mRNA_P-littoralis_Contig1267.3.5 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig1267.3.5
Unique NamemRNA_P-littoralis_Contig1267.3.5
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig1267.3.5 vs. uniprot
Match: D7G2U6_ECTSI (ABC transporter domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2U6_ECTSI)

HSP 1 Score: 840 bits (2171), Expect = 7.590e-300
Identity = 441/662 (66.62%), Postives = 511/662 (77.19%), Query Frame = 1
Query:    1 QVDFRFRNIRFSVEVSKAKAFVMGEKAGVKKILKGVSGAVRSGQILAIVGASGAGKTSLLDVLVGKIKDGTKGLSVTGDITVNGEIMSRAFFLENAAYVPQEDRLWSALTVRENLTFASRMYDPVMSETQCKKRVDEIVASLGLESCQHTKVGNVFLKGISGGQKRRTSIGAELVVQRKIVFLDEPTSGLDAASASEIMALLRRVASETGMIIITSVHQPSTRVFNSFDQ--------------------------------------------------------------VILLTMGQTAYFGPAVDSLDHFAKLGHTPVGLVNPADYLLEITNSDFSDAKLVQQLADAWFKTAACETLNERLESTYPAPILPGRKPGCLSYFRQLRALIARATLNSIRDPATYSLRLVLYLCFSFFLGSVYFQVENTQSDILDRVFLIIWINAFNSFMNMAAIPVFTLEKEAVVKEVENGQYGVASYCIANSFVQIPFVLLIALCCATPVFFITSMNDDIVRYGQFIVAMFLMLLVIESLTQIVGVVLQNFVLGIAVFASILSMFFVFNGFFIIPNNIPSFWIWIYWISPLRYSWEMMAKIVFDGKTFSGFNDCLTCYGETGEQVLDSLSVGGGTNLNDVSLIGHSGILVGLTVVWRLVHYVVLKRSMF 1800
            +VDFRFR++RFSVEVSK KA +MG +AGVK IL GVSGAV SGQILAI+G+SGAGKTSLLDVLVGK+  GTKGL +TGD+TVNG+ MS++FFLENAAYVPQEDRLWSALTVRENLTFA +MY P +S     KRV++++ASLGLE CQHTKVGNVFLKGISGGQKRRTSIG ELVVQRKI+FLDEPTSGLDAASASEIM+LLRR+ASET +III SVHQPS+RVFNSFDQ                                                              VILLTMGQTAYFGPA DSLDHFA+LGH P GLVNPADYLLEITN+DFSD + VQ+LAD+W +T  C  LN RLE+  P P+  G K G L+   QLR LI RA++NS+RDPA Y+LR              Y+QVENTQ DIL+RVFLI+WINAFNS+M+MAAIPVF LEKEAVVKEV+NGQYGVA +CIAN+ VQ+PFVLLIALCC TPV++IT MNDD +RY QFI+ MFLML VIESL Q+VGV+++NFVLGIAVFAS LSMFF+FNGFFI P N+P FW+W+YWISPLRYSWE MA+IVF+G+T++G + C+TCYG TG +VLDSLS  GGTNLNDVS+    G LVGL+VVWRL+HYV LKRS+F
Sbjct:   35 KVDFRFRDVRFSVEVSKMKASLMGGEAGVKHILGGVSGAVESGQILAIIGSSGAGKTSLLDVLVGKVSAGTKGLDITGDVTVNGKAMSKSFFLENAAYVPQEDRLWSALTVRENLTFACKMYSPALSRADSDKRVNKVLASLGLEGCQHTKVGNVFLKGISGGQKRRTSIGVELVVQRKILFLDEPTSGLDAASASEIMSLLRRLASETDVIIIASVHQPSSRVFNSFDQPLDTDVAGTVLRQDALVESEYQRERRQADEMTPRHCGTLPCFPLSLAPSTTTPIPRFSQHYTVILLTMGQTAYFGPASDSLDHFARLGHEPKGLVNPADYLLEITNADFSDTEAVQELADSWKETPGCRALNARLEAPLPPPLEEGSKAGYLAALLQLRTLIVRASMNSVRDPAAYALR--------------YYQVENTQEDILNRVFLILWINAFNSYMDMAAIPVFELEKEAVVKEVQNGQYGVAGFCIANAVVQVPFVLLIALCCITPVYWITDMNDDPLRYLQFILLMFLMLFVIESLAQLVGVIVKNFVLGIAVFASCLSMFFIFNGFFIDPINMPDFWLWLYWISPLRYSWEAMAQIVFEGQTYAGMDTCVTCYGTTGAEVLDSLS-NGGTNLNDVSIAAWCGALVGLSVVWRLIHYVALKRSIF 681          
BLAST of mRNA_P-littoralis_Contig1267.3.5 vs. uniprot
Match: A0A6H5JKZ7_9PHAE (ABC protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JKZ7_9PHAE)

HSP 1 Score: 786 bits (2029), Expect = 1.050e-278
Identity = 417/627 (66.51%), Postives = 485/627 (77.35%), Query Frame = 1
Query:    1 QVDFRFRNIRFSVEVSKAKAFVMGEKAGVKKILKGVSGAVRSGQILAIVGASGAGKTSLLDVLVGKIKDGTKGLSVTGDITVNGEIMSRAFFLENAAYVPQEDRLWSALTVRENLTFASRMYDPVMSETQCKKRVDEIVASLGLESCQHTKVGNVFLKGISGGQKRRTSIGAELVVQRKIVFLDEPTSGLDAASASEIMALLRRVASETGMIIITSVHQPSTRVFNSFDQVILLTMGQTAYFGPAVDSLDHFAKLGHTPVGLVNPADYLLEITNSDFSDAKLVQQLADAWFKTAACETLNERLESTYPAPILPGRKPGCLSYFRQLRALIARATLNSIRDPATYSLRLVLYLCFSFFLGSVYFQVENTQSDILDRVFLIIWINAFNSFMNMAAIPVFTLEKEAVVKEVENGQYGVASYCIANSFVQIPFVLLIALCCATPVFFITSMNDDIVRYGQFIVAMFLMLLVIESLTQIVGVVLQNFVLGIAVFASILSMFFVFNGFFIIPNNIPSFWIWIYWISPLRYSWEMMAKIVFDGKTFSGFNDCLTCYGETGEQ---------------------------VLDSLSVGGGTNLNDVSLIGHSGILVGLTVVWRLVHYVVLKRSMF 1800
            QVDFRFR++R+SVEVS+ KA +MG +AGVK+ILKGVSG V SGQILAI+G+SGAGKTSLLDVLVGK+  GTKGL +TG++TVNG+ MS++FFLENAAYVPQEDRLWSALTVRENL FA +MY P +S  +C KRVD+++ASLGLE CQH KVGNVFLKG+SGGQKRRTSIG ELVVQRKI+FLDEPTSGLDAASASEIMALL+ +ASETG+IIITSVHQPS+RVFNSFDQVILLTMGQTAYFGPAVDSLDHFA LGH P GLVNPADYLLEITNSDFSD K VQ+LAD W +T A   LN R+E+    P+  G K G  S   QLR L+ARA++NS+RDPA Y+LR              Y+QVENTQ DIL+RVFLI+WINAFNS+M+MAAIPVF  EK+AV     NGQYG+A++C+AN+ VQ PFVLLIALCC+TPV++IT MNDD VRY QF+V MFLML V+ESL Q+VGVV++NFVLGIAVFAS LSMFF+FNG                      YSWE MAKIV DG+T++G + C+TCYG TGEQ                           VLDSLS  GGTNLNDVS+    G LVGL + WR++HYV LKRS+F
Sbjct:   70 QVDFRFRDVRYSVEVSQTKASLMGGEAGVKQILKGVSGGVESGQILAIIGSSGAGKTSLLDVLVGKVSAGTKGLDITGEVTVNGKTMSKSFFLENAAYVPQEDRLWSALTVRENLMFACKMYSPALSRGECNKRVDKVLASLGLEGCQHIKVGNVFLKGVSGGQKRRTSIGVELVVQRKILFLDEPTSGLDAASASEIMALLKHLASETGVIIITSVHQPSSRVFNSFDQVILLTMGQTAYFGPAVDSLDHFASLGHEPQGLVNPADYLLEITNSDFSDKKAVQRLADVWKETPAYRALNARIEAPLSPPLTEGSKAGWFSATLQLRELVARASMNSVRDPAAYALR--------------YYQVENTQEDILNRVFLILWINAFNSYMDMAAIPVFEQEKDAV-----NGQYGIAAFCVANAVVQAPFVLLIALCCSTPVYWITDMNDDPVRYLQFVVVMFLMLFVVESLAQLVGVVVKNFVLGIAVFASFLSMFFIFNG----------------------YSWEAMAKIVIDGQTYAGLDTCVTCYGTTGEQASTTLVVDMHMHLFVIVRTNTQALLSSVLDSLS-NGGTNLNDVSIGAWCGALVGLALGWRVIHYVALKRSIF 654          
