prot_P-littoralis_Contig1273.4.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig1273.4.1
Unique Nameprot_P-littoralis_Contig1273.4.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length143
Homology
BLAST of mRNA_P-littoralis_Contig1273.4.1 vs. uniprot
Match: A0A6H5J842_9PHAE (Gag-Pol-p199 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J842_9PHAE)

HSP 1 Score: 286 bits (732), Expect = 7.150e-87
Identity = 139/142 (97.89%), Postives = 141/142 (99.30%), Query Frame = 0
Query:    1 MGEFPDVAHRDATLGFTEYAYTVGGVQPDVPRTIQEARASPDATKWNAAAEREMKSLSDRKVYKLVPRSAVPPERKRIKSKWVFKRKADGTFKGRVVAQDWNQVPGLDCGNTYAPVCRIQSVRMVACITVEFNLIFDQMDVT 142
            MGEFPDVAHRDATLGFTEYAYTVGGVQPDVPRTIQEARASPDATKWNAAAEREMKSLSDRKVYKLVPRSAVPPERKRIKSKWVFKRKADGTFKGRVVAQ WNQVPGLDCG+TYAPVCRIQSVRMVACITVEFNLIFDQMDV+
Sbjct: 1286 MGEFPDVAHRDATLGFTEYAYTVGGVQPDVPRTIQEARASPDATKWNAAAEREMKSLSDRKVYKLVPRSAVPPERKRIKSKWVFKRKADGTFKGRVVAQGWNQVPGLDCGSTYAPVCRIQSVRMVACITVEFNLIFDQMDVS 1427          
BLAST of mRNA_P-littoralis_Contig1273.4.1 vs. uniprot
Match: A0A6H5JYB5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYB5_9PHAE)

HSP 1 Score: 266 bits (680), Expect = 2.460e-80
Identity = 130/133 (97.74%), Postives = 132/133 (99.25%), Query Frame = 0
Query:   10 RDATLGFTEYAYTVGGVQPDVPRTIQEARASPDATKWNAAAEREMKSLSDRKVYKLVPRSAVPPERKRIKSKWVFKRKADGTFKGRVVAQDWNQVPGLDCGNTYAPVCRIQSVRMVACITVEFNLIFDQMDVT 142
            RDATLGFTEYAYTVGGVQPDVPRTIQEARASPDATKWNAAAEREMKSLSDRKVYKLVPRSAVPPERKRIKSKWVFKRKADGTFKGRVVAQ WNQVPGLDCG+TYAPVCRIQSVRMVACITVEFNLIFDQMDV+
Sbjct:  911 RDATLGFTEYAYTVGGVQPDVPRTIQEARASPDATKWNAAAEREMKSLSDRKVYKLVPRSAVPPERKRIKSKWVFKRKADGTFKGRVVAQGWNQVPGLDCGSTYAPVCRIQSVRMVACITVEFNLIFDQMDVS 1043          
BLAST of mRNA_P-littoralis_Contig1273.4.1 vs. uniprot
Match: A0A6H5KJH6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJH6_9PHAE)

HSP 1 Score: 264 bits (675), Expect = 3.350e-79
Identity = 129/133 (96.99%), Postives = 132/133 (99.25%), Query Frame = 0
Query:   10 RDATLGFTEYAYTVGGVQPDVPRTIQEARASPDATKWNAAAEREMKSLSDRKVYKLVPRSAVPPERKRIKSKWVFKRKADGTFKGRVVAQDWNQVPGLDCGNTYAPVCRIQSVRMVACITVEFNLIFDQMDVT 142
            RDATLGFTEYA+TVGGVQPDVPRTIQEARASPDATKWNAAAEREMKSLSDRKVYKLVPRSAVPPERKRIKSKWVFKRKADGTFKGRVVAQ WNQVPGLDCG+TYAPVCRIQSVRMVACITVEFNLIFDQMDV+
Sbjct: 1130 RDATLGFTEYAHTVGGVQPDVPRTIQEARASPDATKWNAAAEREMKSLSDRKVYKLVPRSAVPPERKRIKSKWVFKRKADGTFKGRVVAQGWNQVPGLDCGSTYAPVCRIQSVRMVACITVEFNLIFDQMDVS 1262          
BLAST of mRNA_P-littoralis_Contig1273.4.1 vs. uniprot
Match: A0A6H5KJN3_9PHAE (Gag-Pol-p199 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJN3_9PHAE)

