mRNA_P-littoralis_Contig1270.5.2 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig1270.5.2 vs. uniprot
Match: D8LMH2_ECTSI (Protein yippee-like n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMH2_ECTSI) HSP 1 Score: 150 bits (380), Expect = 9.020e-40 Identity = 67/111 (60.36%), Postives = 82/111 (73.87%), Query Frame = 1
Query: 193 VPRVEIRIIEEPKVYACVGCKTHLSTEGNVISKDFTTQTGRGFLITDVVNVTNGPSLTRSLRTGKHVCEDVSCAGCDATVGWEYKDTEEKMQKYKIGKFVLEQAKITKHDW 525
+PRV R IEEP+V+AC CKTHLSTEGN+ SKDFTTQ GRGFLI ++NVTNGPS RSLRTG HVC+DV C CD VGW+Y + ++YK+G FVL+ K+ + W
Sbjct: 1 MPRVLTRFIEEPQVFACANCKTHLSTEGNIESKDFTTQNGRGFLINKLINVTNGPSADRSLRTGMHVCQDVYCVTCDTNVGWKYIKAFNQTERYKVGNFVLDAVKVINYHW 111
BLAST of mRNA_P-littoralis_Contig1270.5.2 vs. uniprot
Match: F0Z7V6_DICPU (Protein yippee-like n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F0Z7V6_DICPU) HSP 1 Score: 104 bits (260), Expect = 6.000e-23 Identity = 47/97 (48.45%), Postives = 65/97 (67.01%), Query Frame = 1
Query: 226 PKVYACVGCKTHLSTEGNVISKDFTTQTGRGFLITDVVNVTNGPSLTRSLRTGKHVCEDVSCAGCDATVGWEYKDTEEKMQKYKIGKFVLEQAKITK 516
P ++ CV CKTHL+ +ISK F + G FL D VNV+ GPS R+L TG H+ D+SC C +GW+Y+ +E+ QKYK+GK++LE+AKI K
Sbjct: 12 PNIFCCVNCKTHLTLHEQLISKQFQGRHGTAFLFGDCVNVSVGPSEDRTLTTGMHIVADISCIDCGDILGWKYEFAKEESQKYKVGKYILEKAKIQK 108
BLAST of mRNA_P-littoralis_Contig1270.5.2 vs. uniprot
Match: A0A6A6PYD7_9PEZI (Protein yippee-like n=1 Tax=Neohortaea acidophila TaxID=245834 RepID=A0A6A6PYD7_9PEZI) HSP 1 Score: 101 bits (252), Expect = 4.350e-22 Identity = 45/95 (47.37%), Postives = 60/95 (63.16%), Query Frame = 1
Query: 217 IEEPKVYACVGCKTHLSTEGNVISKDFTTQTGRGFLITDVVNVTNGPSLTRSLRTGKHVCEDVSCAGCDATVGWEYKDTEEKMQKYKIGKFVLEQ 501
+ PK+Y C CKTHL+ +IS++F Q G+ FL VVN+ GP+ R++ TGKHV D+SC C VGW+Y E +KYK GKF+LEQ
Sbjct: 9 LTSPKIYGCKTCKTHLADHDEIISRNFRGQHGKAFLFNSVVNIAEGPAGERNMTTGKHVVRDISCRQCREVVGWKYDRAFESSEKYKEGKFILEQ 103
BLAST of mRNA_P-littoralis_Contig1270.5.2 vs. uniprot
Match: A0A6A5BX87_NAEFO (Protein yippee-like n=2 Tax=Naegleria TaxID=5761 RepID=A0A6A5BX87_NAEFO) HSP 1 Score: 100 bits (250), Expect = 9.120e-22 Identity = 45/108 (41.67%), Postives = 64/108 (59.26%), Query Frame = 1
Query: 199 RVEIRIIEEPKVYACVGCKTHLSTEGNVISKDFTTQTGRGFLITDVVNVTNGPSLTRSLRTGKHVCEDVSCAGCDATVGWEYKDTEEKMQKYKIGKFVLEQAKITKHD 522
R+ ++ + +Y C C +HLS +ISK F + G+ +L +NVT GP R L TG HV D+ C C A VGW+YK E ++YK+GKFVLE+AK+ K +
