mRNA_P-littoralis_Contig127.67.2 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig127.67.2
Unique NamemRNA_P-littoralis_Contig127.67.2
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig127.67.2 vs. uniprot
Match: D7FMQ8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMQ8_ECTSI)

HSP 1 Score: 496 bits (1276), Expect = 6.330e-170
Identity = 262/337 (77.74%), Postives = 272/337 (80.71%), Query Frame = 3
Query:   75 MVQTLG-SLAGARDPHQXXXXXSVRFSRGRALKLAFSWG----------------------------RSIEGMQKSAKKPWGKFLDAGTGTHSLKWINTLDTEGFTAVTADPQFADTTRKEIGFNVKAPDEIVVGNWRDEQFLEGRVFDTVLADYLVGAIDGFAPYYQDQVFERLKRHVAPGGSIYLVGMQPLPDHPGGAAELVCEAARLRDSCILLAGHRPYREYPLDWITRQMRKSGMVVTSAKKMPVLYAPHTVKRQLDVASRKLPIIAVTDPKLAAALEKHISALDGRVRKELAGAGGRVEVGFDYVVAAELAPEP----EERCAVSAEEKGG 986
            MVQ    S+AG R P Q           GRA KLAF W                             RSIEGMQK+A KPWGKFLDAGTGTHSLKWINTL+TEGFTAVTADPQFA+ TRKEIGF VK PDEIVVGNWRDE+FLEGRVFDTVLADYLVGAIDGFAPYYQDQVFERLKRHVAPGG IYLVGMQPLPDHPGGAAELVCEAARLRDSCILLAGHRPYREYPLDWITRQM+KSGMVVTSAKKMPVLYAPHTVKRQLDVASRKLPIIA TDPKLAAALE+HIS LDGRVRKELAGAGGRVEVGFDYVVAAELA EP    E + AV+ E +GG
Sbjct:    1 MVQAFELSVAGCRVPQQQQQQQHFTSRFGRAAKLAFFWSFGFGGFPQQKIRAAFPRLGMAATEDALFRSIEGMQKAANKPWGKFLDAGTGTHSLKWINTLNTEGFTAVTADPQFAENTRKEIGFKVKTPDEIVVGNWRDEKFLEGRVFDTVLADYLVGAIDGFAPYYQDQVFERLKRHVAPGGRIYLVGMQPLPDHPGGAAELVCEAARLRDSCILLAGHRPYREYPLDWITRQMKKSGMVVTSAKKMPVLYAPHTVKRQLDVASRKLPIIAATDPKLAAALERHISDLDGRVRKELAGAGGRVEVGFDYVVAAELAREPAAGAERKEAVTPEGEGG 337          
BLAST of mRNA_P-littoralis_Contig127.67.2 vs. uniprot
Match: A0A835Z2H5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2H5_9STRA)

HSP 1 Score: 307 bits (786), Expect = 4.190e-97
Identity = 145/269 (53.90%), Postives = 203/269 (75.46%), Query Frame = 3
Query:  189 RSIEGMQKSAKKPWGKFLDAGTGTHSLKWINTLDTEGFTAVTADPQFADTTRKEIGFNVKAPDE------IVVGNWRDEQFLEGRVFDTVLADYLVGAIDGFAPYYQDQVFERLKRHVAPGGSIYLVGMQPLPDHPGGAAELVCEAARLRDSCILLAGHRPYREYPLDWITRQMRKSGMVVTSAKKMPVLYAPHTVKRQLDVASRKLPIIAVTDPKLAAALEKHISALDGRVRKELAGA-GGRVEVGFDYVVAAELAPEPEERCAVSAE 974
            +++ G+Q ++ KPWG+FLD+GTGTHSL+W++TL T G+TAVTAD QFA   + E+        +      I+VGNW+DE F EG ++DT+LADYL+GAIDGF+PYYQD++F+RLKRH+APGG+++++GMQP+PD     A +V E ARLRD+CILLAGHRPYRE+PLDW+ R ++K+G  VT +++MP+L++  +++RQLDVASRKLP     D  LAAA+E+HI+A+  R+    +   GGR+++GFDYVVAAE  P P    A S+E
Sbjct:    8 KAVTGLQTASGKPWGRFLDSGTGTHSLRWVHTLPTAGWTAVTADAQFAANMQAELQLTDAERAQASTAACIIVGNWQDESFQEGEIYDTILADYLIGAIDGFSPYYQDEIFDRLKRHLAPGGTLFIIGMQPVPDSAPHPANIVTEVARLRDACILLAGHRPYREFPLDWVERHLKKAGFAVTLSRRMPILHSEGSIRRQLDVASRKLPYFE--DRDLAAAMERHIAAVGARIVSTCSCVRGGRIQLGFDYVVAAEPLPRPPGAAAASSE 274          
BLAST of mRNA_P-littoralis_Contig127.67.2 vs. uniprot
Match: A0A7R9U2U4_9STRA (Hypothetical protein (Fragment) n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U2U4_9STRA)

HSP 1 Score: 253 bits (645), Expect = 3.250e-75
Identity = 126/254 (49.61%), Postives = 171/254 (67.32%), Query Frame = 3
Query:  192 SIEGMQKSAKKPWGKFLDAGTGTHSLKWINTLDTEGFTAVTADPQFADTTRKEIGFNVKAPDEIVVGNWRDEQFLEGRVFDTVLADYLVGAIDGFAPYYQDQVFERLKRHVAPGGSIYLVGMQPLPDHPGGAAELVCEAARLRDSCILLAGHRPYREYPLDWITRQMRKSGMVVTSAKKMPVLYAPHTVKRQLDVASRKLPII-----AVTDPKLAAALEKHISALD-----GRVRKELAGAGGRVEVGFDYVV 923
            SIE MQ    +PWG+FLDAGTG HSL WI+T++TE +TAVTA  + A  +R  +   ++  D +VVGNW D+ FLEG  FD +LADYL+GA+DGF+PY QD +FERL+RH+A  G +Y+VG++P+PD   GAA+++CE  R+RD+ ILLAGHR YREYP++WI RQ R+SG  V  + K P+LY+  ++ RQLDV  RKLP+I     A T   L+ A +     +D      +V      A  R+  GFDYV+
