mRNA_P-littoralis_Contig1274.3.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig1274.3.1
Unique NamemRNA_P-littoralis_Contig1274.3.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig1274.3.1 vs. uniprot
Match: D7FLL7_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLL7_ECTSI)

HSP 1 Score: 306 bits (784), Expect = 7.020e-92
Identity = 229/495 (46.26%), Postives = 266/495 (53.74%), Query Frame = 1
Query:    1 EGLASQLFKLVAYGATPEQWEEWLRVPLEHAAFRGNLDLVNVLLGAGANGSAGWRGCRGRTLLDAAAVGGNGEVVSALIRAGAEPDVN*ASVSSGRSPLYAATYCGYEAAARRLILAGADVNFRDPVDKHPVLCNAVRGGHTQLVNDLLISGADPSSPDEYRITPLDEAAVRGEVGSLSALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----AARHHRCKAMLALLQNKAAVSSRIDSSGDTPLHRACCRQRRGLETAVDLLLRWGADETALNDRGRTPEQVMGSARARSSRCSSNEVERARLLLVHTPADRSWRRRSLLVMLRSRAKNMKAAWDRRDTGGVSGDKSYRTTAARQEGQDCKVRRSDATGDGEHDRDGAGVGGVVALLVGLEPEAVFRSVIGFL 1473
            +GL S+LFKLV+YGA+ EQW EWLRV LEHAA RGNL LV  LL AGA+  +GWRGCR RTLLDAA                A  DVN  +VSS RS LY AT CG+EAAA+RLILAG+DVNFRDPV K  VL  A++G HTQ V+DLLI GA P+  D+  + PL  AA+  E G +SAL                                                   XXXXXXXXXXXXXXXXXXXXXXX                                                 AA HHR   + ALLQN A+V +R D++GDTPLHRAC  QR GL  ++DLLLRWGADETA N RGRTP  V+G+ R  +  CS +EV+RARLLLV  P DR WRRR  LV+LRSR          R   G S D       AR+ G+  ++   D  G+           GVV LL  LEPEAVFRSV+GFL
Sbjct:   11 DGLGSELFKLVSYGASREQWAEWLRVALEHAASRGNLSLVERLLRAGADAGSGWRGCRCRTLLDAAXXXXXXXXXXXXXXXXAGADVNKVTVSSRRSALYTATCCGHEAAAKRLILAGSDVNFRDPVAKCSVLSQAIQGSHTQFVDDLLIGGARPNIRDDCGMAPLQAAALFAEEGVVSALLLAKADVNVGLGKTMYETPLMLAVRRGHLAIVETLLEAGADCSLRQLEDYSXXXXXXXXXXXXXXXXXXXXXXXVDAQDRAGCTALHTAILFSDRAGPAVHMLVKARADTELKSVGGWTPLHAAAEHHRVNCVAALLQNNASVRNRFDATGDTPLHRACVEQREGLAASIDLLLRWGADETARNKRGRTPLDVLGATRTDNPHCSPDEVDRARLLLVRAPTDRRWRRRGWLVVLRSRT----IVVAHRCAKGAS-DSGLSLCQARRNGKGARI---DVAGNSS---------GVVELLTELEPEAVFRSVLGFL 488          
BLAST of mRNA_P-littoralis_Contig1274.3.1 vs. uniprot
Match: A0A6H5K1F4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1F4_9PHAE)

HSP 1 Score: 247 bits (631), Expect = 3.870e-69
Identity = 194/541 (35.86%), Postives = 247/541 (45.66%), Query Frame = 1
Query:    1 EGLASQLFKLVAYGATPEQWEEWLRVPLEHAAFRGNLDLVNVLLGAGANGSAGWRGCRGRTLLDAAAVGGNGEVVSALIRAGAEPDVN*ASVSSGRSPLYAATYCGYEAAARRLILAGADVNFRDPVDKHPVLCNAVRGGHTQLVNDLLISGADPSSPDEYRITPLDEAAVRGE---VGSL--SALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAARHHRCKAMLALLQNKAAVSSRIDSSGDTPLHRACCRQRRGLETAVDLLLRWGADETALNDRGRTPEQVMGSARAR-----------SSRCS----------SNEVERARLLLVHTPADRSWRRRSLLVMLRSRAKNMKAAWDRRDTGGVSGDKSYRTTAA---------RQEGQDCKVRRSDATG--------DGEHDRDG-------AGVGGVVALLVGLEPEAVFRSVIGFL 1473
            EG   ++FKL+ +GATPEQW EWLR PLEHAA RGNL LV  LL AGANG AGWRGCRGRT+LDAAA+GGN +VV+ L+ +G   DVN  S+SS RS L+ A+ CG+EAAA++LI+AGADVN  DP D    L  AV G H  LV+ LLI GA P+S      TPL  AA  G    V +L  +A+                                                                                                                           + C+A++ALL+    V+   +  G + LH  C    RG++  VDLLLRWGA ETA+N  G TP  ++    A            ++RC           + E++RAR+LL   PADR+WRRR  LVMLR+RA+  + A         SG  S RT AA           +G + KV ++DA          DGE  RDG       AG GG+V  LVGLE E VFR+++ FL
