prot_P-littoralis_Contig1274.4.12 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig1274.4.12
Unique Nameprot_P-littoralis_Contig1274.4.12
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length277
Homology
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BLAST of mRNA_P-littoralis_Contig1274.4.12 vs. uniprot
Match: D7FLL8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLL8_ECTSI)

HSP 1 Score: 346 bits (888), Expect = 5.390e-112
Identity = 196/295 (66.44%), Postives = 208/295 (70.51%), Query Frame = 0 
Query:    1 MRTLALRSLNPSRATLLVTEYLGQEEGAREGIRRQEGG------------------LGGAGESNDGEEETEEKENGEGEVNREEEAMPVEADWMGRTISRGFPPPA-SVLSPFAAARRERILLLPGWVRAFKPWGDFLEINVGVPVRALVREADDLLWLTSLYHDERAMVGVQVSYKPLGARMETKVNLALREDASARDRLQAMFQMRRASTPCGCANVIHRLLVRDPDGIPQGGDGVDRTLFLRKVTEEALRVTRKEFPVFRKALVREGWDLSRVTLGGGPWVGRWGTLAAKED 276
            MRTLALRSLNP+RA+LLVTEYLGQ  G+ EG     G                    GG                        EE      DWMGR   +G PP + +VLSPFAAARRERIL+LPGW RA KPWGDFL+I+VGVPVRALV EADDLLWLTSLYHDER+MVGVQVSYKPLGARMET VNLALREDAS  DRL AMFQ          ANVI  L+VRDPDGIP G DGVDRTLFLRKVTEEALRVTRKEFP FRKALVREGWDLSRVTLGGGPWVGRWG+LA KED
Sbjct:  414 MRTLALRSLNPTRASLLVTEYLGQALGSTEGRSGTRGSEQXXXXXXXXXXXXXXXXXGG------------------------EERKGPALDWMGRIRDQGSPPESVAVLSPFAAARRERILVLPGWFRALKPWGDFLQIHVGVPVRALVGEADDLLWLTSLYHDERSMVGVQVSYKPLGARMETTVNLALREDASPEDRLHAMFQ----------ANVIQHLVVRDPDGIPHGEDGVDRTLFLRKVTEEALRVTRKEFPAFRKALVREGWDLSRVTLGGGPWVGRWGSLA-KED 673
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1274.4.12 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FLL8_ECTSI5.390e-11266.44Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 274..276
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 27..68
NoneNo IPR availablePANTHERPTHR12770:SF22RUS1 FAMILY PROTEIN C16ORF58coord: 1..270
IPR006968Root UVB sensitive familyPANTHERPTHR12770RUS1 FAMILY PROTEIN C16ORF58coord: 1..270

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1274contigP-littoralis_Contig1274:24068..32417 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1274.4.12mRNA_P-littoralis_Contig1274.4.12Pylaiella littoralis U1_48mRNAP-littoralis_Contig1274 19851..32852 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig1274.4.12 ID=prot_P-littoralis_Contig1274.4.12|Name=mRNA_P-littoralis_Contig1274.4.12|organism=Pylaiella littoralis U1_48|type=polypeptide|length=277bp
MRTLALRSLNPSRATLLVTEYLGQEEGAREGIRRQEGGLGGAGESNDGEE
ETEEKENGEGEVNREEEAMPVEADWMGRTISRGFPPPASVLSPFAAARRE
RILLLPGWVRAFKPWGDFLEINVGVPVRALVREADDLLWLTSLYHDERAM
VGVQVSYKPLGARMETKVNLALREDASARDRLQAMFQMRRASTPCGCANV
IHRLLVRDPDGIPQGGDGVDRTLFLRKVTEEALRVTRKEFPVFRKALVRE
GWDLSRVTLGGGPWVGRWGTLAAKED*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006968RUS_fam