mRNA_P-littoralis_Contig1271.22.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig1271.22.1 vs. uniprot
Match: A0A6H5JV45_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV45_9PHAE) HSP 1 Score: 191 bits (484), Expect = 4.880e-57 Identity = 88/107 (82.24%), Postives = 95/107 (88.79%), Query Frame = 1
Query: 1 HQVPLLICPYKTYASVEQQEWSKRFESVRKDIECFFGRLKGRFRLFKTGILFNSREKIDNAWFTACIIHNMLLQFDGLANLEKDMNWTGKDGEADETTGPFPAQTTV 321
H+VP LICP+K YAS QQEWSKRFES+RKDIEC FGRLKGRFRLFKTGILF +REKIDNAWFTACIIHNML QFDGLANLEKD++W GKDGEAD+TTG FP T V
Sbjct: 287 HRVPSLICPFKEYASEAQQEWSKRFESIRKDIECLFGRLKGRFRLFKTGILFGTREKIDNAWFTACIIHNMLHQFDGLANLEKDVDWAGKDGEADQTTGAFPVPTAV 393
BLAST of mRNA_P-littoralis_Contig1271.22.1 vs. uniprot
Match: A0A6H5KRU1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRU1_9PHAE) HSP 1 Score: 179 bits (455), Expect = 3.390e-54 Identity = 84/111 (75.68%), Postives = 92/111 (82.88%), Query Frame = 1
Query: 1 HQVPLLICPYKTYASVEQQEWSKRFESVRKDIECFFGRLKGRFRLFKTGILFNSREKIDNAWFTACIIHNMLLQFDGLANLEKDMNWTGKDGEADETTGPFPAQTTVGSMD 333
H+VPLLICP+K YA+V +Q+WSKR ESVRKDIEC FGRLKGRFRLFKTGILF R KID+AWFTACIIHNMLL FDGL LE DM+W GKDGEAD TTG FPA T S +
Sbjct: 153 HRVPLLICPFKVYANVAEQQWSKRLESVRKDIECLFGRLKGRFRLFKTGILFGDRTKIDDAWFTACIIHNMLLAFDGLDQLEVDMDWEGKDGEADSTTGVFPAVTVADSAE 263
BLAST of mRNA_P-littoralis_Contig1271.22.1 vs. uniprot
Match: A0A6H5L0H2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0H2_9PHAE) HSP 1 Score: 179 bits (455), Expect = 9.260e-52 Identity = 84/111 (75.68%), Postives = 92/111 (82.88%), Query Frame = 1
Query: 1 HQVPLLICPYKTYASVEQQEWSKRFESVRKDIECFFGRLKGRFRLFKTGILFNSREKIDNAWFTACIIHNMLLQFDGLANLEKDMNWTGKDGEADETTGPFPAQTTVGSMD 333
H+VPLLICP+K YA+V +Q+WSKR ESVRKDIEC FGRLKGRFRLFKTGILF R KID+AWFTACIIHNMLL FDGL LE DM+W GKDGEAD TTG FPA T S +
Sbjct: 385 HRVPLLICPFKVYANVAEQQWSKRLESVRKDIECLFGRLKGRFRLFKTGILFGDRTKIDDAWFTACIIHNMLLAFDGLDQLEVDMDWEGKDGEADSTTGVFPAVTVADSAE 495
BLAST of mRNA_P-littoralis_Contig1271.22.1 vs. uniprot
Match: A0A6H5KFT7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFT7_9PHAE) HSP 1 Score: 135 bits (339), Expect = 4.770e-38 Identity = 64/80 (80.00%), Postives = 69/80 (86.25%), Query Frame = 1
Query: 7 VPLLICPYKTYASVEQQEWSKRFESVRKDIECFFGRLKGRFRLFKTGILFNSREKIDNAWFTACIIHNMLLQFDGLANLE 246
VPLLICP+K YA+V +Q+WSKR ESVRKDIEC FGRLKGRFRLFKTGILF R KID+A FTACIIHNMLL FDGL LE
Sbjct: 56 VPLLICPFKVYANVAEQQWSKRLESVRKDIECLFGRLKGRFRLFKTGILFGDRTKIDDACFTACIIHNMLLAFDGLDQLE 135
BLAST of mRNA_P-littoralis_Contig1271.22.1 vs. uniprot
Match: A0A6H5JY35_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY35_9PHAE) HSP 1 Score: 122 bits (307), Expect = 2.000e-32 Identity = 56/72 (77.78%), Postives = 63/72 (87.50%), Query Frame = 1
Query: 1 HQVPLLICPYKTYASVEQQEWSKRFESVRKDIECFFGRLKGRFRLFKTGILFNSREKIDNAWFTACIIHNML 216
H+VPLLICP+K YA+V +Q+WSKR ESVRKD+EC FGRLKGRFRLFKTGILF R KID+A FTACIIH ML
Sbjct: 164 HRVPLLICPFKVYANVAEQQWSKRLESVRKDMECLFGRLKGRFRLFKTGILFGDRTKIDDARFTACIIHTML 235
BLAST of mRNA_P-littoralis_Contig1271.22.1 vs. uniprot
Match: D7FV01_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV01_ECTSI) HSP 1 Score: 122 bits (305), Expect = 1.330e-31 Identity = 56/92 (60.87%), Postives = 72/92 (78.26%), Query Frame = 1
Query: 4 QVPLLICPYKTYASVEQQEWSKRFESVRKDIECFFGRLKGRFRLFKTGILFNSREKIDNAWFTACIIHNMLLQFDGLANLEKDMNWTGKDGE 279
++PLL+ P KT+ S+E+ S+R ESVRKDIEC FGR+KGR+RLF+ I F SREKIDNAW TACI+HNML +F+GL +E+D +W G GE