Sbjct:   11 EGAELEIFKLLYFGATPEQWAEWLRAPLEHAAARGNLGLVERLLNAGANGGAGWRGCRGRTMLDAAALGGNPDVVATLLASGCASDVNVVSLSSRRSALHVASVCGHEAAAKKLIIAGADVNRVDPGDACVSLHVAVEGRHGDLVDLLLIGGACPNSRTMSGRTPLHLAAASGNNRVVSTLLGNAMTDVDALDSRGVSPLMVASEGGHCSTVEALLRAGADMNLRHAGGAHLGMTAMDVAVSKGHVGVIEAIVENGGNVRATDTYGLTALHHARGAQAVDVLLDAGADVNAKACPALHGFTPLSVCVMDNSCEAVVALLKRGGNVND-TNCGGLSALHLTCGSLSRGMDRMVDLLLRWGASETAVNKNGLTPSDILKVTTAEYHARDAGGDGSATRCVGGSATRHDSLTKEIQRARVLLARAPADRTWRRRCWLVMLRARAERGRGA-------PSSGSGSDRTEAATGRNLPRHEEADGDNSKVGKTDAGAVGEGSGPTDGERGRDGRATRGAAAGEGGLVPALVGLESEEVFRTIVCFL 543          
BLAST of mRNA_P-littoralis_Contig1274.3.1 vs. uniprot
Match: D8LRZ8_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRZ8_ECTSI)

HSP 1 Score: 232 bits (591), Expect = 1.950e-64
Identity = 264/501 (52.69%), Postives = 315/501 (62.87%), Query Frame = 1
Query:    1 EGLASQLFKLVAYGATPEQWEEWLRVPLEHAAFRGNLDLVNVLLGAGANGSAGWRGCRGRTLLDAAAVGGNGEVVSALIRAGAEPDVN*ASVSSGRSPLYAATYCGYEAAARRLILAGADVNFRDPVDKHPVLCNAVRGGHTQLVNDLLISGADPSSPDEYRITPLDEAAVRGEVGSLSALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAARHHRCKAMLALLQNKAAVSSRIDSSGDTPLHRACCRQRRGLETAVDLLLRWGADETALNDRGRTP-EQVMGSARARSSRCSSNEVERARLLLVHTPADRSWRRRSLLVMLRSRAKNMKAAWDRR---DTGG--VSGDKSYRTTAARQEGQDCKVR--RSDATGDGEHDRDG--AGVGGVVALLVGLEPEAVFRSVIGFL 1473
            +G+ S+++KLV++ ATP+QW+EWLRVPLEHAA RGNL+LVN LL AGA+GSAGW+GCRGRTL+DAAA+GG+  VVSAL+RAGA+PDVN  SVSS RS LY AT CG++ AARRLI AGADVNF DP     +L     GG T     +   G+                 +R +V   SAL      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                                      + G TPLHRAC RQ  G+E  VDLLL+WGADETA+++ G TP + ++ +     + CS+ E+ R RLLL   PA+R+WRRR  LVMLRS AK  +A  D+    D G   V   K  +   AR+E  +      RS   G GE   +G  +G+  +VA +VGL PE VFRS++ FL
Sbjct:   11 QGMGSEIWKLVSHSATPQQWKEWLRVPLEHAAARGNLNLVNSLLEAGADGSAGWKGCRGRTLIDAAALGGSEPVVSALLRAGAQPDVNVVSVSSKRSSLYTATVCGHKDAARRLITAGADVNFEDPTGS--ILGCLGNGGVTP---QIYACGSGXXXXXXXXXXXXXXXTIR-DVDRHSALDNAVCNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----------------------------------------------------XXTEGTTPLHRACYRQDIGVEATVDLLLQWGADETAVHNDGNTPADWLVENNNENGTTCSTAEIGRVRLLLARAPANRAWRRRCWLVMLRSCAKTARATTDKTGDADEGSNDVGDRKDGKCKGARRENGESAGGGVRSRMNGAGEVGVEGGASGLASIVASVVGLGPEEVFRSILSFL 453          
BLAST of mRNA_P-littoralis_Contig1274.3.1 vs. uniprot
Match: D8LS36_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS36_ECTSI)

HSP 1 Score: 230 bits (586), Expect = 1.830e-63
Identity = 248/456 (54.39%), Postives = 292/456 (64.04%), Query Frame = 1
Query:    1 EGLASQLFKLVAYGATPEQWEEWLRVPLEHAAFRGNLDLVNVLLGAGANGSAGWRGCRGRTLLDAAAVGGNGEVVSALIRAGAEPDVN*ASVSSGRSPLYAATYCGYEAAARRLILAGADVNFRDPVDKHPVL--CNAVRGGHTQLVNDLLISGADPSSPDEYRITPLDEAAVRGEVGSLSALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAARHHRCKAMLALLQNKAAVSSRIDSSGDTPLHRACCRQRRGLETAVDLLLRWGADETALNDRGRTPEQVMGSARARSSR--CSSNEVERARLLLVHTPADRSWRRRSLLVMLRSRAKNMKAAWDRRDTGGV------SGDKSYRTTAARQEGQ 1338