Sbjct:   73 SIERMQARIGRPWGRFLDAGTGRHSLHWISTIETEAWTAVTAAQEMAVQSRDSVRGAMREQDRVVVGNWDDDTFLEGETFDVILADYLIGAMDGFSPYKQDLIFERLQRHLAEDGILYIVGLEPIPDSGAGAADVICEVRRMRDAMILLAGHRCYREYPIEWIYRQCRRSGFEVMESLKFPILYSRASITRQLDVGRRKLPLIRSRHGAATALALSQACDALQHRIDDATNFSKVSPSGVTADTRIRFGFDYVM 326          
BLAST of mRNA_P-littoralis_Contig127.67.2 vs. uniprot
Match: A0A7S1UJN4_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UJN4_9STRA)

HSP 1 Score: 252 bits (643), Expect = 7.910e-75
Identity = 127/255 (49.80%), Postives = 170/255 (66.67%), Query Frame = 3
Query:  195 IEGMQKSAKKPWGKFLDAGTGTHSLKWI-NTLDTEGFTAVTADPQFADTTRKEIGFNVKAPDEIVVGNWRDEQFLEGRVFDTVLADYLVGAIDGFAPYYQDQVFERLKRHVAPGGSIYLVGMQPLPDHPGGAAELVCEAARLRDSCILLAGHRPYREYPLDWITRQMRKSGMVVTSAKKMPVLYAPHTVKRQLDVASRKLPII-AVTDPKLAAALEKHISALDGRV---------RKELAGAGGRVEVGFDYVVA 926
            IE MQ   ++PWG+FLDAGTG+HSL+WI    DT+ +TAVTA  + A  +R  +  +++  D++V+GNW DE FLEG V+D +LADYL+GA+DGF+PY QD +FERLKRH+AP G IY+VG++P+PD   GAA+++CE  RLRD+ ILLAGHR YREYPL WI RQ R++G  V  +   P+LY+  ++ RQLDV  RKLP I A      A A+ +    L  R+         +        R+  GFDYVVA
Sbjct:   79 IERMQMQQQRPWGRFLDAGTGSHSLQWIARNFDTDSWTAVTAAEEMAKQSRDSVKGHMREQDKVVIGNWDDETFLEGEVYDVILADYLIGAMDGFSPYTQDLIFERLKRHLAPDGVIYIVGLEPIPDTAEGAADVICEVRRLRDAMILLAGHRCYREYPLTWIYRQCRRAGFEVLESTTFPILYSRASITRQLDVGRRKLPYIRAKHGSSTAIAMGQACEMLQRRIDDATNHNTSKTSAVKTDTRIRFGFDYVVA 333          
BLAST of mRNA_P-littoralis_Contig127.67.2 vs. uniprot
Match: A0A7S1Y0Y4_9STRA (Hypothetical protein n=6 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1Y0Y4_9STRA)

HSP 1 Score: 252 bits (643), Expect = 1.700e-74
Identity = 127/255 (49.80%), Postives = 170/255 (66.67%), Query Frame = 3
Query:  195 IEGMQKSAKKPWGKFLDAGTGTHSLKWI-NTLDTEGFTAVTADPQFADTTRKEIGFNVKAPDEIVVGNWRDEQFLEGRVFDTVLADYLVGAIDGFAPYYQDQVFERLKRHVAPGGSIYLVGMQPLPDHPGGAAELVCEAARLRDSCILLAGHRPYREYPLDWITRQMRKSGMVVTSAKKMPVLYAPHTVKRQLDVASRKLPII-AVTDPKLAAALEKHISALDGRV---------RKELAGAGGRVEVGFDYVVA 926
            IE MQ   ++PWG+FLDAGTG+HSL+WI    DT+ +TAVTA  + A  +R  +  +++  D++V+GNW DE FLEG V+D +LADYL+GA+DGF+PY QD +FERLKRH+AP G IY+VG++P+PD   GAA+++CE  RLRD+ ILLAGHR YREYPL WI RQ R++G  V  +   P+LY+  ++ RQLDV  RKLP I A      A A+ +    L  R+         +        R+  GFDYVVA
Sbjct:  105 IERMQMQQQRPWGRFLDAGTGSHSLQWIARNFDTDSWTAVTAAEEMAKQSRDSVKGHMREQDKVVIGNWDDETFLEGEVYDVILADYLIGAMDGFSPYTQDLIFERLKRHLAPDGVIYIVGLEPIPDTAEGAADVICEVRRLRDAMILLAGHRCYREYPLTWIYRQCRRAGFEVLESTTFPILYSRASITRQLDVGRRKLPYIRAKHGSSTAIAMGQACEMLQRRIDDATNHNTSKTSAVKTDTRIRFGFDYVVA 359          
BLAST of mRNA_P-littoralis_Contig127.67.2 vs. uniprot
Match: A0A7S1UJN8_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UJN8_9STRA)

HSP 1 Score: 247 bits (631), Expect = 1.950e-73
Identity = 124/248 (50.00%), Postives = 166/248 (66.94%), Query Frame = 3
Query:  216 AKKPWGKFLDAGTGTHSLKWI-NTLDTEGFTAVTADPQFADTTRKEIGFNVKAPDEIVVGNWRDEQFLEGRVFDTVLADYLVGAIDGFAPYYQDQVFERLKRHVAPGGSIYLVGMQPLPDHPGGAAELVCEAARLRDSCILLAGHRPYREYPLDWITRQMRKSGMVVTSAKKMPVLYAPHTVKRQLDVASRKLPII-AVTDPKLAAALEKHISALDGRV---------RKELAGAGGRVEVGFDYVVA 926
            A +PWG+FLDAGTG+HSL+WI    DT+ +TAVTA  + A  +R  +  +++  D++V+GNW DE FLEG V+D +LADYL+GA+DGF+PY QD +FERLKRH+AP G IY+VG++P+PD   GAA+++CE  RLRD+ ILLAGHR YREYPL WI RQ R++G  V  +   P+LY+  ++ RQLDV  RKLP I A      A A+ +    L  R+         +        R+  GFDYVVA
Sbjct:   57 AARPWGRFLDAGTGSHSLQWIARNFDTDSWTAVTAAEEMAKQSRDSVKGHMREQDKVVIGNWDDETFLEGEVYDVILADYLIGAMDGFSPYTQDLIFERLKRHLAPDGVIYIVGLEPIPDTAEGAADVICEVRRLRDAMILLAGHRCYREYPLTWIYRQCRRAGFEVLESTTFPILYSRASITRQLDVGRRKLPYIRAKHGSSTAIAMGQACEMLQRRIDDATNHNTSKTSAVKTDTRIRFGFDYVVA 304          
