mRNA_P-littoralis_Contig1284.17.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig1284.17.1 vs. uniprot
Match: A0A6H5JXZ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXZ6_9PHAE) HSP 1 Score: 246 bits (629), Expect = 7.260e-75 Identity = 142/309 (45.95%), Postives = 173/309 (55.99%), Query Frame = 1
Query: 283 ERKGPHCMMRLVGILVEDDVRPLLIDSRLQANRAQLDASAVGSRSEVWQVASERFTDPDHEVTPVEGEHPLRR**RWHEYVMCQLVLLRCTQ*AVCIHCFVFITAVPGAGLTPVGHRHPDSCSTDTREISPAPCT*YLSLFNRSLPTLKVRRIVDHEMVAHCDPNVIHQPNISAEKLSKMWAGVKAKWNQPHANWRGTSGNNQPWVNFCQGDSDIFLVGEAIKKYPELDQVCNALLPEDVQREDDGTGAAAGEAGGAERRASAKREGERLHGMNRAGKKKAKKDERAQSVADATEKAVSSAIAGMAPLL 1209
ERKGPHCMMRLVG+L ED +RPL+I+SRLQA R +LD SAVG R +W ++RF DP H V R+IVD E V+H +PN+I QPNISAEK++KMW+ KAKWN P ANW+ SGNNQPW++FCQGD+D +++G AI+KYPELDQVCN LLPED QREDDGTG G GGAERRA+AKREG RL+ NR G K+ KK R QSVA+AT A+ +A+ + PLL
Sbjct: 39 ERKGPHCMMRLVGMLCEDSIRPLVINSRLQATRQELDTSAVGPRKHLWTEVTDRFRDPRHNV----------------------------------------------------------------------------------------RKIVDDEQVSHVNPNIIQQPNISAEKITKMWSAAKAKWNTPIANWKSESGNNQPWLSFCQGDTDTYILGCAIEKYPELDQVCNNLLPEDAQREDDGTGEGDGCTGGAERRAAAKREGARLYEQNRRGTKQ-KKQGRRQSVAEATSVAMKTALLDIEPLL 258
BLAST of mRNA_P-littoralis_Contig1284.17.1 vs. uniprot
Match: D7FJ39_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ39_ECTSI) HSP 1 Score: 248 bits (633), Expect = 1.840e-74 Identity = 145/309 (46.93%), Postives = 173/309 (55.99%), Query Frame = 1
Query: 283 ERKGPHCMMRLVGILVEDDVRPLLIDSRLQANRAQLDASAVGSRSEVWQVASERFTDPDHEVTPVEGEHPLRR**RWHEYVMCQLVLLRCTQ*AVCIHCFVFITAVPGAGLTPVGHRHPDSCSTDTREISPAPCT*YLSLFNRSLPTLKVRRIVDHEMVAHCDPNVIHQPNISAEKLSKMWAGVKAKWNQPHANWRGTSGNNQPWVNFCQGDSDIFLVGEAIKKYPELDQVCNALLPEDVQREDDGTGAAAGEAGGAERRASAKREGERLHGMNRAGKKKAKKDERAQSVADATEKAVSSAIAGMAPLL 1209
ERKGPHCMMRLVGIL ED +RPLLI+SRLQA R LD S+VG R+E+W + RF DPDH+V R+IVD E V+H DPN+I QPNISAEKLS+MWA KAKWNQP+A+W+ SGNNQPW++FCQG +D +++G AI+KYPEL+QVCN LLPE QREDDGTG GGA+RRA+AKREG RLH NR GKK+ K QSVA+AT A+ +AI M PLL
Sbjct: 176 ERKGPHCMMRLVGILCEDAIRPLLIESRLQATRQDLDTSSVGPRNELWTEVTARFRDPDHQV----------------------------------------------------------------------------------------RKIVDDEQVSHVDPNIIQQPNISAEKLSRMWATAKAKWNQPYADWKSESGNNQPWLSFCQGCTDTYVLGCAIEKYPELNQVCNNLLPEGAQREDDGTGEGIVGTGGADRRAAAKREGARLHEQNRRGKKQKNKGV-GQSVAEATSAAMKTAIKDMEPLL 395
BLAST of mRNA_P-littoralis_Contig1284.17.1 vs. uniprot
Match: A0A6H5JZX9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZX9_9PHAE) HSP 1 Score: 241 bits (616), Expect = 4.930e-71 Identity = 163/366 (44.54%), Postives = 198/366 (54.10%), Query Frame = 1
