mRNA_P-littoralis_Contig1270.3.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig1270.3.1
Unique NamemRNA_P-littoralis_Contig1270.3.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig1270.3.1 vs. uniprot
Match: A0A6H5JAU4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAU4_9PHAE)

HSP 1 Score: 430 bits (1105), Expect = 1.020e-146
Identity = 193/306 (63.07%), Postives = 243/306 (79.41%), Query Frame = 1
Query:    1 IPRAFFLRLVELSKEKNWFSDGGADAAGREGIPVELKILTALQILGRGNCFDDINQLSLMSKSMAAATFHKFCKNFAKEMFEEHIYLPTGTYQDEVMDCYRKLGFTGAIGSTDVTHVGWGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGRAIGVTQGFTGATNDKTIVRYDAAVQTIRNNKVYKDREYKLRKADGTEFTRKGCYLIVDNGYHEWVTLMAPSKYPGDVDDAAFSKMLESVRKDVECFFGILKGRFRILKLRLAYHCREDIDNIFFTCCILHNMLHSFDGMSVFKENVDWAGSAGLHD 918
            +P  FF+ LV L K+++WF  G  DA+GR GIPV+LK+L  LQIL RGNCF DI  +S +S   AAATFH+F + FA+EM+ EHI+LPTG YQ +VM  Y +LGF+GA GSTDVTH+ WGMCP+   RS+TGKEG+PT+A++VTVDH  R + VT GFTG+TNDK+I+RYD AV  IR + +Y ++E+ + +ADGT +  KGCYL+VDNGYH+WVTL+ PSKYP D +D AFSK LESVRKDVECFFGI+KGRFRILKL + YH +EDIDN+FFTCCILHNMLHS+D  S  +E  +WAG+AGLH+
Sbjct:  122 LPYPFFVELVALVKQRDWFPTGKQDASGRRGIPVQLKVLACLQILARGNCFADIYHMSFISMQTAAATFHRFTRYFAREMYAEHIFLPTGDYQKKVMTQYDRLGFSGATGSTDVTHIPWGMCPYNQARSYTGKEGYPTVAYQVTVDHTKRVLAVTPGFTGSTNDKSIIRYDTAVTKIREDPIYSEKEFTVYEADGTPYQLKGCYLLVDNGYHKWVTLIPPSKYPIDQNDLAFSKRLESVRKDVECFFGIVKGRFRILKLSIPYHKQEDIDNVFFTCCILHNMLHSYDNKSEMEEEPNWAGNAGLHN 427          
BLAST of mRNA_P-littoralis_Contig1270.3.1 vs. uniprot
Match: A0A6H5K796_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K796_9PHAE)

HSP 1 Score: 407 bits (1046), Expect = 1.960e-139
Identity = 189/264 (71.59%), Postives = 218/264 (82.58%), Query Frame = 1
Query:  127 QILGRGNCFDDINQLSLMSKSMAAATFHKFCKNFAKEMFEEHIYLPTGTYQDEVMDCYRKLGFTGAIGSTDVTHVGWGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGRAIGVTQGFTGATNDKTIVRYDAAVQTIRNNKVYKDREYKLRKADGTEFTRKGCYLIVDNGYHEWVTLMAPSKYPGDVDDAAFSKMLESVRKDVECFFGILKGRFRILKLRLAYHCREDIDNIFFTCCILHNMLHSFDGMSVFKENVDWAGSAGLHD 918
            Q+LG+GNCFDD+ QLS MSKSMA  TFHKFC++FA EMF+EHIYLPTGTY DEVM  + +LG+TGA GSTDVTH+GW MCPFTLGRSFTGKEGFPT+A++VTVDH GR + VT GFTGATNDKTI+RYD+ V  IR    Y +REYKLRKA+GT+  R+GC+LIVDNGYHEWVTL+APSKYP   +D AFS+ LESVRKDV CF        RILKLR+ YH RE +DNIFFTCCILHNMLH+FDG+ VF+EN DW GSAG HD