            +G+ S+++KLV+Y ATP+QW+EWLR+PLEHAA RGNL+LV+ LLGAGA+GSAGWRGCRGRTL+DAAA+GG+  VVS L+RAGA+ DVN  SVSS RS LY AT CG+E AARRL+ AGADV+F DPV  +PVL                                                  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX              A      KAM  LL + A+++++ D+ G+TPLH AC RQ +GLE  VDLLLRWGADETALN+ G+TP  ++      + R  CS  E+ R R+LL   PADR+WRRR  LVMLRS A+  KA  D  +TG        +GDK +R     +EG+
Sbjct:   11 QGMESEIWKLVSYSATPQQWKEWLRMPLEHAAARGNLNLVSSLLGAGADGSAGWRGCRGRTLIDAAALGGSEPVVSTLLRAGAQWDVNVVSVSSKRSALYTATMCGHEDAARRLVAAGADVDFEDPVHGNPVLHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTAGADVTIRDNCDHSALDSASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESSEGGSLAPPLFSATDPRNLKAMHTLLWHGASLTAQ-DTEGNTPLHVACYRQHKGLEAPVDLLLRWGADETALNNAGKTPAGLLDEHDNENDRTTCSEAEINRVRMLLARAPADRAWRRRCWLVMLRSFARTAKATTD--ETGDAHEGSNDAGDKEWREEQRGKEGE 463          
BLAST of mRNA_P-littoralis_Contig1274.3.1 vs. uniprot
Match: A0A6H5KNQ1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNQ1_9PHAE)

HSP 1 Score: 209 bits (533), Expect = 6.770e-58
Identity = 109/160 (68.12%), Postives = 128/160 (80.00%), Query Frame = 1
Query:    1 EGLASQLFKLVAYGATPEQWEEWLRVPLEHAAFRGNLDLVNVLLGAGANGSAGWRGCRGRTLLDAAAVGGNGEVVSALIRAGAEPDVN*ASVSSGRSPLYAATYCGYEAAARRLILAGADVNFRDPVDKHPVLCNAVRGGHTQLVNDLLISGADPSSPDE 480
            +GL S++FKLV+YGA+ EQW EWLRVPLEHAA RGN +LV  LL AGA+  AGWRGCRGRTLLDAAA+GGN +V+SALIR GA  DVN  +VSS RS L+ AT CG+EAAA+RL+L GADVNFRDPV K  VL  A++G HTQLVNDL I GA P+  D+
Sbjct:   11 DGLGSEVFKLVSYGASREQWAEWLRVPLEHAASRGNPNLVERLLQAGADAGAGWRGCRGRTLLDAAALGGNADVMSALIRGGAGADVNKVTVSSRRSALHTATCCGHEAAAKRLVLTGADVNFRDPVAKCSVLSQAIQGSHTQLVNDLPIGGARPNIRDD 170          
BLAST of mRNA_P-littoralis_Contig1274.3.1 vs. uniprot
Match: D8LRS0_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRS0_ECTSI)

HSP 1 Score: 208 bits (529), Expect = 1.030e-55
Identity = 232/509 (45.58%), Postives = 282/509 (55.40%), Query Frame = 1
Query:    1 EGLASQLFKLVAYGATPEQWEEWLRVPLEHAAFRGNLDLVNVLLGAGANGSAGWRGCRGRTLLDAAAVGGNGEVVSALIRAGAEPDVN*ASVSSGRSPLYAATYCGYEAAAR-------RLILAGADVNFRDPVDKHPVLCNAVRGGHTQLVNDLLISGADPSSPDEYRITPLDEAAVRGEVGSLSALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAARHHRCKAMLALLQNKAAVSSRIDSSGDTPLHRACCRQRRGLETAVDLLLRWGADETALNDRGRTPEQVMGSARARS--SRCSSNEVERARLLLVHTPADRSWRRRSLLVMLRSRAKNMKAAWDR-----RDTGGVSGDKSYRTTAARQEGQDCK---VR-RSDATGDGEHDRDGAGVGGVVALLVGLEPEAVFRSVIGFL 1473
            +G+ S+++KLV+YGATP+QW+EWLRVPLEHAA RGNL+LVN LL AGA+GSAGWRGC  RTL+DAAA+GG+  VVSAL+RAGA+PDVN  S+SS RS LY AT CG+E AAR        L+L GA  + +D     P++  A   GH  +VN LL +GAD                +  +V S SAL     XXXXXXXXXXXXXXXXX                        XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                                     D+ G+TPLHRAC  + +G+E  VDLLLR            +TP  ++      +  + CS  E ER RLLL   PA+R+WR R  LVMLRS AK  +A  D       D+      K  +   AR+E  +     VR R +  G+G  +R   G   VVA ++GL PE VFRS++GFL
