prot_P-littoralis_Contig128.45.2 (polypeptide) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig128.45.2 vs. uniprot
Match: A0A6H5JVC8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVC8_9PHAE) HSP 1 Score: 156 bits (395), Expect = 2.270e-44 Identity = 89/170 (52.35%), Postives = 116/170 (68.24%), Query Frame = 0
Query: 20 VDCRGTFAPVCRISSQIVILCLAASRGLHVEHLDVKTAFLSAPVEEDIWGHDRPRQTRRY-----CTGAQLVLKLRKTLYGLRRSPRNLNCTFAAAIECLGFTPLLSVPCVYVYGSGDTYVVLSIYVDAILLLGVYPDVVKSVREQLLSKFKMTDLGRASLVVLGMEIEQ 184
+D GT+APV R SSQ+V++ +AA RG VE +DV TAFL + VEE+++ RQ + Y TG LV+KL+K+LYGL++SPRN FA I+ +GFT LLS PCVYVYG+G TY +L +YVD L G P VV+ +++QL KFKMTD G A L+ LGMEI Q
Sbjct: 70 IDYGGTYAPVSRFSSQLVLMAIAAERGYVVETMDVVTAFLQSNVEEEVY----VRQAKGYEITDEVTGLPLVMKLKKSLYGLKQSPRNFGNAFAKGIKEIGFTALLSDPCVYVYGAGPTYAILCVYVDDCTLAGRTPSVVQDLKKQLSDKFKMTDGGPAELL-LGMEISQ 234
BLAST of mRNA_P-littoralis_Contig128.45.2 vs. uniprot
Match: A0A6H5KY84_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY84_9PHAE) HSP 1 Score: 162 bits (410), Expect = 1.360e-42 Identity = 91/177 (51.41%), Postives = 120/177 (67.80%), Query Frame = 0
Query: 20 VDCRGTFAPVCRISSQIVILCLAASRGLHVEHLDVKTAFLSAPVEEDIWGHDRPRQTRRY-----CTGAQLVLKLRKTLYGLRRSPRNLNCTFAAAIECLGFTPLLSVPCVYVYGSGDTYVVLSIYVDAILLLGVYPDVVKSVREQLLSKFKMTDLGRASLVVLGMEIEQGLATVIM 191
+DC GT+APV R SSQ+V++ +AA RG VE +DV TAFL + VEE+++ RQ + Y TG LV+KL+K+LYGL++SPRN FA I+ +GFT LLS PCVYVYG+G TY +L +YVD L G P VV+ +++QL KFKMTD G A L+ LGMEI Q +I+
Sbjct: 966 IDCGGTYAPVSRFSSQLVLMAIAAERGYVVETMDVVTAFLQSNVEEEVY----VRQAKGYEITDEVTGLPLVMKLKKSLYGLKQSPRNFGNAFAKGIKEIGFTALLSDPCVYVYGAGPTYAILCVYVDDCTLAGKTPSVVQDLKKQLSDKFKMTDGGPAELL-LGMEISQSDGEIIV 1137
BLAST of mRNA_P-littoralis_Contig128.45.2 vs. uniprot
Match: A0A6H5KFG1_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFG1_9PHAE) HSP 1 Score: 125 bits (314), Expect = 6.710e-32 Identity = 75/151 (49.67%), Postives = 97/151 (64.24%), Query Frame = 0
Query: 39 LCLAASRGLHVEHLDVKTAFLSAPVEEDIWGHDRPRQTRRY-----CTGAQLVLKLRKTLYGLRRSPRNLNCTFAAAIECLGFTPLLSVPCVYVYGSGDTYVVLSIYVDAILLLGVYPDVVKSVREQLLSKFKMTDLGRASLVVLGMEIEQ 184
+ +AA RG VE +DV T FL + VEE+++ RQ + Y TG LV+KL+K+LYGL++SPRN FA + +GFT LLS PCVYVYG+G TY +L +YVD L G P VV+ ++QL KF MTD G A L+ LGMEI Q
Sbjct: 1 MAIAAERGYVVETMDVVTEFLQSNVEEEVY----VRQAKGYEITDEVTGLPLVMKLKKSLYGLKQSPRNFGNAFAKGNKEIGFTALLSDPCVYVYGAGPTYAILCVYVDNCTLAGRTPSVVQDWKKQLSDKFNMTDGGPAELL-LGMEIYQ 146
BLAST of mRNA_P-littoralis_Contig128.45.2 vs. uniprot
Match: A0A6H5KJH6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJH6_9PHAE) HSP 1 Score: 124 bits (312), Expect = 1.950e-29 Identity = 74/196 (37.76%), Postives = 108/196 (55.10%), Query Frame = 0
Query: 2 EHLKLAWLFKASDNG-------------MALVDCRGTFAPVCRISSQIVILCLAASRGLHVEHLDVKTAFLSAPVEEDIWGHDRPRQTRRYCTGAQLVLKLRKTLYGLRRSPRNLNCTFAAAIECLGFTPLLSVPCVYVYGSGDTYVVLSIYVDAILLLGVYPDVVKSVREQLLSKFKMTDLGRASLVVLGMEIEQ 184