Sbjct:   42 QVLGKGNCFDDVEQLSKMSKSMAQPTFHKFCRHFAAEMFDEHIYLPTGTYLDEVMGIFHQLGWTGACGSTDVTHIGWNMCPFTLGRSFTGKEGFPTIAYDVTVDHDGRDLAVTNGFTGATNDKTIIRYDSGVNKIRTASQYTEREYKLRKANGTKRMRRGCFLIVDNGYHEWVTLIAPSKYPQRNEDTAFSRDLESVRKDVGCF--------RILKLRMPYHKREYVDNIFFTCCILHNMLHTFDGLDVFEENTDWTGSAGHHD 297          
BLAST of mRNA_P-littoralis_Contig1270.3.1 vs. uniprot
Match: A0A6H5JPH7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPH7_9PHAE)

HSP 1 Score: 405 bits (1040), Expect = 1.170e-136
Identity = 184/306 (60.13%), Postives = 232/306 (75.82%), Query Frame = 1
Query:    1 IPRAFFLRLVELSKEKNWFSDGGADAAGREGIPVELKILTALQILGRGNCFDDINQLSLMSKSMAAATFHKFCKNFAKEMFEEHIYLPTGTYQDEVMDCYRKLGFTGAIGSTDVTHVGWGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGRAIGVTQGFTGATNDKTIVRYDAAVQTIRNNKVYKDREYKLRKADGTEFTRKGCYLIVDNGYHEWVTLMAPSKYPGDVDDAAFSKMLESVRKDVECFFGILKGRFRILKLRLAYHCREDIDNIFFTCCILHNMLHSFDGMSVFKENVDWAGSAGLHD 918
            +P  FF+ LVEL ++++WF  G +D  GR+ +PVELK+L  LQIL RGN F DI  +S +S    A+TFH+FCK FA E+++E++YLPTG    +VM+ Y ++GF GA+GSTDVTH+ WGMCP+   R +TGKEG PT+AF+VTVDH+GR + VT+GFTGATNDKTI+RYD AV  IR + VY +++YKL   DG +F  KGCYL+VDNGYH+W TL+ PSK P D  D  FSK LES RKDVEC+FGILKGRFRI KL + +H +E IDN+FFTCCILHNMLHSFD      E  +WAGSAGLH+
Sbjct:  138 VPYPFFVHLVELVRDRDWFPTGESDVTGRQAVPVELKVLACLQILSRGNVFADIYHMSFISFQTVASTFHRFCKYFAAELYDEYVYLPTGEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNMLHSFDNRGDMSEEPNWAGSAGLHN 443          
BLAST of mRNA_P-littoralis_Contig1270.3.1 vs. uniprot
Match: A0A6H5KSI7_9PHAE (DDE Tnp4 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSI7_9PHAE)

HSP 1 Score: 397 bits (1019), Expect = 2.560e-135
Identity = 192/285 (67.37%), Postives = 221/285 (77.54%), Query Frame = 1
Query:    1 IPRAFFLRLVELSKEKNWFSDGGADAAGREGIPVELKILTALQILGRGNCFDDINQLSLMSKSMAAATFHKFCKNFAKEMFEEHIYLPTGTYQDEVMDCYRKLGFTGAIGSTDVTHVGWGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGRAIGVTQGFTGATNDKTIVRYDAAVQTIRNNKVYKDREYKLRKADGTEFTRKGCYLIVDNGYHEWVTLMAPSKYPGDVDDAAFSKMLESVRKDVECFFGILKGRFRILKLRLAYHCREDIDNIFFTCCILHNMLHS 855
            +P  FF  LV+LS+ K WFS G  DAA REGIP+ELK+L      G+GNCFDD+ QLS MS+S+A A FHKFC++ A EMF+EHIYLPTGTY DEVM  + +LG TGA GSTDVTH+G  MCPFTLGRSFTGKEGFPT+A+EVTVDHAGRA+ VT GF G TNDKT +RYD+ V  IR    Y +REYKLRK +GTE TR+GC+LIVDNGY+E              +D AFS+ LESVRKDVECFFGILKGRFRILKLR+ YH RE IDNIFFTCCILHNMLH+
Sbjct:  102 VPYPFFQELVKLSRAKRWFSPGEKDAANREGIPLELKVL------GKGNCFDDVEQLSKMSESIAQALFHKFCRHSAAEMFDEHIYLPTGTYLDEVMGIFHQLGCTGACGSTDVTHIGRNMCPFTLGRSFTGKEGFPTIAYEVTVDHAGRALAVTNGFAGGTNDKTTIRYDSGVNKIRTESQYTEREYKLRKVNGTERTRRGCFLIVDNGYYE------------SNEDTAFSRHLESVRKDVECFFGILKGRFRILKLRMPYHKREYIDNIFFTCCILHNMLHT 368          