Sbjct:   11 QGMESEIWKLVSYGATPQQWKEWLRVPLEHAAARGNLNLVNSLLEAGADGSAGWRGCLDRTLIDAAALGGSEPVVSALLRAGAQPDVNTVSISSKRSALYTATVCGHEHAARGLDRIVSALLLRGAYTDAQDTSGATPLIY-ACGSGHLSVVNTLLAAGADVD--------------IIRDVDSYSALDKAVCXXXXXXXXXXXXXXXXXNACDDAGFTPLHLAAQKDQPGAIDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQ----------------------------------------------------DTDGNTPLHRACYWRDKGMEATVDLLLRXXXXXXXXXXXXQTPVDMLDEHDDENDGTTCSEAEFERVRLLLARAPANRAWRHRCWLVMLRSCAKTARANSDATGDADEDSNDARDRKVGKCKGARRENGESAGGGVRSRMNGAGEGGVERRAGGWASVVASVIGLGPEEVFRSIVGFL 452          
BLAST of mRNA_P-littoralis_Contig1274.3.1 vs. uniprot
Match: A0A6H5JRY1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRY1_9PHAE)

HSP 1 Score: 200 bits (508), Expect = 5.230e-53
Identity = 246/516 (47.67%), Postives = 287/516 (55.62%), Query Frame = 1
Query:    1 EGLASQLFKLVAYGATPEQWEEWLRVPLEHAAFRGNLDLVNVLLGAGANGSAGWRGCRGRTLLDAAAVGGNGEVVSALIRAGAEPDVN*ASVSSGRSPLYAATYCGYEAAARRLILAGADVNFRDPVDKHPVLCNAVRGGHTQL------------VNDLLISGADPSSPDEYRITPLDEAAVRGEVGSLSALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAARHHRCKAMLALLQNKAAVSSRIDSSGDTPLHRACCRQRRGLETAVDLLLRWGADETALNDRGRTPEQVMGSARARSSR--CSSNEVERARLLLVHTPADRSWRRRSLLVMLRSRAKNMKAAWDRRDTGGVS-GDKSYRTT-------AARQEGQDCKV-RRSDATGDGEHDRD--GAGVGGVVALLVGLEPEAVFRSVIGFL 1473
            +G+ S+++KLV+Y ATP+QW+EWLRVPL+HAA RGNL+LVN LL AGA+GSAGW+G                          A+PDVN  SVSS RS LY AT CG+E AARRLI AGADVNF DPV    VL  A+ GGHTQL            VN LL +GA+ +       + LD+A            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                                                       G TPLH AC  Q RG+E  VDLLLRWGADETAL++  +TP  ++      + R  CS  E+E+ RLL+   PA+R+WRRR  LVMLRS AK  +A  +   TG    G K            A R+ G+      RS   G GE   D   AG+  +V  +VGLEPE VFRS++GFL
Sbjct:   11 QGMESEIWKLVSYSATPQQWKEWLRVPLKHAAARGNLNLVNSLLEAGADGSAGWKG--------------------------AQPDVNVLSVSSKRSALYTATVCGHEDAARRLITAGADVNFDDPVHCSHVLYEAILGGHTQLLTLSCESGHLSVVNTLLTAGANVTIRSIGGYSALDKAVFNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------------------------------------------------------------------XXXXGGTPLHWACYWQVRGVEATVDLLLRWGADETALDNDSKTPADLLDEDDNENDRTTCSEAEIEQVRLLMARAPANRAWRRRCWLVMLRSYAKTARATTEA--TGDADEGSKXXXXXXXXXXXXARRENGESAGGWLRSRMNGAGEVGVDIGAAGLASIVNSVVGLEPEEVFRSIVGFL 431          
BLAST of mRNA_P-littoralis_Contig1274.3.1 vs. uniprot
Match: D7FXA8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXA8_ECTSI)

HSP 1 Score: 201 bits (510), Expect = 1.220e-52
Identity = 169/498 (33.94%), Postives = 223/498 (44.78%), Query Frame = 1
Query:   16 QLFKLVAYGATPEQWEEWLRVPLEHAAFRGNLDLVNVLLGAGANGSAGWRGCRGRTLLDAAAVGGNGEVVSALIRAGAEPDVN*ASVSSGRSPLYAATYCGYEAAARRLILAGADVNFRDPVDKHPVLCNAVRGGHTQLVNDLLISGADPSSPDEYRI---TPLDEAAVRGEVGSLSALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAARHHRCKAMLALLQNKAAVSSRIDSSGDTPLHRACCRQRRGLETAVDLLLRWGADETALNDRGRTPEQVMGSARAR--SSRCSSN----EVERARLLLVHTPADRSWRRRSLLVMLRSRA-KNMKAAWDRRDTGGVSGDKSYRTTAARQEGQDCKVRRSDATGDGEHDRDGAGVG--GVVALLVGLEPEAVFRSVIGFL 1473
