mRNA_P-littoralis_Contig1280.11.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig1280.11.1 vs. uniprot
Match: A0A6H5K2M3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2M3_9PHAE) HSP 1 Score: 198 bits (503), Expect = 6.280e-57 Identity = 115/221 (52.04%), Postives = 129/221 (58.37%), Query Frame = 1
Query: 4 QAILAAFELSREPGRQMLAVFDNSTGHAAFSPDALRAQNIAAGVGGEQAIPKDFEYDGRTIYTTFREGDVL-----------------------------IGVAKGMKEILEDMKLYRLLGEKKAPLL--------------------------------------------DGGGAHGSGSSRRCCCRWIISQVQAFKDQMNRVEELFEAAGHVCIFLAK 447
+AI AAFE+SREPGRQMLAVFDNSTGH A+SPDALRAQNI A GGEQ P++FEY+GRTIYTTFREGDVL IGVAKGMKEILEDM LY+L E KAP L +GG + +SRRCCC+ IIS+V+AFK+QMNRVEELFEAAGH CIFLAK
Sbjct: 350 EAIFAAFEISREPGRQMLAVFDNSTGHNAYSPDALRAQNIRASPGGEQIPPRNFEYNGRTIYTTFREGDVLCFRSSPFARKTEAEAVGTVVKRGTSSEKLIGVAKGMKEILEDMGLYKLASETKAPPLLCQRCKDEAKAKRDKSTMYNKGGESRQQALEGEGDSDDSDXXSEEGGARDAARTSRRCCCQRIISEVKAFKEQMNRVEELFEAAGHACIFLAK 570
BLAST of mRNA_P-littoralis_Contig1280.11.1 vs. uniprot
Match: A0A6H5K344_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K344_9PHAE) HSP 1 Score: 192 bits (489), Expect = 2.680e-56 Identity = 115/235 (48.94%), Postives = 129/235 (54.89%), Query Frame = 1
Query: 4 QAILAAFELSREPGRQMLAVFDNSTGHAAFSPDALRAQNIAAGVGGEQAIPKDFEYDGRTIYTTFREGDVL-------------------------------------------IGVAKGMKEILEDMKLYRLLGEKKAPLL--------------------------------------------DGGGAHGSGSSRRCCCRWIISQVQAFKDQMNRVEELFEAAGHVCIFLAK 447
+AI AAFE+SREPGRQMLAVFDNSTGH A+SPDALRAQNI A GGEQ P++FEY+GRTIYTTFREGDVL IGVAKGMKEILEDM LY+L E KAP L +GG + +SRRCCC+ IIS+V+AFK+QMNRVEELFEAAGH CIFLAK
Sbjct: 219 EAIFAAFEISREPGRQMLAVFDNSTGHNAYSPDALRAQNIRASPGGEQIPPRNFEYNGRTIYTTFREGDVLCFRSSPFARKTEAEAVAKKRHGKRLGVFPIGTVVKRGTSSEKLIGVAKGMKEILEDMGLYKLASETKAPPLLCQRCKDEAKAKRDKSTMYNKGGESRQQALEGEGDSDDSDXXSEEGGARDAARTSRRCCCQRIISEVKAFKEQMNRVEELFEAAGHACIFLAK 453
BLAST of mRNA_P-littoralis_Contig1280.11.1 vs. uniprot
Match: A0A6H5L7W4_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7W4_9PHAE) HSP 1 Score: 192 bits (489), Expect = 4.630e-54 Identity = 115/235 (48.94%), Postives = 129/235 (54.89%), Query Frame = 1
Query: 4 QAILAAFELSREPGRQMLAVFDNSTGHAAFSPDALRAQNIAAGVGGEQAIPKDFEYDGRTIYTTFREGDVL-------------------------------------------IGVAKGMKEILEDMKLYRLLGEKKAPLL--------------------------------------------DGGGAHGSGSSRRCCCRWIISQVQAFKDQMNRVEELFEAAGHVCIFLAK 447