BLAST of mRNA_P-littoralis_Contig1270.3.1 vs. uniprot
Match: A0A6H5JHI0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHI0_9PHAE)

HSP 1 Score: 386 bits (992), Expect = 6.530e-131
Identity = 183/305 (60.00%), Postives = 223/305 (73.11%), Query Frame = 1
Query:    1 IPRAFFLRLVELSKEKNWFSDGGADAAGREGIPVELKILTALQILGRGNCFDDINQLSLMSKSMAAATFHKFCKNFAKEMFEEHIYLPT--GTYQDEVMDCYRKLGFTGAIGSTDVTHVGWGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGRAIGVTQGFTGATNDKTIVRYDAAVQTIRNNKVYKDREYKLRKADGTEFTRKGCYLIVDNGYHEWVTLMAPSKYPGDVDDAAFSKMLESVRKDVECFFGILKGRFRILKLRLAYHCREDIDNIFFTCCILHNMLHSFDGMSVFKENVDWAGSAG 909
            +P +FFLRLV L K K+WF+  G DAA R+  PVE K+L  L ILGRGNCF  I Q+S MS       FHKFCK+FA+EM++EHIYLP+      D VM  Y +LGF+GA+GS DVTH+GW  CP+ L RS+TGKEG PT+ ++VTV+HAGRAI VT+GFT +TNDKT V +DA V+ IR +  Y ++ + +   DGT  T KGCYL+VDNGYH+W  LM P+KYP   +D  FSK LESVRKDVECFFGILKG FRI K+ +AYH +E IDN+FFTCCILHNMLH+FDGM    EN  W  SAG
Sbjct:   62 VPDSFFLRLVALVKSKDWFTTSGCDAARRQSHPVEHKVLAWLTILGRGNCFASIYQVSWMSAKTVQTMFHKFCKHFAREMYDEHIYLPSEQNGELDHVMKQYDRLGFSGAMGSMDVTHIGWSKCPYNLARSYTGKEGVPTVGYQVTVNHAGRAIAVTEGFTDSTNDKTTVCWDAVVEKIRTDNQYTEKTFDVYNEDGTTTTLKGCYLLVDNGYHKWKILMEPTKYPLSENDILFSKRLESVRKDVECFFGILKGCFRIQKVAMAYHEQERIDNVFFTCCILHNMLHTFDGMDQLVENTLWVSSAG 366          
BLAST of mRNA_P-littoralis_Contig1270.3.1 vs. uniprot
Match: A0A6H5JBE2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBE2_9PHAE)

HSP 1 Score: 375 bits (962), Expect = 1.950e-125
Identity = 181/308 (58.77%), Postives = 221/308 (71.75%), Query Frame = 1
Query:    1 IPRAFFLRLVELSKEKNWFSDGGADAAGREGIPVELKILTALQILGRGNCFDDINQLSLMSKSMAAATFHKFCKNFAKEMFEEHIYLPT--GTYQDEVMDCYRKLGFTGAIGSTDVTHVGWGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGRAIGVTQGFTGATNDKTIVRYDAAVQTIRNNKVYKDREYKLRKADGTEFTRKGCYLIVDNGYHEWVTLMAPSKYPGDVDDAAFSKMLESVRKDVECFFGILKGRFRILKLRLAYHCREDIDNIFFTCCILHNMLHSFDGMSVFKENVDWAGSAGLHD 918
            +P  FFLRLVEL K+K+WF+    DA GR   PVE K+L  L ILGRGN F  I  LS MS       FH+FC++FA EM++EHI+LP+      D VM  Y KLGF GA+GSTDVTH+GW  CP+  GRS+TGKEG PT+ ++VTV+HAGR + VT+GFTG+TNDKTI+  D AV  IR +K Y ++ + + K DGT  T KGCYLIVDNGYH+W  L+ PSKYP    D  FSK LESVRKDVECFFGILK RFRILKL + Y  +E +D +FFTCCILHNMLH+ DGM   +E+V+W GSA L +
