mRNA_P-littoralis_Contig1267.2.1 (mRNA) Pylaiella littoralis U1_48
|
Overview
Homology
BLAST of mRNA_P-littoralis_Contig1267.2.1 vs. uniprot
Match: A0A6H5KVF6_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVF6_9PHAE) HSP 1 Score: 442 bits (1136), Expect = 5.010e-147 Identity = 225/421 (53.44%), Postives = 283/421 (67.22%), Query Frame = 1
Query: 1 LLVDSGASESFLDDELIPDLKSRMLEFKAFSTPREITTAGKHTLHGIGTGIISFTIRDTHGTQLPVNMRALVVPGLDRNIFAPIAELRNGVRFVLEKKT-YLTIDGTVIPLKQDPRDQGMCSLDITFQRDSHGVLGKS----EGVSFDGGTGAVYTATTSASVWHRRLGHMNPRKMEVLRKKKGNGVEYTGTISGCDICSVTKSKQQAHPKESTRKTTRPMQLIYTDLMGPITPAAK---GGHRFVSKFTDDYSRMKEIYLLKNKPEAAESLHQYNMTVAVPLGLRIENLRCDKGGEYTGQEFRTLCVGTGTNIEYTATNTSQQNGVSERDGQILAKIT*CFMKDGDFPPFMWGELMFTATYLSNRSPHSTLEGATLYSKMHNMEPDLTGLRAIGARAFVHRETFTNKLEDRAFEGKLYGY 1239
LLVD+GASE D+ LIPD + ++ ++P+ + AG+ L G TGI+ T++D G QL V ++ L+VPGL RNIF+P + L+ G+R V EK T +LTI G VIPL QDPRDQGMC+LDITF+++ KS + S AV SA WHRRLGH+N R +++LRK G V+Y ++S C +C + K KQ HPK+STR+ +RP QL+ D MGP+ P AK G + K TDDY++MKE+YLL+ K + E++H YNM VA G RIE +RCDKGGE TG EFR C + +EY ATNT QQ GVSERDGQ LA +T C +KDGDFPP MWGELM TA YL NRSPHS L GAT YSK+ N PDL+GLR IGARAFVH E + KL+DRAFEGKL G+
Sbjct: 208 LLVDTGASEPMFDNRLIPD--GNLHDYTQRNSPKIVDVAGERQLKGTATGILHCTVKDNRGQQLRVRIQGLIVPGLGRNIFSPTSLLKRGLRCVGEKSTPHLTIQGKVIPLTQDPRDQGMCTLDITFEQNVQPSGTKSLVPHQKQSQTHTANAVCFTLVSADTWHRRLGHLNARSLDILRKDTGTEVDYRDSLSPCGVCQIAKHKQSPHPKQSTRELSRPGQLVVIDNMGPVNPPAKYKGGSFPYACKVTDDYTKMKEVYLLRKKSDTTEAVHTYNMCVAAAGGYRIETIRCDKGGENTGSEFRDYCKNSAIKLEYAATNTPQQIGVSERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSPHSALGGATPYSKLRNKSPDLSGLRVIGARAFVHHERYRKKLDDRAFEGKLCGF 626
BLAST of mRNA_P-littoralis_Contig1267.2.1 vs. uniprot
Match: A0A6H5K3T5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3T5_9PHAE) HSP 1 Score: 441 bits (1135), Expect = 6.690e-142 Identity = 243/462 (52.60%), Postives = 304/462 (65.80%), Query Frame = 1