BLAST of mRNA_P-littoralis_Contig1267.3.5 vs. uniprot
Match: A0A6H5JKJ8_9PHAE (ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKJ8_9PHAE)

HSP 1 Score: 707 bits (1824), Expect = 1.600e-244
Identity = 391/646 (60.53%), Postives = 457/646 (70.74%), Query Frame = 1
Query:    4 VDFRFRNIRFSVEVSKAKAFVMGEKAGVKKILKGVSGAVRSGQILAIVGASGAGKTSLLDVLVGKIKDGTKGLSVTGDITVNGEIMSRAFFLENAAYVPQEDRLWSALTVRENLTFASRMYDPVMSETQCKKRVDEIVASLGLESCQHTKV-GNVFLKGISGGQKRRTSIGAELVVQRKIVFLDEPTSGLDAASASEIMALLRRVASETGMIIITSVHQPSTRVFNSFDQVILLTMGQTAYFGPAVDSLDHFAKLGHTPVGLVNPADYLLEITNSDFSDAKLVQQLADAWFKTAACETLNERLESTYPAPILPGRKPGCLSYFRQLRALIARATLNSIRDPATYSLRLVLYLCFSFFLGSVYFQVENTQSDILDRVFLIIWINAFNS-----------FMNMAAIPVFTLEKEAVVKEVENGQYGVASYCIANSFVQIPFVLLIALCCATPVFFITSMNDDIVRYGQFIVAMFLMLLVIESLTQIVGVVLQNFVLGIAVFASILSMFFVFNGFFIIPNNIPSFWIWIYWISPLRYSWEMMAKIVFDGKTFSGFNDCLTCYGETGEQVL---------DSLSVGGGTNLNDVSLIGHSGILVGLTVVWRLVHYVVLKRSMF*AFYFGVCVLVEQDSSSIETWCVASL 1878
            VDFRFR++R+SVEVSK KA +MG KAGVK IL+GVSGAV SGQILAI+G SGAGKTSLLDVLVGKI  GTKGL VTGDITVNG++MS++FFLENAAYVPQEDRLWSALTVRENLTFA +MY P+MS  +C KRV +++A LGLE CQHTKV GNVFL+G SGGQKRRTSIG ELV QRKI+FLDEPTSGLDAASASEIM LL  +AS+TGMIII+SVHQPS+RVFNSFDQVILLTMGQTAYFGPAVDSLDHFA+LGH P GLVNPADYLLEITNSDFSD   VQ+LADAW +T AC+ L+ RL +    P+  G K   LS   QLRAL+ RA +NS+RDPA Y+L               Y++VENTQ DIL+RVFLIIWINAFNS           F      P   L +  V    +NGQY VAS+CIAN+ VQ PFVLLIALCC+TP ++IT MNDD VRY QF+V MFL+L V+ESL Q+VGV++++ +                      P                RYSWE M KIVFDG+T+ GF+ C+TC+G TGEQ           DSLS  GG N NDVS+      LVGL++VWR+VHYV LK       + G   L ++ +  +   CV  L
Sbjct:    4 VDFRFRDVRYSVEVSKTKASLMGGKAGVKHILRGVSGAVESGQILAIIGPSGAGKTSLLDVLVGKISAGTKGLDVTGDITVNGKVMSKSFFLENAAYVPQEDRLWSALTVRENLTFACKMYSPMMSREECNKRVGKVLARLGLEGCQHTKVVGNVFLRGTSGGQKRRTSIGVELVFQRKILFLDEPTSGLDAASASEIMDLLSGLASDTGMIIISSVHQPSSRVFNSFDQVILLTMGQTAYFGPAVDSLDHFARLGHEPKGLVNPADYLLEITNSDFSDTNAVQRLADAWKETPACQVLDARLHAPASPPLAEGSKASWLSALLQLRALVVRAWMNSLRDPAVYALS--------------YYRVENTQEDILNRVFLIIWINAFNSSPGICKKHTDCFPKYVLDPTLPLHRTLVTLPQQNGQYAVASFCIANAVVQAPFVLLIALCCSTPAYWITDMNDDPVRYLQFVVLMFLLLFVVESLAQVVGVLVKDHLKAFR------------------PGG--------------RYSWEAMVKIVFDGQTYEGFDSCVTCFGRTGEQASTTCSYRFCQDSLS-NGGINYNDVSIAAWCCTLVGLSLVWRVVHYVALK-------HVGNVELGKEFTEDVVEACVNKL 595          
BLAST of mRNA_P-littoralis_Contig1267.3.5 vs. uniprot
Match: D7G2W0_ECTSI (ATP transporter, putative MET type n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2W0_ECTSI)

HSP 1 Score: 617 bits (1590), Expect = 9.660e-216
Identity = 317/431 (73.55%), Postives = 363/431 (84.22%), Query Frame = 1
Query:   67 MGEKAGVKKILKGVSGAVRSGQILAIVGASGAGKTSLLDVLVGKIKDGTKGLSVTGDITVNGEIMSRAFFLENAAYVPQEDRLWSALTVRENLTFASRMYDPVMSETQCKKRVDEIVASLGLESCQHTKVGNVFLKGISGGQKRRTSIGAELVVQRKIVFLDEPTSGLDAASASEIMALLRRVASETGMIIITSVHQPSTRVFNSFDQVILLTMGQTAYFGPAVDSLDHFAKLGHTPVGLVNPADYLLEITNSDFSDAKLVQQLADAWFKTAACETLNERLESTYPAPILPGRKPGCLSYFRQLRALIARATLNSIRDPATYSLRLVLYLCFSFFLGSVYFQVENTQSDILDRVFLIIWINAFNSFMNMAAIPVFTLEKEAVVKEVENGQYGVASYCIANSFVQIPFVLLIALCCATPVFFITSMNDDIVR 1359
            MG  AGVKKIL+GVSGAV SGQILAI+G+SG+GKTSLLDVLVG+I   TKGL +TG++TVNG+ MS++FFLENAAYVPQEDRLWSALTVRENL  A +MY P MS  +C  RVDE++ SLGLESCQHTKVGN+FLKGISGGQKRRTSIG ELVVQRKI+FLDEPTSGLDAASAS IM LLRR+ASETG+IIITSVHQPS+RVFNSFDQVILLTMGQTAYFGPAVDSLDHFA LGH P GLVNPADYLLEITNSDFSDAK VQ+LADAW  ++AC+TL+ RL    P  +    + G +S  RQLRALIARAT++S+RDPA Y+LR              Y++VENTQ DIL+RVFLIIW+NAFNS+M+MAAIP F  EK+AVVKEV+NGQYGVA +CIAN+ VQ PFVLLIA+CC+TPV++ T MNDD  R
Sbjct:    1 MGGIAGVKKILRGVSGAVESGQILAIIGSSGSGKTSLLDVLVGRINPNTKGLHITGNVTVNGKAMSKSFFLENAAYVPQEDRLWSALTVRENLMLACKMYIPNMSRAECDHRVDEVLTSLGLESCQHTKVGNIFLKGISGGQKRRTSIGVELVVQRKILFLDEPTSGLDAASASGIMDLLRRLASETGVIIITSVHQPSSRVFNSFDQVILLTMGQTAYFGPAVDSLDHFASLGHQPDGLVNPADYLLEITNSDFSDAKAVQRLADAWKDSSACKTLHSRLRGPLPPSLEAKPEAGWMSNLRQLRALIARATMSSVRDPAAYALR--------------YYKVENTQEDILNRVFLIIWVNAFNSYMDMAAIPAFAQEKDAVVKEVQNGQYGVAMFCIANAIVQAPFVLLIAICCSTPVYWTTDMNDDPTR 417          
BLAST of mRNA_P-littoralis_Contig1267.3.5 vs. uniprot
Match: D7G3K1_ECTSI (ATP-binding cassette superfamily n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3K1_ECTSI)

HSP 1 Score: 506 bits (1303), Expect = 2.230e-172
Identity = 256/347 (73.78%), Postives = 296/347 (85.30%), Query Frame = 1
Query:    1 QVDFRFRNIRFSVEVSKAKAFVMGEKAGVKKILKGVSGAVRSGQILAIVGASGAGKTSLLDVLVGKIKDGTKGLSVTGDITVNGEIMSRAFFLENAAYVPQEDRLWSALTVRENLTFASRMYDPVMSETQCKKRVDEIVASLGLESCQHTKVGNVFLKGISGGQKRRTSIGAELVVQRKIVFLDEPTSGLDAASASEIMALLRRVASETGMIIITSVHQPSTRVFNSFDQVILLTMGQTAYFGPAVDSLDHFAKLGHTPVGLVNPADYLLEITNSDFSDAKLVQQLADAWFKTAACETLNERLESTYPAPILPGRKPGCLSYFRQLRALIARATLNSIRDPATYSLR 1041