+ +K W+FK +G + +DC T+APVCRI S ++ C+ L + +DV TAFL A ++E+++ P + G +V+KL K+LYGL +SP N T + +GF L S PCVY+Y + L++YVD +LL G D + V+ +L +FKMTDLG ASLV LGMEI +
Sbjct: 1196 KRIKSKWVFKRKADGTFKGRVVAQGWNQVPGLDCGSTYAPVCRIQSVRMVACITVEFNLIFDQMDVSTAFLYADIQEEVFVEQPPGFEVKDKDGGDMVMKLNKSLYGLAQSPGNWFNTIDPVLVEIGFVALKSDPCVYLYDHNGAKIYLTLYVDDLLLAGNDSDAISMVKGKLQKRFKMTDLGEASLV-LGMEIRR 1390
BLAST of mRNA_P-littoralis_Contig128.45.2 vs. uniprot
Match: A0A6H5J842_9PHAE (Gag-Pol-p199 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J842_9PHAE) HSP 1 Score: 124 bits (312), Expect = 1.960e-29 Identity = 74/196 (37.76%), Postives = 108/196 (55.10%), Query Frame = 0
Query: 2 EHLKLAWLFKASDNG-------------MALVDCRGTFAPVCRISSQIVILCLAASRGLHVEHLDVKTAFLSAPVEEDIWGHDRPRQTRRYCTGAQLVLKLRKTLYGLRRSPRNLNCTFAAAIECLGFTPLLSVPCVYVYGSGDTYVVLSIYVDAILLLGVYPDVVKSVREQLLSKFKMTDLGRASLVVLGMEIEQ 184
+ +K W+FK +G + +DC T+APVCRI S ++ C+ L + +DV TAFL A ++E+++ P + G +V+KL K+LYGL +SP N T + +GF L S PCVY+Y + L++YVD +LL G D + V+ +L +FKMTDLG ASLV LGMEI +
Sbjct: 1361 KRIKSKWVFKRKADGTFKGRVVAQGWNQVPGLDCGSTYAPVCRIQSVRMVACITVEFNLIFDQMDVSTAFLYADIQEEVFVEQPPGFEVKDKDGGDMVMKLNKSLYGLAQSPGNWFNTIDPVLVEIGFVALKSDPCVYLYDHNGAKIYLTLYVDDLLLAGNDSDAISMVKGKLQKRFKMTDLGEASLV-LGMEIRR 1555
BLAST of mRNA_P-littoralis_Contig128.45.2 vs. uniprot
Match: A0A6H5L4S3_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4S3_9PHAE) HSP 1 Score: 114 bits (286), Expect = 1.000e-28 Identity = 68/138 (49.28%), Postives = 90/138 (65.22%), Query Frame = 0
Query: 52 LDVKTAFLSAPVEEDIWGHDRPRQTRRY-----CTGAQLVLKLRKTLYGLRRSPRNLNCTFAAAIECLGFTPLLSVPCVYVYGSGDTYVVLSIYVDAILLLGVYPDVVKSVREQLLSKFKMTDLGRASLVVLGMEIEQ 184
+ V TAFL + VE +++ RQ + Y TG LV+KL+K+LYGL++SPRN A I+ +GFT LLS PCV VYG+G TY +L +YVD L G P VV+ +++QL +KFKMTD G A L+ LGMEI Q
Sbjct: 1 MGVVTAFLQSNVEAEVY----VRQAKGYEIMDEVTGLPLVMKLKKSLYGLKQSPRNFGNAVAKGIKDIGFTALLSDPCVCVYGAGPTYAILCVYVDNCTLAGTTPSVVQDMKKQLSNKFKMTDGGPAELL-LGMEIAQ 133
BLAST of mRNA_P-littoralis_Contig128.45.2 vs. uniprot
Match: A0A6H5KL37_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL37_9PHAE) HSP 1 Score: 121 bits (303), Expect = 2.860e-28 Identity = 74/211 (35.07%), Postives = 113/211 (53.55%), Query Frame = 0
Query: 2 EHLKLAWLFKASDNG-------------MALVDCRGTFAPVCRISSQIVILCLAASRGLHVEHLDVKTAFLSAPVEEDIWGHDRPRQTRRYCTGAQLVLKLRKTLYGLRRSPRNLNCTFAAAIECLGFTPLLSVPCVYVYGSGDTYVVLSIYVDAILLLGVYPDVVKSVREQLLSKFKMTDLGRASLVVLGMEIE----QGLATVIMRRFA 195
+ +K W+FK G + +DC T+APVCR S ++ C+A L ++ +DV TAFL A + E+++ P + G LV++L+K+LYGL +SP N T + +GF PL S CVY+Y D V L++YVD +LL G + ++++L +FKMTD+G LV LGMEI+ QG T+ ++
Sbjct: 504 KRIKSKWVFKRKAGGSFKGRLVAQGWNQVPGLDCGNTYAPVCRFQSIRMLACIAVQFNLELDQMDVSTAFLYADILENVFVEQPPGFEVKDKDGGDLVMQLQKSLYGLAQSPSNWFHTIDPFLVEIGFVPLKSDTCVYLYDHDDVQVYLTLYVDDLLLAGNNSRAISMIKKKLTQRFKMTDMGEVKLV-LGMEIKRDRNQGTLTISQEAYS 713
