prot_P-littoralis_Contig128.17.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig128.17.1
Unique Nameprot_P-littoralis_Contig128.17.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length729
Homology
BLAST of mRNA_P-littoralis_Contig128.17.1 vs. uniprot
Match: D7FVB5_ECTSI (Protein phosphatase type 2A regulator/ signal transducer n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVB5_ECTSI)

HSP 1 Score: 652 bits (1683), Expect = 1.140e-223
Identity = 400/758 (52.77%), Postives = 495/758 (65.30%), Query Frame = 0
Query:   22 MPPLPSKTSS----------EKSTPRQVSFSASESTPIGDRADISTRDSDVSFKSPHISAAQAVHEAMLDPSDWVLRNRQTGQEVEATAFAEELLARRPATQGSMMSPQFGTS--GGRGWARGYRKKSPIIQRPTLLPRGSCDVCFASAAVGNSPPTPPPSLKLSLLSVSS-LTPMRARGRS-LKGSTFSRARNDSLSLGGSNSGNTTSNAVLSV-SDSAFKLNEMSTAQVIPRLHPGGIRAMSFSPSGGFLATSGVDQRCCIFRVQHRPQ-MTEEEGSGEELA------------RQRNFLSMAGRLIEDQPMRILTGHTDSVVALAWAGDDSTLLTGSADGTVRCWHPLEGDECSEVYEHGGEVTSVAWDPAVGQVGWGAVRGGRFLTGCMDAKIRLFSLGSSEVKQSVLAERPVTAVAFCMGGQRIAAGCVSGTVLFYRTEGMVPELTVDCRRRGFRLSAAQRTR--TSPIRLSGISDSLNGNVNGGGRGSR--------------------RRSTMGPTTGARVLGLEEERVTGLCFRPQSTGLTDLRVSGDCSDLDEEGHASNSSPPSTGEDLGDSSLETVSTPGFEGETVTQQADAQLTPGGEKARLGSM-TDLLVSTNDSRLRVLVSEEGGGIAVGFKLKGHNTDGVLGRHISAQYSEDGHFIVSGSTDGHVHVFTRPTALGNATPRRAVAWSSVREGYERAQVCEKNVAVPVAFFAPARAVRSLGGASSRLILTGDAEGNCKILCERNVE 728
            MPPLP+K S            K  P +   + S   P  D +D +T +S +S+K  H     AV+EA+ DPS W+L+N++TGQEVEATAFA+ LLARRPA Q + +SP+ G+   G RGW R  R K+P  QRPTLLP  + DV +   A     P  PPSL+L   S+S   +P+R   RS + G +FSR R  S S G SNS +TTS+ +LSV +   FKL  MST Q++PRLHPGG+RAMSFSPSG FLAT G+D+RCC+FRVQ R Q +   EGS    A            RQ + + + GRL++DQP+R+LTGH DSVVALAWAG D+ LLTGS+DGTVRCWHPLEG+ECSEVYEHGG VTSVAW+P       G   GGRFLTGCMDA+IRLFSL S EV+QSVL+ER VTAVAFC GGQ  AAG ++G V FYR E M  ELTV+CRR GFR SAAQRTR  TSP+R   +    +G  NG G G R                      +T+G   GARV G  EERVTGLCFRP + G  +L  +GDCSD D E H  + +  STG  +G++S E   +P   GE V  QAD +   G     +  +  DLLVSTND+R R+LVS E G + VGFKLKGH+T+G LGRH +A+YS+DG+ IVSG+TDG VHV+  PT        ++V WSS REG+ERA+VC+K V VPVAFFAPA   ++LGG SSR+I+TGD EGNCKI CE+  +
Sbjct:    1 MPPLPAKKSPGTSDAAASNLAKQPPAESPRAVSSLKP--DTSDGATFESYLSYKPSHGEDTLAVYEAVSDPSKWLLKNKETGQEVEATAFADTLLARRPAPQWATVSPRLGSHSHGSRGWPRLQRHKAPAFQRPTLLPPSNGDVAYFPLAPAG--PLTPPSLQLGFSSLSGRASPLRFGARSPVSGQSFSRPRCGSNSHGRSNSDSTTSSVILSVDAPPTFKLRNMSTTQLLPRLHPGGVRAMSFSPSGAFLATCGMDRRCCVFRVQKRRQTLALGEGSPNAAAVAVGLPVDRGMSRQPSSVCVEGRLVDDQPLRVLTGHVDSVVALAWAGGDNALLTGSSDGTVRCWHPLEGNECSEVYEHGGGVTSVAWEPG------GEAHGGRFLTGCMDARIRLFSLDSPEVEQSVLSERAVTAVAFCPGGQSFAAGGIAGNVEFYRMENMSLELTVECRRHGFRHSAAQRTRLATSPVRRLSVGTG-DGRSNGAG-GDRVXXXXXXXXXXXXXXXXXXXXXNTLGSRAGARVPGTVEERVTGLCFRPPTKGPAEL--AGDCSDSDGEEHRLSGASRSTGGKMGENSQEVAPSPRAGGEVVAPQADEKDANGSGNLWVERLEADLLVSTNDNRSRILVSGERG-VTVGFKLKGHSTEGELGRHTAARYSDDGNLIVSGATDGSVHVWPTPTTPPGT---KSVTWSSGREGHERARVCDKRVGVPVAFFAPASVAKNLGGTSSRVIVTGDNEGNCKIFCEQRAD 740          
BLAST of mRNA_P-littoralis_Contig128.17.1 vs. uniprot
Match: A0A196S6S1_BLAHN (Uncharacterized protein n=1 Tax=Blastocystis sp. subtype 1 (strain ATCC 50177 / NandII) TaxID=478820 RepID=A0A196S6S1_BLAHN)