            +VD RFR++R+SVEVSK KA +MG +AGVK IL+GVSGAV SGQILAI+G+SGAGKTSLLDVLVGK+   TKGL++TGD+ VNG+ MS++FFLENAAYVPQEDRLWSALTVRENLTFA +MY P++S  +C KRVDE++ SLGLE CQHTKVGN+FLKG SGG+KRRTSIG ELV  RKI+FLDEPTSGLDA SASEIM LLR +AS+TGMIIITSVHQPS+RVFNSFDQV+LLTMGQTAYFGPAVDSL HFA+LGH P GLVNPADYLLEITNS FSD K VQ+LADAW +T AC  L+ RL +    P+  G K G LS F QLRAL+ R ++NS+RDPA Y+LR
Sbjct:   65 KVDLRFRDVRYSVEVSKTKASLMGGEAGVKHILRGVSGAVESGQILAIIGSSGAGKTSLLDVLVGKVSARTKGLNITGDVNVNGKAMSKSFFLENAAYVPQEDRLWSALTVRENLTFACKMYSPMLSRGECSKRVDEVLVSLGLEGCQHTKVGNIFLKGTSGGEKRRTSIGVELVFLRKILFLDEPTSGLDAGSASEIMDLLRGLASDTGMIIITSVHQPSSRVFNSFDQVMLLTMGQTAYFGPAVDSLAHFARLGHEPKGLVNPADYLLEITNSHFSDTKAVQRLADAWKETPACRALDTRLCAPVSPPLAEGSKAGWLSSFLQLRALVVRTSMNSLRDPAVYALR 411          
BLAST of mRNA_P-littoralis_Contig1267.3.5 vs. uniprot
Match: A0A7S0QS61_9CHLO (Hypothetical protein n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0QS61_9CHLO)

HSP 1 Score: 444 bits (1143), Expect = 4.540e-145
Identity = 253/599 (42.24%), Postives = 370/599 (61.77%), Query Frame = 1
Query:   16 FRNIRFSVEVSKAKAFVMGEKAGVKKILKGVSGAVRSGQILAIVGASGAGKTSLLDVLVGKIKD-GTKGLSVTGDITVNGEIMSRAFFLENAAYVPQEDRLWSALTVRENLTFASRMYDPVMSETQCKKRVDEIVASLGLESCQHTKVGNVFLKGISGGQKRRTSIGAELVVQRK-IVFLDEPTSGLDAASASEIMALLRRVASETGMIIITSVHQPSTRVFNSFDQVILLTMGQTAYFGPAVDSLDHF-AKLGHTPVGLVNPADYLLEITNSDFSDAKLVQQLADAWFKTAACETLNERLESTYPAPILPGRKPGCLSYFRQLRALIARATLNSIRDPATYSLRLVLYLCFSFFLGSVYFQVENTQSDILDRVFLIIWINAFNSFMNMAAIPVFTLEKEAVVKEVENGQYGVASYCIANSFVQIPFVLLIALCCATPVFFITSMNDDIVRYGQFIVAMFLMLLVIESLTQIVGVVLQNFVLGIAVFASILSMFFVFNGFFIIPNNIPSFWIWIYWISPLRYSWEMMAKIVFDGKTFSGFNDCLT-----CYGETGEQVLDSLSVGGGTNLNDVSLIGHSGILVGLTVVWRLVHYVVLK 1788
            F N+ F ++V+K   F+ G K GV++IL+ VSG V SGQ++AI+G SGAGKT+LLD L  +        ++V+G + V+GE MS+ FF E  AY+PQ+D L +ALT +E+L +++R+Y     E +        +  LGL  C    VG+VF++G+SGGQKRR S+  EL+   K I FLDEPTSGLDAA+A+EIM ++ + A +  ++++ SVHQPS+RVF +FDQ+++L+ G+TA+ G A D+L++   K G  P   +NPAD+++E+ N+DF+D K V  + D W   AAC + N+   ST  +P         L   R L AL +R     IRDPA Y+ R +LY   S FLG  Y+Q+   Q D++DR+F I+W+ AF S+M+M A+P F LEK  +VKE+ NG Y +  Y + NS +QIP  L++A+   T  F+I  +N +  RY  F+  M   L V+ES+  ++  V+ NFVLG+  F S LSM FVFNGFF+   NIP F IW+Y+IS   Y+   + KIVFD    SG++ CL      CYGE+G  VL ++S     + N+ +      +LV + V  R   ++ L+
Sbjct:   43 FDNLTFDIKVTKLGTFLHGGKVGVRRILQDVSGRVASGQVMAIIGPSGAGKTTLLDTLASQPHVVNNNNITVSGVVAVDGEKMSKDFFSERCAYLPQQDALCTALTTKEHLAYSARLYGVASDELE--SNCTTTMKDLGLTGCADVMVGSVFIRGLSGGQKRRLSLACELIAGNKAIYFLDEPTSGLDAAAATEIMKVVTQAAKQRNVVMVASVHQPSSRVFYAFDQLLVLSKGRTAFCGQAADALEYLDTKCGLRPAMAMNPADFVVEVVNADFADPKQVDAILDKW---AACSS-NQLAPSTPKSPKKGSHGRSWLVPSRSL-ALTSRTLRLYIRDPAVYTFRFMLYTFMSCFLGVTYYQLTYDQRDVMDRMFTIVWVVAFFSYMSMVALPSFALEKFLIVKEITNGSYSLGEYVLINSLIQIPLCLMLAILSVTLAFWIPELNPNFDRYISFVAIMAAHLYVVESVAILLAAVIPNFVLGLIFFVSFLSMNFVFNGFFVSVANIPDFLIWLYYISFFSYTNRALFKIVFDDLDMSGYDKCLELSKYPCYGESGHDVLAAIS-SDKLDYNETNAYEMFAVLVAMAVALRTCFFIYLR 633          
BLAST of mRNA_P-littoralis_Contig1267.3.5 vs. uniprot
Match: A0A7S3YAG1_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3YAG1_9EUKA)

HSP 1 Score: 438 bits (1127), Expect = 1.280e-142
Identity = 257/601 (42.76%), Postives = 368/601 (61.23%), Query Frame = 1
Query:   13 RFRNIRFSVEVSK--AKAFVMGEKAGVKKILKGVSGAVRSGQILAIVGASGAGKTSLLDVLVGKIKDGTKGLSVTGDITVNGEIMSRAFFLENAAYVPQEDRLWSALTVRENLTFASRMYDPVMSETQCKKRVDEIVASLGLESCQHTKVGNVFLKGISGGQKRRTSIGAELVVQRKIVFLDEPTSGLDAASASEIMALLRRVASETGMIIITSVHQPSTRVFNSFDQVILLTMGQTAYFGPAVDSLDHFAKLGHTPVGLVNPADYLLEITNSDFSDAKLVQQLADAWFKTAACETLNERLESTYPAPILPGRKPG---CLSYFRQLRALIARATLNSIRDPATYSLRLVLYLCFSFFLGSVYFQV-ENTQSDILDRVFLIIWINAFNSFMNMAAIPVFTLEKEAVVKEVENGQYGVASYCIANSFVQIPFVLLIALCCATPVFFITSMNDDIVRYGQFIVAMFLMLLVIESLTQIVGVVLQNFVLGIAVFASILSMFFVFNGFFIIPNNIPSFWIWIYWISPLRYSWEMMAKIVFDGKTFSGFNDCL-TCYGETGEQVLDSLSVGGGTNLNDVSLIGHSGILVGLTVVWRLVHYVVLKRS 1794
            RF +IR SV V     +    G     K+ILKG+SG+  SG++LAI+GASG+GKT+LLD L  +      G   +G +TVN + M+  FF  + AYV Q+DRLW ALTV ENL  A+++Y P +S  + K R++ I+ + GL+SC+HTKVGNV +KGISGGQ+RR SI  EL+    I+FLDEPTSGLD+ SA+EIM LL ++A    ++I+ S+HQPSTR F +FD  +LL+ G+ AYFGPA  SL +F KLG T    +NPAD+L+EI+N DF+  + V  L   W   A  ET  +  E T         K G     S+F Q+  L +R T + +RDP  Y  R VLY   S   G +Y    E +Q  +LD +F I W  A  S+M    +PVFT E     KE +NG Y   +Y +A+S VQ  FVL  +     P ++I ++NDD  R+ QF +  ++ L  IESL  +   V+ NFV+ + V  S LS FFVFNG F+ P+++P  + WI +ISP RY+ + ++ + F G++FSGF+ C  +C+G+ G+ VLD++   G ++  +V L+   G+L+   VV RL H+ +L+++
