prot_P-littoralis_Contig127.96.3 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig127.96.3
Unique Nameprot_P-littoralis_Contig127.96.3
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length1338
Homology
BLAST of mRNA_P-littoralis_Contig127.96.3 vs. uniprot
Match: D7FXV0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXV0_ECTSI)

HSP 1 Score: 544 bits (1401), Expect = 2.430e-172
Identity = 375/807 (46.47%), Postives = 419/807 (51.92%), Query Frame = 0
Query:  526 RTGGLRCRGVGVGEGGKDTFRRQALSTVLANGLRTQRLRLGRTSNSRTGAGVARGHPESQGVQGRVAGGVSCMEFDYMGWQLAVGGENVTVYDFDRYLPENAKLKHTLVSGVRAYLQPTDGIQTRRTVSCIRWNPANGEQLAVSYLNYDEIEVYDLMSIVPGNVITPVLTLLPSAGSAAVAVAPASRSDGGGAFGRVRVDGXXXXXXXXXSSARVGGASSLSGKFRGLGHLTLEFVRRGPPGKKIMHLVAGGRGGVFRVWRFFPEKAKRLAPYLQGQVGSSHRRG-LSRADVTAVCCLNPDTVIVGTDSGQLVAYSLNLPVVKNFRSSKNADQKKAWYLGASSVW-----GDAAAAPCVGANCSVQFLRLSPEHGTGVVLCGLRGGRVVIFDTNAGRALGISEPHRGVSIGFCAPPAAAFVPAAPAAAVVASDEEAGRPAPLTEGEGGTGPYSGGHWGPVMLACCKSSEGGEVELVVLSTSARAELDSCKRRG-------NRKTTRLARRSGLRPGRGWELGEAGGGGFRIEESGGYDLCLPIEVVAATPGQNRVRLSADARGYLCPRAEGRLLRSGLVTSSIMIGEEKHSVEAVSADGTVLVLDRGYRGPAVVTPPGREDGGAGVSSSNGGNQEPVVDFADGSELDEPDGTGRDAAAAAXXXXXXXXXXXXGTGSALRQVGAIAHRRNTAXXXXXXXXXXXXXXXXXXXXXXXPEEKSWDRAWRPGGVRVFAKLKAVFGGGQQNDSFFDAVRSEAEAEAAPPFTLYQVVARAGLDLPVTAITPHPRMNFVLVGLADGTVAAVLPQG 1319
            RTGGLRCRGVGVG+ G+DTFRRQALSTVL +GLRTQRLR+G  SNS TG+GV RGHP SQG+QGR+AGGVSCMEFD +GWQLAVGGENVTVYDFDRYLPEN ++K TL SGVRAYLQPTDGIQT+RTVSC+RWNPANG+Q                                                                                                                                       GQV +SHR G  SRA VTAVCCL PD V+VGTDSGQL  YSLNLPVVKNFRSSK+ADQK+AW L AS+VW     G A+ A   GAN  VQFLRLSPEHG GVV+CGLR GRVV+FDT AGRALG++EPHRG SIG+C  PAAA              E     APL EGEG + PY GGHWGPV+LACCK                                  +R T R  R+SGLRPGRGWE+G AGGGGF +EES GYDLCLP+ VV A PG+ R  +  D RG                       +E+ +                             D G G         E     + G  LDE                           +               XXXXXXXXXXXXXXXXXXXX     E  WDRAWRP GVRVFAKL+AVFG  +          SEA A+  PPF LYQVVARA LD+PVTAIT HPRMNFVLVGL+DGTVAAVLP+G
Sbjct:  276 RTGGLRCRGVGVGDAGRDTFRRQALSTVLGSGLRTQRLRMGCVSNSGTGSGVVRGHPASQGLQGRIAGGVSCMEFDSVGWQLAVGGENVTVYDFDRYLPENQQVKRTLESGVRAYLQPTDGIQTKRTVSCVRWNPANGDQ---------------------------------------------------------------------------------------------------------------------------------------GQVTASHRGGGASRAAVTAVCCLTPDVVLVGTDSGQLATYSLNLPVVKNFRSSKSADQKRAWSLAASTVWNKASGGAASGAVSGGANLYVQFLRLSPEHGAGVVMCGLRSGRVVVFDTGAGRALGVTEPHRGASIGYCPAPAAAXXXXXXXXXEGGGAEPIEGVAPLAEGEGASDPYGGGHWGPVVLACCKEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDRGTKRPRRKSGLRPGRGWEIGAAGGGGFLLEESEGYDLCLPVGVVEANPGRRRGTVE-DHRG----------------------SDERETCG---------------------------DAGRGT--------ERTTAHSGGDALDET--------------------------ATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEERREPRWDRAWRPNGVRVFAKLRAVFGDKRHE--------SEAAAQPPPPFALYQVVARAKLDMPVTAITSHPRMNFVLVGLSDGTVAAVLPRG 855          
BLAST of mRNA_P-littoralis_Contig127.96.3 vs. uniprot
Match: A0A6H5JZC0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZC0_9PHAE)

HSP 1 Score: 542 bits (1396), Expect = 4.370e-168