BLAST of mRNA_P-littoralis_Contig127.67.2 vs. uniprot
Match: A0A7S2XXT9_9STRA (Hypothetical protein n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XXT9_9STRA)

HSP 1 Score: 241 bits (615), Expect = 1.950e-71
Identity = 128/281 (45.55%), Postives = 181/281 (64.41%), Query Frame = 3
Query:  147 FSRGRALKLAFSWGRSIEGMQKSAKKPWGKFLDAGTGTHSLKWINT------LDT--------EGFTAVTADPQFADTTRKE--IGFNVKAPDEIVVGNWRDEQFLEGRVFDTVLADYLVGAIDGFAPYYQDQVFERLKRHVAPGGSIYLVGMQPLPDHPGGAAE-LVCEAARLRDSCILLAGHRPYREYPLDWITRQMRKSGMVVTSAKKMPVLYAPHTVKRQLDVASRKLPIIAVTDPKLAAALEKHISALDGRVRKELAGA-GGRVEVGFDYVVAAEL 935
            FS  R L   F+    I  MQ+   KPWGKFLDAGTG HS+KW+++      LD+        E +  VTA  + A   R++  +   ++  D +V+GNW D   L+G  FDTVLADYL+GA+DGF+PY QD +  RLK+H+APG  +Y++G++PLPD     AE +VCE  R+RD+CILLAGHR YRE+PL+W  R +  SG  V  +KK+P++Y+  ++KRQ+DVASRKLP     D  L + + +HI  L  RVR+ ++     RV +GFDY+++AE+
Sbjct:   11 FSARRTLPTPFA---EITRMQQECGKPWGKFLDAGTGLHSMKWVSSRGRSGGLDSNEDPVGGLESWCGVTASWEDAQKIRQDPQVSGVMQDSDSVVLGNWDDPDLLKGMTFDTVLADYLIGAMDGFSPYKQDLMLPRLKQHMAPGARLYIIGLEPLPDKSQNPAEDIVCEVRRVRDACILLAGHRCYREFPLEWTERHLTGSGFRVVESKKLPIMYSFQSIKRQIDVASRKLPFFK--DKALVSVMRQHIDQLTERVREAVSSTPNSRVRLGFDYIISAEV 286          
BLAST of mRNA_P-littoralis_Contig127.67.2 vs. uniprot
Match: A0A7S3GT58_9STRA (Hypothetical protein (Fragment) n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GT58_9STRA)

HSP 1 Score: 236 bits (603), Expect = 6.170e-70
Identity = 116/260 (44.62%), Postives = 162/260 (62.31%), Query Frame = 3
Query:  222 KPWGKFLDAGTGTHSLKWINTLDTEGFTAVTADPQFADTTRKEIGF--NVKAPDEIVVGNWRDEQFLEGR-VFDTVLADYLVGAIDGFAPYYQDQVFERLKRHVAPGGSIYLVGMQPLPDHPGGAAELVCEAARLRDSCILLAGHRPYREYPLDWITRQMRKSGMVVTSAKKMPVLYAPHTVKRQLDVASRKLPIIAVTDPKLAAALEKHISALDGRVRKELAGAGGRVEVGFDYVVAAELAPEPEERCAVSAEEKGGKE 992
            K WGK LDAGTG HS+KWI  L   G+TA+TAD    +   KE G    ++  D ++VGNW DE F EG   FDT+LADYL+GA+DGF+PY QD++  +LKRH+ P G +Y++GM P+PD P     ++ E  R RD+CILL GHRPYRE+PLDW+ R +  +   VT +K   +L++  +  RQ+ V   KL ++   D  L + +EK++  L+ R R+ +  AGGR+ + FDYV++AE         A  A   GG E
Sbjct:   21 KAWGKILDAGTGVHSIKWIQGLTNSGWTAITADTGMRNQMMKESGVAAQMRPQDSVIVGNWMDEAFCEGLGTFDTILADYLIGAVDGFSPYQQDEILVKLKRHLTPEGRLYIIGMNPIPDEPAPPGNIISEIRRARDACILLGGHRPYREFPLDWMRRHLTSAQFSVTGSKNFTILHSEDSAVRQIRVGQSKLSLMDNAD--LRSGMEKYMVDLEARTRQAVRAAGGRIPLSFDYVISAEHTEHFNAHAAEDATTAGGAE 278          
BLAST of mRNA_P-littoralis_Contig127.67.2 vs. uniprot
Match: A0A2E7UX52_9DELT (Uncharacterized protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A2E7UX52_9DELT)

HSP 1 Score: 224 bits (572), Expect = 1.040e-65
Identity = 122/242 (50.41%), Postives = 160/242 (66.12%), Query Frame = 3
Query:  219 KKPWGKFLDAGTGTHSLKWINTLDTEGFTAVTADPQFADTTRKEIGFN-VKAPDEIVVGNWRDEQFLEGRVFDTVLADYLVGAIDGFAPYYQDQVFERLKRHVA-PGGSIYLVGMQPLPDH---PGGAAELVCEAARLRDSCILLAGHRPYREYPLDWITRQMRKSGMVVTSAKKMPVLYAPHTVKRQLDVASRKLPIIAVTDPKLAAALEKHISALDGRVRKELAGAGGRVEVGFDYVVAA 929
            ++ WG+ LDAGTG HSL+WI +L+T G+TAVT          + +G + ++A D IV GNW DE  L G VFD VLADYL+GAIDGFAPY+Q ++FERL+ HV    G +Y+VG++P PD    PGG  +LV E ARLRD+CILLAGHR YREYP +W+ R + ++G  V S++ +P++Y    V  QLDV  RKLP I  TD  L A+L+ HI +L  R    L   G  +  G DYV+AA
Sbjct:   20 ERSWGRVLDAGTGMHSLQWIRSLETAGWTAVTGAVSRQQDLERRLGADGMRATDRIVTGNWTDEALLRGEVFDVVLADYLLGAIDGFAPYFQTRLFERLRSHVRRESGRLYVVGLEPYPDRAADPGG--QLVLEIARLRDACILLAGHRCYREYPREWVHRTLAQAGFEVDSSEAIPIVYRRRFVDGQLDVCVRKLPFI--TDLGLRASLKAHIESLRTRAHAHLLRVG-TIPFGADYVIAA 256          
BLAST of mRNA_P-littoralis_Contig127.67.2 vs. uniprot