Sbjct:   91 VPYPFFLRLVELVKKKDWFATTQRDAYGRRCHPVEHKVLACLTILGRGNVFGSIYNLSWMSTPTVQKVFHQFCEHFATEMYDEHIFLPSEENGELDRVMGQYEKLGFPGAMGSTDVTHIGWSRCPYNQGRSYTGKEGKPTVGYQVTVNHAGRVLAVTEGFTGSTNDKTIICCDEAVDRIRTDKQYAEKPFTVHKKDGTTETLKGCYLIVDNGYHKWRMLIEPSKYPLSEADLLFSKRLESVRKDVECFFGILKMRFRILKLAMTYQKQERLDYVFFTCCILHNMLHTHDGMGGLEEDVNWVGSAELQN 398          
BLAST of mRNA_P-littoralis_Contig1270.3.1 vs. uniprot
Match: A0A6H5KNX4_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNX4_9PHAE)

HSP 1 Score: 369 bits (947), Expect = 2.100e-123
Identity = 184/334 (55.09%), Postives = 220/334 (65.87%), Query Frame = 1
Query:    1 IPRAFFLRLVELSKEKNWFSDGGADAAGREGIPVELKILTALQILGRGNCFDDINQLSLMSKSMAAATFHKFCKNFAKEMFEEHIYLPT--GTYQDEVMDCYRKLGFTGAIGSTDVTHVGWGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGRAIGVTQGFTGATNDKTIVRYDAAVQTIRNNKVYK----------------------------DREYKLRKADGTEFTRKGCYLIVDNGYHEWVTLMAPSKYPGDVDDAAFSKMLESVRKDVECFFGILKGRFRILKLRLAYHCREDIDNIFFTCCILHNMLHSFDGMSVFKENVDWAGSAGL 912
            +P   FLRLV L K KNWFS    DA G    PVE K+L  L ILGRGNCF  I Q+S MS       FHKFC++FA+EM++E I+LPT      D VM  Y +LGFTGA+GS DVTH+ W  CP+   RS+TGKEGFPT+A++VTVDHAGRAI VT+GFTG+TNDKTIV +D AV+ I  +K Y                             ++ + +   DGT  T KGCYL+VDNGYH+W  L+ PSKYP   +D  FSK LESVRKDVECFFGILKGRFRILKL + Y  +E IDN+FFTC ILHNMLH+FDGM    EN +W  SAG+
Sbjct:   49 VPYTVFLRLVALVKSKNWFSTAVTDAVGWASHPVEHKVLAWLTILGRGNCFASIYQMSWMSAKTVQGMFHKFCRHFAREMYDEQIHLPTEESGKLDHVMKQYDRLGFTGAVGSMDVTHIAWSRCPYNQARSYTGKEGFPTIAYQVTVDHAGRAIAVTEGFTGSTNDKTIVCWDTAVEKIWTDKHYTXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKTFDVYNEDGTTTTLKGCYLLVDNGYHKWQILIEPSKYPLSENDLLFSKRLESVRKDVECFFGILKGRFRILKLAMEYQSQERIDNVFFTCYILHNMLHTFDGMDQLVENTNWVSSAGV 382          
BLAST of mRNA_P-littoralis_Contig1270.3.1 vs. uniprot
Match: A0A6H5KY50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY50_9PHAE)

HSP 1 Score: 363 bits (931), Expect = 1.970e-121
Identity = 167/274 (60.95%), Postives = 207/274 (75.55%), Query Frame = 1
Query:   97 PVELKILTALQILGRGNCFDDINQLSLMSKSMAAATFHKFCKNFAKEMFEEHIYLPTGTYQDEVMDCYRKLGFTGAIGSTDVTHVGWGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGRAIGVTQGFTGATNDKTIVRYDAAVQTIRNNKVYKDREYKLRKADGTEFTRKGCYLIVDNGYHEWVTLMAPSKYPGDVDDAAFSKMLESVRKDVECFFGILKGRFRILKLRLAYHCREDIDNIFFTCCILHNMLHSFDGMSVFKENVDWAGSAGLHD 918
            P   ++L  LQIL RGN F DI  +S +S    A+TFH+FCK FA E+++E++YLPTG    +VM+ Y ++GF GA+GSTDVTH+ WGMCP+   R +TGKEG PT+AF+VTVDH+GR + VT+GFTGATNDKTI+RYD AV  IR + VY +++YKL   DG +F  KGCYL+VDNGYH+W TL+ PSK P D  D  FSK LES RKDVEC+FGILKGRFRI KL + +H +E IDN+FFTCCILHNMLHSFD      E  +WAGSAGLH+
