mRNA_P-littoralis_Contig1285.4.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig1285.4.1 vs. uniprot
Match: D7G157_ECTSI (CRAL-TRIO domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G157_ECTSI) HSP 1 Score: 483 bits (1242), Expect = 4.390e-161 Identity = 222/253 (87.75%), Postives = 242/253 (95.65%), Query Frame = 2
Query: 500 APATELAEDGYPKDMEIPVRYVKGMEGDVVEARRRWIATLKWREEQKVDGILDEACPHFDIIKKYYPHFYFKHAKNGSIVYYEIPGQISLPKLRENGLDMDALCRHYVYITEFLWNELDTNPEGKLFTCMDMKGTKLSMFVGEVKEFLLRSAKMIGAHYPERSFKIFILNAPWWFNIVWKFVTPFVHANTRAKVVVCTGNFLDKMGELIDLENVPTEIGGQDPTPPLEGPQEVRMRDHVMKVLQEKGMEMKPI 1258
A +ELAEDGYPKDMEIP+RYVKGMEGDVVEARRRWIATLKWREE+KVDGILDEACPHFDIIKKYYPHFYFKHAKNGS+VYYEIPG+I L KLRENGLDMD+LCRHYVYITEFLW ELD NPEGKLFTCMDMKGTKLSMF GEVKEFL+RSAKM+GAHYPERS+KIFILNAPWWF++VWKFVTPFVH NTRAKVVVC GNFL+KMGELIDLENVP ++GGQDPTPPL+GPQE++M +HV+KVL+EKGMEMKPI
Sbjct: 49 ATTSELAEDGYPKDMEIPIRYVKGMEGDVVEARRRWIATLKWREEEKVDGILDEACPHFDIIKKYYPHFYFKHAKNGSVVYYEIPGKIDLNKLRENGLDMDSLCRHYVYITEFLWKELDKNPEGKLFTCMDMKGTKLSMFAGEVKEFLVRSAKMVGAHYPERSYKIFILNAPWWFSVVWKFVTPFVHPNTRAKVVVCGGNFLEKMGELIDLENVPQDVGGQDPTPPLQGPQELQMHEHVVKVLKEKGMEMKPI 301
BLAST of mRNA_P-littoralis_Contig1285.4.1 vs. uniprot
Match: A0A835Z260_9STRA (CRAL-TRIO domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z260_9STRA) HSP 1 Score: 342 bits (876), Expect = 5.310e-107 Identity = 153/258 (59.30%), Postives = 200/258 (77.52%), Query Frame = 2
Query: 497 SAPATE---LAEDGYPKDMEIPVRYVKGMEGDVVEARRRWIATLKWREEQKVDGILDEACPHFDIIKKYYPHFYFKHAKNGSIVYYEIPGQISLPKLRENGLDMDALCRHYVYITEFLWNELDTNPEGKLFTCMDMKGTKLSMFVGEVKEFLLRSAKMIGAHYPERSFKIFILNAPWWFNIVWKFVTPFVHANTRAKVVVCTGNFLDKMGELIDLENVPTEIGGQDPTPPLEGPQEVRMRDHVMKVLQEKGMEMKPIL 1261
+ PAT L +DGYP D+EIP+RY+KGMEGD+ EARRRW+ TLKWR+ KVD +LDE HFD IKKYYPH+ K AKNG +VYYEIPG+ L KLRENG+D+D L RHY+YITEF+W LDT E KL + MD++G L+ F GEV+E+++R+AK+IGAHYPERSFKIF+LNAPWWFN+VWK ++P +HANTRAKVVVC ++DK+ ELID+E++P +IGG+D L+ +EV +++HV KVL + + P +
Sbjct: 24 ATPATNGQPLLDDGYPGDLEIPIRYIKGMEGDMAEARRRWVETLKWRKSYKVDTMLDEPQLHFDAIKKYYPHYVSKRAKNGCLVYYEIPGETDLKKLRENGVDIDQLIRHYIYITEFIWRRLDTGEESKLLSIMDLRGVSLAQFAGEVREYMVRAAKLIGAHYPERSFKIFVLNAPWWFNMVWKVLSPLMHANTRAKVVVCGATYMDKLSELIDIESIPQDIGGRDANYGLKSDEEVALKEHVYKVLADSNLYQAPTV 281