HSP 1 Score: 262 bits (670), Expect = 5.300e-79
Identity = 128/133 (96.24%), Postives = 130/133 (97.74%), Query Frame = 0
Query:   10 RDATLGFTEYAYTVGGVQPDVPRTIQEARASPDATKWNAAAEREMKSLSDRKVYKLVPRSAVPPERKRIKSKWVFKRKADGTFKGRVVAQDWNQVPGLDCGNTYAPVCRIQSVRMVACITVEFNLIFDQMDVT 142
            RDATLGFTEYAYTVGG QPDVPRTIQEARASPD TKWNAAAEREMKSLSDRKVYKLVPRSAVPPERKRIKSKWVFKRKADGTFKGRVVAQ WNQVPGLDCG+TYAPVCRIQSVRMVACITVEFNLIFDQMDV+
Sbjct: 1005 RDATLGFTEYAYTVGGEQPDVPRTIQEARASPDTTKWNAAAEREMKSLSDRKVYKLVPRSAVPPERKRIKSKWVFKRKADGTFKGRVVAQGWNQVPGLDCGSTYAPVCRIQSVRMVACITVEFNLIFDQMDVS 1137          
BLAST of mRNA_P-littoralis_Contig1273.4.1 vs. uniprot
Match: A0A6H5KNH5_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNH5_9PHAE)

HSP 1 Score: 258 bits (660), Expect = 4.120e-78
Identity = 126/131 (96.18%), Postives = 128/131 (97.71%), Query Frame = 0
Query:   10 RDATLGFTEYAYTVGGVQPDVPRTIQEARASPDATKWNAAAEREMKSLSDRKVYKLVPRSAVPPERKRIKSKWVFKRKADGTFKGRVVAQDWNQVPGLDCGNTYAPVCRIQSVRMVACITVEFNLIFDQMD 140
            RDATLGFTEYA TVGGVQPDVPRTIQEARASPDATKWNAAAEREMKSLSDRKVYKLVPRS VPPERKRIKSKWVFKRKADGTFKGRVVAQ WNQVPGLDCG+TYAPVCRIQSVRMVACITV+FNLIFDQMD
Sbjct:  488 RDATLGFTEYASTVGGVQPDVPRTIQEARASPDATKWNAAAEREMKSLSDRKVYKLVPRSGVPPERKRIKSKWVFKRKADGTFKGRVVAQGWNQVPGLDCGSTYAPVCRIQSVRMVACITVDFNLIFDQMD 618          
BLAST of mRNA_P-littoralis_Contig1273.4.1 vs. uniprot
Match: A0A6H5KPN4_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPN4_9PHAE)

HSP 1 Score: 236 bits (602), Expect = 4.210e-74
Identity = 109/141 (77.30%), Postives = 125/141 (88.65%), Query Frame = 0
Query:    2 GEFPDVAHRDATLGFTEYAYTVGGVQPDVPRTIQEARASPDATKWNAAAEREMKSLSDRKVYKLVPRSAVPPERKRIKSKWVFKRKADGTFKGRVVAQDWNQVPGLDCGNTYAPVCRIQSVRMVACITVEFNLIFDQMDVT 142
            GEFPDVAHRD + GFTEYAY +G  QPD PRTI+EARA PD  +WNAAAERE+ SL +R+VYKLVPR+AVPP RKRIKSKWVFKRKADG+FKGR+VAQ WNQVPGLDCG+TYAPVCR+QS+RM+ACI V+FNL  DQMDV+
Sbjct:   21 GEFPDVAHRDGSFGFTEYAYAMGASQPDAPRTIEEARAMPDGEQWNAAAEREIASLKERQVYKLVPRTAVPPGRKRIKSKWVFKRKADGSFKGRLVAQGWNQVPGLDCGSTYAPVCRLQSIRMLACIVVQFNLELDQMDVS 161          
BLAST of mRNA_P-littoralis_Contig1273.4.1 vs. uniprot
Match: A0A6H5KL37_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL37_9PHAE)

HSP 1 Score: 234 bits (597), Expect = 6.660e-70
Identity = 109/141 (77.30%), Postives = 124/141 (87.94%), Query Frame = 0
Query:    2 GEFPDVAHRDATLGFTEYAYTVGGVQPDVPRTIQEARASPDATKWNAAAEREMKSLSDRKVYKLVPRSAVPPERKRIKSKWVFKRKADGTFKGRVVAQDWNQVPGLDCGNTYAPVCRIQSVRMVACITVEFNLIFDQMDVT 142
            GEFPDVAHRD + GFTE+AY +G  QPDVPRTI+EARA PD  +WNAAAERE+ SL +R+VYKLVPR+AVPP RKRIKSKWVFKRKA G+FKGR+VAQ WNQVPGLDCGNTYAPVCR QS+RM+ACI V+FNL  DQMDV+
Sbjct:  430 GEFPDVAHRDGSFGFTEHAYAMGASQPDVPRTIEEARAMPDGEQWNAAAEREIASLKERQVYKLVPRTAVPPGRKRIKSKWVFKRKAGGSFKGRLVAQGWNQVPGLDCGNTYAPVCRFQSIRMLACIAVQFNLELDQMDVS 570          
BLAST of mRNA_P-littoralis_Contig1273.4.1 vs. uniprot
Match: A0A6H5KWT4_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWT4_9PHAE)