Query: 112 GREYNVADLFAIMDAEDAVEAAAEGGGSSESGATGSCGGTXXXXXXXXXXXXXXGTAERKGPHCMMRLVGILVEDDVRPLLIDSRLQANRAQLDASAVGSRSEVWQVASERFTDPDHEVTPVEGEHPLRR**RWHEYVMCQLVLLRCTQ*AVCIHCFVFITAVPGAGLTPVGHRHPDSCSTDTREISPAPCT*YLSLFNRSLPTLKVRRIVDHEMVAHCDPNVIHQPNISAEKLSKMWAGVKAKWNQPHANWRGTSGNNQPWVNFCQGDSDIFLVGEAIKKYPELDQVCNALLPEDVQREDDGTGAAAGEAGGAERRASAKREGERLHGMNRAGKKKAKKDERAQSVADATEKAVSSAIAGMAPLL 1209
G +Y+VADL+ M+ E+ E GG XXXXXXXXXXXX ERKGPHCMMRLVGIL ED +RPL+I+SRLQA R +LD SAVG R +W ++RF DP H V R+IVD E V+H +PN+I QPNISAEK++KMW+ KAKWN P+ANW+ SGNNQPW++FCQGD+D +++G AI+KYPELDQVCN LP D QREDDGTG G GGAERRASAKREG RL NR G K+ KK Q+VA+AT A+ +A+ + PLL
Sbjct: 147 GVDYSVADLYDAMEKENTPELEDSAGGXXXXX-------XXXXXXXXXXXXXSGSITERKGPHCMMRLVGILCEDSIRPLVINSRLQATRQELDTSAVGPRKHLWTEVTDRFRDPRHHV----------------------------------------------------------------------------------------RKIVDDEQVSHVNPNIIQQPNISAEKITKMWSAAKAKWNTPNANWKSESGNNQPWLSFCQGDTDTYILGCAIEKYPELDQVCNNPLPVDAQREDDGTGEGDGCTGGAERRASAKREGARLDEQNRRGTKQKKKGG-GQNVAEATSVAMKTALLDIEPLL 416
BLAST of mRNA_P-littoralis_Contig1284.17.1 vs. uniprot
Match: A0A6H5KNY9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNY9_9PHAE) HSP 1 Score: 237 bits (604), Expect = 2.390e-69 Identity = 139/309 (44.98%), Postives = 171/309 (55.34%), Query Frame = 1
Query: 283 ERKGPHCMMRLVGILVEDDVRPLLIDSRLQANRAQLDASAVGSRSEVWQVASERFTDPDHEVTPVEGEHPLRR**RWHEYVMCQLVLLRCTQ*AVCIHCFVFITAVPGAGLTPVGHRHPDSCSTDTREISPAPCT*YLSLFNRSLPTLKVRRIVDHEMVAHCDPNVIHQPNISAEKLSKMWAGVKAKWNQPHANWRGTSGNNQPWVNFCQGDSDIFLVGEAIKKYPELDQVCNALLPEDVQREDDGTGAAAGEAGGAERRASAKREGERLHGMNRAGKKKAKKDERAQSVADATEKAVSSAIAGMAPLL 1209
ERKGPHCMMRLVG+L ED +RPL+I+SRLQA R +LD SAVG R +W ++RF DP H V R VD E+V+H +PN+I QPNISAEK++KMW+ KAKWN P+ANW+ SGNNQPW++FCQGD+D +++G AI+KYPELDQVCN LLPED QREDDGTG G GGAER A+AKREG RL+ NR G + KK R QSVA+AT A+ +A+ + PLL
Sbjct: 203 ERKGPHCMMRLVGMLCEDSIRPLVINSRLQATRQELDNSAVGPRKHLWTEVTDRFRDPRHNV----------------------------------------------------------------------------------------RISVDDELVSHVNPNIIQQPNISAEKITKMWSAAKAKWNTPNANWKRESGNNQPWLSFCQGDTDTYILGCAIEKYPELDQVCNNLLPEDAQREDDGTGDGNGCTGGAERLAAAKREGARLYEQNRRGTMQKKKGGR-QSVAEATSVAMKTALLEVEPLL 422
BLAST of mRNA_P-littoralis_Contig1284.17.1 vs. uniprot
Match: A0A6H5KKV3_9PHAE (Uncharacterized protein n=4 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KKV3_9PHAE) HSP 1 Score: 241 bits (615), Expect = 6.720e-69 Identity = 141/309 (45.63%), Postives = 172/309 (55.66%), Query Frame = 1
