mRNA_P-littoralis_Contig1279.15.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig1279.15.1 vs. uniprot
Match: D7FZI2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZI2_ECTSI) HSP 1 Score: 228 bits (582), Expect = 2.490e-65 Identity = 122/239 (51.05%), Postives = 155/239 (64.85%), Query Frame = 1
Query: 1 KDDKEKPFSDFKVGFRHPHHLGVIFNMSDPMHILKKIVNALWHSDIPDKQRDLGVWASERDGESKKFFRFSLKTGERVFNEIEYEGKQLSMNEKSAMVSTFRHHSQAIWRRDNHSCMNVSHSTKVVGGTVIAAITE---KMEEHGW--DGALAGYKGLAIEMNDFVDIFNGNYARRKVDRLSGTRKGDGYIKSATSAHLERLIDILLHFEKWQNSLQEKNKELEGGEHAWKKHFITRES 702
K KE F+ FKVGF HP HL +FNMSDPMHILKKIVNALWHSDIP KQR LG+W D + KF +FSLKT +RV+N++EY+ ++ E++A ++ F + R N +CMNV S KVV GT++ AI E E G D AL Y+GLA+ +NDFVDIFNG+Y R K +R + K GY+ SA LERL++IL +F+ W + LQE GG+ WKKHFITR S
Sbjct: 674 KGPKEGSFAGFKVGFLHPVHLHEVFNMSDPMHILKKIVNALWHSDIPAKQRQLGMWCVT-DQDELKFSQFSLKTAQRVYNDVEYDNDSMTPEERAATLTIFPGMPVGAFNRTNFTCMNVKLSAKVVSGTIVRAIREVRANQETRGESPDLALGCYEGLAVHLNDFVDIFNGDYGRTKFERRAKINKMKGYVTSAEDPILERLMEILRYFDDWNDMLQEFPPPTGGGDVGWKKHFITRHS 911
BLAST of mRNA_P-littoralis_Contig1279.15.1 vs. uniprot
Match: A0A6H5JR14_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR14_9PHAE) HSP 1 Score: 206 bits (524), Expect = 4.470e-58 Identity = 116/265 (43.77%), Postives = 155/265 (58.49%), Query Frame = 1
Query: 31 FKVGFRHPHHLGVIFNMSDPMHILKKIVNALWHSDIPDKQRDLGVWASERDGESKKFFRFSLKTGERVFNEIEYEGKQLSMNEKSAMVSTFRHHSQAIWRRDNHSCMNVSHSTKVVGGTVIAAITEKMEEH------GWDGALAGYKGLAIEMNDFVDIFNG-----------------------NYARRKVDRLSGTRKGDGYIKSATSAHLERLIDILLHFEKWQNSLQEKNKELEGGEHAWKKHFITRESWFDLRLCILGFV 738
F V F HP HLG IFNMSDP HILKKI N WHSD K+R+L +W + +G + RFSL T ERV+N++E +G LS EK A ++TFR + + R++ +CMNVS+S KV+ GT++ I EK++ D L Y LA +M+ F+DIFNG N+ R + R +G K GYI SA + LE LI+++ F+KW++SLQEK G+ WKKHFIT SW D+R+CILGFV
Sbjct: 368 FPVAFPHPVHLGPIFNMSDPPHILKKIANTCWHSDQDSKKRELAMWCGDEEGNTD-LVRFSLATAERVYNQVENDGNTLSQEEKVASITTFRKVVPSCFNRNSWNCMNVSYSAKVLSGTIVCMI-EKVQRDLLTMGKPLDLELDCYAALAAKMDAFIDIFNGKLYIIFVLAYCLVFLKQQMWWSGNFGRSEYARRNGLDKEAGYISSADDSKLEELINMVRFFDKWRSSLQEKTTM---GDETWKKHFITEFSWTDIRVCILGFV 627
BLAST of mRNA_P-littoralis_Contig1279.15.1 vs. uniprot
Match: A0A6H5KVF4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVF4_9PHAE) HSP 1 Score: 171 bits (433), Expect = 4.650e-45 Identity = 93/180 (51.67%), Postives = 116/180 (64.44%), Query Frame = 1