            ++FK+V+ GATPEQW  WLR PLEHAA  GNL+LV+ LL AG +G AGWRGCRGR+LLDAAA+GGN  V+SAL++AG  PDVN  + S+GRS LY +    +EAAAR+LILAGADVNF D  DK   L  AV+ G   LV +LL++GA+P+    +     TPL  AA +G   + S L                                                                                                                       AA     +A+LALL+  A V    D  G T LH     +    +  VD+LLR GA E A++  G+ P  +    + R  S+R   +    E+ERA  LL   PADR+WRRR  L+MLR R  K       RR  G   G+         + G    VRRS  +      R    V   G+V++LV LE + VFR+++G++
Sbjct:   14 EIFKIVSEGATPEQWARWLRAPLEHAAASGNLNLVDRLLKAGVDGKAGWRGCRGRSLLDAAALGGNAGVMSALLQAGCGPDVNVVASSTGRSALYQSVLGKHEAAARKLILAGADVNFVDRADKAGPLFAAVKAGCDDLVGNLLMAGANPNVIVRHSFGHGTPLHAAAKQGLANTASVLLSSPSTDKNGHVATVKVLLAAGADTDIRDLDSHSALVFAAQYERIDVMKALLEHGVDVNVGEDHWNPLHWAAQFNSTGCITVLLDAGADIDVKCSFLDGRTSLHF--------------AAETGNNEALLALLRRGANVHQTTDD-GSTALHLVSEMEGHAPDDTVDILLRRGASEQAVDRNGKAPVDLFKRVQRRFQSARPMGDSEWPELERAIELLARAPADRTWRRRCWLIMLRERTNKERTIHGGRRRKGKKVGNGEGLLLGDGKRGGSNNVRRSGRSRGRGGGRAAVEVDLRGLVSVLVCLESDGVFRTILGYI 496          
BLAST of mRNA_P-littoralis_Contig1274.3.1 vs. uniprot
Match: D8LE08_ECTSI (Similar to ankyrin 2,3/unc44, partial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE08_ECTSI)

HSP 1 Score: 196 bits (497), Expect = 2.380e-51
Identity = 162/426 (38.03%), Postives = 201/426 (47.18%), Query Frame = 1
Query:    1 EGLASQLFKLVAYGATPEQWEEWLRVPLEHAAFRGNLDLVNVLLGAGANGSAGWRGCRGRTLLDAAAVGGNGEVVSALIRAGAEPDVN*ASVSSGRSPLYAATYCGYEAAARRLILAGADVNFRDPVDKHPVLCNAVRGGHTQLVNDLLISGADPSSPDEYRITPLDEAAVRGEVGSLSALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAARHHRCKAMLALLQNKAAVSSRIDSSGDTPLHRAC--CRQRRGLETAVDLLLRWGADETALNDRGRTPEQVM--GSARARSSRCS-------SNEVERARLLLVHTPADRSWRRRSLLVMLRSRA 1245
            EG   ++FKL+++ ATPEQW +WLR PLEHAA RGN+ LV  LL AGA+G AGWRGCRGRT+LDAA              +G  PDVN  SVSS RS L+ A  CG+EAAAR L++AGA++   DP D+      A  GGH  LV +LLI GA P+S   +  TPL  AA  G    +S L                                                                  XXXXXXXXXXXX                                         +A H   + M+ALL+ +     + D++G + LH AC  C    G  TAVDLLLRWGA ETAL+ RG TP   +  G+A   SS  +         E++RA +LL   PADR+WRRR  LVMLR+RA
Sbjct:   11 EGAEVEIFKLLSFCATPEQWADWLRAPLEHAAARGNIGLVERLLEAGADGRAGWRGCRGRTMLDAAXXXXXXXXXXXXXXSGCAPDVNVVSVSSKRSALHLAVVCGHEAAARTLMIAGANIRRVDPGDQCVPFHVAAEGGHGDLVGNLLIGGACPNSRTRFGRTPLHVAAAVGNSRVVSTLLGDTSTSINARDNDLHSPLMLASANGHRSTVEALLRAGADTTLRCYSGGVSDMAALEMAGGEVVDVXXXXXXXXXXXXAGGSIPLHA--------------------------------SAVHGHDETMVALLKREGNFDEQ-DNAGRSALHWACIGCLSGTG-RTAVDLLLRWGASETALDTRGETPSDYLRRGAAAVASSNVTPRNSEKMQREMQRALVLLARAPADRAWRRRCWLVMLRARA 402          
BLAST of mRNA_P-littoralis_Contig1274.3.1 vs. uniprot
Match: D8LBP9_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBP9_ECTSI)

HSP 1 Score: 194 bits (494), Expect = 2.700e-50
Identity = 168/415 (40.48%), Postives = 198/415 (47.71%), Query Frame = 1
