mRNA_P-littoralis_Contig1281.24.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig1281.24.1 vs. uniprot
Match: A0A6H5K7K1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7K1_9PHAE) HSP 1 Score: 132 bits (333), Expect = 8.870e-35 Identity = 58/86 (67.44%), Postives = 74/86 (86.05%), Query Frame = 1
Query: 1 VSFSRYHPECNAIERVWGHSKAIGRRVCDYSVKSLLKRLPATLSSMSLSLIRKWARISWLHVEAYATGLDGYMQYRDLKKWTSHRS 258
+ ++YHPE NAIER WG++K+I RRVCDYSV SLL RLP TLS+++LSL RKWAR+SWL++ AY+ GL+GY+Q RDLKKWT+HRS
Sbjct: 373 IFLAKYHPELNAIERFWGYTKSIERRVCDYSVLSLLARLPMTLSTVTLSLCRKWARVSWLYIYAYSHGLEGYLQTRDLKKWTNHRS 458
BLAST of mRNA_P-littoralis_Contig1281.24.1 vs. uniprot
Match: A0A6H5L7W4_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7W4_9PHAE) HSP 1 Score: 134 bits (336), Expect = 1.750e-34 Identity = 59/86 (68.60%), Postives = 74/86 (86.05%), Query Frame = 1
Query: 1 VSFSRYHPECNAIERVWGHSKAIGRRVCDYSVKSLLKRLPATLSSMSLSLIRKWARISWLHVEAYATGLDGYMQYRDLKKWTSHRS 258
+ ++YHPE NAIER WG++K+I RRVCDYSV SLL RLP TLS++SLSL RKWAR+SWL++ AY+ GL+GY+Q RDLKKWT+HRS
Sbjct: 1014 IFLAKYHPELNAIERFWGYTKSIERRVCDYSVLSLLARLPMTLSTVSLSLCRKWARVSWLYIYAYSHGLEGYLQTRDLKKWTNHRS 1099
BLAST of mRNA_P-littoralis_Contig1281.24.1 vs. uniprot
Match: A0A6H5K2M3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2M3_9PHAE) HSP 1 Score: 132 bits (333), Expect = 3.870e-34 Identity = 58/86 (67.44%), Postives = 74/86 (86.05%), Query Frame = 1
Query: 1 VSFSRYHPECNAIERVWGHSKAIGRRVCDYSVKSLLKRLPATLSSMSLSLIRKWARISWLHVEAYATGLDGYMQYRDLKKWTSHRS 258
+ ++YHPE NAI+R WG++K+I RRVCDYSV SLL RLP TLS++SLSL RKWAR+SWL++ AY+ GL+GY+Q RDLKKWT+HRS
Sbjct: 566 IFLAKYHPELNAIQRFWGYTKSIERRVCDYSVLSLLARLPMTLSTVSLSLCRKWARVSWLYIYAYSHGLEGYLQTRDLKKWTNHRS 651
BLAST of mRNA_P-littoralis_Contig1281.24.1 vs. uniprot
Match: A0A6H5K8V9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8V9_9PHAE) HSP 1 Score: 115 bits (288), Expect = 9.460e-29 Identity = 51/73 (69.86%), Postives = 64/73 (87.67%), Query Frame = 1
Query: 40 ERVWGHSKAIGRRVCDYSVKSLLKRLPATLSSMSLSLIRKWARISWLHVEAYATGLDGYMQYRDLKKWTSHRS 258
+R WG++K+I RRVCDYSV SLL RLP TLS++SLSL RKWAR+SWL++ AY+ GL+GY+Q RDLKKWT+HRS
Sbjct: 256 QRFWGYTKSIERRVCDYSVLSLLARLPMTLSTVSLSLCRKWARVSWLYIYAYSHGLEGYLQTRDLKKWTNHRS 328
BLAST of mRNA_P-littoralis_Contig1281.24.1 vs. uniprot
Match: A0A6H5K344_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K344_9PHAE) HSP 1 Score: 101 bits (251), Expect = 4.110e-23 Identity = 45/68 (66.18%), Postives = 57/68 (83.82%), Query Frame = 1
Query: 1 VSFSRYHPECNAIERVWGHSKAIGRRVCDYSVKSLLKRLPATLSSMSLSLIRKWARISWLHVEAYATG 204
+ ++YHPE NAIER WG++K+I RRVCDYSV SLL RLP TLS++SLSL RKWAR+SWL++ AY+ G
Sbjct: 449 IFLAKYHPELNAIERFWGYTKSIERRVCDYSVLSLLARLPMTLSTVSLSLCRKWARVSWLYIYAYSHG 516
BLAST of mRNA_P-littoralis_Contig1281.24.1 vs. uniprot
Match: A0A1S8VDY8_9FUNG (Uncharacterized protein (Fragment) n=1 Tax=Batrachochytrium salamandrivorans TaxID=1357716 RepID=A0A1S8VDY8_9FUNG) HSP 1 Score: 67.8 bits (164), Expect = 1.030e-11 Identity = 38/91 (41.76%), Postives = 52/91 (57.14%), Query Frame = 1
Query: 7 FSRYHPECNAIERVWGHSKAIGRRVCDYSVKSLLKRLPATLSSMSLSLIRKWARISWLHVEAY------ATGLDGYMQYRDLKKWTSHRSL 261