Sbjct:   79 PPHTQVLACLQILSRGNVFADIYHMSFISFQTVASTFHRFCKYFAAELYDEYVYLPTGEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNMLHSFDNRGDMSEEPNWAGSAGLHN 352          
BLAST of mRNA_P-littoralis_Contig1270.3.1 vs. uniprot
Match: A0A6H5K872_9PHAE (DDE Tnp4 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K872_9PHAE)

HSP 1 Score: 359 bits (921), Expect = 9.220e-120
Identity = 176/291 (60.48%), Postives = 204/291 (70.10%), Query Frame = 1
Query:   46 KNWFSDGGADAAGREGIPVELKILTALQILGRGNCFDDINQLSLMSKSMAAATFHKFCKNFAKEMFEEHIYLPTGTYQDEVMDCYRKLGFTGAIGSTDVTHVGWGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGRAIGVTQGFTGATNDKTIVRYDAAVQTIRNNKVYKDREYKLRKADGTEFTRKGCYLIVDNGYHEWVTLMAPSKYPGDVDDAAFSKMLESVRKDVECFFGILKGRFRILKLRLAYHCREDIDNIFFTCCILHNMLHSFDGMSVFKENVDWAGSAGLHD 918
            KNW S  G     R G  ++L +L      G+GNCFDD+ QLS MS SMA ATFHKFC++FA EMF+EHI+ PT TY DE M  + +LG TGA  STDVTH+   MCPFTLGRSFTGKEGFPT+A+EVTVDHA RA+ VT GFTGA NDKT++ YD+ V  IR    Y +R+YKLRKA+GTE TR+GC+ IVDNGYHE                            DVECFFGILKGRFRILKLR+ YH RE IDNIFFTCCI HNMLH+FDG+ +F+EN DW GSAG HD
Sbjct:   82 KNWSSWQGRSGGFRRGRRMQLTVL------GKGNCFDDVEQLSKMSISMAQATFHKFCRHFAAEMFDEHIFSPTETYLDEFMGIFHQLGCTGACRSTDVTHIDCNMCPFTLGRSFTGKEGFPTIAYEVTVDHASRALAVTNGFTGAMNDKTVIWYDSGVNDIRTESQYTERQYKLRKANGTERTRRGCFSIVDNGYHE----------------------------DVECFFGILKGRFRILKLRMPYHKREYIDNIFFTCCIRHNMLHTFDGLDLFEENTDWTGSAGHHD 338          
BLAST of mRNA_P-littoralis_Contig1270.3.1 vs. uniprot
Match: A0A6H5KEB6_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEB6_9PHAE)

HSP 1 Score: 348 bits (892), Expect = 1.470e-112
Identity = 181/319 (56.74%), Postives = 205/319 (64.26%), Query Frame = 1
Query:  208 HKFCKNFAKEMFEEHIYLPTGTYQDEVMDCYRKLGFTGAIGSTDVTHVGWGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGRAIGVTQGFTGATNDKTIVRYDAAVQTIRNNKVYKDREYKLRKADGTEFTRKGCYLIVDNG----------YHE---------------WVTLMAPSKYPGDVDDAAFSKMLESVRKDVECFFGILKGRFRILKLRLAYH-------------------------------------C--------------------REDIDNIFFTCCILHNMLHSFDGMSVFKENVDWAGSAGLHD 918
            HKFC++FA EMF+EHIYL TGTY DEVM  + +LG TGA GST+VTH+GW MCPFTLGRSFTGKEGFPT+A EVTVDHAGRA+ VT GFTGATNDKTI+RYD+ V  IR    Y +REYKLRKA+GTE TR+GC+LIVDNG          +H+               WVTL+APSKYP   +D AFS+ LESVRKDVECFFGILKGRFRILKLR+ YH                                     C                    RE IDNIFFTCCILHNMLH+FDG+ VF+EN DW GSAG HD