HSP 1 Score: 110 bits (274), Expect = 5.740e-22
Identity = 75/211 (35.55%), Postives = 109/211 (51.66%), Query Frame = 0
Query:  240 RLHPGGIRAMSFSPSGGFLATSGVDQRCCIFRVQHRPQMTEEEGSGEELARQRNFLSMAGRLIEDQPMRILTGHTDSVVALAWAGDDSTLLTGSADGTVRCWHPLEGDECSEVYEHGGEVTSVAWDPAVGQVGWGAVRGGRFLTGCMDAKIRLFSLGSSEVKQSVLAERPVTAVAFCMGGQRIAAGCVSGTVLFYRTEGMVPELTVDCRRR 450
            R H   I  M FS    +LAT G D    I++V+   ++T+EE             +M  R+ EDQP+R  TGHT  +V  AW+  +  LL+ S D TVR WHP + D C  +++H   VTSV + P              F++GCMD K+R++S+    V +   A   +T V FC GG+  AAG   G V+FY ++G+     ++CR R
Sbjct:   64 RHHQNAIWTMKFSCDRKYLATGGEDGVVNIWKVR---KVTKEEWKE----------NMDVRIFEDQPVRSYTGHTSHIVDFAWS-KNGFLLSASLDCTVRLWHP-DYDNCLCIFKHKDMVTSVDFYPE---------EEAYFISGCMDRKLRVWSIPQGCVLKWTQAPSVITTVTFCPGGRLCAAGLSDGQVIFYYSDGLRYFTQMECRNR 250          
BLAST of mRNA_P-littoralis_Contig128.17.1 vs. uniprot
Match: A0A0A0KXH1_CUCSA (Uncharacterized protein n=5 Tax=Benincaseae TaxID=1003877 RepID=A0A0A0KXH1_CUCSA)

