prot_P-littoralis_Contig127.50.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-littoralis_Contig127.50.1
Unique Name	prot_P-littoralis_Contig127.50.1
Type	polypeptide
Organism	Pylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length	320

Homology

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BLAST of mRNA_P-littoralis_Contig127.50.1 vs. uniprot
Match: A0A6H5K716_9PHAE (RWP-RK domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K716_9PHAE)

HSP 1 Score: 97.8 bits (242), Expect = 6.090e-19
Identity = 51/107 (47.66%), Postives = 67/107 (62.62%), Query Frame = 0

Query:  164 IISNTAGSKRSRETLPDIAKRIPVDALRPYLRMPLLRAAKELSISATTLKRLCRLYGIKRWPFRQISGIDRTVTRLEAELELSINRVPSADMADSIAEHIQQLNAHR 270
            +   T      RETL DIAKRIPV+ +R Y   PL  AA+ + IS TTLKRLCR +G+KRWP RQI GI+RT+  LE + + +       D  DS+AE ++QL+  R
Sbjct:   97 VPRRTPSKGNKRETLADIAKRIPVELMRHYFNYPLRAAAEAMDISVTTLKRLCRRHGVKRWPHRQICGINRTLNDLETQHDTA-----KGDEVDSVAEQLRQLHRRR 198

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BLAST of mRNA_P-littoralis_Contig127.50.1 vs. uniprot
Match: D8LEC2_ECTSI (Putative NIN-like transcription factor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEC2_ECTSI)

HSP 1 Score: 94.4 bits (233), Expect = 9.230e-18
Identity = 50/107 (46.73%), Postives = 65/107 (60.75%), Query Frame = 0

Query:  164 IISNTAGSKRSRETLPDIAKRIPVDALRPYLRMPLLRAAKELSISATTLKRLCRLYGIKRWPFRQISGIDRTVTRLEAELELSINRVPSADMADSIAEHIQQLNAHR 270
            +   T      RETL DIAKRIPV  +R Y   PL  AA+ + IS TTLKRLCR +G+KRWP RQI GI+RT+  LE + + +       D  DS+A+ ++QL   R
Sbjct:   85 VPRRTPSKGNKRETLADIAKRIPVGLMRHYFNYPLRAAAEAMDISVTTLKRLCRRHGVKRWPHRQICGINRTLNDLETQHDTA-----KGDEVDSVADQLRQLYRRR 186

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BLAST of mRNA_P-littoralis_Contig127.50.1 vs. uniprot
Match: D7FN15_ECTSI (Putative NIN-like transcription factor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN15_ECTSI)

HSP 1 Score: 89.0 bits (219), Expect = 5.460e-17
Identity = 50/102 (49.02%), Postives = 68/102 (66.67%), Query Frame = 0

Query:  169 AGSKRSRETLPDIAKRIPVDALRPYLRMPLLRAAKELSISATTLKRLCRLYGIKRWPFRQISGIDRTVTRLEAELELSINRVPSADMADSIAEHIQQLNAHR 270
            AGSKR  E L DIAKRIPV+ +R Y   PL  +A+ + IS TTLKRLCR +G+KRWP RQISG++RT+  LEA+ + +      A    ++ E ++QL+  R
Sbjct:   54 AGSKR--EVLADIAKRIPVELMREYFNYPLRVSAEAMHISVTTLKRLCRRHGVKRWPHRQISGLNRTLGDLEAQHDAARGEEEIA----AVEEELRQLHRRR 149

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BLAST of mRNA_P-littoralis_Contig127.50.1 vs. uniprot
Match: A0A6H5JLN8_9PHAE (RWP-RK domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLN8_9PHAE)

HSP 1 Score: 89.0 bits (219), Expect = 8.570e-16
Identity = 47/97 (48.45%), Postives = 65/97 (67.01%), Query Frame = 0

Query:  175 RETLPDIAKRIPVDALRPYLRMPLLRAAKELSISATTLKRLCRLYGIKRWPFRQISGIDRTVTRLEAELELSINRVPSADMADS-IAEHIQQLNAHR 270
            RETL DIA RIPV  +RPY   PL  AA+ ++IS TTLKRLCR +G+KRWP RQISGI+R +  LE + + +  R     + ++ ++E +Q+L   R
Sbjct: 1011 RETLGDIALRIPVTVMRPYFNYPLRTAAEAMNISVTTLKRLCRRHGVKRWPHRQISGINRAMAHLEFQQDQAGRRNSEITIRNNQVSEQMQELLRRR 1107