+ +YH E N IE WG +K RR CDYS K L LPA L+S+SL+LIRK+AR + +++AY GL +KK+ HR +
Sbjct: 135 YPKYHCEFNFIELYWGAAKRYSRRNCDYSFKGLELVLPAALNSVSLTLIRKYARKCFRYMDAYRARNDIGNGLTMEQVEYAMKKYAGHRRI 225
BLAST of mRNA_P-littoralis_Contig1281.24.1 vs. uniprot
Match: A0A6G0XKN8_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XKN8_9STRA) HSP 1 Score: 63.2 bits (152), Expect = 1.250e-9 Identity = 33/85 (38.82%), Postives = 51/85 (60.00%), Query Frame = 1
Query: 7 FSRYHPECNAIERVWGHSKAIGRRVCDYSVKSLLKRLPATLSSMSLSLIRKWARISWLHVEAYATGLDGYMQYRDLKKWTSHRSL 261
+ +YH E N IE WG +K R+ CD S L++ +PA+LSS+ LS IRK+ R +++AY G++ M K++ SHR +
Sbjct: 505 YPKYHCELNPIESYWGAAKRYARQHCDCSWNGLVRCVPASLSSVPLSSIRKFFRRCSHYIQAYNDGINFAMTKYAHKQYKSHRRI 589
BLAST of mRNA_P-littoralis_Contig1281.24.1 vs. uniprot
Match: A0A6H5KGB3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGB3_9PHAE) HSP 1 Score: 57.8 bits (138), Expect = 9.690e-8 Identity = 24/35 (68.57%), Postives = 30/35 (85.71%), Query Frame = 1
Query: 1 VSFSRYHPECNAIERVWGHSKAIGRRVCDYSVKSL 105
+ ++YHPE NAIER WG++KAI RRVCDYSV+SL
Sbjct: 426 IFLAKYHPELNAIERFWGYTKAIERRVCDYSVQSL 460
BLAST of mRNA_P-littoralis_Contig1281.24.1 vs. uniprot
Match: A0A6H5K7V1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7V1_9PHAE) HSP 1 Score: 51.2 bits (121), Expect = 1.990e-5 Identity = 22/48 (45.83%), Postives = 33/48 (68.75%), Query Frame = 1
Query: 25 ECNAIERVWGHSKAIGRRVCDYSVKSLLKRLPATLSSMSLSLIRKWAR 168
E N IE VWG SK + R++CDY K++LK +P + + M ++LI K+ R
Sbjct: 140 EINPIELVWGRSKYMVRKLCDYKTKTMLKSIPLSYAWMDVALIEKYVR 187
BLAST of mRNA_P-littoralis_Contig1281.24.1 vs. uniprot
Match: A0A2Z6QSM2_9GLOM (Uncharacterized protein n=1 Tax=Rhizophagus clarus TaxID=94130 RepID=A0A2Z6QSM2_9GLOM) HSP 1 Score: 48.9 bits (115), Expect = 3.730e-5 Identity = 25/58 (43.10%), Postives = 34/58 (58.62%), Query Frame = 1
Query: 1 VSFSRYHPECNAIERVWGHSKAIGRRVCDYSVKSLLKRLPATLSSMSLSLIRKWARIS 174
+ + +YH E N IE W K R C+Y+ SL K +P L S+SL +IRK+AR S
Sbjct: 81 IFYPKYHCELNYIEMYWEAVKRYTRENCNYTWSSLQKTVPEALDSISLIIIRKFARKS 138 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1281.24.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1281.24.1 >prot_P-littoralis_Contig1281.24.1 ID=prot_P-littoralis_Contig1281.24.1|Name=mRNA_P-littoralis_Contig1281.24.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=90bp VSFSRYHPECNAIERVWGHSKAIGRRVCDYSVKSLLKRLPATLSSMSLSLback to top mRNA from alignment at P-littoralis_Contig1281:34690..34959+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig1281.24.1 ID=mRNA_P-littoralis_Contig1281.24.1|Name=mRNA_P-littoralis_Contig1281.24.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=270bp|location=Sequence derived from alignment at P-littoralis_Contig1281:34690..34959+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig1281:34690..34959+ >mRNA_P-littoralis_Contig1281.24.1 ID=mRNA_P-littoralis_Contig1281.24.1|Name=mRNA_P-littoralis_Contig1281.24.1|organism=Pylaiella littoralis U1_48|type=CDS|length=270bp|location=Sequence derived from alignment at P-littoralis_Contig1281:34690..34959+ (Pylaiella littoralis U1_48)back to top |