Query: 1 KDDKEKPFSDFKVGFRHPHHLGVIFNMSDPMHILKKIVNALWHSDIPDKQRDLGVWASERDGESKKFFRFSLKTGERVFNEIEYEGKQLSMNEKSAMVSTFRHHSQAIWRRDNHSCMNVSHSTKVVGGTVIAAITE---KMEEHGW--DGALAGYKGLAIEMNDFVDIFNGNYARRKVDR 525
K KE F+ FKVGF HP HL +FNMSDPMHILKKIVNALWHSDIP KQR LG+W D + KF +FSLKT +RV+N++EY+ ++ E+ A ++ F + R N +CMNV S KVV GT++ AI E E G D AL Y+GLA+ +NDFVDIFNG R + R
Sbjct: 765 KGPKEGSFAGFKVGFLHPVHLHEVFNMSDPMHILKKIVNALWHSDIPAKQRQLGMWCVT-DQDELKFSQFSLKTAQRVYNDVEYDNDSMTPEERPATLTIFPGMPVGAFNRTNFTCMNVKLSAKVVSGTIVRAIREVRANQETRGESPDLALGCYEGLAVHLNDFVDIFNGEETTRGLAR 943
BLAST of mRNA_P-littoralis_Contig1279.15.1 vs. uniprot
Match: A0A6H5K7Z3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7Z3_9PHAE) HSP 1 Score: 164 bits (415), Expect = 4.080e-43 Identity = 103/245 (42.04%), Postives = 133/245 (54.29%), Query Frame = 1
Query: 13 EKPFSDFKVGFRHPHHLGVIFNMSDPMHILKKIVNALWHSDIPDKQRDLGVWASERDGESKKFFRFSLKTGERVFNEIEYEGKQLSMNEKSAMVSTFRHHSQAIWRRDNHSCMNVSHSTKVVGGTVI---AAITEKMEEHGWDGALAGYKGLAIEMNDFVDIFNGNYARRKVDRLSGTRKGDGYIKSATSAHLERLIDILLHFEKWQNSLQEKNKELEGGEHAWKKHFITRESWFDLRLCILGFV 738
E+ F+DF + F HPHH +FNMS P H+L +VNALW+S +P KQR L RD E ++ FSLKT E V+ E G LS E ++ + F + R++H+CM+V S K V T + EK+ +G +A Y LA MNDF+DI NG Y +V+R G K GYI A S L RL++IL F+ WQ SL E G W HFIT SW D+R ILGFV
Sbjct: 313 EERFADFPMAFNHPHHGEPVFNMSGPPHLLX-VVNALWYSSLPSKQRHLKNLFWNRDTEEFEWVSFSLKTLETVWVNEERGGGSLSAAEVASNLRRFLKFEPEMLDRNSHNCMSVRLSAKCVSRTAVYVCGCAQEKLASP--NGEIACYAELAEVMNDFLDIMNGVYGLNEVERKQGGNKRKGYITGADSPLLGRLLEILEFFDSWQVSL-----EAHFGPKEWANHFITDYSWTDMRTTILGFV 549
BLAST of mRNA_P-littoralis_Contig1279.15.1 vs. uniprot
Match: A0A6H5KFP1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFP1_9PHAE) HSP 1 Score: 164 bits (414), Expect = 1.570e-42 Identity = 101/248 (40.73%), Postives = 142/248 (57.26%), Query Frame = 1
Query: 13 EKPFSDFKVGFRHPHHLGVIFNMSDPMHILKKIVNALWHSDIPDKQRDL-GVWASERDGESKKFFRFSLKTGERVFNEIEYEGKQLSMNEKSAMVSTFRHHSQAIWRRDNHSCMNVSHSTKVVGGT---VIAAITEKME--EHGWDGALAGYKGLAIEMNDFVDIFNGNYARRKVDRLSGTRKGDGYIKSATSAHLERLIDILLHFEKWQNSLQEKNKELEGGEHAWKKHFITRESWFDLRLCILGFV 738
E+ D+ V F+HPHH G +FNMSDP+H+LKK+VNALW+S + K+R L +W + ++ + FSLKT E+ + E E + E++A + F A RD+H+CM+V S K V T VIA+ K+ + G LA Y +A MNDF+DI NG + + DR RK +GYI A L RL+++L F+ WQ++L + GG+ W HFIT SW D+R CILGFV