Query: 283 ERKGPHCMMRLVGILVEDDVRPLLIDSRLQANRAQLDASAVGSRSEVWQVASERFTDPDHEVTPVEGEHPLRR**RWHEYVMCQLVLLRCTQ*AVCIHCFVFITAVPGAGLTPVGHRHPDSCSTDTREISPAPCT*YLSLFNRSLPTLKVRRIVDHEMVAHCDPNVIHQPNISAEKLSKMWAGVKAKWNQPHANWRGTSGNNQPWVNFCQGDSDIFLVGEAIKKYPELDQVCNALLPEDVQREDDGTGAAAGEAGGAERRASAKREGERLHGMNRAGKKKAKKDERAQSVADATEKAVSSAIAGMAPLL 1209
ERKGPHCMMRLVGIL ED +RPLLI+SRLQA R LD S+VG R+++W + RF DPDH+V R+IVD + V+H DPN+I QPNISAEKLS+MWA KAKWNQP+ANW+ SGNNQPW++FCQG +D +++G AI+KYPEL+QVCN LLPE QREDDGTG GGA+RRA+AKREG RL+ NR GKK K QSVA+AT A+ +A+ + PLL
Sbjct: 411 ERKGPHCMMRLVGILCEDAIRPLLIESRLQATRQDLDTSSVGPRNDLWTEVTTRFRDPDHQV----------------------------------------------------------------------------------------RKIVDDQQVSHVDPNIIQQPNISAEKLSRMWATAKAKWNQPYANWKSESGNNQPWLSFCQGCTDTYVLGCAIEKYPELNQVCNNLLPEGAQREDDGTGEGIVCTGGADRRAAAKREGARLNEQNRRGKKPKNKGV-GQSVAEATSAAMKTALKDIEPLL 630
BLAST of mRNA_P-littoralis_Contig1284.17.1 vs. uniprot
Match: A0A6H5KFU0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFU0_9PHAE) HSP 1 Score: 238 bits (608), Expect = 1.210e-68 Identity = 162/366 (44.26%), Postives = 196/366 (53.55%), Query Frame = 1
Query: 112 GREYNVADLFAIMDAEDAVEAAAEGGGSSESGATGSCGGTXXXXXXXXXXXXXXGTAERKGPHCMMRLVGILVEDDVRPLLIDSRLQANRAQLDASAVGSRSEVWQVASERFTDPDHEVTPVEGEHPLRR**RWHEYVMCQLVLLRCTQ*AVCIHCFVFITAVPGAGLTPVGHRHPDSCSTDTREISPAPCT*YLSLFNRSLPTLKVRRIVDHEMVAHCDPNVIHQPNISAEKLSKMWAGVKAKWNQPHANWRGTSGNNQPWVNFCQGDSDIFLVGEAIKKYPELDQVCNALLPEDVQREDDGTGAAAGEAGGAERRASAKREGERLHGMNRAGKKKAKKDERAQSVADATEKAVSSAIAGMAPLL 1209
G +Y+V DL+ M+ E+ E GG XXXXXXXXXXXX ERKGPHCMMRLVGIL ED +RPL+I+SRLQA R +LD SAVG R +W ++RF DP H V R+IVD E V+H +PN+I QPNISAEK++KMW+ KAKWN P+ANW+ SGNNQPW++F QGD+D +++G AI+KYPELDQVCN LP D QREDDGTG G GGAERRASAKREG RL NR G K+ KK QSVA+AT A+ +A+ + PLL
Sbjct: 309 GMDYSVTDLYDAMEKENTPELEDSAGGXXXXX-------XXXXXXXXXXXXXSGSITERKGPHCMMRLVGILCEDSIRPLVINSRLQATRQELDTSAVGPRKHLWTEVTDRFRDPRHHV----------------------------------------------------------------------------------------RKIVDDEQVSHVNPNIIQQPNISAEKITKMWSAAKAKWNTPNANWKSESGNNQPWLSFAQGDTDTYILGCAIEKYPELDQVCNNPLPVDAQREDDGTGEGDGCTGGAERRASAKREGARLDEQNRRGTKQKKKGG-GQSVAEATSVAMKTALLDIEPLL 578
BLAST of mRNA_P-littoralis_Contig1284.17.1 vs. uniprot
Match: D7FU69_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU69_ECTSI) HSP 1 Score: 233 bits (595), Expect = 7.860e-68 Identity = 131/279 (46.95%), Postives = 154/279 (55.20%), Query Frame = 1
Query: 283 ERKGPHCMMRLVGILVEDDVRPLLIDSRLQANRAQLDASAVGSRSEVWQVASERFTDPDHEVTPVEGEHPLRR**RWHEYVMCQLVLLRCTQ*AVCIHCFVFITAVPGAGLTPVGHRHPDSCSTDTREISPAPCT*YLSLFNRSLPTLKVRRIVDHEMVAHCDPNVIHQPNISAEKLSKMWAGVKAKWNQPHANWRGTSGNNQPWVNFCQGDSDIFLVGEAIKKYPELDQVCNALLPEDVQREDDGTGAAAGEAGGAERRASAKREGERLHGMNRAGKK 1119