+AI AAFE+SREPGRQMLAVFDNSTGH A+SPDALRAQNI A GGEQ P++FEY+GRTIYTTFREGDVL IGVAKGMKEILEDM LY+L E KAP L +GG + +SRRCCC+ IIS+V+AFK+QMNRVEELFEAAGH CIFLAK
Sbjct: 784 EAIFAAFEISREPGRQMLAVFDNSTGHNAYSPDALRAQNIRASPGGEQIPPRNFEYNGRTIYTTFREGDVLCFRSSPFARKTEAEAVAKKRHGKRLGVFPIGTVVKRGTSSEKLIGVAKGMKEILEDMGLYKLASETKAPPLLCQRCKDEAKAKRDKSTMYNKGGESRQQALEGEGDSDDSDXXSEEGGARDAARTSRRCCCQRIISEVKAFKEQMNRVEELFEAAGHACIFLAK 1018
BLAST of mRNA_P-littoralis_Contig1280.11.1 vs. uniprot
Match: A0A6H5KGB3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGB3_9PHAE) HSP 1 Score: 185 bits (469), Expect = 9.790e-54 Identity = 113/233 (48.50%), Postives = 126/233 (54.08%), Query Frame = 1
Query: 7 AILAAFELSREPGRQMLAVFDNSTGHAAFSPDALRAQNIAAGVGGEQAIPKDFEYDGRTIYTTFREGDVL-------------------------------------------IGVAKGMKEILEDMKLYRLLGEKKAPLLD--------------------GGGAHGS-----------------------GSSRRCCCRWIISQVQAFKDQMNRVEELFEAAGHVCIFLAK 447
AI AAFELSREPGRQML VFDNSTGH AFSPDALRAQNIA GGEQ P FEY+GRTIYTTF+ GD L +G+AKGMKEILEDM+LY+L GE K P L+ GG + G+SRRCCCR IIS+V+AF++QMNRVEELFEAAGHVCIFLAK
Sbjct: 198 AIFAAFELSREPGRQMLMVFDNSTGHNAFSPDALRAQNIALSAGGEQVPPHSFEYNGRTIYTTFQLGDKLRFKTAPFARKTEEEKTAKKRNGKKLGVFPIGTVIRQGTPSEKLVGIAKGMKEILEDMELYKLDGESKPPKLECQRCLDEAKAKRDKSKMYNKGGESRQQALADNEDSDXXXXXXXXXXXXTDGTSRRCCCRRIISEVKAFQEQMNRVEELFEAAGHVCIFLAK 430
BLAST of mRNA_P-littoralis_Contig1280.11.1 vs. uniprot
Match: A0A6H5JDB4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDB4_9PHAE) HSP 1 Score: 189 bits (479), Expect = 1.270e-53 Identity = 113/235 (48.09%), Postives = 127/235 (54.04%), Query Frame = 1
Query: 4 QAILAAFELSREPGRQMLAVFDNSTGHAAFSPDALRAQNIAAGVGGEQAIPKDFEYDGRTIYTTFREGDVL-------------------------------------------IGVAKGMKEILEDMKLYRLLGEKKAPLL--------------------------------------------DGGGAHGSGSSRRCCCRWIISQVQAFKDQMNRVEELFEAAGHVCIFLAK 447
+AI AAFE+SREPGRQMLAVFDNSTGH A+SPDALRAQNI A GGEQ P++FEY+GRTIYTTFREGDVL IGVAKGMKEILEDM LY+L E KAP L +GG + +SRRCCC+ IIS+V+ FK+QMNRVEEL EAAGH CIFLAK
Sbjct: 426 EAIFAAFEISREPGRQMLAVFDNSTGHNAYSPDALRAQNIRASPGGEQIPPRNFEYNGRTIYTTFREGDVLCFRSSPFARKTEAEAVAKKRHGKRLGVFPIGTVVKRGTSSEKLIGVAKGMKEILEDMGLYKLASETKAPPLLCQRCKDEAKAKRDKSTMYNKGGESRQQALEGEGDSDDSDXXSEEGGARDAARTSRRCCCQRIISEVKTFKEQMNRVEELLEAAGHACIFLAK 660
BLAST of mRNA_P-littoralis_Contig1280.11.1 vs. uniprot