Query: 4 LVDSGASESFLDDELIPDLKSRMLEFKAFSTPREITTAGKHTLHGIGTGIISFTIRDTHGTQLPVNMRALVVPGLDRNIFAPIAELRNGVRFVLEKKT-YLTIDG-TVIPLKQDPRDQGMCSLDITFQRDSHGV---------------LGKSEGVSFDGGTGAVYTA--TTSASVWHRRLGHMNPRKMEVLRKKKGNGVEYTGTISGCDICSVTKSKQQAHPKESTRKTTRPMQLIYTDLMGPITPAAKGGHR---FVSKFTDDYSRMKEIYLLKNKPEAAESLHQYNMTVAVPLGLRIENLRCDKGGEYTGQEFRTLCVGTGTNIEYTATNTSQQNGVSERDGQILAKIT*CFMKDGDFPPFMWGELMFTATYLSNRSPHSTLEGATLYSKMHNMEPDLTGLRAIGARAFVHRETFTNKLEDRAFEGKLYGYSHNSKAYRIYNPAKGKVVESRNGTFLET 1323
LVDSGASE+ DD LIP+ R+ E + TP+ I AG+ L G TGI+ TI+D QLPV ++ L+VPGL RNIFAP A L+ G+R VLE KT +LTI G V+PLKQ+ +DQGMC+L ITF+ D K E V D A + + SA +WHRRLGH+NPR ME+LR+ GV+Y G +S CD C +TK K+ PK ++R T+P QL+ D MGPI P AK R +V+K TD ++RM+E+YLL+++ E ++LH YNM VA G RIE LRCDKGGE TG+E R C + +E+ ATNT Q+ GVSERDGQ LA +T ++DGDFP MWGELM TA YL+NR+PH+ L GAT YSKM+N PDL+ LRAIGARAFVH E + KL+DRAFEGKL GY +SK YRIY K KV ESRN TF+ET
Sbjct: 380 LVDSGASETMFDDRLIPN--GRLEEERP--TPKIIDVAGESQLRGTTTGILHCTIKDDKEQQLPVKLQGLIVPGLGRNIFAPTALLKKGLRCVLEDKTPHLTIGGEVVVPLKQETQDQGMCTLAITFKGDPASTSKTPPNNQEPGRKPKFRKPEAVQIDHTPHATCSVAMSVSADLWHRRLGHINPRAMEILRRNPATGVKYDGPVSPCDNCQITKHKKAPVPKNTSRVLTKPGQLVQFDNMGPIDPPAKYNGRTYSYVAKATDVFTRMREVYLLRDRTETTQALHAYNMQVASE-GYRIEVLRCDKGGENTGEEMRNYCRESAIKLEFAATNTPQEIGVSERDGQTLAAVTRALLRDGDFPKHMWGELMMTAAYLTNRTPHAALGGATPYSKMYNTTPDLSRLRAIGARAFVHHERYKKKLDDRAFEGKLCGYGPDSKTYRIYVEGKDKVYESRNVTFIET 836
BLAST of mRNA_P-littoralis_Contig1267.2.1 vs. uniprot
Match: A0A6H5K8D4_9PHAE (Uncharacterized protein (Fragment) n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8D4_9PHAE) HSP 1 Score: 439 bits (1129), Expect = 8.070e-142 Identity = 241/447 (53.91%), Postives = 301/447 (67.34%), Query Frame = 1
Query: 4 LVDSGASESFLDDELIPDLKSRMLEFKAFSTPREITTAGKHTLHGIGTGIISFTIRDTHGTQLPVNMRALVVPGLDRNIFAPIAELRNGVRFVLEKKT-YLTIDG-TVIPLKQDPRDQGMCSLDITFQRDSHGVLGKSEGVSFDGGTGAVYTA--TTSASVWHRRLGHMNPRKMEVLRKKKGNGVEYTGTISGCDICSVTKSKQQAHPKESTRKTTRPMQLIYTDLMGPITPAAKGGHR---FVSKFTDDYSRMKEIYLLKNKPEAAESLHQYNMTVAVPLGLRIENLRCDKGGEYTGQEFRTLCVGTGTNIEYTATNTSQQNGVSERDGQILAKIT*CFMKDGDFPPFMWGELMFTATYLSNRSPHSTLEGATLYSKMHNMEPDLTGLRAIGARAFVHRETFTNKLEDRAFEGKLYGYSHNSKAYRIYNPAKGKVVESRNGTFLET 1323