Sbjct:   49 RFEDIRVSVSVPSWMPEFATPGVPGQTKQILKGISGSASSGEVLAIIGASGSGKTTLLDQLAHQPL--MSGGEFSGTLTVNEQPMTNKFFKAHCAYVHQDDRLWGALTVYENLENAAKLYSPNISAEERKDRIEMILEATGLQSCKHTKVGNVLIKGISGGQRRRVSIAVELMGSPAILFLDEPTSGLDSKSAAEIMELLNQIAKRLNVLIVCSIHQPSTRTFLAFDLTLLLSKGKVAYFGPAKSSLSYFEKLGFTAPAQMNPADFLIEISNPDFTSPEQVNDLIAKW--DAQYETERKEKEGTGSDTDKVEPKQGSPYASSFFWQVFVLTSRMTKSYVRDPGAYIGRAVLYTTMSTIFGIIYLGAREKSQEHVLDILFAIAWGMATPSYMATMIMPVFTYESATFAKEAKNGMYAPGAYVLASSLVQTIFVLFTSTLSVVPYYWIVNINDDPARFFQFWLLQYVFLYTIESLCIVFASVIPNFVIALGVVVSTLSNFFVFNGLFVTPDSVPWVFRWIEYISPHRYAMQGLSFLAFSGQSFSGFDTCTASCFGDNGDDVLDNIQ--GLSSDTNVGLM--FGVLIAEAVVLRLAHWFILRKA 641          
BLAST of mRNA_P-littoralis_Contig1267.3.5 vs. uniprot
Match: A0A7S2RHB7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RHB7_9STRA)

HSP 1 Score: 437 bits (1125), Expect = 1.040e-141
Identity = 255/615 (41.46%), Postives = 368/615 (59.84%), Query Frame = 1
Query:   16 FRNIRFSVEVSKAKAFVMGEKAGVKKILKGVSGAVRSGQILAIVGASGAGKTSLLDVLVGKIKD-GTKGLSVTGDITVNGEIMSRAFFLENAAYVPQEDRLWSALTVRENLTFASRMYDPVMSETQ-CKKRVDEIVASLGLESCQHTKVGNVFLKGISGGQKRRTSIGAELVVQRK-IVFLDEPTSGLDAASASEIMALLRRVASETGMIIITSVHQPSTRVFNSFDQVILLTMGQTAYFGPAVDSLDHFAKLGHTPVGLVNPADYLLEITNSDFSDAKLVQQLADAWFKTA-------ACETLNERLESTYPAPILPGRKPGCL-----SYFRQLRALIARATLNSIRDPATYSLRLVLYLCFSFFLGSVYFQVENTQSDILDRVFLIIWINAFNSFMNMAAIPVFTLEKEAVVKEVENGQYGVASYCIANSFVQIPFVLLIALCCATPVFFITSMNDDIVRYGQFIVAMFLMLLVIESLTQIVGVVLQNFVLGIAVFASILSMFFVFNGFFIIPNNIPSFWIWIYWISPLRYSWEMMAKIVFDGKTFSGFNDCLT-----CYGETGEQVLDSLSVGGGTNLNDVSLIGHSGILVGLTVVWRLVHYVVLKRSMF 1800
            F++I FSV  +K  A + G + G  +IL G+SG V SG  +AI+G SGAGKT+LL+ L  +      + +++ G +T++GE ++R++F ++ A+VPQ D LW A+T  ENL +A+R+Y     + +     + +I+  LGL SC+  KVGNVFLKG+SGGQKRR S+G ELV  RK I+FLDEPTSGLDAASASEIM L+RR+A    +I+  S+HQPS+ VF +FD+++LL+ G +A+FG A DSL +F  +GH     +NPAD+LLE+ NSDF+D   VQ + DAW   A       A   ++E          +PG     +     S   +   L++RA     RDPA Y LR  +Y   S FLG  Y  V     D+ DR+F I+W+ AF S+M M A+P F+LEK  +VKE+ NG Y +  Y +A + +QIP ++L A   +   ++   +N    R+  ++V     L V+ESL  +V  ++ NFVLG+ VF S LS  FVFNGFFI   N+P + IWIY+ SP  Y+ + + K+ F G    G+  CL      CYG TG QVLDS+S       NDV+      +L+   V  R   Y+ ++++++
Sbjct:   75 FQDITFSVTNTKLGALLTGGQVGTHQILHGISGRVISGMAMAIMGPSGAGKTTLLETLARQPSVVNNENIALGGSVTIDGEQLTRSYFAKHCAFVPQYDALWPAMTAVENLEYAARLYGDFGGDVENMNAAISDIMEELGLSSCKDVKVGNVFLKGLSGGQKRRLSLGCELVSGRKEILFLDEPTSGLDAASASEIMKLIRRIAKIFNLIVCCSIHQPSSHVFFAFDRLLLLSGGHSAFFGQAADSLAYFETIGHKMSRTMNPADFLLEVVNSDFTDKAGVQAVIDAWKHHAKDYAEAPAKSFVDEEQGGAIEVKPVPGPTGDSVVSQGSSPMGRTMLLMSRAFKCYSRDPALYLLRFAMYGFMSVFLGVTYIDVSRDNQDVSDRLFCIMWMIAFFSYMGMVALPAFSLEKTIIVKEITNGSYTLGEYVLAIALIQIPLIVLCATIASIGPYWFPVLNPLFTRWLVYVVIFSAHLYVVESLAILVAGLIPNFVLGLIVFCSALSQMFVFNGFFISVGNMPVYLIWIYYTSPFAYTTQALFKVAFSGLDMLGYQKCLNRAEYPCYGRTGAQVLDSIS-DADLEYNDVNPWHWFLVLIAFAVALRFQFYLAVRKAVY 688          
BLAST of mRNA_P-littoralis_Contig1267.3.5 vs. uniprot
Match: A0A7S4DWD4_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S4DWD4_9EUKA)

HSP 1 Score: 391 bits (1005), Expect = 2.040e-124
Identity = 231/598 (38.63%), Postives = 354/598 (59.20%), Query Frame = 1
Query:   16 FRNIRFSVEV-SKAKAFVM-GEKAGVKKILKGVSGAVRSGQILAIVGASGAGKTSLLDVL-VGKIKDGTKGLSVTGDITVNGEIMSRAFFLENAAYVPQEDRLWSALTVRENLTFASRMYDPVMSETQCKKRVDEIVASLGLESCQHTKVGNVFLKGISGGQKRRTSIGAELVVQRKIVFLDEPTSGLDAASASEIMALLRRVASETGMIIITSVHQPSTRVFNSFDQVILLTMGQTAYFGPAVDSLDHFAKLGHTPVGLVNPADYLLEITNSDFSDAKLVQQLADAW-FKTAACETLNERLESTYPAPILPGRKPGCLSYFRQLRALIARATLNSIRDPATYSLRLVLYLCFSFFLGSVYFQVENTQSDILDRVFLIIWINAFNSFMNMAAIPVFTLEKEAVVKEVENGQYGVASYCIANSFVQIPFVLLIALCCATPVFFITSMNDDIVRYGQFIVAMFLMLLVIESLTQIVGVVLQNFVLGIAVFASILSMFFVFNGFFIIPNNIPSFWIWIYWISPLRYSWEMMAKIVFDGKTFSGFNDCL-TCYGETGEQVLDSLSVGGGTNLNDVSLIGHSGILVGLTVVWRLVHYVVLKRS 1794
            F ++R SV + S   AF   G      +ILKG+ G V SG++LAI+GASG+GKT+LL+ L +  + DG K    +G +TVNG  ++  FF  + A++  +DRLWSALTV EN+ FA+++Y P +S +Q ++RV  I+ + GLESC +TK GN+F+ G+S GQ+RR SI  EL+    I+F+DEPT GLD+ SASEIM +L  +A +  + +I S+H+P+TR F +FD+ ++L+ GQTAYFGP   + D+FA +G       NPAD+ LEITN DF+    V ++   W  +  A +  N     T        R     SY  Q+  ++ R  L+  RDP +Y  R +++   S   G ++  ++  Q  +LD +F + ++ A  S+M    +  F LE + + KEV NG Y   SY IA+S VQ+PFV  I +    P +++T  NDD  R+ QF+  +FL L + ES+       + N +L I    S+LS+ FVFNG F+ P  +     WI ++SP  Y    + KI F G  +SG+  C+  CYGETG++VLD++  G  +++N   +IG   +L+   VV R+ ++++L++ 
Sbjct:   49 FSDVRVSVSIPSWVPAFATPGVPGTTVEILKGIDGEVSSGELLAILGASGSGKTTLLNRLAMMPLMDGGK---FSGSVTVNGLEVTDGFFTRHCAFIHHDDRLWSALTVYENVNFAAKLYCPELSSSQRERRVKRILKATGLESCANTKAGNIFIDGVSTGQRRRLSIAVELMGSPDILFVDEPTHGLDSKSASEIMTVLGSLARDANVAVICSIHKPATRTFMAFDKALILSKGQTAYFGPTRKATDYFADVGFELPPRTNPADFFLEITNPDFAGKAQVNKIISTWQAQQHAGDVENASTVQTEATASASERPSYASSYPWQMCVVMHRLLLSYSRDPGSYIGRGIMFSSMSIIFGIIFLGLQRNQESVLDYLFSMTFMLANASYMTSIVMHTFKLEVDVLAKEVRNGMYAPVSYAIASSLVQMPFVFFITIMATVPSYWLTGYNDDPARFFQFLGMVFLFLYLCESIGLAFASAVSNLLLAIGSVVSLLSVLFVFNGLFVTPEKVTWALRWIRYVSPHYYVMIALGKISFAGTHWSGYQGCMQACYGETGDEVLDAVQ-GMTSSVNFAKVIG---VLLAEIVVLRIFYWLMLRKQ 639          
