prot_P-littoralis_Contig1285.1.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig1285.1.2
Unique Nameprot_P-littoralis_Contig1285.1.2
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length169
Homology
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BLAST of mRNA_P-littoralis_Contig1285.1.2 vs. uniprot
Match: A0A6H5KV05_9PHAE (2Fe-2S ferredoxin-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KV05_9PHAE)

HSP 1 Score: 240 bits (613), Expect = 6.230e-79
Identity = 128/167 (76.65%), Postives = 143/167 (85.63%), Query Frame = 0 
Query:    1 MRGVDAWTTGLAVLALMGVTQGFVPYGAPAVRSASRSWGSSSSSANTKRARATIKVPARRAVSGMQMHQVTIEHEGKSTVLEVDDNTSILDAALDNDIELPHDCKLGVCLTCPSIVVSGEIDQSDGTLEDSVTAQGYALTCCSFARSDVTIRSVEEDELVGAQFSDR 167
            MRGVDA T G A LALMGVT+GFVPYG PA+RSA+ + G S +S +T+RAR     P     S +QMHQVTIEHEG STVLEVD+NT+IL+AALDNDI+LPHDCKLGVCLTCPS VVSGE+DQSDGTLEDSVTA GYALTCC++ARSDVTIRSVEEDELVGAQFSDR
Sbjct:    1 MRGVDACTAG-AFLALMGVTRGFVPYGTPAIRSAAATLGGSRTSDSTRRARQETLRPT---FSALQMHQVTIEHEGTSTVLEVDENTTILEAALDNDIDLPHDCKLGVCLTCPSKVVSGEVDQSDGTLEDSVTALGYALTCCTYARSDVTIRSVEEDELVGAQFSDR 163
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BLAST of mRNA_P-littoralis_Contig1285.1.2 vs. uniprot
Match: A0A7S3UW21_HETAK (Ferredoxin n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UW21_HETAK)

HSP 1 Score: 162 bits (410), Expect = 2.300e-48
Identity = 81/100 (81.00%), Postives = 87/100 (87.00%), Query Frame = 0 
Query:   68 HQVTIEHEGKSTVLEVDDNTSILDAALDNDIELPHDCKLGVCLTCPSIVVSGEIDQSDGTLEDSVTAQGYALTCCSFARSDVTIRSVEEDELVGAQFSDR 167
            HQVTIEHEG +TVLEV + TSILDAALD  I+LPHDCKLGVCLTCPS VVSGE+DQSDGTLEDSVTAQGYALTC +F RSD TI S+ EDELV AQFS R
Sbjct:   42 HQVTIEHEGTTTVLEVPEYTSILDAALDAGIDLPHDCKLGVCLTCPSKVVSGEVDQSDGTLEDSVTAQGYALTCMTFPRSDCTIMSITEDELVDAQFSGR 141
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BLAST of mRNA_P-littoralis_Contig1285.1.2 vs. uniprot
Match: A0A836CGC2_9STRA (2Fe-2S ferredoxin-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGC2_9STRA)

HSP 1 Score: 157 bits (398), Expect = 2.280e-46
Identity = 75/105 (71.43%), Postives = 87/105 (82.86%), Query Frame = 0 
Query:   64 GMQMHQVTIEHEGKSTVLEVDDNTSILDAALDNDIELPHDCKLGVCLTCPSIVVSGEIDQSDGTLEDSVTAQGYALTCCSFARSDVTIRSVEEDELVGAQFSDRQ 168
            G+ MHQVTIE  GKS  LEVD+ TS+L+AALD  IELPHDCKLGVCLTCPS +VSGE+DQ   TL+DSV  QGYALTCCSF RSD+ IR+++EDELVGAQF  R+
Sbjct:   51 GLYMHQVTIEVAGKSHTLEVDEKTSVLEAALDAGIELPHDCKLGVCLTCPSKIVSGEVDQDGTTLDDSVVEQGYALTCCSFPRSDLVIRAIDEDELVGAQFEGRE 155
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BLAST of mRNA_P-littoralis_Contig1285.1.2 vs. uniprot
Match: A0A7S2V4F7_9STRA (Ferredoxin n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V4F7_9STRA)