HSP 1 Score: 74.3 bits (181), Expect = 6.080e-10
Identity = 65/237 (27.43%), Postives = 96/237 (40.51%), Query Frame = 0
Query:  242 HPGGIRAMSFSPSGGFLATSGVDQRCCIFRVQHRPQMT---EEEGS------------------------GEELARQRNFL-SMAGRLIED-------------QPMRILTGHTDSVVALAWAGDDSTLLTGSADGTVRCWHPLEGDECSEVYEHGGEVTSVAWDPAVGQVGWGAVRGGRFLTGCMDAKIRLFSLGSSEVKQSVLAERPVTAVAFCMGGQRIAAGCVSGTVLFYRTE 437
            H G I  M FS     LA++G D+   I+ VQ    M+    EEGS                         E+  + +    S  G +I D             +P+  L GH D V+ L+W+ D   LL+ S D TVR W  +E   C +++ H   VT V ++P              F++G +DAK+R++++    V         VTA ++   GQ    GC  GT   Y  E
Sbjct:  407 HEGSIWTMKFSCDARLLASAGEDRVIHIWEVQECEVMSMKPNEEGSMTPLHPSICPSPDRPAIGDASALSSEKRKKGKGISGSRKGNVIPDYVHVPESVFSLSEKPIYTLNGHLDDVLDLSWSSDSQLLLSSSTDKTVRLWD-METKSCLKMFAHNDYVTCVQFNPMDDDY---------FISGALDAKVRIWNIPDRYVVDWTDLHEMVTAASYTPDGQGAVIGCHKGTCRMYSIE 633          
BLAST of mRNA_P-littoralis_Contig128.17.1 vs. uniprot
Match: A0A6I9UBG7_SESIN (WD repeat-containing protein 44 n=1 Tax=Sesamum indicum TaxID=4182 RepID=A0A6I9UBG7_SESIN)

HSP 1 Score: 72.8 bits (177), Expect = 1.810e-9
Identity = 60/235 (25.53%), Postives = 100/235 (42.55%), Query Frame = 0
Query:  242 HPGGIRAMSFSPSGGFLATSGVDQRCCIFRVQH-----------------------------RPQMTEEEGSGEELARQRN-------FLSMAGRL--IEDQPMRILTGHTDSVVALAWAGDDSTLLTGSADGTVRCWHPLEGDECSEVYEHGGEVTSVAWDPAVGQVGWGAVRGGRFLTGCMDAKIRLFSLGSSEVKQSVLAERPVTAVAFCMGGQRIAAGCVSGTVLFYRTEG 438
            H G I  + FS  G FLA++G D+   ++ +Q                              RP + E      E+ R+         ++S+   +  + ++P+   TGHTD V+ L+W+     LL+ S D TVR W  +E   C + + H   VT + ++P         V    F++G +DAK+R++++   +V         VTA ++   GQ    G + GT   Y  EG
Sbjct:  414 HEGSIWTIRFSSDGRFLASAGEDRTIHVWEMQECDLIKQGDDPSSASGATPPHPMAGNISSDRPPLAEITPMPSEMKRKGKTNGGKPEYVSVPETVQALSEKPVCTFTGHTDEVLDLSWS-TSQLLLSSSMDKTVRMWD-METKSCLKTFAHNDYVTCIQFNP---------VDEDYFISGSLDAKVRIWNIPKRKVVDWTDVPEMVTAASYTPDGQGAIIGSLQGTCRLYSIEG 637          
BLAST of mRNA_P-littoralis_Contig128.17.1 vs. uniprot
Match: A0A395MHI3_9HYPO (Putative wd repeat-containing protein c3h5.08c n=3 Tax=Fusarium incarnatum-equiseti species complex TaxID=450425 RepID=A0A395MHI3_9HYPO)

HSP 1 Score: 71.2 bits (173), Expect = 2.920e-9
Identity = 47/121 (38.84%), Postives = 68/121 (56.20%), Query Frame = 0
Query:  251 FSPSGGFLATSGVDQRCCIFRVQHRPQMTEEEGSGEELARQRNFLSMAGR-----LIEDQPMRILTGHTDSVVALAWAGDDSTLLTGSADGTVRCWHPLEGDECSEVYEHGGEVTSVAWDP 366
            FS SG +LA +G D+   +F+V      TEEE   +E  R  +  S+A +     +   QP R   GH+  ++ L+W+ +D  LL+GSAD TVR WHP +   C  V++H   VTSVA+ P
Sbjct:   51 FSLSGQYLAVAGKDRSIKVFKVI----ATEEERLAQE--RYESQFSLASKSPLAPVFLSQPCREFKGHSADILTLSWSKNDF-LLSGSADKTVRLWHPSQ-PTCIRVFQHDRTVTSVAFHP 163          
BLAST of mRNA_P-littoralis_Contig128.17.1 vs. uniprot
Match: A0A8H3IXS2_9LECA (Uncharacterized protein n=1 Tax=Gomphillus americanus TaxID=1940652 RepID=A0A8H3IXS2_9LECA)