Query:    1 EGLASQLFKLVAYGATPEQWEEWLRVPLEHAAFRGNLDLVNVLLGAGANGSAGWRGCRGRTLLDAAAVGGNGEVVSALIRAGAEPDVN*ASVSSGRSPLYAATYCGYEAAARRLILAGADVNFRDPVDKHPVLCNAVRGGHTQLVNDLLISGADPSSPDEYRITPLDEAAVRGEVGSLSALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAARHHRC-KAMLALLQNKAAVSSRIDSSGDTPLHRACCRQRRGLETAVDLLLRWGADETALNDRGRTPEQVMGSARARSSRCSSNEVERARLLLVHTPADRSWRRRSLLVMLRSR 1242
            EG    +F L++YGATPEQW EWLR PLEHAA RG   LV  LL AGA+G AGW GCRGRTLLDAAA+GGN +VV+ L+RAG  PDVN  SVSS RS L+ +  CG+EAAAR+LILAGAD N  DP                            P++ D    TPL  AA  G+   ++ L                                                  XXXXXXXXXXXXXXXXXXXXXXX                                              A       +A+  LL+    VS  +D    T LH AC     G +  VDLLLRWG  E  L+  G TP  ++  A   SSR  + EVERA +LL + PADR+WRRRS LVMLR+R
Sbjct:    9 EGAEVGIFTLLSYGATPEQWREWLRAPLEHAAARGEFVLVEKLLNAGADGGAGWSGCRGRTLLDAAALGGNPDVVTTLLRAGCLPDVNVVSVSSRRSALHLSAVCGHEAAARKLILAGADANRVDPAXXXXXXXXXXXXXXXXXXXXXXXXXXXPNARDLLGRTPLHRAAYMGQDMVVAVLTDMPSTDKDILDKSGLSPLTVASQRGHLSTVKTLLNAGADVSMRTGHRNSXXXXXXXXXXXXXXXXXXXXXXXVNASKHGYTALHAGCAMNQAGAMDVLLDAGADMDRKCYGASTPLCVAIEFGASVQAVHTLLRRGCQVSGPMDK---TMLHLACMTMAPGFDAIVDLLLRWGVSELTLDKGGNTPAALLSVAEGSSSR-KAREVERAHVLLANAPADRAWRRRSWLVMLRAR 419          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1274.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FLL7_ECTSI7.020e-9246.26Ankyrin repeat protein n=1 Tax=Ectocarpus siliculo... [more]
A0A6H5K1F4_9PHAE3.870e-6935.86Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LRZ8_ECTSI1.950e-6452.69Ankyrin repeat protein n=1 Tax=Ectocarpus siliculo... [more]
D8LS36_ECTSI1.830e-6354.39Ankyrin repeat protein n=1 Tax=Ectocarpus siliculo... [more]
A0A6H5KNQ1_9PHAE6.770e-5868.13Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LRS0_ECTSI1.030e-5545.58Ankyrin repeat protein n=1 Tax=Ectocarpus siliculo... [more]
A0A6H5JRY1_9PHAE5.230e-5347.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FXA8_ECTSI1.220e-5233.94Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LE08_ECTSI2.380e-5138.03Similar to ankyrin 2,3/unc44, partial n=1 Tax=Ecto... [more]
D8LBP9_ECTSI2.700e-5040.48Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus si... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1274contigP-littoralis_Contig1274:20..3586 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FLL7
PFAMsAnk,Ank_2,PGG
Model size2403
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons2
Evalue2.81e-43
EggNOG OGsCOG0666@1|root,KOG0504@2759|Eukaryota
Descriptionprotein ubiquitination
Cds size549
COG categoryI
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789566.3404858-UTR-P-littoralis_Contig1274:19..9461680789566.3404858-UTR-P-littoralis_Contig1274:19..946Pylaiella littoralis U1_48UTRP-littoralis_Contig1274 20..946 +
1680789566.3601937-UTR-P-littoralis_Contig1274:1495..15241680789566.3601937-UTR-P-littoralis_Contig1274:1495..1524Pylaiella littoralis U1_48UTRP-littoralis_Contig1274 1496..1524 +