HSP 1 Score: 155 bits (391), Expect = 2.470e-45
Identity = 89/158 (56.33%), Postives = 110/158 (69.62%), Query Frame = 0 
Query:   11 LAVLALMGVT-QGFVPYGAPAVRSASRSWGSSSSSANTKRARATIKVPARRAVSGMQMHQVTIEHEGKSTVLEVDDNTSILDAALDNDIELPHDCKLGVCLTCPSIVVSGEIDQSDGTLEDSVTAQGYALTCCSFARSDVTIRSVEEDELVGAQFSDR 167
            L VLA +  T +GF  +    V     SW SS SS + +R      VP        + HQVTI+HEGK TVLEVD++T+IL+AALD  I+LPHDC+LGVCLTCPS +VSGE+DQ  GTL+DSV  QG+ALTC S+ RSD  +RSVEEDE+V AQF+DR
Sbjct:   11 LGVLAAIAATGEGFATHNLKPV-----SWRSSPSSLSRQRL-----VP--------KAHQVTIQHEGKDTVLEVDESTTILEAALDAGIDLPHDCQLGVCLTCPSRIVSGEVDQGMGTLDDSVVEQGFALTCISYPRSDCVVRSVEEDEMVNAQFADR 150
[Close]
BLAST of mRNA_P-littoralis_Contig1285.1.2 vs. uniprot
Match: A0A482SDV3_9ARCH (2Fe-2S iron-sulfur cluster binding domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SDV3_9ARCH)

HSP 1 Score: 147 bits (371), Expect = 1.960e-42
Identity = 70/98 (71.43%), Postives = 84/98 (85.71%), Query Frame = 0 
Query:   68 HQVTIEHEGKSTVLEVDDNTSILDAALDNDIELPHDCKLGVCLTCPSIVVSGEIDQSDGTLEDSVTAQGYALTCCSFARSDVTIRSVEEDELVGAQFS 165
            ++VTI+HEGK T+L+V D+ SIL+AALD  I+LPHDCKLGVCLTCPS +VSG++DQSDGTL  SV A+GYALTC SF  SDV +RS+EEDELV AQFS
Sbjct:   43 YKVTIQHEGKDTILDVQDDCSILNAALDAGIDLPHDCKLGVCLTCPSKIVSGKVDQSDGTLAKSVQAKGYALTCVSFPCSDVVVRSIEEDELVSAQFS 140
[Close]
BLAST of mRNA_P-littoralis_Contig1285.1.2 vs. uniprot
Match: A0A5K0VF29_9MAGN (Ferredoxin n=2 Tax=Nymphaea colorata TaxID=210225 RepID=A0A5K0VF29_9MAGN)

HSP 1 Score: 129 bits (324), Expect = 3.270e-35
Identity = 64/118 (54.24%), Postives = 86/118 (72.88%), Query Frame = 0 
Query:   47 TKRARATIKVPARRAVSGMQMHQVTIEHEGKSTVLEVDDNTSILDAALDNDIELPHDCKLGVCLTCPSIVVSGEIDQSDGTLEDSVTAQGYALTCCSFARSDVTIRSVEEDELVGAQF 164
            T+R R T +V    AV+  + ++VTI+HEGKST LEV ++ SIL+ ALD  +E+PHDCKLGVC+TCP+ +VSGE+DQS G L D V  +GYAL C S+ RSD  IR++ E+EL+  Q 
Sbjct:   33 TRRRRPTRQV----AVASTKNYKVTIDHEGKSTTLEVGEDESILERALDEGLEVPHDCKLGVCMTCPARLVSGEVDQSGGMLSDDVVERGYALLCASYPRSDCHIRTIPEEELLSLQL 146
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BLAST of mRNA_P-littoralis_Contig1285.1.2 vs. uniprot
Match: A0A8J5WV81_ZIZPA (2Fe-2S ferredoxin-type domain-containing protein n=1 Tax=Zizania palustris TaxID=103762 RepID=A0A8J5WV81_ZIZPA)