Match: A0A835ZLB4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZLB4_9STRA)

HSP 1 Score: 224 bits (571), Expect = 1.170e-65
Identity = 98/189 (51.85%), Postives = 151/189 (79.89%), Query Frame = 3
Query:  378 EIVVGNWRDEQFLEGRVFDTVLADYLVGAIDGFAPYYQDQVFERLKRHVAPGGSIYLVGMQPLPDHPGGAAELVCEAARLRDSCILLAGHRPYREYPLDWITRQMRKSGMVVTSAKKMPVLYAPHTVKRQLDVASRKLPIIAVTDPKLAAALEKHISALDGRVRKELAGA-GGRVEVGFDYVVAAELAP 941
            ++VVG+W+D+  L+G  FD+V+ADYL+GA++  +PY+QDQ+F+RL+RH+APGG +Y+VGMQPLPD   GAA++V E  RLRD+C++LAGHRPYREYP+DW+ R +R +G+ VT+A+++P+LY+  +++RQLD+A+R+L  I+  D  +A+ALE+HI  +  R++   A   GG +++GFDY++ AE AP
Sbjct:    4 QVVVGSWQDKSLLQGEQFDSVIADYLIGALNIHSPYFQDQIFQRLRRHIAPGGRLYVVGMQPLPDTAPGAADIVIEVGRLRDACLMLAGHRPYREYPMDWVERHLRAAGLAVTAARRLPILYSEGSIQRQLDMAARRLSFIS--DRDVASALERHIGDIQRRMKGICAAVRGGHIQLGFDYIIVAEAAP 190          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig127.67.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FMQ8_ECTSI6.330e-17077.74Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835Z2H5_9STRA4.190e-9753.90Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7R9U2U4_9STRA3.250e-7549.61Hypothetical protein (Fragment) n=2 Tax=Pinguiococ... [more]
A0A7S1UJN4_9STRA7.910e-7549.80Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
A0A7S1Y0Y4_9STRA1.700e-7449.80Hypothetical protein n=6 Tax=Phaeomonas parva TaxI... [more]
A0A7S1UJN8_9STRA1.950e-7350.00Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
A0A7S2XXT9_9STRA1.950e-7145.55Hypothetical protein n=2 Tax=Fibrocapsa japonica T... [more]
A0A7S3GT58_9STRA6.170e-7044.62Hypothetical protein (Fragment) n=2 Tax=Spumella e... [more]
A0A2E7UX52_9DELT1.040e-6550.41Uncharacterized protein n=1 Tax=Deltaproteobacteri... [more]
A0A835ZLB4_9STRA1.170e-6551.85Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig127contigP-littoralis_Contig127:303706..313808 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FMQ8
Model size1788
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons10
Evalue5.46e-174
EggNOG OGs28I17@1|root,2RZZT@2759|Eukaryota
Ec32 ortholog descriptionS-adenosyl-L-methionine-dependent methyltransferase
Ec32 orthologEc-23_001240.1
Cds size1077
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig127.67.2prot_P-littoralis_Contig127.67.2Pylaiella littoralis U1_48polypeptideP-littoralis_Contig127 303780..313171 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789563.2139957-UTR-P-littoralis_Contig127:303705..3037791680789563.2139957-UTR-P-littoralis_Contig127:303705..303779Pylaiella littoralis U1_48UTRP-littoralis_Contig127 303706..303779 +
1680789563.3298163-UTR-P-littoralis_Contig127:313171..3138081680789563.3298163-UTR-P-littoralis_Contig127:313171..313808Pylaiella littoralis U1_48UTRP-littoralis_Contig127 313172..313808 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789563.2239203-CDS-P-littoralis_Contig127:303779..3037881680789563.2239203-CDS-P-littoralis_Contig127:303779..303788Pylaiella littoralis U1_48CDSP-littoralis_Contig127 303780..303788 +
1680789563.232715-CDS-P-littoralis_Contig127:304191..3042961680789563.232715-CDS-P-littoralis_Contig127:304191..304296Pylaiella littoralis U1_48CDSP-littoralis_Contig127 304192..304296 +
1680789563.2406974-CDS-P-littoralis_Contig127:304380..3044211680789563.2406974-CDS-P-littoralis_Contig127:304380..304421Pylaiella littoralis U1_48CDSP-littoralis_Contig127 304381..304421 +
1680789563.2531185-CDS-P-littoralis_Contig127:305226..3053471680789563.2531185-CDS-P-littoralis_Contig127:305226..305347Pylaiella littoralis U1_48CDSP-littoralis_Contig127 305227..305347 +