BLAST of mRNA_P-littoralis_Contig1267.3.5 vs. uniprot
Match: A0A5B8MUR1_9CHLO (ABC transporter n=1 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MUR1_9CHLO)

HSP 1 Score: 389 bits (1000), Expect = 8.000e-124
Identity = 231/576 (40.10%), Postives = 351/576 (60.94%), Query Frame = 1
Query:   88 KKILKGVSGAVRSGQILAIVGASGAGKTSLLDVLVGKIKDGTKGLSVTGDITVNGEIMSRAFFLENAAYVPQEDRLWSALTVRENLTFASRMYDPVMSETQCKKRVDEIVASLGLESCQHTKVGNVFLKGISGGQKRRTSIGAELVVQRKIVFLDEPTSGLDAASASEIMALLRRVASETGMIIITSVHQPSTRVFNSFDQVILLTMGQTAYFGPAVDSLDHF-AKLGHTPVGLVNPADYLLEITNSDFSDAKL-VQQLADAWFKTAACETLNERLESTYPAPILPGRKPGCLSYFRQLRALIARATLNSIRDPATYSLRLVLYLCFSFFLGSVYFQV--ENT--QSDILDRVFLIIWINAFNSFMNMAAIPVFTLEKEAVVKEVENGQYGVASYCIANSFVQIPFVLLIALCCATPVFFITSMNDDIVRYGQFIVAMFLMLLVIESLTQIVGVVLQNFVLGIAVFASILSMFFVFNGFFIIPNNIPSFWIWIYWISPLRYSWEMMAKIVFDGKTFSGFNDC-LTCYGETGEQVLDSLSVGGGTNLNDVSLIGHSGILVGLTVVWRLVHYVVLKRS 1794
            K ++KG++G V+ GQ LAI+GASG+GKT+ LD L  ++        V G+I +NG++M+ + F ++ AYV Q+D LW ALTV EN+ +A+R+Y    ++ Q K +V+ ++ ++GL SC+ TKVGN+ L+GISGGQK+R S+  EL+    I+FLDEPTSGLD+ASA+ IM LL  +A++    I+ S+HQP +R+F SFDQ++LL+ G  AYFGPA  +  +F  +       L NPAD+L+E+TNSDF D++  V++L   W ++   + L E   S     +  G+    L   +QL  L++R  +  +RDP  Y  R+ LYL  SFF G  YF +  +N   QSDI +R+FL  W+ AF S+M MAA PV++L+   + +E  N  Y  AS   + S   +PFVL+++    TPV++I  +N    RY   ++  F+ L  +E+L  ++GV++ NF+  IAV AS +SM+FV NG F+  N+I     WI+++SP +Y+WE  A + F G   +        CYGE G+   D+L+V  G  ++DV       + +G  +  R   Y +LKR 
Sbjct:   47 KWLVKGITGYVKFGQTLAIIGASGSGKTTTLDALALRMST-----PVEGEIKINGQVMTESLFHKHCAYVMQDDFLWPALTVSENMQYAARLYLGESAD-QVKGKVESLIKAVGLSSCKDTKVGNLLLRGISGGQKKRLSLAIELLKSPLILFLDEPTSGLDSASAAAIMDLLDSIATKFNKAIVCSIHQPQSRIFLSFDQIMLLSQGSIAYFGPAKSACAYFETQFDLKCPSLCNPADFLMEVTNSDFRDSREEVEKLVSEWSQSNEAKELLEVANSLGSKELESGKGHKNLRLSQQLPVLLSRTFIGYLRDPTAYLPRVALYLNMSFFFGLCYFNIGWQNPLKQSDIFNRMFLWNWVTAFMSYMAMAAAPVYSLDAGTINRERMNNMYHPASLMASISICHLPFVLMLSFLSITPVYWIVGLNPKFDRYLAQVLVFFVHLYWVETLAFMLGVLINNFIAAIAVMASFISMYFVLNGLFLETNSITWAVRWIHYLSPFKYTWESQAWLEFSGTNLTACKPGDAVCYGERGD---DALAVVNG--MDDVKWGLWLLVNLGFIIALRFAAYQILKRK 611          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1267.3.5 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G2U6_ECTSI7.590e-30066.62ABC transporter domain-containing protein n=1 Tax=... [more]
A0A6H5JKZ7_9PHAE1.050e-27866.51ABC protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0... [more]
A0A6H5JKJ8_9PHAE1.600e-24460.53ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
D7G2W0_ECTSI9.660e-21673.55ATP transporter, putative MET type n=1 Tax=Ectocar... [more]
D7G3K1_ECTSI2.230e-17273.78ATP-binding cassette superfamily n=1 Tax=Ectocarpu... [more]
A0A7S0QS61_9CHLO4.540e-14542.24Hypothetical protein n=1 Tax=Pyramimonas obovata T... [more]
A0A7S3YAG1_9EUKA1.280e-14242.76Hypothetical protein n=1 Tax=Lotharella globosa Ta... [more]
A0A7S2RHB7_9STRA1.040e-14141.46Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S4DWD4_9EUKA2.040e-12438.63Hypothetical protein n=1 Tax=Lotharella globosa Ta... [more]
A0A5B8MUR1_9CHLO8.000e-12440.10ABC transporter n=1 Tax=Chloropicon primus TaxID=1... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1267contigP-littoralis_Contig1267:15401..23138 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7G2W1
PFAMsABC2_membrane,ABC_tran
Model size1942
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons16
Evalue6.59e-292
EggNOG OGsCOG1131@1|root,KOG0061@2759|Eukaryota
DescriptionATPase activity, coupled to transmembrane movement of substances
Cds size1737
COG categoryV
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789559.8689764-UTR-P-littoralis_Contig1267:15400..154661680789559.8689764-UTR-P-littoralis_Contig1267:15400..15466Pylaiella littoralis U1_48UTRP-littoralis_Contig1267 15401..15466 +
1680789560.0525935-UTR-P-littoralis_Contig1267:22999..231381680789560.0525935-UTR-P-littoralis_Contig1267:22999..23138Pylaiella littoralis U1_48UTRP-littoralis_Contig1267 23000..23138 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789559.879576-CDS-P-littoralis_Contig1267:15466..155981680789559.879576-CDS-P-littoralis_Contig1267:15466..15598Pylaiella littoralis U1_48CDSP-littoralis_Contig1267 15467..15598 +
1680789559.8886583-CDS-P-littoralis_Contig1267:15986..161191680789559.8886583-CDS-P-littoralis_Contig1267:15986..16119Pylaiella littoralis U1_48CDSP-littoralis_Contig1267 15987..16119 +
1680789559.8979337-CDS-P-littoralis_Contig1267:16416..165381680789559.8979337-CDS-P-littoralis_Contig1267:16416..16538Pylaiella littoralis U1_48CDSP-littoralis_Contig1267 16417..16538 +