BLAST of mRNA_P-littoralis_Contig128.45.2 vs. uniprot
Match: A0A6H5JYB5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYB5_9PHAE) HSP 1 Score: 119 bits (298), Expect = 1.410e-27 Identity = 71/196 (36.22%), Postives = 106/196 (54.08%), Query Frame = 0
Query: 2 EHLKLAWLFKASDNG-------------MALVDCRGTFAPVCRISSQIVILCLAASRGLHVEHLDVKTAFLSAPVEEDIWGHDRPRQTRRYCTGAQLVLKLRKTLYGLRRSPRNLNCTFAAAIECLGFTPLLSVPCVYVYGSGDTYVVLSIYVDAILLLGVYPDVVKSVREQLLSKFKMTDLGRASLVVLGMEIEQ 184
+ +K W+FK +G + +DC T+APVCRI S ++ C+ L + +DV TAFL + E+++ P + G +V+KL ++LYGL +SP N T + +GF L S PCVY+Y + L++YVD +LL G D + V+ +L +FKMT+LG ASLV LGMEI +
Sbjct: 977 KRIKSKWVFKRKADGTFKGRVVAQGWNQVPGLDCGSTYAPVCRIQSVRMVACITVEFNLIFDQMDVSTAFLYTDIHEEVFVEQPPGFEVKDKDGGDMVMKLNRSLYGLAQSPGNWFNTIDPVLVEIGFVALKSDPCVYLYDHNGAKIYLTLYVDDLLLAGNDSDAISMVKGKLQKRFKMTNLGEASLV-LGMEIRR 1171
BLAST of mRNA_P-littoralis_Contig128.45.2 vs. uniprot
Match: A0A6H5KWT4_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWT4_9PHAE) HSP 1 Score: 116 bits (291), Expect = 8.040e-27 Identity = 69/196 (35.20%), Postives = 109/196 (55.61%), Query Frame = 0
Query: 2 EHLKLAWLFKASDNG-------------MALVDCRGTFAPVCRISSQIVILCLAASRGLHVEHLDVKTAFLSAPVEEDIWGHDRPRQTRRYCTGAQLVLKLRKTLYGLRRSPRNLNCTFAAAIECLGFTPLLSVPCVYVYGSGDTYVVLSIYVDAILLLGVYPDVVKSVREQLLSKFKMTDLGRASLVVLGMEIEQ 184
+ +K W+FK +G + +D TFAPVCR+ S ++ C A L ++ +DV TAFL A + E+++ P + G LV++L+K+LYGL +SP N T + +GF PL S C+Y+Y D V L++YVD +LL G + + +++++L +F MTD+G LV LGMEI++
Sbjct: 95 KRIKSKWVFKRKADGSFKGRLVVQGWNQVPGLDYGSTFAPVCRLQSIRMLACTAVQFNLELDQMDVSTAFLYADILENVFVEQPPGFEVKNKDGGDLVMQLQKSLYGLAQSPSNWFHTIDPLLVEIGFVPLKSDTCIYLYDHDDVQVYLTLYVDDLLLAGDNSNAISTIKKKLKQRFNMTDMGGVKLV-LGMEIKR 289
BLAST of mRNA_P-littoralis_Contig128.45.2 vs. uniprot
Match: A0A6H5K9R3_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9R3_9PHAE) HSP 1 Score: 117 bits (292), Expect = 8.530e-27 Identity = 64/164 (39.02%), Postives = 99/164 (60.37%), Query Frame = 0
Query: 20 VDCRGTFAPVCRISSQIVILCLAASRGLHVEHLDVKTAFLSAPVEEDIWGHDRPRQTRRY-CTGAQLVLKLRKTLYGLRRSPRNLNCTFAAAIECLGFTPLLSVPCVYVYGSGDTYVVLSIYVDAILLLGVYPDVVKSVREQLLSKFKMTDLGRASLVVLGMEI 182
+D +A VCRI S + +A RG V +DV AFL +++D+W P Q + TG +V KL ++LYGL +SP T + +GF P S PCVY++GSGDT V+L++YV+ IL+ G PD+V ++++L +F++TD+G L+ LGM++
Sbjct: 456 IDDGRRYARVCRIGSVRIFFAIACERGWPVWQMDVAVAFLQPTIDKDVWVKPAPGQDAKDPATGGIMVYKLERSLYGLAQSPVLWYDTIDEVLVVIGFRPTQSDPCVYIHGSGDTLVILTLYVNDILISGKDPDLVADLKKELQDRFEITDIGEVRLI-LGMKV 618 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig128.45.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_P-littoralis_Contig128.45.2 ID=prot_P-littoralis_Contig128.45.2|Name=mRNA_P-littoralis_Contig128.45.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=201bpback to top Annotated Terms
The following terms have been associated with this polypeptide:
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