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BLAST of mRNA_P-littoralis_Contig127.50.1 vs. uniprot
Match: A0A6H5KFL8_9PHAE (RWP-RK domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFL8_9PHAE)

HSP 1 Score: 87.0 bits (214), Expect = 3.110e-15
Identity = 49/102 (48.04%), Postives = 67/102 (65.69%), Query Frame = 0

Query:  169 AGSKRSRETLPDIAKRIPVDALRPYLRMPLLRAAKELSISATTLKRLCRLYGIKRWPFRQISGIDRTVTRLEAELELSINRVPSADMADSIAEHIQQLNAHR 270
            AGSKR  E L DIAKRIPV+ +R Y   PL  +A+ + IS TTLKRLCR +G+KRWP RQISG++R +  LEA+ + +      A    ++ E ++QL+  R
Sbjct:   55 AGSKR--EVLADIAKRIPVELMREYFNYPLRVSAEAMHISVTTLKRLCRRHGVKRWPHRQISGLNRALGDLEAQHDAARGEEEIA----AVEEELRQLHRRR 150

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BLAST of mRNA_P-littoralis_Contig127.50.1 vs. uniprot
Match: D8LNV2_ECTSI (Putative NIN-like transcription factor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNV2_ECTSI)

HSP 1 Score: 87.0 bits (214), Expect = 3.400e-15
Identity = 42/66 (63.64%), Postives = 50/66 (75.76%), Query Frame = 0

Query:  175 RETLPDIAKRIPVDALRPYLRMPLLRAAKELSISATTLKRLCRLYGIKRWPFRQISGIDRTVTRLE 240
            RETL DIA RIPV  +RPY   PL  AA+ ++IS TTLKRLCR +G+KRWP RQISGI+R +  LE
Sbjct:  785 RETLGDIAHRIPVTVMRPYFNYPLRTAAEAMNISVTTLKRLCRRHGVKRWPHRQISGINRAMAHLE 850

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BLAST of mRNA_P-littoralis_Contig127.50.1 vs. uniprot
Match: A0A6H5L9C1_9PHAE (RWP-RK domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L9C1_9PHAE)

HSP 1 Score: 83.6 bits (205), Expect = 3.780e-14
Identity = 39/66 (59.09%), Postives = 50/66 (75.76%), Query Frame = 0

Query:  175 RETLPDIAKRIPVDALRPYLRMPLLRAAKELSISATTLKRLCRLYGIKRWPFRQISGIDRTVTRLE 240
            RETL DIA+R+PV+ L PY    L  AA  + IS T+LKRLCR +G+KRWP RQ+SG++RTV+ LE
Sbjct:   44 RETLQDIARRVPVEVLLPYFNFSLRTAADAMCISVTSLKRLCRRHGVKRWPHRQLSGLNRTVSHLE 109

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BLAST of mRNA_P-littoralis_Contig127.50.1 vs. uniprot
Match: A0A835Z7T4_9STRA (RWP-RK domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7T4_9STRA)

HSP 1 Score: 76.6 bits (187), Expect = 9.240e-14
Identity = 34/69 (49.28%), Postives = 52/69 (75.36%), Query Frame = 0

Query:  175 RETLPDIAKRIPVDALRPYLRMPLLRAAKELSISATTLKRLCRLYGIKRWPFRQISGIDRTVTRLEAEL 243
            R+T  ++AKR+PV  L  +  +PL  AA+ELS+S T LK+LCR YGIKRWP RQ+S +++++ +LE ++
Sbjct:    3 RQTSEEVAKRLPVSVLEEFYHVPLNIAARELSVSLTMLKKLCRQYGIKRWPHRQVSSLNKSLGKLEEKI 71

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BLAST of mRNA_P-littoralis_Contig127.50.1 vs. uniprot
Match: D7G8F1_ECTSI (Putative NIN-like transcription factor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8F1_ECTSI)

HSP 1 Score: 80.9 bits (198), Expect = 2.590e-13
Identity = 41/86 (47.67%), Postives = 56/86 (65.12%), Query Frame = 0

Query:  175 RETLPDIAKRIPVDALRPYLRMPLLRAAKELSISATTLKRLCRLYGIKRWPFRQISGIDRTVTRLEAELELSINRVPSADMADSIA 260
            RE   DIA+R+P D LR ++ M  + AAK + IS TTLK+LCR YGI RWP+RQI+G  R V RL   L+   + +P A + D ++
Sbjct:   20 REIFRDIARRVPKDKLRLFMTMTQVAAAKAIGISPTTLKKLCRYYGISRWPYRQIAGKTRAVDRLGELLDEPSSELPKAVLKDHLS 105