Identity = 443/1107 (40.02%), Postives = 490/1107 (44.26%), Query Frame = 0
Query:  507 PWPCRRRRGAASLFLSQRQRTGGLRCRGVGVGEGGKDTFRRQALSTVLANGLRTQRLRLGRTSNSRTGAGVARGHPESQGVQGRVAGGVSCMEFDYMGWQLAVGGENVTVYDFDRYLPENAKLK-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------HTLVSGVRAYLQPTDGIQTRRTVSCIRWNPANGEQLAVSYLNYDEIEVYDLMSIVPGNVITPVLTLLPSAGSAAVAVAPASRSDGGGAFGRVRVDGXXXXXXXXXSSARVGGASSLSGKFRGLGHLTLEFVRRGPPGKKIMHLVAGGRGGVFRVWRFFPEKAKRLAPYLQGQVGSSHRRGLSRADVTAVCCLNPDTVIVGTDSGQLVAYSLNLPVVKNFRSSKNADQKKAWYLGASSVW-----GDAAAAPCVGANCSVQFLRLSPEHGTGVVLCGLRGGRVVIFDTNAGRALGISEPHRGVSIGFCAPPAAAFVPAAPAAAVVASDEEAGR---PAPLTEGEGGTGPYSGGHWGPVMLACCKSSEGGEVELVVLSTSARAELDSCKRRGNRKTTRLARRSGLRPGRGWELGEAGGGGFRIEESGGYDLCLPIEVVAATPGQNRVRLSADARGYLCPRAEGRLLRSGLVTSSIMIGEEKHSVEAVSADGTVLVLDRGYRGPAVVTPPGREDGGAGVSSS------NGGN--------------QEPVVDFADGSELDEPDG-TGRDAAAAAXXXXXXXXXXXXGTGSALRQVGAIAHRRNTAXXXXXXXXXXXXXXXXXXXXXXXPE------EKSWDRAWRPGGVRVFAKLKAVFGGGQQNDSFFDAVRSEAEAEAAPPFTLYQVVARAGLDLPVTAITPHPRMNFVLVGLADGTVAAVLPQG 1319
            PWPCRRRRGA SLFLS+RQRTGGLRCRGVGVG+ G+DTFRRQALSTVL +GLRTQRLR+G  SNS TG+GV RGHP SQG+QGR+AGGVSCMEFD +GWQLAVGGENVTVYDFDRYLPE                                                                                                                                                                                                                                                                                                                                                                        XXXXXXXXX                                                                          G SRA VTAVCCL+PD V+VGTDSGQLV YSLNLPVVKNFRSSK+ADQK+AW L AS+VW     G A++    GAN  VQFLRLSPEHG GVVLCGLR GRVV+FDT AGR LG+++PHRG SIGFC  PAAA VPA+ A A    D  AG     APLTEGEG + PY GGHWGPV+LACCK ++GG  ELVVLST A+               R  R SGLRPGRGWE+G AGGGGFR+EESGGYDLCLP+ VV ATPG+ RVRLSAD RGYLCPR EGRLLRSGLVTSSI IG E+HSVEA++ DGTVLVLDR YRGPAV T PG  D     ++S      NG                Q  V D   GS+  EP G  GR+A                     +   G   H   T+XXXXXXXXXXXXXXXXXXXXXXXP+      E  WDRAWRP GVRVFAKL+AVFG  +          S A A+  PPF LYQVVARA LD+PVTA+T HPRMNFVLVGL+DGTVAAVLP+G
Sbjct:   89 PWPCRRRRGAPSLFLSRRQRTGGLRCRGVGVGDAGRDTFRRQALSTVLGSGLRTQRLRMGCVSNSGTGSGVVRGHPASQGLQGRIAGGVSCMEFDSVGWQLAVGGENVTVYDFDRYLPEGEMTSLRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRGGGASRAAVTAVCCLSPDVVLVGTDSGQLVTYSLNLPVVKNFRSSKSADQKRAWSLAASTVWNKASGGAASSTVSGGANFYVQFLRLSPEHGAGVVLCGLRSGRVVVFDTEAGRVLGVTKPHRGASIGFCPAPAAAPVPASSAPAP--EDGGAGPIEGVAPLTEGEGASDPYGGGHWGPVVLACCKEADGGGEELVVLSTGAK---------------RPTRISGLRPGRGWEIGAAGGGGFRLEESGGYDLCLPVGVVEATPGRRRVRLSADVRGYLCPRDEGRLLRSGLVTSSIKIGAERHSVEAITGDGTVLVLDRKYRGPAVATEPGPGDAARMTAASASLPRHNGAXXXXXXXXXXXXXXXQGAVKDH-HGSDEREPGGDAGREAERTT-----------------VHSEGDALHETATSXXXXXXXXXXXXXXXXXXXXXXXPQPREELREPPWDRAWRPNGVRVFAKLRAVFGDERHE--------SGAAAQPPPPFALYQVVARAKLDMPVTAMTSHPRMNFVLVGLSDGTVAAVLPRG 1152          
BLAST of mRNA_P-littoralis_Contig127.96.3 vs. uniprot
Match: A0A225WNJ7_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WNJ7_9STRA)

HSP 1 Score: 63.5 bits (153), Expect = 1.990e-6
Identity = 37/88 (42.05%), Postives = 48/88 (54.55%), Query Frame = 0
Query:  596 SCMEFDYMGWQLAVGGEN--VTVYDFDRYLPENAKLKHTLVSGVRAYLQPTDGIQTRRTVSCIRWNPANGEQLAVSYLNYDEIEVYDL 681