BLAST of mRNA_P-littoralis_Contig1285.4.1 vs. uniprot
Match: A0A7S3Y7R1_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y7R1_HETAK) HSP 1 Score: 221 bits (563), Expect = 9.350e-59 Identity = 107/244 (43.85%), Postives = 152/244 (62.30%), Query Frame = 2
Query: 431 AGSLRGSSTGGGEPVVAATNGG-SAPATELAEDGYPKDMEIPVRYVKGMEGDVVEARRRWIATLKWREEQKVDGILDEACPHFDIIKKYYPHFYFKHAKNGSIVYYEIPGQISLPKLRENGLDMDALCRHYVYITEFLWNELDTNPEGKLFTCMDMKGTKLSMFVGEVKEFLLRSAKMIGAHYPERSFKIFILNAPWWFNIVWKFVTPFVHANTRAKVVVCTGNFLDKMGELIDLENVPTEIGG 1159
A +L GSST G + GG PA A +P RY++G +GD+ EARRRW TL+WR EQ VDGILDE P+F +IKKYYPHF +K +NG + YYE G+ + +R G+ + AL RHYV+++EFLW ++ + + + T MD++G S F G+ KEF + + +I +HY ERS KIF++NAP WFN++WK V P +H NT+ K+ +C +++ + ENVP E GG
Sbjct: 120 AAALPGSSTDDGFAALGDPEGGVPLPAAAAAAGPTAGGAALPDRYIRGCDGDLEEARRRWALTLRWRREQNVDGILDEPQPYFFVIKKYYPHFTYKRGRNGCVTYYEQVGRADIEAMRARGVTIAALVRHYVFVSEFLWRRIEADDDAQAITIMDIEGCGFSQFKGDTKEFFQQCSSVIQSHYVERSNKIFVINAPGWFNMIWKVVRPMLHENTQRKISICGKGRYEELLAYVGPENVPAEYGG 363
BLAST of mRNA_P-littoralis_Contig1285.4.1 vs. uniprot
Match: A0A7S1XKZ6_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XKZ6_9STRA) HSP 1 Score: 194 bits (494), Expect = 6.020e-51 Identity = 101/245 (41.22%), Postives = 148/245 (60.41%), Query Frame = 2
Query: 524 DGYPKDMEIPVRYVKGMEGDVVEARRRWIATLKWREEQKVDGILDEACPHFDIIKKYYPHFYFKHAKNGSIVYYEIPGQISLPKLRENGLDMDALCRHYVYITEFLWNELDTNPEGKLFTCMDMKGTKLSMFVGEVKEFLLRSAKMIGAHYPERSFKIFILNAPWWFNIVWKFVTPFVHANTRAKVVVCTGNFLDKMGELIDLENVPTEIGGQDPTPPLEGPQEVRMRDHVMKVLQEKGMEMKPI 1258
DG P + VR+VKG +GDV EA RR+ T WR+E+ ++ IL+E D IK YPH + + ++G +VY E G +++ L+ G++ L R+YV ITEF W LDT EGKL T +DM+G LS G+VK FL +A ++ +HY ERS+KIF++ P WF +VW V PF+HANTR KV + +F D++ E + E++P + GG D P+E+ + +H+ V G E K +
Sbjct: 139 DGPP----MTVRFVKGCDGDVAEAWRRYGETWAWRKEENINDILNEPQEDIDHIKANYPHAFHRRTRSGQLVYIERLGGVNINALKAGGVNTAELLRYYVKITEFAWRVLDTREEGKLCTILDMRGVSLSDIGGDVKAFLTGAASVVSSHYVERSYKIFVIGVPRWFTLVWAIVKPFLHANTRKKVTILGSSFHDELLEHVAAEHLPPDFGGTDTCEFGTSPEELELLNHIKAV--NAGAETKYV 377
BLAST of mRNA_P-littoralis_Contig1285.4.1 vs. uniprot
Match: A0A4D9DA19_9STRA (CRAL-TRIO domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DA19_9STRA) HSP 1 Score: 189 bits (479), Expect = 4.600e-50 Identity = 101/266 (37.97%), Postives = 155/266 (58.27%), Query Frame = 2