[Close]

BLAST of mRNA_P-littoralis_Contig127.50.1 vs. uniprot
Match: A0A6H5KE17_9PHAE (RWP-RK domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE17_9PHAE)

HSP 1 Score: 79.3 bits (194), Expect = 1.340e-12
Identity = 34/75 (45.33%), Postives = 55/75 (73.33%), Query Frame = 0

Query:  170 GSKRSRETLPDIAKRIPVDALRPYLRMPLLRAAKELSISATTLKRLCRLYGIKRWPFRQISGIDRTVTRLEAELE 244
            GS   R+T  D+A R+P++ L  +  +PL  AA++L++S T LK+LCR YG+KRWP RQ+S +D+T ++LE +++
Sbjct:  460 GSSLKRQTSEDVAARLPLEVLECFYHVPLNVAAQQLNVSLTMLKKLCRAYGVKRWPHRQVSSLDKTTSKLEDKIK 534

The following BLAST results are available for this feature:

BLAST of mRNA_P-littoralis_Contig127.50.1 vs. uniprot

BLAST of mRNA_P-littoralis_Contig127.50.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5K716_9PHAE	6.090e-19	47.66	RWP-RK domain-containing protein n=1 Tax=Ectocarpu...	[more]
D8LEC2_ECTSI	9.230e-18	46.73	Putative NIN-like transcription factor n=1 Tax=Ect...	[more]
D7FN15_ECTSI	5.460e-17	49.02	Putative NIN-like transcription factor n=1 Tax=Ect...	[more]
A0A6H5JLN8_9PHAE	8.570e-16	48.45	RWP-RK domain-containing protein n=1 Tax=Ectocarpu...	[more]
A0A6H5KFL8_9PHAE	3.110e-15	48.04	RWP-RK domain-containing protein n=1 Tax=Ectocarpu...	[more]
D8LNV2_ECTSI	3.400e-15	63.64	Putative NIN-like transcription factor n=1 Tax=Ect...	[more]
A0A6H5L9C1_9PHAE	3.780e-14	59.09	RWP-RK domain-containing protein n=1 Tax=Ectocarpu...	[more]
A0A835Z7T4_9STRA	9.240e-14	49.28	RWP-RK domain-containing protein (Fragment) n=1 Ta...	[more]
D7G8F1_ECTSI	2.590e-13	47.67	Putative NIN-like transcription factor n=1 Tax=Ect...	[more]
A0A6H5KE17_9PHAE	1.340e-12	45.33	RWP-RK domain-containing protein n=1 Tax=Ectocarpu...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003035	RWP-RK domain	PFAM	PF02042	RWP-RK	coord: 187..230 e-value: 2.1E-15 score: 56.4
IPR003035	RWP-RK domain	PROSITE	PS51519	RWP_RK	coord: 166..252 score: 16.972326
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 106..147
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..151
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 22..41
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 91..105
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 300..319
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 42..62
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 302..319
IPR044607	Transcription factor RKD-like	PANTHER	PTHR46373	PROTEIN RKD4	coord: 57..258

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-littoralis_Contig127	contig	P-littoralis_Contig127:218530..224593 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Pylaiella littoralis U1_48 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-littoralis_Contig127.50.1	mRNA_P-littoralis_Contig127.50.1	Pylaiella littoralis U1_48	mRNA	P-littoralis_Contig127 218510..224627 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-littoralis_Contig127.50.1 ID=prot_P-littoralis_Contig127.50.1|Name=mRNA_P-littoralis_Contig127.50.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=320bp
MTTSDKRVAPTISGCFRRGHQQQHLLLKEMTMKEDGKTNDSTSSSKDSGD
TTSVYGTTTEAASSSEDDDDLHQQQEEQQQVKQEPTSNKKRPVFRHRHNA
SKKARTLSQHHTQQQQQGSSSNNSSTSQRVLRRPRVVSLSSNSDSAAAGD
FGDDDGKYHGFEDIISNTAGSKRSRETLPDIAKRIPVDALRPYLRMPLLR
AAKELSISATTLKRLCRLYGIKRWPFRQISGIDRTVTRLEAELELSINRV
PSADMADSIAEHIQQLNAHRPAPRTISRSYSSSSSSSRWSTRFTSTSSTL
LSHLRRRHRRRRRFHHPRS*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR003035	RWP-RK_dom
IPR044607	RKD-like