HSP 1 Score: 70.5 bits (171), Expect = 9.380e-9
Identity = 62/232 (26.72%), Postives = 101/232 (43.53%), Query Frame = 0
Query:  246 IRAMSFSPSGGFLATSGVDQRCCIFRVQHRPQMTEEEGSGEELARQRNF-LSMAGRLIEDQPMRILTGHTDSVVALAWAGDDSTLLTGSADGTVRCWHPLEGDECSEVYEHGGEVTSVAWDPAVGQVGWGAVRGGRFLTGCMDAKIRLFSLGSSEVKQSVLAERPVTA-VAFCMGGQRIAAGCVSGTVLFYRTEGMVPELTVDCR------RRGFRLSAAQRTRTSPIRLSG 469
            I A+ FS  G +LA+ G +    I RV       ++ G  EE A +    + ++  + + +P+    GHT +++ L+W+  +S LL+ S D TVR WHP  G EC   ++H   +TS+ + P          R  RF                                VAF   G+   AGC++G+V FY T+G+     +  R       RG ++++ Q     P +L+G
Sbjct:  254 IWALEFSKDGKYLASGGEEY---IVRVWEVLSKEDDHGDREEEANKTTSQMRLSAPVFKRKPIHEYEGHTGTILDLSWS-KNSFLLSSSMDKTVRLWHPTRG-ECLCAFKHTDHITSIQFHP----------RDDRFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAFTPDGKACIAGCLTGSVFFYETDGLRSLTQMQIRPSGRKNARGAKITSIQAMTYPPHQLNG 470          
BLAST of mRNA_P-littoralis_Contig128.17.1 vs. uniprot
Match: A0A6J1I6W9_CUCMA (uncharacterized protein LOC111471287 n=3 Tax=Cucurbita TaxID=3660 RepID=A0A6J1I6W9_CUCMA)

HSP 1 Score: 70.1 bits (170), Expect = 1.230e-8
Identity = 63/237 (26.58%), Postives = 95/237 (40.08%), Query Frame = 0
Query:  242 HPGGIRAMSFSPSGGFLATSGVDQRCCIFRVQHRPQMT---EEEGSGEEL------ARQRNFLSMAGRL--------------------------------IEDQPMRILTGHTDSVVALAWAGDDSTLLTGSADGTVRCWHPLEGDECSEVYEHGGEVTSVAWDPAVGQVGWGAVRGGRFLTGCMDAKIRLFSLGSSEVKQSVLAERPVTAVAFCMGGQRIAAGCVSGTVLFYRTE 437
            H G I  M FS     LA++G D+   I+ VQ    M+    EEGS   L      + +R  +  A  L                                + D+P+   TGH D V+ L+W+ +   LL+ S D TVR W  +E   C +++ H   VT V ++P         V    F++G +DAK+R++++    V         VTA  +   GQ    G   G+   Y  E
Sbjct:  394 HEGSIWVMKFSSDARLLASAGEDRVIHIWEVQECEVMSMKPNEEGSMTPLHPLYCPSPERPAIGEASALPSEKRKKGKGLSGSRKGTVIPDYVHVPETVFSLSDKPLSSFTGHQDDVLDLSWSSNSQLLLSSSMDKTVRLWD-METKNCLKMFAHNDYVTCVQFNP---------VDDNYFISGALDAKVRIWNIPDRYVVDWTDLHEMVTAACYTPDGQGAIIGSHKGSCRKYSIE 620          
BLAST of mRNA_P-littoralis_Contig128.17.1 vs. uniprot
Match: F6H267_VITVI (Uncharacterized protein n=3 Tax=Vitis TaxID=3603 RepID=F6H267_VITVI)