Query: 476 VAATNGGSAPATELAEDGYPKDMEIP-VRYVKGMEGDVVEARRRWIATLKWREEQKVDGILDEACPHFDIIKKYYPHFYFKHAKNGSIVYYEIPGQISLPKLRENGLDMDALCRHYVYITEFLWNELDTNPEGKLFTCMDMKGTKLSMFVGEVKEFLLRSAKMIGAHYPERSFKIFILNAPWWFNIVWKFVTPFVHANTRAKVVVCTGN-FLDKMGELIDLENVPTEIGG------QDPTPPLEGPQEVRMRDHVMKVLQEKGMEM 1249
V+ TN AP++ LA+ D + P R++ G GD+ EA+RRW TL+WR+E D IL++ FD+IK YPH+Y + G VYYE GQ+ ++R G ++ L HY+++TEF +N+L + K T +D++G + GE +FL RS +IG HYPERS I I+ AP WF+++WK + P +++ T+AK +C+ + E +D E +P E GG Q + + P+EVRMR+ V+ V + G+EM
Sbjct: 32 VSGTNDHVAPSSNLAKKVETPDPDKPNQRFIDGCLGDMEEAKRRWRITLQWRKEFGTDEILEKPHKFFDLIKDAYPHWYCCQGRTGQPVYYERSGQVDQRRMRAAGCGVEELVWHYIWMTEFCYNQLHPSETAKTITILDVQGVGIRDLAGEAFDFLRRSIHLIGEHYPERSLVIMIVGAPTWFSVLWKIIRPLINSRTQAKCKICSKKETFQTIKEFVDPEFIPVEYGGLLKYSDQPDSCRRQSPEEVRMREFVLAVNRRHGVEM 297
BLAST of mRNA_P-littoralis_Contig1285.4.1 vs. uniprot
Match: W2QZT3_PHYPN (CRAL-TRIO domain-containing protein n=24 Tax=Phytophthora TaxID=4783 RepID=W2QZT3_PHYPN) HSP 1 Score: 193 bits (491), Expect = 8.490e-49 Identity = 90/203 (44.33%), Postives = 134/203 (66.01%), Query Frame = 2
Query: 557 RYVKGMEGDVVEARRRWIATLKWREEQKVDGILDEACPHFDIIKKYYPHFYFKHAKNGSIVYYEIPGQISLPKLRENGLDMDALCRHYVYITEFLWNELDTNPEGKLFTCMDMKGTKLSMFVGEVKEFLLRSAKMIGAHYPERSFKIFILNAPWWFNIVWKFVTPFVHANTRAKVVVCTGN-FLDKMGELIDLENVPTEIGGQ 1162
R++ G +GD + R R++ATL+WR++ +D IL P+F+ IKKYYP ++ ++G VYYE PG+I LP L+ GL +D L RHY+YITE+LW ++ N G+ T +D+ G + GEV +F+ R++ GAHYPERS IFI+N P WFN++W+ V P + TR KV + G+ L ++ LIDLEN+P++ GG+
Sbjct: 369 RFIAGEKGDEEKGRARYLATLEWRKDNNIDNILVTPHPNFETIKKYYPQYFHGRTRDGLPVYYERPGKIDLPALKREGLSIDDLLRHYMYITEYLWRVVEPNDSGRSITVLDVTGIGMYDLGGEVLDFIKRASAFTGAHYPERSAHIFIINIPGWFNMIWRMVKPMIDPVTREKVHMLKGSAILKELETLIDLENIPSDFGGE 571
BLAST of mRNA_P-littoralis_Contig1285.4.1 vs. uniprot
Match: A0A3F2RWM8_9STRA (Threonine ammonia-lyase n=6 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RWM8_9STRA) HSP 1 Score: 197 bits (501), Expect = 1.770e-48 Identity = 93/203 (45.81%), Postives = 136/203 (67.00%), Query Frame = 2
Query: 557 RYVKGMEGDVVEARRRWIATLKWREEQKVDGILDEACPHFDIIKKYYPHFYFKHAKNGSIVYYEIPGQISLPKLRENGLDMDALCRHYVYITEFLWNELDTNPEGKLFTCMDMKGTKLSMFVGEVKEFLLRSAKMIGAHYPERSFKIFILNAPWWFNIVWKFVTPFVHANTRAKVVVCTGN-FLDKMGELIDLENVPTEIGGQ 1162