Sbjct: 528 EQRHKDYPVAFKHPHHDGPVFNMSDPVHLLKKVVNALWYSGLDSKERHLQNLWWNPLT-DAPELASFSLKTLEKAWREEEGHRANRTAAERAATLRRFLKMDAACLDRDSHTCMSVKLSAKCVSKTAMHVIASAQGKLLALDKPPSGELACYADVAEVMNDFLDIMNGVFNVLEQDRAHPQRKKEGYITGADCPPLTRLLEVLQFFDSWQSNL----RHTFGGK--WAPHFITDVSWKDMRSCILGFV 768
BLAST of mRNA_P-littoralis_Contig1279.15.1 vs. uniprot
Match: A0A6H5L5M0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5M0_9PHAE) HSP 1 Score: 155 bits (391), Expect = 1.380e-39 Identity = 86/170 (50.59%), Postives = 110/170 (64.71%), Query Frame = 1
Query: 1 KDDKEKPFSDFKVGFRHPHHLGVIFNMSDPMHILKKIVNALWHSDIPDKQRDLGVWASERDGESKKFFRFSLKTGERVFNEIEYEGKQLSMNEKSAMVSTFRHHSQAIWRRDNHSCMNVSHSTKVVGGTVIAAITE---KMEEHGW--DGALAGYKGLAIEMNDFVDIFN 495
K +E F+ FKVG HP HL +FNMSDPMHILKKIVNALWHSDIP KQR LG+W D + KF +FSLKT +RV+N++EY+ ++ E++A ++ F + + R N +CMNV S KVV GT++ AI E E G D AL Y+G +NDFVDIFN
Sbjct: 572 KGPQEGSFTSFKVGILHPVHLHEVFNMSDPMHILKKIVNALWHSDIPAKQRQLGMWCVT-DQDELKFSQFSLKTAQRVYNDVEYDNNSITPEERAATLTIFPGMPVSAFNRTNFTCMNVKLSAKVVSGTIVRAIREVRANRETRGEPPDLALGCYEG---HLNDFVDIFN 737
BLAST of mRNA_P-littoralis_Contig1279.15.1 vs. uniprot
Match: A0A6H5K5I6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5I6_9PHAE) HSP 1 Score: 132 bits (333), Expect = 5.580e-34 Identity = 68/124 (54.84%), Postives = 89/124 (71.77%), Query Frame = 1
Query: 370 KVVGGTVIAAITEKMEEHGWDGALAGYKGLAIEMNDFVDIFNGNYARRKVDRLSGTRKGDGYIKSATSAHLERLIDILLHFEKWQNSLQEKN-KELEGGEHAWKKHFITRESWFDLRLCILGFV 738
+VV G +I AI + ME +G +GA Y+ LA +MNDFVDIFNGNY R KVDR G++K G I+S SA ++RL++IL F+ WQ++L+ K+ EG + WKKHFIT +SWFDLRL ILGFV
Sbjct: 23 QVVSGMIIDAIADYMEANGRNGAAECYQTLARQMNDFVDIFNGNYGRSKVDRKDGSKKMVGCIRSFESAPMDRLLEILEFFDDWQSTLERKHIPSGEGDKLGWKKHFITHQSWFDLRLSILGFV 146
BLAST of mRNA_P-littoralis_Contig1279.15.1 vs. uniprot
Match: A0A6H5KYD6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYD6_9PHAE) HSP 1 Score: 107 bits (268), Expect = 4.470e-26 Identity = 58/117 (49.57%), Postives = 81/117 (69.23%), Query Frame = 1
Query: 28 DFKVGFRHPHHLGVIFNMSDPMHILKKIVNALWHSDIPDKQRDL-GVWASERDGESKKFFRFSLKTGERVFNEIEYEGKQLSMNEKSAMVSTFRHHSQAIWRRDNHSCMNVSHSTKV 375
DFKV FRHP H +FNMS+P+H+LKK+VNALWHS + DKQRDL G+W + E +++ FSLKT E V+N+ E G S E++A +S FR + ++ R++H+CM+V S KV