ERKGPHCMMRLVGIL ED +RPLLI+SRLQA R LD S+VG R+E+W + RF DPDH+V R+IVD E V+H DPN+I QPNISAEKLS+MWA KAKWNQP+ANW+ SGNNQPW++FCQG +D +++G AI+KYPEL+QVCN LLPE QREDD TG GGA+RRA+AKREG RLH NR GKK
Sbjct: 299 ERKGPHCMMRLVGILCEDAIRPLLIESRLQATRQDLDTSSVGPRNELWTEVTARFRDPDHQV----------------------------------------------------------------------------------------RKIVDDEQVSHVDPNIIQQPNISAEKLSRMWATAKAKWNQPYANWKSESGNNQPWLSFCQGCTDTYVLGCAIEKYPELNQVCNNLLPEGAQREDDWTGEGIVGTGGADRRAAAKREGARLHEQNRRGKK 489
BLAST of mRNA_P-littoralis_Contig1284.17.1 vs. uniprot
Match: A0A6H5KNM0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNM0_9PHAE) HSP 1 Score: 223 bits (569), Expect = 4.210e-61 Identity = 132/299 (44.15%), Postives = 163/299 (54.52%), Query Frame = 1
Query: 283 ERKGPHCMMRLVGILVEDDVRPLLIDSRLQANRAQLDASAVGSRSEVWQVASERFTDPDHEVTPVEGEHPLRR**RWHEYVMCQLVLLRCTQ*AVCIHCFVFITAVPGAGLTPVGHRHPDSCSTDTREISPAPCT*YLSLFNRSLPTLKVRRIVDHEMVAHCDPNVIHQPNISAEKLSKMWAGVKAKWNQPHANWRGT-SGNNQPWVNFCQGDSDIFLVGEAIKKYPELDQVCNALLPEDVQREDDGTGAAAGEAGGAERRASAKREGERLHGMNRAGKKKAKKDERAQSVADATEKAV 1176
ERKGPHCMMRL GIL ED +RP +I+SRLQA R +LD SAVG R +W ++RF DP H V R+IVD E +H +PN+I QP+I AEK++K W+ KAKWN P+ANW+ + SGNNQPW++FCQGD+D +++G AI+KYPELDQVCN LLPED QREDDGTG G GGAERRA+AKREG RL+ NR G K+ K+ R QSVA+AT A+
Sbjct: 733 ERKGPHCMMRLEGILCEDSIRPRVINSRLQATRQELDTSAVGPRKHLWTEVTDRFRDPRHNV----------------------------------------------------------------------------------------RKIVDDEQASHVNPNIIQQPDIFAEKITKTWSAAKAKWNTPNANWKKSESGNNQPWLSFCQGDTDTYILGCAIEKYPELDQVCNNLLPEDAQREDDGTGEGDGCTGGAERRAAAKREGARLYEQNRRGTKQKKEGGR-QSVAEATSVAM 942
BLAST of mRNA_P-littoralis_Contig1284.17.1 vs. uniprot
Match: A0A6H5KQ52_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ52_9PHAE) HSP 1 Score: 201 bits (510), Expect = 6.160e-57 Identity = 146/366 (39.89%), Postives = 181/366 (49.45%), Query Frame = 1
Query: 112 GREYNVADLFAIMDAEDAVEAAAEGGGSSESGATGSCGGTXXXXXXXXXXXXXXGTAERKGPHCMMRLVGILVEDDVRPLLIDSRLQANRAQLDASAVGSRSEVWQVASERFTDPDHEVTPVEGEHPLRR**RWHEYVMCQLVLLRCTQ*AVCIHCFVFITAVPGAGLTPVGHRHPDSCSTDTREISPAPCT*YLSLFNRSLPTLKVRRIVDHEMVAHCDPNVIHQPNISAEKLSKMWAGVKAKWNQPHANWRGTSGNNQPWVNFCQGDSDIFLVGEAIKKYPELDQVCNALLPEDVQREDDGTGAAAGEAGGAERRASAKREGERLHGMNRAGKKKAKKDERAQSVADATEKAVSSAIAGMAPLL 1209
G +Y+VADL+ M+ ED E +S XXXXXXXXXXXX ERKGPHCMMRLVGIL ED +RPL+I+SRLQA R +LD SAVG R +W ++RF DP H V R+IVD E V+H N+I QPNISAEK++ M + KAKWN P+ANW+ GNNQPW++FCQGD+D +++G A++KYPELDQVCN LLPED QREDD TG G + NR G K+ KK R QSVA+AT A+ +A+ + PLL