1680789559.9125555-CDS-P-littoralis_Contig1267:16890..169871680789559.9125555-CDS-P-littoralis_Contig1267:16890..16987Pylaiella littoralis U1_48CDSP-littoralis_Contig1267 16891..16987 +
1680789559.924457-CDS-P-littoralis_Contig1267:17278..174181680789559.924457-CDS-P-littoralis_Contig1267:17278..17418Pylaiella littoralis U1_48CDSP-littoralis_Contig1267 17279..17418 +
1680789559.9326286-CDS-P-littoralis_Contig1267:17650..177731680789559.9326286-CDS-P-littoralis_Contig1267:17650..17773Pylaiella littoralis U1_48CDSP-littoralis_Contig1267 17651..17773 +
1680789559.941458-CDS-P-littoralis_Contig1267:18185..184121680789559.941458-CDS-P-littoralis_Contig1267:18185..18412Pylaiella littoralis U1_48CDSP-littoralis_Contig1267 18186..18412 +
1680789559.9562693-CDS-P-littoralis_Contig1267:19004..190461680789559.9562693-CDS-P-littoralis_Contig1267:19004..19046Pylaiella littoralis U1_48CDSP-littoralis_Contig1267 19005..19046 +
1680789559.969033-CDS-P-littoralis_Contig1267:19571..196511680789559.969033-CDS-P-littoralis_Contig1267:19571..19651Pylaiella littoralis U1_48CDSP-littoralis_Contig1267 19572..19651 +
1680789559.9781265-CDS-P-littoralis_Contig1267:19861..199261680789559.9781265-CDS-P-littoralis_Contig1267:19861..19926Pylaiella littoralis U1_48CDSP-littoralis_Contig1267 19862..19926 +
1680789559.9880302-CDS-P-littoralis_Contig1267:20490..206211680789559.9880302-CDS-P-littoralis_Contig1267:20490..20621Pylaiella littoralis U1_48CDSP-littoralis_Contig1267 20491..20621 +
1680789559.996377-CDS-P-littoralis_Contig1267:21105..211871680789559.996377-CDS-P-littoralis_Contig1267:21105..21187Pylaiella littoralis U1_48CDSP-littoralis_Contig1267 21106..21187 +
1680789560.007117-CDS-P-littoralis_Contig1267:21436..214981680789560.007117-CDS-P-littoralis_Contig1267:21436..21498Pylaiella littoralis U1_48CDSP-littoralis_Contig1267 21437..21498 +
1680789560.019564-CDS-P-littoralis_Contig1267:21838..219041680789560.019564-CDS-P-littoralis_Contig1267:21838..21904Pylaiella littoralis U1_48CDSP-littoralis_Contig1267 21839..21904 +
1680789560.028128-CDS-P-littoralis_Contig1267:22535..226321680789560.028128-CDS-P-littoralis_Contig1267:22535..22632Pylaiella littoralis U1_48CDSP-littoralis_Contig1267 22536..22632 +
1680789560.0369585-CDS-P-littoralis_Contig1267:22861..229991680789560.0369585-CDS-P-littoralis_Contig1267:22861..22999Pylaiella littoralis U1_48CDSP-littoralis_Contig1267 22862..22999 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1267.3.5prot_P-littoralis_Contig1267.3.5Pylaiella littoralis U1_48polypeptideP-littoralis_Contig1267 15467..22999 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig1267.3.5

>prot_P-littoralis_Contig1267.3.5 ID=prot_P-littoralis_Contig1267.3.5|Name=mRNA_P-littoralis_Contig1267.3.5|organism=Pylaiella littoralis U1_48|type=polypeptide|length=579bp
MGEKAGVKKILKGVSGAVRSGQILAIVGASGAGKTSLLDVLVGKIKDGTK
GLSVTGDITVNGEIMSRAFFLENAAYVPQEDRLWSALTVRENLTFASRMY
DPVMSETQCKKRVDEIVASLGLESCQHTKVGNVFLKGISGGQKRRTSIGA
ELVVQRKIVFLDEPTSGLDAASASEIMALLRRVASETGMIIITSVHQPST
RVFNSFDQVILLTMGQTAYFGPAVDSLDHFAKLGHTPVGLVNPADYLLEI
TNSDFSDAKLVQQLADAWFKTAACETLNERLESTYPAPILPGRKPGCLSY
FRQLRALIARATLNSIRDPATYSLRLVLYLCFSFFLGSVYFQVENTQSDI
LDRVFLIIWINAFNSFMNMAAIPVFTLEKEAVVKEVENGQYGVASYCIAN
SFVQIPFVLLIALCCATPVFFITSMNDDIVRYGQFIVAMFLMLLVIESLT
QIVGVVLQNFVLGIAVFASILSMFFVFNGFFIIPNNIPSFWIWIYWISPL
RYSWEMMAKIVFDGKTFSGFNDCLTCYGETGEQVLDSLSVGGGTNLNDVS
LIGHSGILVGLTVVWRLVHYVVLKRSMF*
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mRNA from alignment at P-littoralis_Contig1267:15401..23138+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig1267.3.5 ID=mRNA_P-littoralis_Contig1267.3.5|Name=mRNA_P-littoralis_Contig1267.3.5|organism=Pylaiella littoralis U1_48|type=mRNA|length=7738bp|location=Sequence derived from alignment at P-littoralis_Contig1267:15401..23138+ (Pylaiella littoralis U1_48)
CAGGTCGATTTTCGCTTTCGCAACATCCGCTTCAGCGTCGAGGTTTCCAA GGCGAAGGCCTTTGTCATGGGCGAGAAGGCTGGGGTGAAGAAGATCCTCA AGGGAGTCAGCGGAGCGGTCAGATCTGGGCAGATTCTCGCCATCGTCGGG GCATCCGGGGCGGGGAAGACGTCTCTGCTCGACGTGTTGGTTGGAAAGGT GAGAAGATCTGTGCGGAGTCATATCGCTTCATCCTGGATGTCTTTCTCGC CGTGCAATTATCTGCACTGCATAGTTGACTCGTTAATGAGCGTGACTCGA CCATACCACCGCAGCTTGTCCGATGAACCGAAATGACAGTAAGAACGGCG TTGAGACGAGGCTTGGCTGCCGAAAGGGTTGTGCGTAGTGAATGAGGCGT TGGTACACAAAGGCGCTGTGATTGAGGTGCAACACGACAGAGGTTACACC AACTGGGGCGGAGGTGACCCTGATGCACGCTTCTGAGTAGATTGATGATC GCTCCGTCGCCGGCCAATCGGAAAGTCCACACTGGAAATGGTCGCTGCGA CCCTCAGCATCTGCTTGCCACTTGTCGCCCTCTTAGATTAAGGACGGGAC TAAGGGTTTGAGCGTGACGGGCGATATCACGGTCAACGGCGAGATCATGT CCCGCGCTTTCTTCCTGGAGAACGCCGCCTACGTGCCGCAGGAGGACCGC TTGTGGAGTGCTTTGACCGGTACGTCAGTGCGGTCATGTCGTAACGATTC GGCTCGAGCTCCTTAGAAGCGCTTTCAACACGCTGCATTAACGCCGTGCC ATCACAAGAGGGTCCCTTGCGATGCGCTTCTGACAGGTGGGTATGGACAT