1680789563.2664185-CDS-P-littoralis_Contig127:306842..3069831680789563.2664185-CDS-P-littoralis_Contig127:306842..306983Pylaiella littoralis U1_48CDSP-littoralis_Contig127 306843..306983 +
1680789563.274404-CDS-P-littoralis_Contig127:307398..3074861680789563.274404-CDS-P-littoralis_Contig127:307398..307486Pylaiella littoralis U1_48CDSP-littoralis_Contig127 307399..307486 +
1680789563.2829068-CDS-P-littoralis_Contig127:308996..3090751680789563.2829068-CDS-P-littoralis_Contig127:308996..309075Pylaiella littoralis U1_48CDSP-littoralis_Contig127 308997..309075 +
1680789563.291424-CDS-P-littoralis_Contig127:309647..3097561680789563.291424-CDS-P-littoralis_Contig127:309647..309756Pylaiella littoralis U1_48CDSP-littoralis_Contig127 309648..309756 +
1680789563.3080544-CDS-P-littoralis_Contig127:310724..3108521680789563.3080544-CDS-P-littoralis_Contig127:310724..310852Pylaiella littoralis U1_48CDSP-littoralis_Contig127 310725..310852 +
1680789563.3188396-CDS-P-littoralis_Contig127:312915..3131711680789563.3188396-CDS-P-littoralis_Contig127:312915..313171Pylaiella littoralis U1_48CDSP-littoralis_Contig127 312916..313171 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig127.67.2

>prot_P-littoralis_Contig127.67.2 ID=prot_P-littoralis_Contig127.67.2|Name=mRNA_P-littoralis_Contig127.67.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=359bp
MVQTLGSLAGARDPHQHQHQHSVRFSRGRALKLAFSWGRSIEGMQKSAKK
PWGKFLDAGTGTHSLKWINTLDTEGFTAVTADPQFADTTRKEIGFNVKAP
DEIVVGNWRDEQFLEGRVFDTVLADYLVGAIDGFAPYYQDQVFERLKRHV
APGGSIYLVGMQPLPDHPGGAAELVCEAARLRDSCILLAGHRPYREYPLD
WITRQMRKSGMVVTSAKKMPVLYAPHTVKRQLDVASRKLPIIAVTDPKLA
AALEKHISALDGRVRKELAGAGGRVEVGFDYVVAAELAPEPEERCAVSAE
EKGGKEDATYRPKEGKGGTKQHDEAVECKEAAAAIGDGGERKRGGGEVDG
AAEATAVR*
back to top

mRNA from alignment at P-littoralis_Contig127:303706..313808+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig127.67.2 ID=mRNA_P-littoralis_Contig127.67.2|Name=mRNA_P-littoralis_Contig127.67.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=10103bp|location=Sequence derived from alignment at P-littoralis_Contig127:303706..313808+ (Pylaiella littoralis U1_48)
CGACACCAACCGAACAACCGAACAACCATACAACGAGGACGTCGTGAAGA GAACCTTCTACTGACGGCTCGTGAATGGTCCAGGTGATGTCACAAATGAA GGGCCTGCATTGTTTACTGTATGTAGCGTCCGGTCAAAGGCGAACATGCC GTGGAGTAGTTCATGAAAATAGACAACAAAGTTAGTTTCGTATGTGGGGG AGCTAATCTACCGTCAGGGCTGCTTTCTCAGGCTTCTTTCTCGCCGTGCT CTTTTGTCTCTTGCCTTGCAGCGTAGGCACACACACAGCATACCACACGC GCACGTGATATAAATGCACTTTTCTGTTCTCAGCAGGCGCACATGAGCCG CGGAAGCACCACAACCAGTACCAGCGCTCACTCGGCCACGTCCGTCTGCT CATGCTTGCATCCCGTCGTGTTCTTCTCCCTTGTGCCTCATACACACATC ACACCGCATGCATATGATACGCAAACACAACAACAGACACTCGGGTCATT AGCAGGCGCTCGCGATCCGCACCAGCACCAGCACCAGCACTCAGTCAGGT TCAGCCGAGGCCGAGCGCTGAAGCTAGCTTTTTCCTGGGGGCTCGGAGCA GTCGGGGGTCTCCCAAGCAAGATCCGACAGGCGTTTCCCAAGTTCGGAAT GGCGGCCACCGAGGACGCGCTTTTCCGTTCTATCGAGGGCATGCAAAAGT CTGCCAAGAAGCCATGGTGGGGCGGGTTGGTCGCGCGCGGCACCGTATCA TATCATATGACTATCATAAACAGATTTTGCGTACAGCAGAGAAGGTTAAC TTTCCCATGGGGAAGAAATAAAAAATCTCTCCGCTCTATGATAAGAGCAT ACAAGACGAGTACAGTAAACGATTTAAGCGAGACGAACGACTGAGCACCT TCCCAATCCACACAAACCAAGCTTCCATTGTCCTTTTGATGAGGCTTAGG GTTAGGGTAGGGTTGGATCGGTCTTGGGAAGTCGAGGCAAAGTGGCGCCG CACAGCATTCAGGGGGGCATTGATCATCATGTCTATCATACCTCCGGAGG GAACGAAGGATGGACGCGCGCGGTGGCACTGCTGCAGATGGCGTGGTAAA CTCTGTACAACCCCCCCCGCCCTTCACCAAGAATAACGTGATGTACCCTA TGGGAAAAATGTTGGTGGATTCTTTCAGGGGGATGGTGTTCAGTGTCTAA AGAGAACCACAGCCATGCGCGGTGACTGGTAAAAATACCCACTGAAGTCA GCGAACAAGTCAGTACTTCGCGTTTTCCTCCTCCATTTTTGAGAAAATCC