Match: A0A6H5K7K1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7K1_9PHAE) HSP 1 Score: 176 bits (447), Expect = 2.290e-50 Identity = 113/269 (42.01%), Postives = 128/269 (47.58%), Query Frame = 1
Query: 4 QAILAAFELSREPGRQMLAVFDNSTGHAAFSPDALRAQNIAAGVGGEQAIPKDFEYDGRTIYTTFREGDVL-----------------------------IGVAKGMKEILEDMKLYRLLGEKKAPLL--------------------------------------------------------------------------------------------DGGGAHGSGSSRRCCCRWIISQVQAFKDQMNRVEELFEAAGHVCIFLAK 447
+AI AAFE+SR+PGRQML VFDNSTGH A+SPDALRAQNI A GGEQ P++FEY+GRTIYTTFREGDVL IGVAKGMKEILEDM LY+L E KAP L +GG + +SRRCCC+ IIS+V+AFK+QMNRVEELFEAAGH CIFLAK
Sbjct: 109 EAIFAAFEISRQPGRQMLEVFDNSTGHNAYSPDALRAQNIRASPGGEQIPPRNFEYNGRTIYTTFREGDVLCFRSSPFARKTEAEAVGTVVKRGTSSEKLIGVAKGMKEILEDMGLYKLASETKAPPLLCQRWDHWFSFLFQGLKCRRALHASFEVDVLFEVSSAFSLELYSAAMHLDSRCKDEAKAKRDKSTMYNKGGESRQQALEGEGDSDDSDXXSEEGGARDAARTSRRCCCQRIISEVKAFKEQMNRVEELFEAAGHACIFLAK 377
BLAST of mRNA_P-littoralis_Contig1280.11.1 vs. uniprot
Match: A0A6H5K8V9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8V9_9PHAE) HSP 1 Score: 119 bits (299), Expect = 2.340e-29 Identity = 58/71 (81.69%), Postives = 64/71 (90.14%), Query Frame = 1
Query: 4 QAILAAFELSREPGRQMLAVFDNSTGHAAFSPDALRAQNIAAGVGGEQAIPKDFEYDGRTIYTTFREGDVL 216
+AI AAFE+SREPGRQMLAVFDNSTGH A+SPDALRAQNI A GGEQ P++FEY+GRTIYTTFREGDVL
Sbjct: 160 EAIFAAFEISREPGRQMLAVFDNSTGHNAYSPDALRAQNIRASPGGEQIPPRNFEYNGRTIYTTFREGDVL 230
BLAST of mRNA_P-littoralis_Contig1280.11.1 vs. uniprot
Match: A0A6A4Z5M9_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4Z5M9_9STRA) HSP 1 Score: 87.8 bits (216), Expect = 2.370e-17 Identity = 57/154 (37.01%), Postives = 81/154 (52.60%), Query Frame = 1
Query: 1 QQAILAAFELSREPGRQMLAVFDNSTGHAAFSPDALRAQNIAAGVGGEQAIPKDFEY-DGRTIYTTFREGDVLIGVAKGMKEIL----EDMKLYRLLGEKKAPLLDGGGAHGSGSSRRCCCRWIISQVQAFKDQMNRVEELFEAAGHVCIFLAK 447
Q+ ++AAF PG + FD ST HAAF+PDALRA N++ GG QA+ + DG T F E G AKG++++L D+KL ++ K LD G R CC R ++ + F+ Q++ +EE AGH+C FL K
Sbjct: 418 QEEVVAAFN-EMHPGAKGHFTFDQSTNHAAFAPDALRASNMSLKPGGAQALLRPGRLLDGTTQSMVFEENHTRSGEAKGLQQVLLERGYDVKLLKMSLFCKQTHLDTC----QGDVRMCCARHCMASQEDFRAQLSLLEETIIRAGHICAFLPK 566
BLAST of mRNA_P-littoralis_Contig1280.11.1 vs. uniprot
Match: A0A0C3GHR2_PILCF (Uncharacterized protein (Fragment) n=1 Tax=Piloderma croceum (strain F 1598) TaxID=765440 RepID=A0A0C3GHR2_PILCF) HSP 1 Score: 83.2 bits (204), Expect = 4.450e-17 Identity = 56/153 (36.60%), Postives = 76/153 (49.67%), Query Frame = 1