Sbjct:  246 HKFCRHFAAEMFDEHIYLLTGTYLDEVMGIFHQLGCTGACGSTNVTHIGWNMCPFTLGRSFTGKEGFPTIACEVTVDHAGRALAVTNGFTGATNDKTIIRYDSGVNKIRTESQYTEREYKLRKANGTERTRRGCFLIVDNGMSVPKDLCVVHHKNIVAKLPSSERVLIWWVTLIAPSKYPQSNEDTAFSRHLESVRKDVECFFGILKGRFRILKLRMPYHKREYIDNIFFTCCILHNMLHTGGXFSRHLESVRKDVECFFGILKGRFRILKLRMPYHKREYIDNIFFTCCILHNMLHTFDGLDVFEENTDWTGSAGHHD 564          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1270.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JAU4_9PHAE1.020e-14663.07Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K796_9PHAE1.960e-13971.59Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JPH7_9PHAE1.170e-13660.13Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KSI7_9PHAE2.560e-13567.37DDE Tnp4 domain-containing protein (Fragment) n=1 ... [more]
A0A6H5JHI0_9PHAE6.530e-13160.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JBE2_9PHAE1.950e-12558.77Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KNX4_9PHAE2.100e-12355.09DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5KY50_9PHAE1.970e-12160.95Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K872_9PHAE9.220e-12060.48DDE Tnp4 domain-containing protein (Fragment) n=1 ... [more]
A0A6H5KEB6_9PHAE1.470e-11256.74DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1270contigP-littoralis_Contig1270:20746..23080 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7FSK2
PFAMsPlant_tran
Model size918
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons3
Evalue1.27e-99
EggNOG OGs2E2RF@1|root,2S9YA@2759|Eukaryota
DescriptionPlant transposon protein
Cds size918
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789565.3839812-CDS-P-littoralis_Contig1270:20745..210241680789565.3839812-CDS-P-littoralis_Contig1270:20745..21024Pylaiella littoralis U1_48CDSP-littoralis_Contig1270 20746..21024 -
1680789565.3962774-CDS-P-littoralis_Contig1270:21595..221231680789565.3962774-CDS-P-littoralis_Contig1270:21595..22123Pylaiella littoralis U1_48CDSP-littoralis_Contig1270 21596..22123 -
1680789565.4082265-CDS-P-littoralis_Contig1270:22969..230801680789565.4082265-CDS-P-littoralis_Contig1270:22969..23080Pylaiella littoralis U1_48CDSP-littoralis_Contig1270 22970..23080 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1270.3.1prot_P-littoralis_Contig1270.3.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig1270 20746..23080 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig1270.3.1