            SC+EFD  G  LA G  N  V +YDFD     +  L H         L P   I T   V+CIRWNP N +++A S++N +EI V+DL
Sbjct:  132 SCLEFDRPGVLLAAGASNGIVALYDFDDVFHRSLNLGHKQDE----VLHPIHTIFTPFEVACIRWNPLNEDEIACSFMNRNEIYVFDL 215          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig127.96.3 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FXV0_ECTSI2.430e-17246.47Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JZC0_9PHAE4.370e-16840.02Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A225WNJ7_9STRA1.990e-642.05Uncharacterized protein n=1 Tax=Phytophthora megak... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 593..925
e-value: 1.7E-6
score: 29.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 452..492
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 41..79
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 303..351
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 286..413
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 718..738
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 370..387
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..26
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1124..1167
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 58..79
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 593..940

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig127contigP-littoralis_Contig127:453263..459217 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig127.96.3mRNA_P-littoralis_Contig127.96.3Pylaiella littoralis U1_48mRNAP-littoralis_Contig127 453102..459861 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig127.96.3 ID=prot_P-littoralis_Contig127.96.3|Name=mRNA_P-littoralis_Contig127.96.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=1338bp
MERFLSSNPARASNAGAPAAAVQADRKNRLVASTATAAAAGAGGGAAAAA
GRQPAARKYKPTDLEKLRGEERNDRKAVGLSPALKEQLLARPASKKLRLG
NISERHRAQQLQRQGSDENIALIASPRSAALRRQTSLERIKAKRPLAVAA
AAAAQTTGWYEMPGPSQKTVPVVDRQTATNGNKSRAPWARAKAVKEARGR
GVPPPPLPTAAAAAAVGSQLTLTNAAQKAAAAAASKAETTPPQTDLFPRR
VAAQRPAAKAFGLVQSRVGRMDEFFPRRVPSRPVSVTSRLGHPVIPPVAR
RRRSIPRFRDSNSPESDDDSEGDGSARRDGEAYHFRWRTDGDEERAGGEG
GDVQHFDGGSARGNSTDAHHAGASIVSVNSGHEQAAARTASEPTGLGSAK
GSPPASAEVAGPTARSEIAARAALAAEKRAAASAMSATAVVAVLPGTVSP
EEATAWGEELEEADQASNDTRAAGAAGAVEGTEDPALADAAEAEYDVADE
ALAAPSPWPCRRRRGAASLFLSQRQRTGGLRCRGVGVGEGGKDTFRRQAL
STVLANGLRTQRLRLGRTSNSRTGAGVARGHPESQGVQGRVAGGVSCMEF
DYMGWQLAVGGENVTVYDFDRYLPENAKLKHTLVSGVRAYLQPTDGIQTR
RTVSCIRWNPANGEQLAVSYLNYDEIEVYDLMSIVPGNVITPVLTLLPSA
GSAAVAVAPASRSDGGGAFGRVRVDGGGGGSGGGGSSARVGGASSLSGKF
RGLGHLTLEFVRRGPPGKKIMHLVAGGRGGVFRVWRFFPEKAKRLAPYLQ
GQVGSSHRRGLSRADVTAVCCLNPDTVIVGTDSGQLVAYSLNLPVVKNFR
SSKNADQKKAWYLGASSVWGDAAAAPCVGANCSVQFLRLSPEHGTGVVLC
GLRGGRVVIFDTNAGRALGISEPHRGVSIGFCAPPAAAFVPAAPAAAVVA
SDEEAGRPAPLTEGEGGTGPYSGGHWGPVMLACCKSSEGGEVELVVLSTS
ARAELDSCKRRGNRKTTRLARRSGLRPGRGWELGEAGGGGFRIEESGGYD
LCLPIEVVAATPGQNRVRLSADARGYLCPRAEGRLLRSGLVTSSIMIGEE
KHSVEAVSADGTVLVLDRGYRGPAVVTPPGREDGGAGVSSSNGGNQEPVV
DFADGSELDEPDGTGRDAAAAAAEGAARRRAAATGTGSALRQVGAIAHRR
NTATVAAAAAESITAAAAAPEQPPQQPEEKSWDRAWRPGGVRVFAKLKAV
FGGGQQNDSFFDAVRSEAEAEAAPPFTLYQVVARAGLDLPVTAITPHPRM
NFVLVGLADGTVAAVLPQGKRETRIPRGRDASQSGLM*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR036322WD40_repeat_dom_sf