GCAGGCGCGACCTCCGGTGTACATGACCAACTTTCGAGTCCACGCGTTTC CAGCCAAGACCTAGGGTAACTGCATGTCCTTGACGATATGATGAGCCGTT TTGAAAGGGATGCACGCGTGCCGTCGAATGCTTCCCGCCAATCTCCCCTC TTCTCGTTTCCTCCAGTTCGCGAGAATCTGACGTTCGCGAGCAGGATGTA CGACCCAGTAATGTCAGAGACGCAGTGCAAAAAACGCGTTGACGAGATCG TGGCGAGTTTGGGCCTGGAGAGCTGCCAACACACCAAGGTGAGGCAAGGT AACGAAGGAGGCTGACTCGTCGGGTCTGAGAAGCCTACCGAATACTTTTA CGGATGAGCATAAAGCCGTCCATAGCCGAATGACACGTCTTACGGACACC CCTTTTGATGATGTCCTTCCAAGAACACCTTTTCAGGCATTAGCAACCCC TGCAGAGTATCAAGTGGAAGTGTTAGACACCGCAGGACTAAAAATGATAA AGCAGTGCTTTGAAAATAGTGTAGGGAGGGAAGAGTCAATGTCCGTTCCA ACCCCATCCTTTCCTTCCTTTCTGCCTTTCCGCCCTCTCCATAACACGTC CGGTTGTACCGCTGCTGCTCCTTTGCGGCCAAACAACAAGGTCGGTAATG TTTTCCTGAAAGGCATCTCGGGGGGCCAGAAGCGGCGCACGTCGATCGGC GCGGAGCTCGTCGTTCAGCGCAAAATCGTCTTCCTAGGTACGGTACGGTG GATGCACCTACACCACGCCATTCTCGGCGACGGGTAGGAAACATTGGAGA GGCGACAGACCCGGTTGACCCCACGCAATTTGCAGTGTGCACTTTTCCGC CCTCCACCGTAGATCGATCCCGGCAGAAAGACAACTGCGGGAGGGGGGTG GTTTTGTCGAGGCTTTCTTCGGCACGGCAGGCGTGTTTTTACCGACCAGC CGGGGAGCACGGTTTGTGCCAATCAGAGAACCCTTCCTCCGTTTGCGGTC GTTTAATTTTCCGACAAAAAATCAAAAGATGAGCCGACGTCTGGACTTGA CGCCGCTTCGGCTTCGGAGATCATGGCCCTCCTACGGCGTGTGGCTTCAG AGACGGGCATGATCATCATCACGAGCGTGCACCAGCCGTCGACCCGCGTG TTTAACAGCTTCGACCAGGTATTGGTTTGGGGGGTCTTGTTCAGCTTAGC ATTGTGAGTATCTGTTGTTGTTCAGCTGAGCTCGGCGTTTGCCTCGTTTC GGGGAGTCACAGGTTCTTCCTCTCTCTTTCTTCCCTTCCGTTGTCACTGT CGGTCATTTCTCTCTCTTATCTGTTTTCTCTCAATTCCCTTTGACTGCAA CACCACGCATGAAACACGGTGTCTGCACCCTGCTTCTCCATATGATATAG GTCATCTTACTGACGATGGGTCAGACGGCGTACTTCGGTCCCGCCGTCGA TAGCCTGGATCACTTCGCGAAATTGGGCCACACGCCTGTTGGCCTGGTCA ACCCCGCAGACTACCTCCTCGAGGTGTGCACTATATTCGCATTAACTGTT GGATCAGTGATGGCGGCATGTTGCGTATCGAAGTTTTACTGTCACCTTTC ATTGGCGCCGATGTGTTCGTTTAGGCTTGTGTTGATAGACAATACGATGC TCGTCATTTTTTTAACGCTTGCGCAACTTCGTCGTCAGAGCACCCCCTCC ACGCTCGCCCCATTCACCTTTACCACATTGTGCGCAATAACCCGGTTGGA TCACACCGGCGGTGTCATACCTCGTACACAGCACATTGCACACAGTTTGC CCCTTACAGTCCCGAACCCCTAAGCTAGGAATCGCAAATACCATCGGTCT GTCAAATCCTAACGAGGGCAAACCAGGACATTGGAACGAGACACATGCTG TGCCCCCCCCTTCCTCCTGTCCCTTACCCCACAAGATCACCAACTCGGAT TTCAGCGACGCCAAATTAGTCCAACAGCTGGCCGACGCATGGTTTAAGAC GGCAGCGTGCGAGACCCTCAACGAGCGCCTCGAATCCACCTATCCAGCGC CAATCCTGCCCGGGCGTAAGCCGGGATGCCTGTCGTACTTTCGTCAGCTC CGAGCGCTCATCGCCAGGGCAACGCTCAACAGCATCAGAGACCCTGCTAC ATATTCCTTGAGGTATATATAAATCGTTTGTTGTCCTCGATGTTTTTGCC ACACGTTTGGTTCTGGTAATCGAGATTATTTCTTTGAAGGTTTCGTCTTT GTGTAGCGTGTTGGTGTGATCACGTTGTACCTGGTCCGTTGCCCTGTATC GGCTGGTTCACCGTAGTGGATATGACTGCACTTCTCGCTTGTTTTCAGAC CGGCAGCCAAGCGGGGCGACGTCATGATGTGTGGCCGGTGAAAATGGCTC GTGGTGTGTAGTGTTGCACTGCCGGCCGTACCGGCGCAGTTTATGCTGCT GTTTCTGCTTTGCTCTGGCGAAGACGTGACCGGTTTCAACACCCTGTATG CGCCGCAAAACTCCTCAACAACCACACTTGTCGTCAGAACATTGTCTTCA AGGCGTCGGTACATTAGACTTGAAATAATTACAAGTTTTTCGGTTGTACG CACTGCCCCCCAGTCTCTCGCTCCATAAACGCCGCCCGCCTGCCTGTCAT CGCCTCCTCTACCGTCCTCTGCAGTCATGTATATCGCCCGCCACTTGTGC CGTCTTTCTTGACACCCTCTCCTCATCTCCGTTCGCCATATTCTCTACTC GAAGGCTGGTGCTGTATCTGTGCTTCAGCTTCTTCTTGGGCAGCGTGTAA GTTATGCCATGACTGCCACGTTTCAAGAACGTAAGCGAATTATATTTTGC GACGCGTTTTTTGGTGAGTCGTGTTGATGCGTCTACAGGCAGAACATAAT AGTTGGTGGTGCTATAGCTACCGGTGGGTCCATTAGCCTTACGGACTTAT ACGTGCGCATCGTCGAAGGAGGGGAAAAGACAGAAATCATGAGTACAGCA GTAGCATGATCCTGTCAGTATTCTGCTATTTGACGCTTGTCATTCCTCTG CACCACCCCAGTTACTCTTTTCGGTCATTTCCTGCTTCATCCGGGCAAAG AGTGTATCGCGAATTTATACGTGTATTCTCGTCCAATACGCCTTCTTAGT TGGTGAACCTCCCCGACGCTGCTGCACCTTGACAACAAAAATTACCGCAG CACCGCGTGCAACGTGCTCTGTAAACGAAGCAACTGGTTGATTTATTTAC CATTTTCCCATCCACTCTCTTTCTGTACATACGCCACTCCCCCGCACATT CTCCTTCTGCGGCAAGAGCAGGTACTTCCAGGTCGAGAATACGCAGTCTG ACATCCTTGACCGGGTGTTCCTCATAATCTGGATCAACGCCTTCAACTCA TGTAAGACACGACGCCTCCCGCTGATCATGGTACGGGGAGAGCGCCTTCT TCTCTTGATTGTTCTGCTTGTTTGAGCTCGTAGAGAGCGTCGCCTAGAGT TTGCCAAAGAATGACGAGCCCCCCTCCGCTTTCGAGGAAATCCCCCATTT ATACATCCCTGTGTAGAACCGCGCTTGAAACTCTGCTTTGATGTCCGTTC AAATAATCCAGTCATGAACATGGCGGCCATTCCGGTTTTCACGCTTGAGA AGGAGGCTGTGGTGAAAGAAGTCGAGGTGAGAGATCATTTGCGGCTAGGA GCCATTCCCTTGGAGAGAGCTCTCGCTGGAAAGAAAACGAAAGAGCGAGA CAGAATAGTTGTCGCCGTCGGGGGCGGGCACTGCTTATTGAAGCCAAAGC AAGCCGTGGCCGCGAAGCCACAGTTACTCAAGAAAATCGTGATGCTTGGT GCAATGTACCGTACGGCAGGAAGAGAGCAACTCCATAGCGATCTTTGCCG TAGTATTGCTGTGTGCGGGCATGCAGAGATGTGGAGTGTAGGGCGTGAGC GTGCAGTAGTTGTTTTTCTAACACGGGGTCTCCTGCAACACCTTGCTCGA CAAAACATACGAAATGCCTGTAGATATTGTGGACCTGGGAACATTTCGGT GTGCCCTTTGTTTTCACGTCAGGGATATAATTGTGCGAAATTCCTCTCAC CCACGCACCTTCTCAATCCGCTTCCGCTCCTACTGTACCACCAAGGCACT CCCTACCAACAGCCGCATCTTGTCATGTGGGCCCAACGTCCCCCTCCCTT CTCCTCCTTTCGCTGTTGACTCCACTCTTATTCGAATCAGAACGGTCAAT ACGGCGTGGCAAGCTATTGCATCGCCAACAGCTTCGTTCAGATACCCTTC GTGTTATTGATCGCCCTGTGCTGCGCCACCCCGGTGTTTTTCATCACGAG CATGAACGACGACATTGTTAGGTGAGGATGGGTGTTGCCATCTGTAGACG AATCGCAAGGATTTTCACCGCGATCAGTCTGCATTTTGCGTTGGTGTATC ATAGCCTGGCGCGGAACGAATCGATCTTCGACTCCTCAAGGGGGGGGGGG GTCCACGCTATTTTTAAAGCCTACCAGGTTCCACGCGTTTTTCAGCCTAT