>prot_P-littoralis_Contig1270.3.1 ID=prot_P-littoralis_Contig1270.3.1|Name=mRNA_P-littoralis_Contig1270.3.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=306bp
IPRAFFLRLVELSKEKNWFSDGGADAAGREGIPVELKILTALQILGRGNC
FDDINQLSLMSKSMAAATFHKFCKNFAKEMFEEHIYLPTGTYQDEVMDCY
RKLGFTGAIGSTDVTHVGWGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGR
AIGVTQGFTGATNDKTIVRYDAAVQTIRNNKVYKDREYKLRKADGTEFTR
KGCYLIVDNGYHEWVTLMAPSKYPGDVDDAAFSKMLESVRKDVECFFGIL
KGRFRILKLRLAYHCREDIDNIFFTCCILHNMLHSFDGMSVFKENVDWAG
SAGLHD
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mRNA from alignment at P-littoralis_Contig1270:20746..23080-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig1270.3.1 ID=mRNA_P-littoralis_Contig1270.3.1|Name=mRNA_P-littoralis_Contig1270.3.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=2335bp|location=Sequence derived from alignment at P-littoralis_Contig1270:20746..23080- (Pylaiella littoralis U1_48)
ATTCCGAGAGCCTTCTTCCTGAGGTTGGTGGAGCTGTCGAAGGAGAAGAA TTGGTTCTCAGACGGAGGAGCGGATGCAGCAGGCCGTGAGGGTATCCCAG TAGAGCTCAAGGTGCGCTTGAAAACGACACTTCGTACGCAGCATAACATA CTGGAAAATAATATAGATGGTATGTGTACAAGTACAAAATACAGCAGCTT TCCACTGCTGTACGTCACACAACTGCTGTCCACACACCGCCGTCAACCTC ATGACTGCAGCACAACTGCTGCACCTGATGAAAGTCTGCATGCCTTTCGG GGCCGGTATATTTGTGAAGCACTTGCAGCTGTAGGGTATGCGAGACCAAT CAAGTGCGCAACGATTTTTGTGGGTCGGCACGACGAGGACTAGCGAATGA ACTTATTCTGGATAACAAAGTGCCGCAGACGGATATCACCACAGCAGTGT GTGTTGCTGATGCTGCCGAAGATACCGCTGCAGGTTTTTGGGTACTCTTC TGTGCCCCACTCCTGGGTCGGTGGTTATTACGAGGTACTTATATTCCGAA CCTTTCTTGATTGGTCGTTTCGGGTCGAGTGGGTGCGGAAACACGGGAAT GCAACCATACATGACTGCTGTACTGCTGTAGACTGGCGTGCAGAATAGAT GGGATGGCAACACAACACAACAGTATTTATCACGCTTTCACGTAAAATAA AACATGCCGTTGCTGCGCCACCACGTGACGCTATTCCGACACAACAGCTG TCACGATGTGTGTATGTGAAAGTCAAAACATCATCCGTAATACGAAATCA TGTATCTGCCTGATTCGTATACACGGACTACTTAAAATGGTAGTTGTCCA GCCGAGCGAATCGGGCAACAGCAACTACTTGACTGATGGACACTCCCGCC CCCCCCTTTTCTCCCCGCCGCCGCGCGCGCTCCCCTCCCCCTGACATTAT TCGACAGATCTTGACGGCCCTCCAGATACTCGGCAGGGGCAACTGCTTCG ACGACATCAACCAGCTGTCGTTAATGAGCAAATCGATGGCGGCAGCAACG TTCCACAAGTTCTGCAAGAACTTCGCGAAGGAGATGTTCGAGGAGCATAT CTACCTTCCAACAGGAACGTACCAAGACGAAGTGATGGACTGCTACCGCA AACTGGGTTTTACTGGAGCAATCGGTTCTACCGACGTCACTCACGTCGGT TGGGGCATGTGTCCGTTCACCCTTGGCCGTTCTTTCACGGGCAAGGAGGG GTTTCCAACCCTGGCGTTCGAGGTTACCGTCGACCACGCGGGCCGCGCCA TTGGCGTCACCCAAGGGTTCACCGGTGCGACCAACGACAAGACGATCGTC