R+V G +GDV + R+R++ TL+WR+E +D IL P+F+IIKKYYP ++ ++G VYYE PG+I LP L+ GL +D L RHY+YITE+LW ++ N G+ T +D+ G + GEV +F+ R++ GAHYPERS IFI+N P WFN++W+ V P + TR KV + G+ L ++ LIDLEN+P++ GG+
Sbjct: 247 RFVAGEKGDVEKGRQRYLHTLEWRKENNIDNILVTPHPNFEIIKKYYPQYFHGRTRDGLPVYYERPGKIDLPALKREGLSIDDLLRHYMYITEYLWRVVEPNDSGRSITVLDVTGIGMYDLGGEVLDFIKRASAFTGAHYPERSAHIFIINIPGWFNMIWRMVKPLIDPVTREKVHMLKGSAILRELETLIDLENIPSDFGGE 449
BLAST of mRNA_P-littoralis_Contig1285.4.1 vs. uniprot
Match: A0A662WTV4_9STRA (CRAL-TRIO domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WTV4_9STRA) HSP 1 Score: 197 bits (500), Expect = 2.900e-48 Identity = 99/234 (42.31%), Postives = 146/234 (62.39%), Query Frame = 2
Query: 470 PVVAATNGGSAPATELAEDGYPKDMEIPVRYVKGMEGDVVEARRRWIATLKWREEQKVDGILDEACPHFDIIKKYYPHFYFKHAKNGSIVYYEIPGQISLPKLRENGLDMDALCRHYVYITEFLWNELDTNPEGKLFTCMDMKGTKLSMFVGEVKEFLLRSAKMIGAHYPERSFKIFILNAPWWFNIVWKFVTPFVHANTRAKVVVCTGN-FLDKMGELIDLENVPTEIGGQDP 1168
P +T+ +AP LA G P + R++ G +GD + R R++ TL+WREE ++D IL PHF+IIKKYYP ++ + G VYYE PG+I LP L+ GL ++ L RHY+YITE+LW ++ N G+ T +D+ G + GEV +F+ R++ GAHYPERS IFI+N P WFN++W+ V P + TR KV + G+ L ++ LIDL+ +P+++GG P
Sbjct: 357 PNSVSTDASAAPPA-LAISGGP--IAFSPRFIAGEKGDEEKGRLRYLNTLEWREENQIDNILVTPHPHFEIIKKYYPQYFHGRTRAGLPVYYERPGKIDLPALKREGLSIEDLLRHYMYITEYLWRVVEPNDAGRSITVLDVTGIGMYDLGGEVLDFIKRASSFTGAHYPERSAHIFIINIPGWFNMIWRMVKPLIDPVTREKVHMLKGSAILRELETLIDLDQIPSDLGGNGP 587
BLAST of mRNA_P-littoralis_Contig1285.4.1 vs. uniprot
Match: A0A1V9ZL35_9STRA (SEC14 cytosolic factor n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZL35_9STRA) HSP 1 Score: 193 bits (490), Expect = 4.490e-48 Identity = 94/232 (40.52%), Postives = 148/232 (63.79%), Query Frame = 2
Query: 539 DMEIPVRYVKGMEGDVVEARRRWIATLKWREEQKVDGILDEACPHFDIIKKYYPHFYFKHAKNGSIVYYEIPGQISLPKLRENGLDMDALCRHYVYITEFLWNELDTNPEGKLFTCMDMKGTKLSMFVGEVKEFLLRSAKMIGAHYPERSFKIFILNAPWWFNIVWKFVTPFVHANTRAKVVVCTGNFL-DKMGELIDLENVPTEIGGQDPTPPLEGPQEVRMRDHVMKVLQ 1231
++ R+V +GD + R R+ ATL+WR E +VDGIL E PHF +IK+ YP ++ +KNG+ VYYE G+I L +L+ GL++D L RHY+YITE+LW EL+ + G+ + +D +G GEV EF+ R+ + AHYPERS +IFI+N P WFN++WK ++P V T+ K+ +C G + +++ + ID+ +P++ GG+ P E +E R+ +V + +Q