Sbjct: 23 GVDYSVADLYDAMEKEDKPEL-------EDSAGXXXXXXXXXXXXXXXXXXXSGNITERKGPHCMMRLVGILCEDSIRPLVINSRLQATRQELDTSAVGPRKNLWPEVTDRFRDPRHNV----------------------------------------------------------------------------------------RKIVDDEQVSHVIANIIQQPNISAEKITPMRSAAKAKWNTPNANWKSEPGNNQPWLSFCQGDTDTYILGCAVEKYPELDQVCNNLLPEDAQREDDRTGEGDG--------------WREAYEQNRRGTKQKKKGGR-QSVAEATSVAMKTALLDIEPLL 278
BLAST of mRNA_P-littoralis_Contig1284.17.1 vs. uniprot
Match: A0A6H5JSN7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSN7_9PHAE) HSP 1 Score: 197 bits (501), Expect = 5.510e-53 Identity = 147/364 (40.38%), Postives = 183/364 (50.27%), Query Frame = 1
Query: 118 EYNVADLFAIMDAEDAVEAAAEGGGSSESGATGSCGGTXXXXXXXXXXXXXXGTAERKGPHCMMRLVGILVEDDVRPLLIDSRLQANRAQLDASAVGSRSEVWQVASERFTDPDHEVTPVEGEHPLRR**RWHEYVMCQLVLLRCTQ*AVCIHCFVFITAVPGAGLTPVGHRHPDSCSTDTREISPAPCT*YLSLFNRSLPTLKVRRIVDHEMVAHCDPNVIHQPNISAEKLSKMWAGVKAKWNQPHANWRGTSGNNQPWVNFCQGDSDIFLVGEAIKKYPELDQVCNALLPEDVQREDDGTGAAAGEAGGAERRASAKREGERLHGMNRAGKKKAKKDERAQSVADATEKAVSSAIAGMAPLL 1209
+Y+VA+LF M+ ED E GGS+ +G GS XXXXXXXXXXXX ERKGPH MMRLVGI ED + PL I+SR+QA R +LD SAV R+ +W ++RF D H V R+IVD V+H +PN+I QPN SAEK++ W+ +A WN P+ANW SGNNQPWV+F QGD+D +++G A +KYPELDQVCN LLPED QREDDGTG GGAERR +AKREG RL N +SVA+A A+ +A+ + PLL
Sbjct: 282 DYSVANLFDAME-EDKPELGDSAGGSAPNG--GSSXXXXXXXXXXXXXXXSGSITERKGPHWMMRLVGIPCEDSIHPLAINSRMQATRQELDTSAVWPRNNLWTEVTDRFRDRGHNV----------------------------------------------------------------------------------------RKIVDDGQVSHVNPNIIQQPNRSAEKITNTWSAARANWNTPYANWTSESGNNQPWVSFSQGDTDTYILGCAFEKYPELDQVCNNLLPEDAQREDDGTGEGDACTGGAERRTAAKREGARLDEQNXXXXXXXXXXX-GKSVAEAMSVAMKTALLDIEPLL 553 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1284.17.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1284.17.1 >prot_P-littoralis_Contig1284.17.1 ID=prot_P-littoralis_Contig1284.17.1|Name=mRNA_P-littoralis_Contig1284.17.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=188bp MVAHCDPNVIHQPNISAEKLSKMWAGVKAKWNQPHANWRGTSGNNQPWVNback to top mRNA from alignment at P-littoralis_Contig1284:38190..40550- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig1284.17.1 ID=mRNA_P-littoralis_Contig1284.17.1|Name=mRNA_P-littoralis_Contig1284.17.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=2361bp|location=Sequence derived from alignment at P-littoralis_Contig1284:38190..40550- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig1284:38190..40550- >mRNA_P-littoralis_Contig1284.17.1 ID=mRNA_P-littoralis_Contig1284.17.1|Name=mRNA_P-littoralis_Contig1284.17.1|organism=Pylaiella littoralis U1_48|type=CDS|length=564bp|location=Sequence derived from alignment at P-littoralis_Contig1284:38190..40550- (Pylaiella littoralis U1_48)back to top |