CGCTACGACGCAGCCGTACAGACCATCAGGAACAACAAAGTGTACAAGGA TCGAGAGTACAAGCTCAGGAAGGCGGATGGCACGGAGTTCACCCGGAAAG GATGCTATTTGATCGTCGACAACGGCTATCACGAGGTGAGTGTATTGGGG GCGTGGGGAGTATTAGAATATCCGAACGTAGTGCGTGCTCCGTGACGCTT CGGGTTGATGTGAAGCCCGAAAAATACACGCCGGTACACCGAAAGCAGAC CAATGCCATATTTGTCGGTACTGGATGAGGATCTTTATGGCATGTCGGCC CCGTGCATCGGGCGTCGACCTTACGCAGCGGCACACCAAGGTGAAAAACG TTTTGCCGCTTCGCGTTCCTTCTATTTGTAGTTGTTTTCGTGCTGGTTCC GTTTGGACGGTTGCGTTCACTTTTTTACATTTCGAGCATACATCACCCCA TTTATAACACCAAAGGTTTTAACAAACAAATCTGCTCAGGGGTGGTCAGA TGGCAAATATTGTACTTCGAAGTACAAAGTTGTAGGCATCTGTGTTGCCC ACATGTCGACACGGTTCCTCGTTCCCCCCGAGGAGTTTGATCGTGAAAAT ATGTGCGTCGGGGCCTGAGGTTTCCAGAGCCTTTCCGTAGCTCACCAGTC GTCCCTTTCGACCCCCCCCCCTGCTACTGTTGTGCCGTCGTGTGCCAAAT CAACAGTGGGTCACCCTCATGGCCCCATCGAAGTACCCGGGTGACGTGGA TGACGCGGCCTTCTCCAAGATGCTTGAGAGTGTGCGCAAGGATGTGGAGT GTTTCTTCGGCATTCTGAAAGGGCGCTTCAGAATCCTGAAGCTCCGCCTG GCCTACCACTGCAGGGAAGACATCGATAACATCTTCTTCACGTGCTGCAT TCTCCACAACATGCTCCACTCCTTCGACGGCATGAGCGTGTTCAAGGAGA ACGTCGACTGGGCAGGCAGCGCTGGTCTGCACGAC
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Coding sequence (CDS) from alignment at P-littoralis_Contig1270:20746..23080-

>mRNA_P-littoralis_Contig1270.3.1 ID=mRNA_P-littoralis_Contig1270.3.1|Name=mRNA_P-littoralis_Contig1270.3.1|organism=Pylaiella littoralis U1_48|type=CDS|length=918bp|location=Sequence derived from alignment at P-littoralis_Contig1270:20746..23080- (Pylaiella littoralis U1_48)
ATTCCGAGAGCCTTCTTCCTGAGGTTGGTGGAGCTGTCGAAGGAGAAGAA
TTGGTTCTCAGACGGAGGAGCGGATGCAGCAGGCCGTGAGGGTATCCCAG
TAGAGCTCAAGATCTTGACGGCCCTCCAGATACTCGGCAGGGGCAACTGC
TTCGACGACATCAACCAGCTGTCGTTAATGAGCAAATCGATGGCGGCAGC
AACGTTCCACAAGTTCTGCAAGAACTTCGCGAAGGAGATGTTCGAGGAGC
ATATCTACCTTCCAACAGGAACGTACCAAGACGAAGTGATGGACTGCTAC
CGCAAACTGGGTTTTACTGGAGCAATCGGTTCTACCGACGTCACTCACGT
CGGTTGGGGCATGTGTCCGTTCACCCTTGGCCGTTCTTTCACGGGCAAGG
AGGGGTTTCCAACCCTGGCGTTCGAGGTTACCGTCGACCACGCGGGCCGC
GCCATTGGCGTCACCCAAGGGTTCACCGGTGCGACCAACGACAAGACGAT
CGTCCGCTACGACGCAGCCGTACAGACCATCAGGAACAACAAAGTGTACA
AGGATCGAGAGTACAAGCTCAGGAAGGCGGATGGCACGGAGTTCACCCGG
AAAGGATGCTATTTGATCGTCGACAACGGCTATCACGAGTGGGTCACCCT
CATGGCCCCATCGAAGTACCCGGGTGACGTGGATGACGCGGCCTTCTCCA
AGATGCTTGAGAGTGTGCGCAAGGATGTGGAGTGTTTCTTCGGCATTCTG
AAAGGGCGCTTCAGAATCCTGAAGCTCCGCCTGGCCTACCACTGCAGGGA
AGACATCGATAACATCTTCTTCACGTGCTGCATTCTCCACAACATGCTCC
ACTCCTTCGACGGCATGAGCGTGTTCAAGGAGAACGTCGACTGGGCAGGC
AGCGCTGGTCTGCACGAC
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