Sbjct: 150 KIPLLMPPIKTHNSIERHSCSRRMESVRKDIECCFGRVKGRWRLFRGNIPFGSREKIDNAWLTACILHNMLHKFNGLDEMEEDADWVGSAGE 241
BLAST of mRNA_P-littoralis_Contig1271.22.1 vs. uniprot
Match: A0A6H5KVL5_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVL5_9PHAE) HSP 1 Score: 121 bits (304), Expect = 1.720e-31 Identity = 55/96 (57.29%), Postives = 73/96 (76.04%), Query Frame = 1
Query: 7 VPLLICPYKTYASVEQQEWSKRFESVRKDIECFFGRLKGRFRLFKTGILFNSREKIDNAWFTACIIHNMLLQFDGLANLEKDMNWTGKDGEADETT 294
+PLLI P KT+ +VE+ +WS+R ES+RKDIEC FGR+KGR+RLF +LF++R+K+DNAWFTACI+HNML F+ L +E+D W G G E T
Sbjct: 159 IPLLIPPIKTHNTVEEHDWSRRLESMRKDIECCFGRVKGRWRLFGGDMLFSTRQKVDNAWFTACILHNMLHSFNRLDEMEEDGVWVGSAGRLGEAT 254
BLAST of mRNA_P-littoralis_Contig1271.22.1 vs. uniprot
Match: A0A6H5K604_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K604_9PHAE) HSP 1 Score: 116 bits (291), Expect = 6.010e-30 Identity = 51/88 (57.95%), Postives = 68/88 (77.27%), Query Frame = 1
Query: 4 QVPLLICPYKTYASVEQQEWSKRFESVRKDIECFFGRLKGRFRLFKTGILFNSREKIDNAWFTACIIHNMLLQFDGLANLEKDMNWTG 267
++PLLI P K +A+VE+ +WS+R ES+RKDIEC +GR+KGRFRLFK GIL+ +R+ IDN WFTACI+HNML +D L + + W G
Sbjct: 154 KIPLLIPPIKHHATVEEHDWSRRLESMRKDIECCYGRVKGRFRLFKAGILYKTRDSIDNPWFTACILHNMLHHYDKLDVMTEATGWQG 241
BLAST of mRNA_P-littoralis_Contig1271.22.1 vs. uniprot
Match: A0A6H5JU81_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU81_9PHAE) HSP 1 Score: 117 bits (292), Expect = 1.400e-29 Identity = 54/97 (55.67%), Postives = 71/97 (73.20%), Query Frame = 1
Query: 4 QVPLLICPYKTYASVEQQEWSKRFESVRKDIECFFGRLKGRFRLFKTGILFNSREKIDNAWFTACIIHNMLLQFDGLANLEKDMNWTGKDGEADETT 294
++PLLI P KT+ +VE+ WS+R ES+RKDIEC FGR+KG +RLF ILF++R K+DNAWFTACI+HNML F+ L +E+D +W G E T
Sbjct: 165 KIPLLIPPIKTHNTVEEHGWSRRLESMRKDIECCFGRVKGLWRLFGGDILFSTRPKVDNAWFTACILHNMLHSFNRLDEMEEDADWMGSAARLREAT 261
BLAST of mRNA_P-littoralis_Contig1271.22.1 vs. uniprot
Match: A0A6H5K7N8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7N8_9PHAE) HSP 1 Score: 116 bits (291), Expect = 1.730e-28 Identity = 58/111 (52.25%), Postives = 77/111 (69.37%), Query Frame = 1
Query: 4 QVPLLICPYKTYASVEQQEWSKRFESVRKDIECFFGRLKGRFRLFKTGILFNSREKIDNAWFTACIIHNMLLQFDGLANLEKDMNWTGKDGEADETTGPFPAQTTVGSMDV 336
++PLLI P KT+ +VE+ +WS+R ES+RKDIEC FGR+KGR+RLF ILF++R+K DNA FTACI+HNML F+ L +E+D +W G G E A +MDV
Sbjct: 217 KIPLLIPPIKTHNTVEEHDWSRRLESMRKDIECCFGRVKGRWRLFGGDILFSTRQKGDNACFTACILHNMLHSFNRLDEMEEDADWVGSAGRLGE------AAAVAAAMDV 321 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1271.22.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1271.22.1 >prot_P-littoralis_Contig1271.22.1 ID=prot_P-littoralis_Contig1271.22.1|Name=mRNA_P-littoralis_Contig1271.22.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=114bp HQVPLLICPYKTYASVEQQEWSKRFESVRKDIECFFGRLKGRFRLFKTGIback to top mRNA from alignment at P-littoralis_Contig1271:39523..39866- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig1271.22.1 ID=mRNA_P-littoralis_Contig1271.22.1|Name=mRNA_P-littoralis_Contig1271.22.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=344bp|location=Sequence derived from alignment at P-littoralis_Contig1271:39523..39866- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig1271:39523..39866- >mRNA_P-littoralis_Contig1271.22.1 ID=mRNA_P-littoralis_Contig1271.22.1|Name=mRNA_P-littoralis_Contig1271.22.1|organism=Pylaiella littoralis U1_48|type=CDS|length=342bp|location=Sequence derived from alignment at P-littoralis_Contig1271:39523..39866- (Pylaiella littoralis U1_48)back to top |