Name=mRNA_P-littoralis_Contig1287.7.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=187bp MRRRRERRVARTVAVWQVVLRDYSDDDDAGTDEDNDPPMKRTRRVLPRPDback to top mRNA from alignment at P-littoralis_Contig1287:26949..28852+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig1287.7.1 ID=mRNA_P-littoralis_Contig1287.7.1|Name=mRNA_P-littoralis_Contig1287.7.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1904bp|location=Sequence derived from alignment at P-littoralis_Contig1287:26949..28852+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig1287:26949..28852+ >mRNA_P-littoralis_Contig1287.7.1 ID=mRNA_P-littoralis_Contig1287.7.1|Name=mRNA_P-littoralis_Contig1287.7.1|organism=Pylaiella littoralis U1_48|type=CDS|length=561bp|location=Sequence derived from alignment at P-littoralis_Contig1287:26949..28852+ (Pylaiella littoralis U1_48)back to top |