HSP 1 Score: 127 bits (318), Expect = 2.150e-34
Identity = 57/98 (58.16%), Postives = 78/98 (79.59%), Query Frame = 0 
Query:   68 HQVTIEHEGKSTVLEVDDNTSILDAALDNDIELPHDCKLGVCLTCPSIVVSGEIDQSDGTLEDSVTAQGYALTCCSFARSDVTIRSVEEDELVGAQFS 165
            ++VTIEH G+S V+EV+++ +IL+ ALD  I++PHDCKLGVC+TCP+ +V+G++DQSDG L D V AQGYAL C S+ RSD TIR + EDEL+  Q +
Sbjct:   43 YKVTIEHAGESRVVEVEEHETILERALDEGIDVPHDCKLGVCMTCPARLVAGQVDQSDGMLSDDVVAQGYALLCASYPRSDCTIRVIPEDELLQVQLA 140
[Close]
BLAST of mRNA_P-littoralis_Contig1285.1.2 vs. uniprot
Match: UPI001ADA50ED (ferredoxin C 1, chloroplastic n=1 Tax=Oryza brachyantha TaxID=4533 RepID=UPI001ADA50ED)

HSP 1 Score: 126 bits (317), Expect = 2.870e-34
Identity = 63/115 (54.78%), Postives = 82/115 (71.30%), Query Frame = 0 
Query:   51 RATIKVPARRAVSGMQMHQVTIEHEGKSTVLEVDDNTSILDAALDNDIELPHDCKLGVCLTCPSIVVSGEIDQSDGTLEDSVTAQGYALTCCSFARSDVTIRSVEEDELVGAQFS 165
            R    +PA RA      ++VTIEH G+S V+EV ++ +IL  ALD  I++PHDCKLGVC+TCP+ +V+GE+DQSDG L D V AQGYAL C S+ RSD TIR + EDEL+  Q +
Sbjct:   30 RVAAALPAPRA------YRVTIEHGGESRVVEVGEDETILSRALDEGIDVPHDCKLGVCMTCPARLVAGEVDQSDGMLSDDVVAQGYALLCASYPRSDCTIRVIPEDELLQVQLA 138
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BLAST of mRNA_P-littoralis_Contig1285.1.2 vs. uniprot
Match: Q850T5_ORYSJ (Ferredoxin n=11 Tax=Oryza TaxID=4527 RepID=Q850T5_ORYSJ)

HSP 1 Score: 126 bits (317), Expect = 3.320e-34
Identity = 58/98 (59.18%), Postives = 76/98 (77.55%), Query Frame = 0 
Query:   68 HQVTIEHEGKSTVLEVDDNTSILDAALDNDIELPHDCKLGVCLTCPSIVVSGEIDQSDGTLEDSVTAQGYALTCCSFARSDVTIRSVEEDELVGAQFS 165
            ++VTIEH G+S V+EV++  +IL  ALD  I++PHDCKLGVC+TCP+ +V+GE+DQSDG L D V AQGYAL C S+ RSD TIR + EDEL+  Q +
Sbjct:   46 YKVTIEHGGESRVVEVEEGETILSRALDEGIDVPHDCKLGVCMTCPARLVAGEVDQSDGMLSDDVVAQGYALLCASYPRSDCTIRVIPEDELLKVQLA 143
[Close]
BLAST of mRNA_P-littoralis_Contig1285.1.2 vs. uniprot
Match: J3LRB4_ORYBR (Ferredoxin n=1 Tax=Oryza brachyantha TaxID=4533 RepID=J3LRB4_ORYBR)

