prot_P-littoralis_Contig1270.1.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig1270.1.1
Unique Nameprot_P-littoralis_Contig1270.1.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length169
Homology
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BLAST of mRNA_P-littoralis_Contig1270.1.1 vs. uniprot
Match: A0A6H5J557_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J557_9PHAE)

HSP 1 Score: 64.7 bits (156), Expect = 4.460e-9
Identity = 57/167 (34.13%), Postives = 87/167 (52.10%), Query Frame = 0 
Query:    6 SGDAQRARDVAK-FGDRPDDWINPFSLAFVLFGRPAGEQEDVDLKCKVSGGGKTGAAATAAVEPGGAGVGSAAKAHG------LGRHDLANLDGAGGGAGGQQSRAAVKKERHVANSEAKRAEESKATAKFRAEALKAMTAPVESSESSKRLALSVETLTRTAVLRQ 165
            +GDA+   D+ + +G +P+ W++P SL F +FGRPAG  EDVDLK K++ G  +G                            L    L  ++    GAGG+ SRA +K   H  N+E K+ + ++A A  +  AL+A++ P E S+SS  L  SV+ LTR  V ++
Sbjct:  270 AGDAETEDDLTRLYGPKPEHWLHPASLVFAIFGRPAGTNEDVDLKLKMTSGRPSGTKXXXXXXXXXXXXXXXXXXXEDESKPCLSTKGLKLMN----GAGGKHSRAEMKTLAHEVNAENKKLKGAEADAVLKRRALEALSTPPEDSKSSLELVESVKALTRAVVSKE 432
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1270.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5J557_9PHAE4.460e-934.13Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 103..123
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 87..124
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 104..124

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1270contigP-littoralis_Contig1270:17308..17814 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1270.1.1mRNA_P-littoralis_Contig1270.1.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig1270 17308..17815 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig1270.1.1 ID=prot_P-littoralis_Contig1270.1.1|Name=mRNA_P-littoralis_Contig1270.1.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=169bp
DQDGASGDAQRARDVAKFGDRPDDWINPFSLAFVLFGRPAGEQEDVDLKC
KVSGGGKTGAAATAAVEPGGAGVGSAAKAHGLGRHDLANLDGAGGGAGGQ
QSRAAVKKERHVANSEAKRAEESKATAKFRAEALKAMTAPVESSESSKRL
ALSVETLTRTAVLRQRLAE
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