Sbjct: 3 RLYLKYLNGSSIYVCSNCNSHLSMNDEIISKHFHGRFGKAYLFNKAINVTTGPCEERQLMTGLHVVCDIYCVNCKANVGWKYKKAYESSEQYKVGKFVLEKAKLKKEN 110
BLAST of mRNA_P-littoralis_Contig1270.5.2 vs. uniprot
Match: A0A1Y2HGX4_9FUNG (Protein yippee-like n=1 Tax=Catenaria anguillulae PL171 TaxID=765915 RepID=A0A1Y2HGX4_9FUNG) HSP 1 Score: 100 bits (250), Expect = 1.020e-21 Identity = 46/95 (48.42%), Postives = 62/95 (65.26%), Query Frame = 1
Query: 229 KVYACVGCKTHLSTEGNVISKDFTTQTGRGFLITDVVNVTNGPSLTRSLRTGKHVCEDVSCAGCDATVGWEYKDTEEKMQKYKIGKFVLEQAKIT 513
K++ C GC THLST ++ISK F QTGR +L + VVN++ GP RS+ TG HV DV C C T+GW Y E+ Q+YK GK++LE+ +T
Sbjct: 17 KIFGCGGCHTHLSTYNDIISKQFQGQTGRAYLFSKVVNISEGPCEERSMTTGLHVVRDVFCLTCGRTLGWTYVHAYEESQRYKEGKYILEKLLLT 111
BLAST of mRNA_P-littoralis_Contig1270.5.2 vs. uniprot
Match: A0A8J4PT41_9MYCE (Protein yippee-like n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4PT41_9MYCE) HSP 1 Score: 100 bits (250), Expect = 1.360e-21 Identity = 45/97 (46.39%), Postives = 64/97 (65.98%), Query Frame = 1
Query: 226 PKVYACVGCKTHLSTEGNVISKDFTTQTGRGFLITDVVNVTNGPSLTRSLRTGKHVCEDVSCAGCDATVGWEYKDTEEKMQKYKIGKFVLEQAKITK 516
P ++ C+ CKTHLS +ISK F + G +L D VNV+ GPS R+L TG H+ D+ C C +GW+Y+ +++ QKYK+GKF+LE+AKI K
Sbjct: 12 PSIFCCINCKTHLSLHEQLISKAFQGRHGPAYLFGDCVNVSVGPSEDRTLTTGMHIVADIYCIDCGDILGWKYEFAKDESQKYKVGKFILEKAKIQK 108
BLAST of mRNA_P-littoralis_Contig1270.5.2 vs. uniprot
Match: W7TVT6_9STRA (Protein yippee-like n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TVT6_9STRA) HSP 1 Score: 100 bits (248), Expect = 2.080e-21 Identity = 50/111 (45.05%), Postives = 67/111 (60.36%), Query Frame = 1
Query: 211 RIIEEPKVYACVGCKTHLSTEGNVISKDFTTQTGRGFLITDVVNVTNGPSLTRSLRTGKHVCEDVSCAGCDATVGWEYKDTEEKMQKYKIGKFVLEQAKITKHDWGRDKDG 543
R ++ P+++ C C THLST +ISK FT + GR FL V+NVT G R L TG H D+ C C A +GW+Y++ E+ QKYK GK++LE+ ITK D DG
Sbjct: 15 RYLDGPQIWCCSQCWTHLSTNDQIISKQFTGRGGRAFLYDKVINVTTGQHEKRMLITGLHTVADIFCLDCQALLGWKYEEAFEESQKYKEGKYILEKTCITK-----DPDG 120
BLAST of mRNA_P-littoralis_Contig1270.5.2 vs. uniprot
Match: A0A1Q3C5G0_CEPFO (Protein yippee-like n=1 Tax=Cephalotus follicularis TaxID=3775 RepID=A0A1Q3C5G0_CEPFO) HSP 1 Score: 100 bits (248), Expect = 2.620e-21 Identity = 45/96 (46.88%), Postives = 62/96 (64.58%), Query Frame = 1
Query: 223 EPKVYACVGCKTHLSTEGNVISKDFTTQTGRGFLITDVVNVTNGPSLTRSLRTGKHVCEDVSCAGCDATVGWEYKDTEEKMQKYKIGKFVLEQAKI 510
E KVY+C C THL+ ++ISK F + G+ +L VVN+T G R +RTG H D+ C GC + VGW+Y+ EK+QKYK GKF+LE+ K+