1680789566.3682585-UTR-P-littoralis_Contig1274:2688..35861680789566.3682585-UTR-P-littoralis_Contig1274:2688..3586Pylaiella littoralis U1_48UTRP-littoralis_Contig1274 2689..3586 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789566.3519938-CDS-P-littoralis_Contig1274:946..14951680789566.3519938-CDS-P-littoralis_Contig1274:946..1495Pylaiella littoralis U1_48CDSP-littoralis_Contig1274 947..1495 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1274.3.1prot_P-littoralis_Contig1274.3.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig1274 947..1495 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig1274.3.1

>prot_P-littoralis_Contig1274.3.1 ID=prot_P-littoralis_Contig1274.3.1|Name=mRNA_P-littoralis_Contig1274.3.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=183bp
MLALLQNKAAVSSRIDSSGDTPLHRACCRQRRGLETAVDLLLRWGADETA
LNDRGRTPEQVMGSARARSSRCSSNEVERARLLLVHTPADRSWRRRSLLV
MLRSRAKNMKAAWDRRDTGGVSGDKSYRTTAARQEGQDCKVRRSDATGDG
EHDRDGAGVGGVVALLVGLEPEAVFRSVIGFL*
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mRNA from alignment at P-littoralis_Contig1274:20..3586+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig1274.3.1 ID=mRNA_P-littoralis_Contig1274.3.1|Name=mRNA_P-littoralis_Contig1274.3.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=3567bp|location=Sequence derived from alignment at P-littoralis_Contig1274:20..3586+ (Pylaiella littoralis U1_48)
GAAGGTCTGGCGAGCCAGCTATTCAAGCTTGTCGCCTACGGGGCGACACC CGAGCAGTGGGAAGAGTGGCTTCGGGTGCCTCTGGAGCACGCGGCTTTCC GTGGGAACCTTGATCTGGTCAACGTGCTGCTAGGGGCTGGGGCGAATGGG AGCGCGGGGTGGAGGGGCTGCCGCGGCCGAACTCTACTCGACGCGGCAGC AGTCGGCGGAAACGGGGAGGTGGTGTCGGCCTTGATCAGAGCAGGAGCTG AGCCGGATGTGAACTAGGCGTCCGTGTCCTCCGGGAGGTCCCCCCTCTAT GCCGCAACGTACTGTGGCTACGAAGCTGCTGCAAGACGGTTGATCCTTGC CGGGGCGGACGTGAACTTTCGGGACCCGGTGGACAAGCACCCTGTCCTCT GCAACGCTGTTCGAGGCGGTCACACGCAGCTGGTCAACGACCTGTTGATA AGCGGGGCCGACCCAAGCAGCCCAGACGAGTACAGGATAACCCCTCTCGA CGAAGCCGCCGTGAGAGGCGAGGTGGGGAGCCTGTCGGCCCTGTTACTGG CCAATGCAAACAAAGGCGCATGTAATGACTACGGGGAGTCAGCGCCATCA CTAGCTGTTCACTGTGGCGAGTTGGCAATCGTGGAGACTCTGTTGGCCGC TGGGGCTGATTCTAGCATTCGCCGTTTGGACACCTACTCGGCGCTTGATT TGTCCGCGGCCAAGGGACACATCCCTATCCTCAATGCCATCCTTCGGAGC GGGGCGGACCCGAATGCTCGTGATCCGATAGGCTGCACTCCGTTGCACAC CGCCACTTTGACCGACCAGGGGGGTTCGGTCCATACGCTGATCAAAGCTG GGGCCGACACCGAGCTCAAGGCTGACGGTGGGTGGACACCTCTGCACGCA GCAGCGAGGCATCACCGCTGCAAGGCCATGCTTGCGCTTTTGCAGAACAA AGCAGCCGTAAGTAGCCGGATCGATTCCTCCGGAGATACACCCTTGCACC GGGCTTGCTGTAGGCAGCGAAGGGGCTTGGAGACTGCCGTAGACCTCCTG TTGAGATGGGGAGCGGACGAGACAGCCCTAAACGACCGGGGTCGTACCCC CGAGCAAGTCATGGGTTCTGCCCGAGCGCGCAGCAGCCGTTGCTCATCCA ACGAAGTGGAACGCGCCCGCCTTCTGCTGGTTCATACTCCTGCGGACAGG TCGTGGCGTCGCCGGAGCTTGCTAGTGATGCTTCGCTCGCGCGCGAAAAA CATGAAGGCAGCTTGGGATCGTCGCGATACGGGTGGCGTATCCGGCGACA AATCTTACCGTACAACTGCTGCGCGTCAAGAGGGCCAAGATTGCAAAGTG CGGAGAAGTGACGCTACCGGCGACGGCGAACATGATCGTGACGGTGCGGG CGTGGGTGGTGTCGTTGCACTGCTGGTGGGGCTGGAGCCGGAGGCCGTGT TTCGCTCTGTCATCGGTTTCTTGTGAAGATGCTGGCGGCCCGAGAACTTT GCCTGGTACGTTGCACATTGGTGTTCCTTCTTGTGCGTAATAGGTTCGGC TCAAGGACACCCGGGAACGGGTCGGAGGACTTGTTCGGACTTTCCACAAT CGCCTCATCATTGTGGGTTTCCAAAGTCTATCTTTAGTACGAATGTACTA