HSP 1 Score: 222 bits (565), Expect = 3.840e-67
Identity = 102/141 (72.34%), Postives = 121/141 (85.82%), Query Frame = 0
Query:    2 GEFPDVAHRDATLGFTEYAYTVGGVQPDVPRTIQEARASPDATKWNAAAEREMKSLSDRKVYKLVPRSAVPPERKRIKSKWVFKRKADGTFKGRVVAQDWNQVPGLDCGNTYAPVCRIQSVRMVACITVEFNLIFDQMDVT 142
            GEFPDV HRD + GFTEYAY +G  QPDVP+TI+EARA PD  +WN AAERE+ SL +R+V+KLVPR+AVPP RKRIKSKWVFKRKADG+FKGR+V Q WNQVPGLD G+T+APVCR+QS+RM+AC  V+FNL  DQMDV+
Sbjct:   21 GEFPDVTHRDGSFGFTEYAYAMGASQPDVPQTIEEARAMPDGEQWNTAAEREIASLKERQVHKLVPRTAVPPGRKRIKSKWVFKRKADGSFKGRLVVQGWNQVPGLDYGSTFAPVCRLQSIRMLACTAVQFNLELDQMDVS 161          
BLAST of mRNA_P-littoralis_Contig1273.4.1 vs. uniprot
Match: A0A6H5JC75_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC75_9PHAE)

HSP 1 Score: 223 bits (569), Expect = 4.580e-65
Identity = 102/141 (72.34%), Postives = 122/141 (86.52%), Query Frame = 0
Query:    2 GEFPDVAHRDATLGFTEYAYTVGGVQPDVPRTIQEARASPDATKWNAAAEREMKSLSDRKVYKLVPRSAVPPERKRIKSKWVFKRKADGTFKGRVVAQDWNQVPGLDCGNTYAPVCRIQSVRMVACITVEFNLIFDQMDVT 142
            G+FPDVAHRD + GFTEYAY +G  QPDVPRTIQEARA+PD  +WN AAERE+ SL +R++Y+LVPR+AVPP RKR KSKWVFK KADG+FKGR+VAQ WNQ PGL CG+TYAPVCR+QS+RM+ACI V+FNL  DQMD++
Sbjct:  960 GDFPDVAHRDGSFGFTEYAYAMGASQPDVPRTIQEARATPDRAQWNTAAEREIASLKERQLYELVPRTAVPPGRKRTKSKWVFKSKADGSFKGRLVAQGWNQGPGLHCGSTYAPVCRLQSIRMLACIAVQFNLELDQMDMS 1100          
BLAST of mRNA_P-littoralis_Contig1273.4.1 vs. uniprot
Match: A0A6H5K8P9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8P9_9PHAE)

HSP 1 Score: 211 bits (536), Expect = 9.840e-64
Identity = 100/137 (72.99%), Postives = 114/137 (83.21%), Query Frame = 0
Query:    6 DVAHRDATLGFTEYAYTVGGVQPDVPRTIQEARASPDATKWNAAAEREMKSLSDRKVYKLVPRSAVPPERKRIKSKWVFKRKADGTFKGRVVAQDWNQVPGLDCGNTYAPVCRIQSVRMVACITVEFNLIFDQMDVT 142
            D   RD + GFTEYAY VG  QPDVPRTIQEARA PD  +WN AAERE+ SL +R+ YKLVPR+AVPP R+RIKSKWVFKRKADG+FKGR VAQ WNQVPGLDCG+TYAPVC +QS+RM+ACI V+FNL  DQM V+
Sbjct:   73 DDCARDGSFGFTEYAYAVGASQPDVPRTIQEARAMPDGAQWNTAAEREIASLKERQDYKLVPRTAVPPGRQRIKSKWVFKRKADGSFKGRRVAQGWNQVPGLDCGSTYAPVCSLQSIRMLACIAVQFNLELDQMHVS 209          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1273.4.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5J842_9PHAE7.150e-8797.89Gag-Pol-p199 n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
A0A6H5JYB5_9PHAE2.460e-8097.74Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KJH6_9PHAE3.350e-7996.99Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KJN3_9PHAE5.300e-7996.24Gag-Pol-p199 n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
A0A6H5KNH5_9PHAE4.120e-7896.18Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KPN4_9PHAE4.210e-7477.30Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KL37_9PHAE6.660e-7077.30Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KWT4_9PHAE3.840e-6772.34Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JC75_9PHAE4.580e-6572.34Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K8P9_9PHAE9.840e-6472.99Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 61..141
e-value: 7.0E-15
score: 55.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1273contigP-littoralis_Contig1273:30076..30504 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1273.4.1mRNA_P-littoralis_Contig1273.4.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig1273 29593..33207 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig1273.4.1 ID=prot_P-littoralis_Contig1273.4.1|Name=mRNA_P-littoralis_Contig1273.4.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=143bp
MGEFPDVAHRDATLGFTEYAYTVGGVQPDVPRTIQEARASPDATKWNAAA
EREMKSLSDRKVYKLVPRSAVPPERKRIKSKWVFKRKADGTFKGRVVAQD
WNQVPGLDCGNTYAPVCRIQSVRMVACITVEFNLIFDQMDVT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2