HSP 1 Score: 125 bits (315), Expect = 7.720e-34
Identity = 58/98 (59.18%), Postives = 76/98 (77.55%), Query Frame = 0 
Query:   68 HQVTIEHEGKSTVLEVDDNTSILDAALDNDIELPHDCKLGVCLTCPSIVVSGEIDQSDGTLEDSVTAQGYALTCCSFARSDVTIRSVEEDELVGAQFS 165
            ++VTIEH G+S V+EV ++ +IL  ALD  I++PHDCKLGVC+TCP+ +V+GE+DQSDG L D V AQGYAL C S+ RSD TIR + EDEL+  Q +
Sbjct:   51 YRVTIEHGGESRVVEVGEDETILSRALDEGIDVPHDCKLGVCMTCPARLVAGEVDQSDGMLSDDVVAQGYALLCASYPRSDCTIRVIPEDELLQVQLA 148
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1285.1.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KV05_9PHAE6.230e-7976.652Fe-2S ferredoxin-type domain-containing protein n... [more]
A0A7S3UW21_HETAK2.300e-4881.00Ferredoxin n=1 Tax=Heterosigma akashiwo TaxID=2829... [more]
A0A836CGC2_9STRA2.280e-4671.432Fe-2S ferredoxin-type domain-containing protein n... [more]
A0A7S2V4F7_9STRA2.470e-4556.33Ferredoxin n=1 Tax=Fibrocapsa japonica TaxID=94617... [more]
A0A482SDV3_9ARCH1.960e-4271.432Fe-2S iron-sulfur cluster binding domain-containi... [more]
A0A5K0VF29_9MAGN3.270e-3554.24Ferredoxin n=2 Tax=Nymphaea colorata TaxID=210225 ... [more]
A0A8J5WV81_ZIZPA2.150e-3458.162Fe-2S ferredoxin-type domain-containing protein n... [more]
UPI001ADA50ED2.870e-3454.78ferredoxin C 1, chloroplastic n=1 Tax=Oryza brachy... [more]
Q850T5_ORYSJ3.320e-3459.18Ferredoxin n=11 Tax=Oryza TaxID=4527 RepID=Q850T5_... [more]
J3LRB4_ORYBR7.720e-3459.18Ferredoxin n=1 Tax=Oryza brachyantha TaxID=4533 Re... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR0010412Fe-2S ferredoxin-type iron-sulfur binding domainPFAMPF00111Fer2coord: 73..145
e-value: 2.5E-13
score: 49.8
IPR0010412Fe-2S ferredoxin-type iron-sulfur binding domainPROSITEPS510852FE2S_FER_2coord: 68..157
score: 12.275946
IPR0010412Fe-2S ferredoxin-type iron-sulfur binding domainCDDcd00207fer2coord: 70..152
e-value: 2.72956E-21
score: 80.902
IPR012675Beta-grasp domain superfamilyGENE3D3.10.20.30coord: 65..166
e-value: 8.4E-25
score: 88.4
NoneNo IPR availablePANTHERPTHR43112:SF9FERREDOXIN C 1, CHLOROPLASTICcoord: 47..163
NoneNo IPR availablePANTHERPTHR43112FERREDOXINcoord: 47..163
IPR0360102Fe-2S ferredoxin-like superfamilySUPERFAMILY542922Fe-2S ferredoxin-likecoord: 47..159

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1285contigP-littoralis_Contig1285:7999..16050 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1285.1.2mRNA_P-littoralis_Contig1285.1.2Pylaiella littoralis U1_48mRNAP-littoralis_Contig1285 7079..16207 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig1285.1.2 ID=prot_P-littoralis_Contig1285.1.2|Name=mRNA_P-littoralis_Contig1285.1.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=169bp
MRGVDAWTTGLAVLALMGVTQGFVPYGAPAVRSASRSWGSSSSSANTKRA
RATIKVPARRAVSGMQMHQVTIEHEGKSTVLEVDDNTSILDAALDNDIEL
PHDCKLGVCLTCPSIVVSGEIDQSDGTLEDSVTAQGYALTCCSFARSDVT
IRSVEEDELVGAQFSDRQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR0010412Fe-2S_ferredoxin-type
IPR012675Beta-grasp_dom_sf
IPR0360102Fe-2S_ferredoxin-like_sf