TCGCAGAGGTCTCTTAGAGGTAGTCACCGTTACCAATAGCTAGTGTCTAG GATCCAGGCCTTGAACGAAAAGTATCATTCAGATTCCTTGTTTTCGAGTT TTGAAACGAGCCCTTCTCCAATGAGTTCCTTGAGCAAGAAGGCGTAGTTC GAACGTTGCTAATAACGGCCGTGATTTCGGACGCCCTCGGCACGCACCAC CCGAAAAAGTAGGGCAAACTTGAGTTTTTACGGCTTTCAAATAATCACGG CGAATAGGTAGAGTGCGTGAGGAGAGAATTGCGCTGATATAGCGGTCGAA AGTACTCATGTATGCTCTGCTTTTTCGACTGCTGTGTGCTGGAAGCGCTG AAAACTACGGCTGCTACAGCGGCGTCCGAACTACGCCGCGTAGCTCACAG AACTCGATGAAGGAAAGCTCGTTTTAAAAATCGAAAACAAGTAATCTGTA GCTTGTCGCAAGGACTAGATCCCAGACGCTTGATATTGGTCACAGCGACT GCCTTTAGGAGTATTCTGCAACGGTAGATTCGTACGAATAATAGAGTCTG GAAACCAAGAGTAATAAAGCGTTTGTCGAAAGTCCAAAGAGCTCCCCCAA CCCTTTCCCGGGTGCCCCTTACAGCAGTAGCTTGGAGCAACGTTGTATAT TTACTTACTTGTGCATTTGCCTGGAAAGTTTGACGTTATAATTCCAATCT CGATATACTCACTTGATGGTGTGAAAAAGTGGTCTGGTATCGTGGCTTTT TACTTCATGCGCGTTCATGCGCGGCAAGCCATTGATTTTTGAAGTTTCCT GCCGGTGCTGTATGTTCCTGATATCGTCCATGCGTTGCACAAGCGCCCGC GCTGGGAGCTGTCACTGCGTGACAGCACGATATGAACCCTTGCACCTCAC ACCTGGTATTTTGTATGGTTCACGCTTCTACTCTTGATAGGTGGGTCCCC GCTGTTGGCCGCTCGCTGCTTTAATTTTGGTGTTGGTCCTTTGTGTCGTT TGCTCGATACAAAAATCAGGCCTTGGATATCAGGGGTCTCACAGCGCACT ACATGGCGTGCTACCCAAGGCATTGATGGAATGGCTTCACCTGGAGCAGG CGGTACTTCAGGTGGTCGTCGCTGCTCACACTCGCTACAGGGCAACCCTC AAGGGCCTCCAGAAGTTGGGTTACTTGTGTTTTGTGTTAATTGACACAAA TTGAAGGAGGAAAAAGGGTATCTTGTGATTCGTGCCACATCCACGATTGT AGTTCCAACTTCAAGAAAAATATTTGGCCTTCCTCTAGATTTGTCTGGTT TTGTCCTTGATTGAGGGGATTGTGGAGGGCGGCAGTATTGAGTGAAACCC TTCAGGCTGGGTCGCAAACCGCCCTTTAGAGCTGTGTGGCCACCGCCTGT GGGTGGTATTTCGCAACGGAACAAGTGTTGGCGTGTCTCCCCGCCTTCCG CGCTACGCCCACGCGCGCGTCGTTGATGAGATCAGGGCCACGTTCTGATA TGATCGTACTCTTCCTTCTGGTCGTCTGCCGTCAAGTGTTGCATCGGTTC TGGTCTGGAGTTCAGCCGACATCGAGCCGTCCGAAGATCGCGGGCGCTGT CAGTTTCCGAACTGCCCTACACGGTAAACGCTTCCACTGTAGCTTTCTCA GCAACGTTAGGTTGGTTCCAGATGAACCAAACTCAAACCTTAGTACTCCG TTGTTCGTGCTACAGAGCTCGTCGTACACGAGACCCAGCGGGGAATCGAT AGATATCGGGTTGGTTCTTGTGTGTCGCCTTGCTCGGAATGAACTACCTG GTGCATGAAATGTGCAGTTGATACAAGGAAACTTGTAACTGCAGTATTGT TGGTTGAAAGGGAAGGTAAGCTTGCTGAACTTTTGAGAAGCCGGTTGGGG CTGACTATTTTTTGCGG
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Coding sequence (CDS) from alignment at P-littoralis_Contig1274:20..3586+

>mRNA_P-littoralis_Contig1274.3.1 ID=mRNA_P-littoralis_Contig1274.3.1|Name=mRNA_P-littoralis_Contig1274.3.1|organism=Pylaiella littoralis U1_48|type=CDS|length=549bp|location=Sequence derived from alignment at P-littoralis_Contig1274:20..3586+ (Pylaiella littoralis U1_48)
ATGCTTGCGCTTTTGCAGAACAAAGCAGCCGTAAGTAGCCGGATCGATTC
CTCCGGAGATACACCCTTGCACCGGGCTTGCTGTAGGCAGCGAAGGGGCT
TGGAGACTGCCGTAGACCTCCTGTTGAGATGGGGAGCGGACGAGACAGCC
CTAAACGACCGGGGTCGTACCCCCGAGCAAGTCATGGGTTCTGCCCGAGC
GCGCAGCAGCCGTTGCTCATCCAACGAAGTGGAACGCGCCCGCCTTCTGC
TGGTTCATACTCCTGCGGACAGGTCGTGGCGTCGCCGGAGCTTGCTAGTG
ATGCTTCGCTCGCGCGCGAAAAACATGAAGGCAGCTTGGGATCGTCGCGA
TACGGGTGGCGTATCCGGCGACAAATCTTACCGTACAACTGCTGCGCGTC
AAGAGGGCCAAGATTGCAAAGTGCGGAGAAGTGACGCTACCGGCGACGGC
GAACATGATCGTGACGGTGCGGGCGTGGGTGGTGTCGTTGCACTGCTGGT
GGGGCTGGAGCCGGAGGCCGTGTTTCGCTCTGTCATCGGTTTCTTGTGA
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