HSP 1 Score: 69.3 bits (168), Expect = 2.080e-8
Identity = 39/135 (28.89%), Postives = 63/135 (46.67%), Query Frame = 0
Query:  302 IEDQPMRILTGHTDSVVALAWAGDDSTLLTGSADGTVRCWHPLEGDECSEVYEHGGEVTSVAWDPAVGQVGWGAVRGGRFLTGCMDAKIRLFSLGSSEVKQSVLAERPVTAVAFCMGGQRIAAGCVSGTVLFYRT 436
            + ++P     GH D V+ L+W+     LL+ S D TVR WH L    C +++ H   VT + ++P   +          F++G +DAK+R++S+   +V         VTA  +   GQ    G   G+   Y T
Sbjct:  504 LSEKPFCSFQGHGDDVLDLSWSSKSQQLLSSSMDKTVRLWH-LSSKSCLKIFSHSDYVTCIQFNPVDDRY---------FISGSLDAKVRIWSIPDRQVVDWNDLHEMVTAACYTPDGQGALVGSYKGSCRLYNT 628          
BLAST of mRNA_P-littoralis_Contig128.17.1 vs. uniprot
Match: A0A078FV29_BRANA (BnaC09g30600D protein n=12 Tax=Brassiceae TaxID=981071 RepID=A0A078FV29_BRANA)

HSP 1 Score: 68.6 bits (166), Expect = 3.410e-8
Identity = 62/237 (26.16%), Postives = 97/237 (40.93%), Query Frame = 0
Query:  242 HPGGIRAMSFSPSGGFLATSGVDQRCCIFRVQHRPQMTEEEGSGEELARQR-------NFLSMA--------------GRL--------------------IEDQPMRILTGHTDSVVALAWAGDDSTLLTGSADGTVRCWHPLEGDECSEVYEHGGEVTSVAWDPAVGQVGWGAVRGGRFLTGCMDAKIRLFSLGSSEVKQSVLAERPVTAVAFCMGGQRIAAGCVSGTVLFYRTE 437
            H G I ++ FS  G +LAT+G D   C+ ++    ++ E E  GE L+  +       N   +A              GR                     + ++P+    GH D V+ L+W+     LL+ S D TVR W  L    C +V+ H   VT + ++P         V    F++G +DAK+R++S+   +V         VTA  +   GQ    G   GT   Y T+
Sbjct:  353 HKGSIWSIKFSLDGRYLATAGED---CVIQIW---KVVESERKGELLSMDKLQDDVSINLFLLANGSPEPASMSPMRRGRTSFSRKSVSLDNVLVPETVFGLSEKPVCTFVGHLDDVLDLSWS-KSLNLLSSSMDKTVRLWD-LSSKSCLKVFSHSDYVTCIQFNP---------VDDNYFISGSLDAKVRIWSIPDHQVVDWNDLHEMVTAACYTPDGQGALVGSYKGTCYLYNTQ 572          
BLAST of mRNA_P-littoralis_Contig128.17.1 vs. uniprot
Match: A0A2G5C849_AQUCA (Uncharacterized protein n=1 Tax=Aquilegia coerulea TaxID=218851 RepID=A0A2G5C849_AQUCA)