Sbjct: 10 EGKVYSCKHCNTHLALSDDIISKSFYCRHGKAYLFDKVVNITVGEKEERMMRTGLHTVVDIFCVGCGSIVGWKYESANEKLQKYKEGKFILERFKV 105
BLAST of mRNA_P-littoralis_Contig1270.5.2 vs. uniprot
Match: UPI000B463215 (protein yippee-like At4g27745 n=1 Tax=Hordeum vulgare subsp. vulgare TaxID=112509 RepID=UPI000B463215) HSP 1 Score: 100 bits (250), Expect = 3.800e-21 Identity = 47/115 (40.87%), Postives = 65/115 (56.52%), Query Frame = 1
Query: 181 DWIVVPRVEIRIIEEPKVYACVGCKTHLSTEGNVISKDFTTQTGRGFLITDVVNVTNGPSLTRSLRTGKHVCEDVSCAGCDATVGWEYKDTEEKMQKYKIGKFVLEQAKITKHDW 525
DW+ E + P+VY C C+ H+ ++ISKDF + GR FL +NVT G R L TG H D+ C C +GW+Y+ E+ QKYK G+F+ EQAKIT+ +W
Sbjct: 56 DWL-----ETSELVGPRVYTCSHCRNHVCLHDDIISKDFQGRNGRAFLSYHAMNVTTGSKEDRQLMTGLHTIADIHCCDCQEVLGWKYERAYEESQKYKEGRFIFEQAKITQENW 165
BLAST of mRNA_P-littoralis_Contig1270.5.2 vs. uniprot
Match: Q55FR5_DICDI (Protein yippee-like n=1 Tax=Dictyostelium discoideum TaxID=44689 RepID=Q55FR5_DICDI) HSP 1 Score: 99.0 bits (245), Expect = 6.670e-21 Identity = 44/97 (45.36%), Postives = 62/97 (63.92%), Query Frame = 1
Query: 226 PKVYACVGCKTHLSTEGNVISKDFTTQTGRGFLITDVVNVTNGPSLTRSLRTGKHVCEDVSCAGCDATVGWEYKDTEEKMQKYKIGKFVLEQAKITK 516
P + C+ CKTHL+ +ISK F + G FL N+T GPS R+L TG H+ D+ C C T+GW+Y+ +E+ QKYK+GK++LE+AKI K
Sbjct: 12 PSIICCLNCKTHLTLHDQLISKQFQGRHGTAFLFGTCSNITVGPSEDRTLTTGMHIVADIYCIDCGETLGWKYEFAKEESQKYKVGKYILEKAKIQK 108 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1270.5.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1270.5.2 >prot_P-littoralis_Contig1270.5.2 ID=prot_P-littoralis_Contig1270.5.2|Name=mRNA_P-littoralis_Contig1270.5.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=134bp MALAEGDWIVVPRVEIRIIEEPKVYACVGCKTHLSTEGNVISKDFTTQTGback to top mRNA from alignment at P-littoralis_Contig1270:25910..31522- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig1270.5.2 ID=mRNA_P-littoralis_Contig1270.5.2|Name=mRNA_P-littoralis_Contig1270.5.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=5613bp|location=Sequence derived from alignment at P-littoralis_Contig1270:25910..31522- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig1270:25910..31522- >mRNA_P-littoralis_Contig1270.5.2 ID=mRNA_P-littoralis_Contig1270.5.2|Name=mRNA_P-littoralis_Contig1270.5.2|organism=Pylaiella littoralis U1_48|type=CDS|length=402bp|location=Sequence derived from alignment at P-littoralis_Contig1270:25910..31522- (Pylaiella littoralis U1_48)back to top |