ATTGAAGACGCATCGATACGCTCTAATTCCAAGTCTCATTCGTTCTACGG CATTTTCTAAAGATTTGTTCCTAAACGCGAATCCGAGCTGGAAGAGTCGA GCTGCGGGCGTTGCCCGTGAAGCAGACAGGGTAATTGCCCGCAGGTCGAG AGAATACGGAATGGTGTGGATATGATGTAGGGCACGCTTGGTGTGAGGAA GAAATGGCGACATCGAAGGCTTTTCCTTTCTTGTCTCTTCACTGCTTACC TTTTCCTTCTCTCCCTTTTCCCCTCCCAACGTTGACCTGCCGGGGATGTG TTCAGGTACGGTCAGTTCATCGTGGCGATGTTTCTCATGTTGCTCGTCAT CGAGAGCTTAACGCAGATCGTCGGCGTCGTGCTTCAGGTAAAAACGAATA TCACGTACACATCATTGGTGACGAAGGTTATAAACATCAGAATCGGTGGT GGATAGTAGGTGGTTATCGTGACGCACGCAGGGACGACGGTGGCTATGGC TACTGACAGCAACCGACAGCGATCATCGCCTGTATCAACCTCAGTTTCGC CTCGCCTTGTGAAACTTTCTAACCTTACCCCGTCTCCGTCCCGGCGCGTT CACTCTCCCTCCTCCGCTCACCAAATCTTGTTGAAGAATTTCGTCCTGGG GATTGCCGTCTTCGCAAGCATTCTGTCCATGTTCTTTGTCTTCAACGGGT GAGATGGAAAAAGGAGTTACAGGTGCCATTCTCGTCGACAGCTGGTGATA TATATATACGAATTATATATATTGGCCGTTTCTCCGGCCGTTTTCTTTAC GACTGTGGACCATTCCTGAAGCCCCCCATCGGGCAGTCCCTTGGGATTAT CTTGTGCCGTTCCCTTGGGCCGTTTTCGTGGACCCTTCGTGAGGCCCCGC TGTCGGGAGGCTGTATGTTTAACGTAAGAAGAGTGCGTCAGTGAGCTGCA GCATTTGGGGTGGAATAAACAACCATTCGCGATTTCCGTCGTGTAACGTT GCCGGAGTTGACCCGTACTGTTTGCAACGCCCGTCCAGATTTTTCATCAT CCCCAATAACATCCCGAGTTTCTGGATCTGGATCTACTGGATTTCGCCAT TGAGGTGAGATCAAGAGGGCAGCGCCAAAACGGTTCCTCTTCTCCTGCGA TTTTCCAGCCCCCCGAAGAAACTCGTACATACAGTACACTCGATATTTTC TTACCACAGCAGTTGTAGCTCCTAGCGTGCTGTTCCCACCACACAAACGT TCACGGCCAATGAAAGGATGACCAAGCGACCCCGACATGGAGTACATTTC GGACCCCATAACCTCGCTATTGATAAAAGACATGCAAACGGGGTGCCACA TGGACAAAATGAGTTTTAAACACTTTGATTTTTTTGCCAAGCCTCCACAA TAGCTGTCGTCTCTCCAGTTGAATCATACGTATGCCTTTTCTTGCCCAAT GCGTTCGTTCGTTCGGTGTCGTGACGCCTGCCCAGCACCGGAATTTGTTT TCGCCAATTCCTTCACACCGAATTTGTCAACAGCTTGCGCTGTTGACAAG ACCACTCGTTCATCACAGTGTGCAGACAGCAGTGATGGTACTTTTCGATG AGAGACTTTGCACCTGCAACCGTTTCAATCACGTCTGCCGCTCTGCGGAG ATATGTACAGTAGTAGCATCGATGATCACACCCCGCCTTCCCGATAGACG CCTGACTAGGGCGAAATGCAACGTCGGCACGCCAGGTACTCCTGGGAGAT GATGGCGAAGATCGTGTTCGACGGCAAGACTTTCTCGGGGTTCAATGACT GCTTGACCTGCTACGGAGAGACGGGAGAACAGGCAAGTCCCCCCCCCCAC AGAAGGAGCAACTTTCCACCCCAGAGACGAAGACGAGGAGGATGAGATAC ATCCCCCTGTCTCCGGAGTGTTTTCCGTTTGTGATTTTGTAACGACCTCC ACCTACCTATCCGTGGTATACGCTGAAGATGGAGGACAAGAACTCTCGAC CGTCTTCAATCTGTATCGGGCAACTCCCCGGATGACTTGTACTTCGTATG CATCACGCCAGGTGTTGGACTCACTGAGTGTCGGAGGCGGCACGAACCTG AACGACGTCAGCCTCATCGGACATAGTGGGATTTTGGTAGGGCTGACGGT CGTCTGGCGACTGGTGCACTACGTGGTTCTCAAGCGCTCAATGTTCTGAG CTTTTTATTTTGGCGTTTGTGTGCTGGTTGAGCAGGACAGCAGTAGTATT GAGACGTGGTGCGTGGCGAGTTTGTTTTTGTTCTTCGGAACTGCCTTGTA TTCCAGAGTTAAGTATTTTTTTTCAGCCCGAAGGGTGT
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Coding sequence (CDS) from alignment at P-littoralis_Contig1267:15401..23138+

>mRNA_P-littoralis_Contig1267.3.5 ID=mRNA_P-littoralis_Contig1267.3.5|Name=mRNA_P-littoralis_Contig1267.3.5|organism=Pylaiella littoralis U1_48|type=CDS|length=1737bp|location=Sequence derived from alignment at P-littoralis_Contig1267:15401..23138+ (Pylaiella littoralis U1_48)
ATGGGCGAGAAGGCTGGGGTGAAGAAGATCCTCAAGGGAGTCAGCGGAGC
GGTCAGATCTGGGCAGATTCTCGCCATCGTCGGGGCATCCGGGGCGGGGA
AGACGTCTCTGCTCGACGTGTTGGTTGGAAAGATTAAGGACGGGACTAAG
GGTTTGAGCGTGACGGGCGATATCACGGTCAACGGCGAGATCATGTCCCG
CGCTTTCTTCCTGGAGAACGCCGCCTACGTGCCGCAGGAGGACCGCTTGT
GGAGTGCTTTGACCGTTCGCGAGAATCTGACGTTCGCGAGCAGGATGTAC
GACCCAGTAATGTCAGAGACGCAGTGCAAAAAACGCGTTGACGAGATCGT
GGCGAGTTTGGGCCTGGAGAGCTGCCAACACACCAAGGTCGGTAATGTTT
TCCTGAAAGGCATCTCGGGGGGCCAGAAGCGGCGCACGTCGATCGGCGCG
GAGCTCGTCGTTCAGCGCAAAATCGTCTTCCTAGATGAGCCGACGTCTGG
ACTTGACGCCGCTTCGGCTTCGGAGATCATGGCCCTCCTACGGCGTGTGG
CTTCAGAGACGGGCATGATCATCATCACGAGCGTGCACCAGCCGTCGACC
CGCGTGTTTAACAGCTTCGACCAGGTCATCTTACTGACGATGGGTCAGAC
GGCGTACTTCGGTCCCGCCGTCGATAGCCTGGATCACTTCGCGAAATTGG
GCCACACGCCTGTTGGCCTGGTCAACCCCGCAGACTACCTCCTCGAGATC
ACCAACTCGGATTTCAGCGACGCCAAATTAGTCCAACAGCTGGCCGACGC
ATGGTTTAAGACGGCAGCGTGCGAGACCCTCAACGAGCGCCTCGAATCCA
CCTATCCAGCGCCAATCCTGCCCGGGCGTAAGCCGGGATGCCTGTCGTAC
TTTCGTCAGCTCCGAGCGCTCATCGCCAGGGCAACGCTCAACAGCATCAG
AGACCCTGCTACATATTCCTTGAGGCTGGTGCTGTATCTGTGCTTCAGCT
TCTTCTTGGGCAGCGTGTACTTCCAGGTCGAGAATACGCAGTCTGACATC
CTTGACCGGGTGTTCCTCATAATCTGGATCAACGCCTTCAACTCATTCAT
GAACATGGCGGCCATTCCGGTTTTCACGCTTGAGAAGGAGGCTGTGGTGA
AAGAAGTCGAGAACGGTCAATACGGCGTGGCAAGCTATTGCATCGCCAAC
AGCTTCGTTCAGATACCCTTCGTGTTATTGATCGCCCTGTGCTGCGCCAC
CCCGGTGTTTTTCATCACGAGCATGAACGACGACATTGTTAGGTACGGTC
AGTTCATCGTGGCGATGTTTCTCATGTTGCTCGTCATCGAGAGCTTAACG
CAGATCGTCGGCGTCGTGCTTCAGAATTTCGTCCTGGGGATTGCCGTCTT
CGCAAGCATTCTGTCCATGTTCTTTGTCTTCAACGGATTTTTCATCATCC
CCAATAACATCCCGAGTTTCTGGATCTGGATCTACTGGATTTCGCCATTG
AGGTACTCCTGGGAGATGATGGCGAAGATCGTGTTCGACGGCAAGACTTT
CTCGGGGTTCAATGACTGCTTGACCTGCTACGGAGAGACGGGAGAACAGG
TGTTGGACTCACTGAGTGTCGGAGGCGGCACGAACCTGAACGACGTCAGC
CTCATCGGACATAGTGGGATTTTGGTAGGGCTGACGGTCGTCTGGCGACT
GGTGCACTACGTGGTTCTCAAGCGCTCAATGTTCTGA
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