HSP 1 Score: 68.6 bits (166), Expect = 3.460e-8
Identity = 40/135 (29.63%), Postives = 65/135 (48.15%), Query Frame = 0
Query:  302 IEDQPMRILTGHTDSVVALAWAGDDSTLLTGSADGTVRCWHPLEGDECSEVYEHGGEVTSVAWDPAVGQVGWGAVRGGRFLTGCMDAKIRLFSLGSSEVKQSVLAERPVTAVAFCMGGQRIAAGCVSGTVLFYRT 436
            + ++P+R   GH D V+ L+W+     LL+ S D TVR WH +  + C +V+ H   VT + ++P   +          F++G +DAK+R++S+   +V         VTA  +   GQ    G   G    Y T
Sbjct:  431 LSEKPLRSFRGHLDDVLDLSWSKSQH-LLSSSMDKTVRLWH-MASNSCLKVFSHSDYVTCIQFNPVDDRY---------FISGSLDAKVRIWSIPDRQVVDWNDLHEMVTAACYTPDGQGALVGTYKGNCYLYNT 554          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig128.17.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FVB5_ECTSI1.140e-22352.77Protein phosphatase type 2A regulator/ signal tran... [more]
A0A196S6S1_BLAHN5.740e-2235.55Uncharacterized protein n=1 Tax=Blastocystis sp. s... [more]
A0A0A0KXH1_CUCSA6.080e-1027.43Uncharacterized protein n=5 Tax=Benincaseae TaxID=... [more]
A0A6I9UBG7_SESIN1.810e-925.53WD repeat-containing protein 44 n=1 Tax=Sesamum in... [more]
A0A395MHI3_9HYPO2.920e-938.84Putative wd repeat-containing protein c3h5.08c n=3... [more]
A0A8H3IXS2_9LECA9.380e-926.72Uncharacterized protein n=1 Tax=Gomphillus america... [more]
A0A6J1I6W9_CUCMA1.230e-826.58uncharacterized protein LOC111471287 n=3 Tax=Cucur... [more]
F6H267_VITVI2.080e-828.89Uncharacterized protein n=3 Tax=Vitis TaxID=3603 R... [more]
A0A078FV29_BRANA3.410e-826.16BnaC09g30600D protein n=12 Tax=Brassiceae TaxID=98... [more]
A0A2G5C849_AQUCA3.460e-829.63Uncharacterized protein n=1 Tax=Aquilegia coerulea... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 303..342
e-value: 9.2E-10
score: 48.4
coord: 346..394
e-value: 0.055
score: 22.6
coord: 618..653
e-value: 2.6
score: 14.4
coord: 397..435
e-value: 0.67
score: 18.1
coord: 231..271
e-value: 0.016
score: 24.4
IPR001680WD40 repeatPFAMPF00400WD40coord: 305..341
e-value: 3.9E-7
score: 30.6
coord: 615..652
e-value: 0.0061
score: 17.4
coord: 242..270
e-value: 0.05
score: 14.5
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 310..341
score: 14.485216
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 226..657
e-value: 1.3E-39
score: 138.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 523..570
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 476..496
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..59
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..17
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 535..570
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 476..492
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 24..51
NoneNo IPR availablePANTHERPTHR14221:SF0WD REPEAT-CONTAINING PROTEIN 44coord: 161..700
NoneNo IPR availablePROSITEPS50294WD_REPEATS_REGIONcoord: 310..341
score: 11.971952
IPR040324WD repeat-containing protein WDR44/Dgr2PANTHERPTHR14221WD REPEAT DOMAIN 44coord: 161..700
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 221..656

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig128contigP-littoralis_Contig128:59483..70076 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig128.17.1mRNA_P-littoralis_Contig128.17.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig128 58557..70195 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig128.17.1 ID=prot_P-littoralis_Contig128.17.1|Name=mRNA_P-littoralis_Contig128.17.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=729bp
MLDEMGAEADDARENRKGPSCMPPLPSKTSSEKSTPRQVSFSASESTPIG
DRADISTRDSDVSFKSPHISAAQAVHEAMLDPSDWVLRNRQTGQEVEATA
FAEELLARRPATQGSMMSPQFGTSGGRGWARGYRKKSPIIQRPTLLPRGS
CDVCFASAAVGNSPPTPPPSLKLSLLSVSSLTPMRARGRSLKGSTFSRAR
NDSLSLGGSNSGNTTSNAVLSVSDSAFKLNEMSTAQVIPRLHPGGIRAMS
FSPSGGFLATSGVDQRCCIFRVQHRPQMTEEEGSGEELARQRNFLSMAGR
LIEDQPMRILTGHTDSVVALAWAGDDSTLLTGSADGTVRCWHPLEGDECS
EVYEHGGEVTSVAWDPAVGQVGWGAVRGGRFLTGCMDAKIRLFSLGSSEV
KQSVLAERPVTAVAFCMGGQRIAAGCVSGTVLFYRTEGMVPELTVDCRRR
GFRLSAAQRTRTSPIRLSGISDSLNGNVNGGGRGSRRRSTMGPTTGARVL
GLEEERVTGLCFRPQSTGLTDLRVSGDCSDLDEEGHASNSSPPSTGEDLG
DSSLETVSTPGFEGETVTQQADAQLTPGGEKARLGSMTDLLVSTNDSRLR
VLVSEEGGGIAVGFKLKGHNTDGVLGRHISAQYSEDGHFIVSGSTDGHVH
VFTRPTALGNATPRRAVAWSSVREGYERAQVCEKNVAVPVAFFAPARAVR
SLGGASSRLILTGDAEGNCKILCERNVE*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR040324WDR44/Dgr2
IPR036322WD40_repeat_dom_sf