Sbjct: 452 ELAFSPRFVAAEKGDEAKGRARYEATLQWRRENRVDGILYEEQPHFHLIKQCYPQYFHGRSKNGNCVYYEKLGKIDLKRLKGAGLNLDQLLRHYMYITEYLWLELEPSDTGRTISVLDAEGVGFYDLTGEVMEFVRRAMAFVSAHYPERSAQIFIVNVPTWFNVIWKGISPLVDPVTKEKIRICKGKMVKEELLKSIDIAELPSDYGGEGPALG-ESAEEQRLAAYVDQFMQ 682
BLAST of mRNA_P-littoralis_Contig1285.4.1 vs. uniprot
Match: G4YXA9_PHYSP (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=G4YXA9_PHYSP) HSP 1 Score: 192 bits (488), Expect = 1.120e-47 Identity = 94/217 (43.32%), Postives = 139/217 (64.06%), Query Frame = 2
Query: 512 ELAEDGYPKDMEIPVRYVKGMEGDVVEARRRWIATLKWREEQKVDGILDEACPHFDIIKKYYPHFYFKHAKNGSIVYYEIPGQISLPKLRENGLDMDALCRHYVYITEFLWNELDTNPEGKLFTCMDMKGTKLSMFVGEVKEFLLRSAKMIGAHYPERSFKIFILNAPWWFNIVWKFVTPFVHANTRAKVVVCTGN-FLDKMGELIDLENVPTEIGG 1159
E A G P + R++ G +GDV + R R+ ATL+WR+E +D IL P+F+IIKKYYP ++ ++G VYYE PG+I LP L+ GL +D L RHY+Y+TE+LW ++ + G+ T +D+ G + GEV +F+ R++ GAHYPERS IFI+N P WFN++W+ V P + TR KV + G+ L ++ LID+EN+P++ GG
Sbjct: 471 ENAISGGP--IAFSPRFIAGEKGDVEKGRARYEATLQWRKENDIDNILVTPHPNFEIIKKYYPQYFHGKTRDGHPVYYERPGKIDLPALKREGLSIDDLLRHYMYMTEYLWRVVEPDDSGRSITVLDVTGIGMYDLGGEVLDFIKRASAFTGAHYPERSAHIFIINIPGWFNMIWRMVKPLIDPVTREKVHMLKGSAILKELETLIDMENIPSDFGG 685 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1285.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1285.4.1 >prot_P-littoralis_Contig1285.4.1 ID=prot_P-littoralis_Contig1285.4.1|Name=mRNA_P-littoralis_Contig1285.4.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=294bp MSALADAPQVAGTAAAAGSLRGSSTGGGEPVVAATNGGSAPATELAEDGYback to top mRNA from alignment at P-littoralis_Contig1285:16350..26228+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig1285.4.1 ID=mRNA_P-littoralis_Contig1285.4.1|Name=mRNA_P-littoralis_Contig1285.4.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=9879bp|location=Sequence derived from alignment at P-littoralis_Contig1285:16350..26228+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig1285:16350..26228+ >mRNA_P-littoralis_Contig1285.4.1 ID=mRNA_P-littoralis_Contig1285.4.1|Name=mRNA_P-littoralis_Contig1285.4.1|organism=Pylaiella littoralis U1_48|type=CDS|length=882bp|location=Sequence derived from alignment at P-littoralis_Contig1285:16350..26228+ (Pylaiella littoralis U1_48)back to top |