prot_P-littoralis_Contig1272.12.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig1272.12.1
Unique Nameprot_P-littoralis_Contig1272.12.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length93
Homology
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BLAST of mRNA_P-littoralis_Contig1272.12.1 vs. uniprot
Match: D7FM56_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM56_ECTSI)

HSP 1 Score: 117 bits (293), Expect = 3.400e-31
Identity = 68/88 (77.27%), Postives = 70/88 (79.55%), Query Frame = 0 
Query:    1 MSRRCVSVLLLVCIAQACLAFVPSWTATLRSSRSQPPASTPPAATSSLSQPSGATFLVFGTFGACGAHMVYPVRGITSLSALSEGNEE 88
            MSR CVSVLLLV IAQACLAFVPSWTAT RSSRSQPPASTP AAT SLSQPSG    VFG    CGA   YPV G+TSLSA+SEG EE
Sbjct:    1 MSRNCVSVLLLVGIAQACLAFVPSWTATFRSSRSQPPASTPAAATFSLSQPSGPICPVFGACDTCGAQFFYPVPGMTSLSAMSEGGEE 88
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1272.12.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FM56_ECTSI3.400e-3177.27Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..18
score: 6.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1272contigP-littoralis_Contig1272:37775..38053 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1272.12.1mRNA_P-littoralis_Contig1272.12.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig1272 37775..38053 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig1272.12.1 ID=prot_P-littoralis_Contig1272.12.1|Name=mRNA_P-littoralis_Contig1272.12.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=93bp
MSRRCVSVLLLVCIAQACLAFVPSWTATLRSSRSQPPASTPPAATSSLSQ
PSGATFLVFGTFGACGAHMVYPVRGITSLSALSEGNEEGAAAI
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