prot_P-littoralis_Contig1283.5.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig1283.5.1
Unique Nameprot_P-littoralis_Contig1283.5.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length134
Homology
BLAST of mRNA_P-littoralis_Contig1283.5.1 vs. uniprot
Match: A0A6H5KQZ5_9PHAE (DDE_Tnp_1_7 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQZ5_9PHAE)

HSP 1 Score: 120 bits (300), Expect = 2.750e-29
Identity = 63/122 (51.64%), Postives = 72/122 (59.02%), Query Frame = 0
Query:    6 DLTVAELEELSAGLARMIKTERVDWDTRLACILMAKCGVGHKNKGGRRTYKEVPLYDSNGAKSVKVCRGGTCVKGDDPTARYKSKRTRGVCWCSICSNGLGKIRAVHLCKQCRASTQGHVAA 127
            DLTVAEL E    L + +K ERVDWD RLA  LM+ C VGH   G RR  K    Y  NGA S +VC G  C     P + Y   RTRG CWC IC+NGLGK RA+ LC +C    + HVAA
Sbjct:  356 DLTVAELREFQTLLKKAMKMERVDWDRRLANHLMSLCNVGHTENGARRATKPSESYLVNGACSSRVCHGRGCKT--PPGSPYAGTRTRGACWCDICTNGLGKDRALILCTKCHKVPEAHVAA 475          
BLAST of mRNA_P-littoralis_Contig1283.5.1 vs. uniprot
Match: A0A6H5KC21_9PHAE (DDE_Tnp_1_7 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC21_9PHAE)

HSP 1 Score: 115 bits (289), Expect = 3.460e-29
Identity = 62/121 (51.24%), Postives = 70/121 (57.85%), Query Frame = 0
Query:    7 LTVAELEELSAGLARMIKTERVDWDTRLACILMAKCGVGHKNKGGRRTYKEVPLYDSNGAKSVKVCRGGTCVKGDDPTARYKSKRTRGVCWCSICSNGLGKIRAVHLCKQCRASTQGHVAA 127
            LTVAEL E  + L + +K ERVDWD RLA  LM+ C VGH   G RR  K V  Y    AKS  VC GG C K     +RY   RTRGVCWC  C++GLGK RA+ LC  C      HV A
Sbjct:  128 LTVAELREFQS-LKKAMKVERVDWDRRLANHLMSLCSVGHTETGARRATKAVETYSVKDAKSSLVCYGGICEK-TAKASRYTGSRTRGVCWCDACTDGLGKDRALILCTMCHRVPAAHVTA 246          
BLAST of mRNA_P-littoralis_Contig1283.5.1 vs. uniprot
Match: A0A6H5JDZ7_9PHAE (DDE_Tnp_1_7 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDZ7_9PHAE)

HSP 1 Score: 105 bits (261), Expect = 1.140e-23
Identity = 57/122 (46.72%), Postives = 69/122 (56.56%), Query Frame = 0
Query:    6 DLTVAELEELSAGLARMIKTERVDWDTRLACILMAKCGVGHKNKGGRRTYKEVPLYDSNGAKSVKVCRGGTCVKGDDPTARYKSKRTRGVCWCSICSNGLGKIRAVHLCKQCRASTQGHVAA 127
            DLTVAEL E  + + + +K ERVDWD RLA  LM+ C V H      RT K V  Y   GAKS  VC GG C +     +R    RTR VCWC  C++GLGK RA+ LC +C      +V A
Sbjct:  473 DLTVAELREFQSLVKKAMKVERVDWDRRLANHLMSLCSVCHTETRASRTTKPVETYSVKGAKSSLVCYGGICEE-TAKASRCTGSRTRVVCWCDTCTDGLGKDRALILCTKCNKVPAANVTA 593          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1283.5.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KQZ5_9PHAE2.750e-2951.64DDE_Tnp_1_7 domain-containing protein n=1 Tax=Ecto... [more]
A0A6H5KC21_9PHAE3.460e-2951.24DDE_Tnp_1_7 domain-containing protein n=1 Tax=Ecto... [more]
A0A6H5JDZ7_9PHAE1.140e-2346.72DDE_Tnp_1_7 domain-containing protein n=1 Tax=Ecto... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1283contigP-littoralis_Contig1283:24411..24812 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1283.5.1mRNA_P-littoralis_Contig1283.5.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig1283 24411..24812 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig1283.5.1 ID=prot_P-littoralis_Contig1283.5.1|Name=mRNA_P-littoralis_Contig1283.5.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=134bp
MGGGGDLTVAELEELSAGLARMIKTERVDWDTRLACILMAKCGVGHKNKG
GRRTYKEVPLYDSNGAKSVKVCRGGTCVKGDDPTARYKSKRTRGVCWCSI
CSNGLGKIRAVHLCKQCRASTQGHVAAALEADRH
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