GACAATCCGGTTCACATTTGATACTAAAAAAGAACACTCGATCGCCTGAG ACTCTGTGGGATATGTCGAGGCAAGTTCCTTATACAGCTAAGGTTACCTT TCCGTTCGTTTTACACCCGCAGTCTCACAGTTTCCGCGATGAATGAATGG TGTTCTGAATGTAAGTATACTGCTGTGCTGTCCTCTTTGTTGCTGCATTT GCTGCATGGTGTGCACGATAGGGGCAAGTTCTTGGACGCCGGTACGGGGA CCCACTCGTTGAAATGGATCAACACGCTGGACACGGAGGGCTTCACGGCT GTCACCGCGGACCCCCAGTTCGCAGACACCACCCGAAAAGAGGTACAGTG GGGCATGGTACCTCCGTACTTATGACGCTACCTTCCAGCATGCCAGATGG TGACAAAAACAGTCACACTAGCTTCGGCCACGCTCGCTTCGCTGCCGCTA CTGTATGATACTCGGAGTACTTTGTGCGTAGCTTGTGGCAAGGTTCGAAC ACTCTCACGTTACCGCTGCTGTTCAAGTCAACAGCGGTTGGTCGGAGCGC GTGTCGTGTGTTCATCCCGGTGTGGACGCTATATTTTTCTTGCTGCTGGT GCTTGCGCTGCTGGTGCTGCTTTTGCTGTCGAAACGGCAAAGTTGTGTGC GGAGCCCGGTTTTTCGTTCGGCGTCTCAAGTCAAATCTGCTGCATTTTTT GTTTGTTCTTTTCCACGCGCCATGATACGTACTACTTGTACTATTTCTGA CACTCTCAAGCTATCATAAGGGCACCGTACCTGTACATATCTCCTCTCTC GAACCTGTTGCATCTTGGGTTATCATGAAGTGCTCTGTGTCCAGCAGTAG TTGTGTCGGCCTCTCAATGCAAGCATCCTTACTTCCAGCCGCTGCGGTGC AAGCCGGGTGCCCGGGAGGTGCAGTTTGCTAACCCCGAACCCTTCTGACA GCTTGACCGTAAGTTGGAATCTCGGTATGTTACACTGGGATTTTGTACTC ACGCTATACATATCATACCTAGCAGTGAAGCGCGATTTCCTCGTGAGTGA GCTAAATTGTTTGACTCGGAAGAAAGTCGACGAGGGAAAGGAACGGCCGA TTCTTTTTCGCGTTAAAATTTACGATCAAATTTACTATTAGCACCGCAGC AGAGGAAGGCAGAGAAAAATAATAAAGACAAATAAAACTCGGGTGCGACC TTCCTTTCTTTCTTGTGTGTGACGCCGGCTGATGCGCCTAAACTGGCGTC CATAGGTGATGGGAGTCACCACTCGAGCTGAAACACTTCCTGTTGGTTCC ATCTCTGATGAGACATTTGTATGGATTTGTTTCGCTCTCTCAATCAAGTT CCGTTTGTCTTCATCTCAGAAAATCAAAGCGCTGTAGAATTTTTTTGAAT GTTCAAAATTAAGGGCTGCCTGTGTTCGTGCTGTCGATTATTTTGTAGGT TCATTTGTTTCGTGTTGGAACGAACAGAACCGAACCGAACAGAACCGAAC AGAACAGAACATAACAGAACAGAACAGAACAGAACCGAATCGAATCGAAC CGAACCGAACCGAGCCGGATCGGATCGGCGGTTTCAGATCGGGCTCAGGC TCAAGGTCAAGGCTGTAGGTATTGTCTCTGATTGAATGCCCTGAATATTT TACGGTCTTACATGATTCAAGTGTTTCCTTCGTGTTATCTCAGTCTCTAC TGTAATCTCAATCAGGTTTGTGATGTATCGTGCAGTCGGTTATTTGGTCT CGTTTCCTTTTTTGTCGGTGATTTTTCCTTTCCTTTCGGGTGGTAACCGA CGAACCGAACTTAACCAAACCAACCCGACTGTTTCAGATCGGGTTCAATG TCAAGGCTCCGGACGAGATTGTCGTTGGTAACTGGAGGGACGAACAGTTC TTGGAAGGCCGGGTGTTCGACACCGTGCTGGCGGACTACTTGGTCGGGGC CATCGATGGCTTCGCTCCCTACTACCAGGTGTGTGTGTAAAGTTGTTTCG CACGTCAAAATGAGATAATATAAAATAAAAGGCTAAAGGTGGTTCCTTCT TGCCCGTGGTATTGCGTGTGGCTATGTATTGTTTCAAATGTCATAATCGG GTGATGTTACAATAAATGTACAGTCTACGAAGGCCGTGCTTGCCTGTTGG CAGCAGGAGCACACAGCAGTGTGTGGAATGAATCTAGCACGCTGGTACCC CGTAGTTTTGTTTCGGTTTGTGACGCCTATTAACAGGTACCTCCTGTGAG ACCTTGCTCCTGTCTTTCGTAACCCCGACTGATAGGCTGACATATGCCGA AGGGTCAGACTTTCGTCCTAAAGTGCATGAGATGGCAACTCACACACACA AAATGTGAGAATCAACAAGACACATGCCCACGCACACTTCCAGGATCAAG TTTTTGAGCGGCTGAAGAGGCACGTCGCCCCCGGGGGAAGCATTTACCTA GTTGGCATGCAACCATTGCCAGACCATCCTGGTGAGTGCCTTTTTGCACT ACTCCTGTTTGTGGGGCGTCTATTTTATAAGGCAGATGGTATGTTTTACC CGATGACCGATTGCTGCACTGGTGGTTCCCGCGCGTCTGCTTTCAGGCGG ATGCCCTGCTCTGCTTCCGACAGCAGCGACCACCCAGGCAGTCGCTTCCT GTATCAGCCCTTGCACTCGTACATACGTTAAGAAGGCAAATGACACGTTC CGTTTGATCGATAGTGACCACTCTCGGATGGAAAGCATGGCATCGTATAT ATCAAGCTGGTGGGTAATATAGTATTGGCAAGGAATTGCAAAAGTGACTC GTTGTTGGCGGAATATGACAGCGCCGCAGTACGTGTTCAGGCTGATTCTT AACAGCGAAATCAAAACCGAACATCGAAACCAAAGTTGATCATGAGTCCA AAAGATCCATCCCAACTCTGGTTTCGATTGTCAGGTGTCTTAACCAAAAT GGTCGATATCGAAATCAAAATTGAACAACGGGAATTCGAACAGCGTTTGG TCCCTTCAAATAAAAGCTGTGGACGTGGCGAAAGCAACAACAGCAGCAAC CCCATCGCACATGCACGCGGCAGCATGATGTGTGTGTGGTGAAGAGCAGC GACTTGCATGAATGACCAACTAGCAGCAGAGCCAACCCTCCTTGTGTTGT GTATAGTCGTAAAACATCATTCATATCCCACCTCAACAGCAGTACTGCTA CTACTTCTACTGCTGCTGCTGCTGCTGCTGCTCCTGCGGTGGCGCAAAAA AAACACTTTTTGTGCATGGATCAATCTATTTGCTTCTCTTCTGTTTTTAG ACTCCCTACAAAATGTCAACTGCCGTTGGTGGTCTGGTGTAGTTGTTGTA CGTTGACATCACTTCAGCAGCAGCGAGGAGAGCTCTGTGCATGCCCGTGG