Sbjct: 5 DFKVAFRHPQHGRPVFNMSEPVHLLKKVVNALWHSGLADKQRDLKGLWWDPKT-EEEEWVSFSLKTLEEVWNQEEAGGGIRSGAEQAAHLSRFRKVNPEMFYRNSHNCMSVKLSAKV 120
BLAST of mRNA_P-littoralis_Contig1279.15.1 vs. uniprot
Match: D8LK65_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK65_ECTSI) HSP 1 Score: 112 bits (279), Expect = 4.930e-26 Identity = 60/121 (49.59%), Postives = 81/121 (66.94%), Query Frame = 1
Query: 13 EKPFSDFKVGFRHPHHLGVIFNMSDPMHILKKIVNALWHSDIPDKQRDLG-VWASERDGESKKFFRFSLKTGERVFNEIEYEGKQLSMNEKSAMVSTFRHHSQAIWRRDNHSCMNVSHSTK 372
EK DFKV F+HP H G +FNMSDP+H+LKK+VNALWHSDIP KQRDL +W +E E ++ FSLKT E+V+ E E G S+ E++A + F ++ R++H+CM+V S K
Sbjct: 142 EKRMGDFKVAFKHPSHGGPVFNMSDPVHLLKKVVNALWHSDIPSKQRDLKKLWYNEA-AEDYEWVSFSLKTLEKVWKEEEAGGGVRSVAEQAAHLIRFLKFDPEMFTRNSHNCMSVGLSAK 261
BLAST of mRNA_P-littoralis_Contig1279.15.1 vs. uniprot
Match: A0A6H5JRH8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRH8_9PHAE) HSP 1 Score: 65.5 bits (158), Expect = 1.530e-8 Identity = 29/54 (53.70%), Postives = 37/54 (68.52%), Query Frame = 1
Query: 7 DKEKPFSDFKVGFRHPHHLGVIFNMSDPMHILKKIVNALWHSDIPDKQRDLGVW 168
D E+ FS+F V RH HLG +FN+SDP H++KKI N LWHSD+ RD G +
Sbjct: 335 DDEESFSNFPVALRHSVHLGPMFNVSDPPHLVKKIANTLWHSDLTGAIRDDGTY 388 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1279.15.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1279.15.1 >prot_P-littoralis_Contig1279.15.1 ID=prot_P-littoralis_Contig1279.15.1|Name=mRNA_P-littoralis_Contig1279.15.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=246bp KDDKEKPFSDFKVGFRHPHHLGVIFNMSDPMHILKKIVNALWHSDIPDKQback to top mRNA from alignment at P-littoralis_Contig1279:41237..42375- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig1279.15.1 ID=mRNA_P-littoralis_Contig1279.15.1|Name=mRNA_P-littoralis_Contig1279.15.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1139bp|location=Sequence derived from alignment at P-littoralis_Contig1279:41237..42375- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig1279:41237..42375- >mRNA_P-littoralis_Contig1279.15.1 ID=mRNA_P-littoralis_Contig1279.15.1|Name=mRNA_P-littoralis_Contig1279.15.1|organism=Pylaiella littoralis U1_48|type=CDS|length=738bp|location=Sequence derived from alignment at P-littoralis_Contig1279:41237..42375- (Pylaiella littoralis U1_48)back to top |