Query: 10 ILAAFELSREPGRQMLAVFDNSTGHAAFSPDALRAQNIAAGVGGEQAIPKD--FEYDGRTIYTTF---REGDVLIGVAKGMKEILEDMKLY--RLLGEKKAPLLDGGGAHGSGSSRRCCCRWIISQVQAFKDQMNRVEELFEAAGHVCIFLAK 447
I+ FE PG Q L + D+S GHAA+ PDALR + GG Q +D F DG I + KG+K +LE+ L+ RL E K P + G CC R ++ Q F++Q + V+E+ EAAGH+CIFL K
Sbjct: 1 IIPTFEKVHGPGYQALIMVDHSQGHAAYPPDALRVSEMNLNPGGSQCRLRDGWFMRDGIKIIQPMIFAHDHSTNPNQPKGIKAVLEEHGLWIPRLRLECKKPKCEVGATS-------CCARQLLGQQPDFREQKSLVQEVIEAAGHLCIFLPK 146
BLAST of mRNA_P-littoralis_Contig1280.11.1 vs. uniprot
Match: UPI0004624022 (uncharacterized protein n=1 Tax=Trametes versicolor (strain FP-101664) TaxID=717944 RepID=UPI0004624022) HSP 1 Score: 84.3 bits (207), Expect = 8.430e-17 Identity = 56/158 (35.44%), Postives = 80/158 (50.63%), Query Frame = 1
Query: 1 QQAILAAFELSREPGRQMLAVFDNSTGHAAFSPDALRAQNIAAGVGGEQAIPKDFEYDGRTIYTTFREGDVLIGVA---------KGMKEILEDMKLYRLLGEKKAPLLDGGGAHGSGSSRRCCCRWIISQVQAFKDQMNRVEELFEAAGHVCIFLAK 447
Q+ I+ AFE + PG Q L + DNS GH+A+S DAL + GG+QA +D +Y T + ++ A KGMK++LE+ L+R K P G +R CC + I+ F Q + V+E+ EAAGH+CIFL K
Sbjct: 70 QEKIIPAFEAAHGPGYQALIMVDNSQGHSAYSADALLTSRMNLRPGGKQARMRDGQY---TDASGVEHVQSMVFPADHPEFPDKPKGMKQVLEERGLWRKGMLMKCP----DGDKCDPDARDCCAKRILDLQPDFAGQQSLVQEVIEAAGHMCIFLPK 220 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1280.11.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1280.11.1 >prot_P-littoralis_Contig1280.11.1 ID=prot_P-littoralis_Contig1280.11.1|Name=mRNA_P-littoralis_Contig1280.11.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=150bp QQAILAAFELSREPGRQMLAVFDNSTGHAAFSPDALRAQNIAAGVGGEQAback to top mRNA from alignment at P-littoralis_Contig1280:26378..27494+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig1280.11.1 ID=mRNA_P-littoralis_Contig1280.11.1|Name=mRNA_P-littoralis_Contig1280.11.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1117bp|location=Sequence derived from alignment at P-littoralis_Contig1280:26378..27494+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig1280:26378..27494+ >mRNA_P-littoralis_Contig1280.11.1 ID=mRNA_P-littoralis_Contig1280.11.1|Name=mRNA_P-littoralis_Contig1280.11.1|organism=Pylaiella littoralis U1_48|type=CDS|length=450bp|location=Sequence derived from alignment at P-littoralis_Contig1280:26378..27494+ (Pylaiella littoralis U1_48)back to top |