TGGCTTGTATCATGTGTTTTGTCCTACTCCTGCTGCTTGCTGCCTCTTCA GCATATGCTTAGAATATGTGTGTTCGTGTGGTGAGTGTTGCTCCGCTCTA TCTATTCAAACAGTAAGTAGTTCTCAGCTGTGAGACAGCAGCGAGACCTG CCCAAGACAACCGAGTAGATCAGGGACGCACAATATCGCCATAAAAAGTG TTTCGTTTCGCGAACTTTGGTTTCAATAATGCGAAATCATTTTTTCGAAA CCAGAGTTCGAAATCGAAACACATACTACAGTATAAGAAGGGAAGATCCG CAGTGTTGCGCAGGTATGGGGACCCTTTCTCCTCACTTCACGCAATCACA GCCAATGTTATTTGGGTTTTCGTCTTGTAATCAACTTTGGTCTCGATGTT GGGTTTTGATTTTGTGTTAAGACCCAGCCTCATGAACGATGGTAAGTATA TACGGAGTACTTGGTATTATACGTACAACAAGAACGACTTCACCGGATTC ATGTTTTGTTTTATCAGCACACAGCTTTCAATGCTCTGTGGCAACGTGCT AACTTGGGATTTTCTGTCCGGACTTGTCTGTGATTTTCCAGGCGGCGCGG CGGAACTTGTGTGTGAAGCGGCGCGTCTTCGCGACTCTTGCATACTCCTC GCGGGGCACAGGCCATACCGGTAAGGCTTTCGCCGCGTCAGGTCTGGTTC CCCCGATTTTGGAACTCAATCGATGAATGCACGACTGGCCCACAGTCGTT GTTTTCACTCTTTTTTTCGTCGATTTCACTATCTTTTTTTGCGACGAATG TTGAGTCCGCTTTGAGGCCAACTTGGAAGTGGAACTCCCATGTTGATTTT GTTTTCGCCAAACGGCTCTTAGATCTTTCGTCGGTATCCGTCTTGTCGTT GTTTGGTACAAGTTCCCATCTGACTACACAAGTTTTCCTTTGTTTCAAAC AAGTGGTTATCCCCAACCTCGTGAACTAGAAAGTATTGAAATCACCCCAA CCCTAACCGGGTTTTCGCCAGCAGTAGTTGTGGGTGAACAAATGCCTCTT GCTCAAACACGTTGCAGGTTTGTACGGAGCGCACACGGAGGGCGTATTTT TCCTGTGCGGCCCGTGTTGAATTTCTTGTCTCCGGGCTGTCTGTGTTGTG TGTCTGTCCAGTGGGGATCAGGAGTGACAGCAGAGCCTATCTGATTTCGT CTGTTGTATCATCGTTGTCTTTCTGTTGCCGTTCGATGGCAGGGAGTACC CCCTGGATTGGATCACCCGACAGATGAGAAAGTCCGGTATGGTGGTCACC TCTGCCAAGAAGATGCCCGTCTTGTACGCGCCGCACACCGTCAAGCGACA GGTCGGTGCGCATGATATTATACGAGATAGTTTCGGATTATCCATCATCG AACAAGCTCAGGACTGATTTAACTCAGTGTTGAAATTAAATCAGGGCCAA AAATAGGTCAAATATCGTAGTGGTCCTTGTGCTGTCGCCCCCCCCCCAGA CCGACTTCTAAAGCCCGACATCTCCACACCAGTAGTGAGAAAAGCGTTCG CGCTAGAGAGGGTGGCGTTGGCGTTGGCGTCGGGAAAATCTCGTACGAAC TGTCCGACACACTGCCGTTGGGCATCGGCACCCTCATCGGTACGGAGTTA TCGACGCTTAAATATCGGTCTGATGACGGGGCTGGGGAGGAGCGTGACAC GAAGGATGCTACTGTACCATGCGGTAAATTTGACCCTGGTCTCGAACTTG AGCGTGGTCGATACCGTAGAATATCCGAAACTGTTGAAACTGTTGTTGGT TATTGCAGCAGATACTTTTTGTTTCATCGTCGGTTTTACCGAAATCGGCG ATGGAAAGCGCTGTTTGAATGGATAAGAAGAAAATGACGGGGGGGGGGCG GGATTGGCTTGAAACGGGCGAGAATGATGAGATACACGGCCCCGCAAATG AAGAGCAAAAAAAGCTAAGTCGCGAGGTGATGGTTGATGACTGACTTGCT TACGATCTGATTCGGGTCACCCGTGATACCCCAAAAAACCGTTACACCAG CACTCGAGAATGTACCGATAGTCCAGAAACCATTACTTCAGCACTCGAGA ATGTACCGAAAGTCCAGAAACCGTTACACCAGCACTCGAGAATGTAACGA AAAATTTACCTTCGATACGGCGCCGCACACTCGTATATACCGCACGGAGT ATCGGCCACGGTTTCCGTGCGTCAGTTTCGGCGTCTCTCACGTAAACGAA CTCTGACCGGCCACAACCCCGCCTCCCGATACGCGGACTCGCGGTGCAAT GTTTTGTCTTGTCAAACAGCTCGACGTGGCGTCGCGAAAGCTGCCCATCA TAGCGGTCACCGACCCCAAGCTGGCGGCGGCTCTTGAGAAACACATCTCC GCTTTGGACGGGCGGGTTAGGAAGGAGCTAGCGGGGGCGGGGGGAAGGTG CGTTCCCGCTATGATCAGCAATTCTTTCTTTTTATTCTCCGGGTTGTTAC GTTCTCACAAAACGACAGCTCATCGCGAAAATCTTGCCCGTGGTCACAAG CCAGGCGCAACGAAGTTCACCAGAACAGGAAGAACGAAAACTAAAATTTC CAGGGCTCCTCTCGGTAACGATTTTGGGCACGGTGACAATTACCGTGGTA CTCAACCTCCGCGGTATTAAACGGTTTTTTCTTAATGGTAGTCGGCCCTC GCGGTAAACCCTACCGTGGTACTCAGCCCTCACGGTAATGAACGGTATTT TTTAACGGTAGTCGGCCCTCGCGGTAAACCCTACCGCGGTACTCAGCCCT AACGGTAATGAACGGTATCCCAGTCGTTCCGCTCCTTGAAGCCCAAGCCA TCAGGTGCTTGCACACCGAGCAGAACACGTTTTTTCCGTTGATGGAAGGC GTAAACTCGGGCATCACCCGCCACACCCACGACCTCTTAGCCCTGTTGCC AGCTGTAGCCTTGACAACCCTCACCGTGACCGGTGTGCCATTATCGGAGT GAACCGTCTGTGAGGTGACTGTCAGCTCCATCACCACCGGCTGCGGATGC AGCTGCTGCAGCAGCATCGCCCGGCGCGGAAGGATCCGCGGCGGAACAAA CGCCATTGTCGCCACCTTCCATGACTGCCTTTCCTTGGGCGTGTTGTGTA CGTTTGAAGTGGTGCTTCCTTGTGTGATGTGTGCGTCTGGCGGTTCAAAA CCATCCAATAGTACTTGAACTCCTCATGTATCATATGTACATACTCCGGA GTATGATATGTATGATATCATACGATATCATACGATATCATATCATGCTA AAAAACATGAACGAAATGAAGAACAACAGAACAACATCACGAAAAAAAAA AATCATATGGAAGTAAAAAAAAGAACAGCGTTCTGTCAGAGTTGAACCTA CGTTATCGTGCCCTAGGTCGTGACCACAACCCATACCTTACCTGGTACAA TTACCGTTGGTACGGTGGTGGCGTCACACATTCGTAAAAGTATTTGGTAG TTTGATATATTATGGTAACGGTTGCAAATGTTGTCGAAATCTCGCGGTAT TTCAGTGTTCGCGCGGTAACGGGATTAACGGGAGTAATATTTTTCTACGG AATCGGGAACGGGAAAATGAAATGTTTCGGTAACGGTTGAAACGGGAACG GTAATTTTAAAGTCTCGCGGTATTTTACCAATTACGAATTACCACGGTAA TCACCGCGGTATTCTACCGCGGTAAAATTACCGCAAGGCCCCTTGAAAAT TTCGACATACTGTAAACAGCAGTTTCCAAGCATCCACTACACGAAACATC CCGTTGTTCTTATTTTGTTCTCCTGTGTAATTTATTGCTTTTACCGATTC GCCCCCAACTTTTTTCTCGATTTTTTCCAGATCTTGTTACATAACTGCCT TCCCCCGCCATGTAGCTGTTGAAGCCCTCCTACGGCAGCCTCCCCCTCTG CTGCACCCAACGCTTTCGCTAACCTATTAGGAGTGACTTCGATCCGGGGG CGCACAGAAGGATTCATTTGGTATCGCGGAGTCCCCCATGCTGTCCCATG CACTGTAGGTCGCATAAGAGTCCACGGCACCCCCCCAACCGTATATCCAT GTCAATGGTCGGTCGGTTACGGCATTCCACAAAGACGACGAGAGGTTATG AGCCATGCCAACACCGACATCAAACGGTGTCTGCCATACGTTTGTTCAAA GCTAACTATTCCGAAGCACATGGTTTGGTTCGGTTGCAAAACCCACCACC CTTCTCGGCGCGGACGGCAGTGCCGTTGCCGCGGAAATGCGATATTGAGC TTTCAACATTGGTCCAGGGCATCCCGTGTCGTATCTCGCGTGACCCGAAT GGAATTCCCGGTGGGTTGTTCCCGTGGCGACGTGACAAAAAGCTTGAAGC AGCGGCGGAAGGTTTAAGGCAAATCTCCACTTTGTTCTTGGCCGCCTGTC TCAACTACAACTCCCCAACCCCTTGCGCCCTGCCCCTCTGTCGTCCACGT ACTCAAAAAGGGTGGAAGTGGGTTTCGACTACGTTGTGGCTGCGGAACTC GCTCCGGAACCTGAAGAACGGTGCGCAGTTTCTGCGGAAGAGAAGGGCGG GAAGGAGGACGCGACATACCGTCCAAAAGAGGGCAAGGGTGGTACGAAGC AACACGACGAGGCCGTTGAATGCAAGGAGGCGGCCGCCGCAATAGGGGAT GGAGGGGAAAGGAAGAGGGGTGGCGGCGAGGTTGACGGAGCAGCAGAGGC GACAGCCGTGAGATGACGGCACGTTGTTGGTTCGTCGTTTTTTTAGTGTT GCCACTGCCGAGCACGGATTGAGTGTCGGCAATATGTGCCTCTTTTTTGC GAAAAAAGTTTCCGCCAGGACTGAATCGTTTTTTTCACCGTCCTCGGTTT TTAAGGCCACCCTGTATTCAGTATAATAAAAAACCGGATTTGTAAAGAAA TGGCAGGTGGTGGCATTTTGCAACCGGGAACCAAATGACTTGAATGTAGT GCAAGGGATTTGCACAAAAGTAGCTAAATTTGGAGGGAGTCCAAAAACTA CTTCAAAAAACTTTTTAGTAGCTTTTTGGGCCGAAGATTGAAAAAATAAA CCCCGCCCAATTCCGAACCTCTGTAGGTTATTGGCTTTTCAGATTGCCCG TTAAGCCAGCTACATTCGCGTCGATTTCCATGTTGATAGGGGCTATACCT GCGGAGAACGGTGGCATCGCGCAAACTCACCCGCAGATCTCCCATTTTGG TGCAATTTCGGACTGCTACAGGCCTGTCGCCCCGGTGATTCAGTTGGTTA TTCACGCAACCTTCTGACACTCACGCGTGAGATCGAATCCCAGTGCAGTA ACACGATCTGGGTTTTTTTCTCACGTAGCTTGTGAAAGTGGAAAGCGATC AAT
back to top

Coding sequence (CDS) from alignment at P-littoralis_Contig127:303706..313808+

>mRNA_P-littoralis_Contig127.67.2 ID=mRNA_P-littoralis_Contig127.67.2|Name=mRNA_P-littoralis_Contig127.67.2|organism=Pylaiella littoralis U1_48|type=CDS|length=1077bp|location=Sequence derived from alignment at P-littoralis_Contig127:303706..313808+ (Pylaiella littoralis U1_48)
ATGGTCCAGACACTCGGGTCATTAGCAGGCGCTCGCGATCCGCACCAGCA
CCAGCACCAGCACTCAGTCAGGTTCAGCCGAGGCCGAGCGCTGAAGCTAG
CTTTTTCCTGGGGGCGTTCTATCGAGGGCATGCAAAAGTCTGCCAAGAAG
CCATGGGGCAAGTTCTTGGACGCCGGTACGGGGACCCACTCGTTGAAATG
GATCAACACGCTGGACACGGAGGGCTTCACGGCTGTCACCGCGGACCCCC
AGTTCGCAGACACCACCCGAAAAGAGATCGGGTTCAATGTCAAGGCTCCG
GACGAGATTGTCGTTGGTAACTGGAGGGACGAACAGTTCTTGGAAGGCCG
GGTGTTCGACACCGTGCTGGCGGACTACTTGGTCGGGGCCATCGATGGCT
TCGCTCCCTACTACCAGGATCAAGTTTTTGAGCGGCTGAAGAGGCACGTC
GCCCCCGGGGGAAGCATTTACCTAGTTGGCATGCAACCATTGCCAGACCA
TCCTGGCGGCGCGGCGGAACTTGTGTGTGAAGCGGCGCGTCTTCGCGACT
CTTGCATACTCCTCGCGGGGCACAGGCCATACCGGGAGTACCCCCTGGAT
TGGATCACCCGACAGATGAGAAAGTCCGGTATGGTGGTCACCTCTGCCAA
GAAGATGCCCGTCTTGTACGCGCCGCACACCGTCAAGCGACAGCTCGACG
TGGCGTCGCGAAAGCTGCCCATCATAGCGGTCACCGACCCCAAGCTGGCG
GCGGCTCTTGAGAAACACATCTCCGCTTTGGACGGGCGGGTTAGGAAGGA
GCTAGCGGGGGCGGGGGGAAGGGTGGAAGTGGGTTTCGACTACGTTGTGG
CTGCGGAACTCGCTCCGGAACCTGAAGAACGGTGCGCAGTTTCTGCGGAA
GAGAAGGGCGGGAAGGAGGACGCGACATACCGTCCAAAAGAGGGCAAGGG
TGGTACGAAGCAACACGACGAGGCCGTTGAATGCAAGGAGGCGGCCGCCG
CAATAGGGGATGGAGGGGAAAGGAAGAGGGGTGGCGGCGAGGTTGACGGA
GCAGCAGAGGCGACAGCCGTGAGATGA
back to top