LVDSGASE+ DD LIP+ R+ E + TP+ I AG+ L G TGI+ TI D QLPV ++ L+VPGL RNIFAP A L+ G+R VLE KT +LTI G V+PLKQ+ +DQGMC+L IT Q GK E V D A +A + SA +WHRRLGH+NPR ME+LR+ GV+Y G +S CD C +TK K+ PK+++R T+P QL+ D MGPI P AK R +V+K TD ++RM+E+YLL+++ E ++LH YNM VA G RIE LRCDKGGE T +E R C + +E+ ATNT Q+ GVSERDGQ LA +T ++DGDFP MWGE M TA L+NR+PH+ L GAT YSKM+N PDL+ LRAIGARAFVH E + KL+DRAFEGKL GY +SK YRIY K KV ESRN TF+ET
Sbjct: 499 LVDSGASETMFDDRLIPN--GRLEEERP--TPKIIDVAGESQLRGTTTGILHCTIEDDKEQQLPVKLQGLIVPGLGRNIFAPTALLKKGLRCVLEDKTPHLTIGGEVVVPLKQETQDQGMCTLTITAQT----KFGKPEAVQIDHTLHATCSAAMSVSADLWHRRLGHINPRAMEILRRNPATGVKYDGPVSPCDNCQITKHKKAPVPKKTSRVLTKPGQLVQFDNMGPIDPPAKYNGRTYSYVAKATDVFTRMREVYLLRDRTETTQALHAYNMQVASE-GYRIEVLRCDKGGENTREEMRNYCRESAIKLEFAATNTPQEIGVSERDGQTLAAVTRALLRDGDFPKHMWGERMMTAACLTNRTPHAALGGATPYSKMYNTTPDLSRLRAIGARAFVHHERYKKKLDDRAFEGKLCGYGPDSKTYRIYVEGKDKVYESRNVTFIET 936
BLAST of mRNA_P-littoralis_Contig1267.2.1 vs. uniprot
Match: A0A6H5L1Z9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1Z9_9PHAE) HSP 1 Score: 441 bits (1134), Expect = 1.070e-141 Identity = 242/462 (52.38%), Postives = 304/462 (65.80%), Query Frame = 1
Query: 4 LVDSGASESFLDDELIPDLKSRMLEFKAFSTPREITTAGKHTLHGIGTGIISFTIRDTHGTQLPVNMRALVVPGLDRNIFAPIAELRNGVRFVLEKKT-YLTIDG-TVIPLKQDPRDQGMCSLDITFQRDSHGV---------------LGKSEGVSFDGGTGAVYTA--TTSASVWHRRLGHMNPRKMEVLRKKKGNGVEYTGTISGCDICSVTKSKQQAHPKESTRKTTRPMQLIYTDLMGPITPAAKGGHR---FVSKFTDDYSRMKEIYLLKNKPEAAESLHQYNMTVAVPLGLRIENLRCDKGGEYTGQEFRTLCVGTGTNIEYTATNTSQQNGVSERDGQILAKIT*CFMKDGDFPPFMWGELMFTATYLSNRSPHSTLEGATLYSKMHNMEPDLTGLRAIGARAFVHRETFTNKLEDRAFEGKLYGYSHNSKAYRIYNPAKGKVVESRNGTFLET 1323
LVDSGASE+ D+ LIP+ R+ E + TP+ I AG+ L G TGI+ TI+D QLPV ++ L+VPGL RNIFAP A L+ G+R VLE KT +LTI G V+PLKQ+ +DQGMC+L ITF+ D GK E V D A + + SA +WHRRLGH+NPR ME+LR+ GV+Y G +S CD C +TK K+ PK+++R T+P QL+ D MGPI P AK R +V+K TD ++RM+E+YLL+++ E ++LH YNM VA G RIE LRCDKGGE TG+E R C + +E+ ATNT Q+ GVSERDGQ LA +T ++DGDFP MWGELM TA YL+NR+PH+ L GAT YSKM+N PDL+ LRAIGARAFVH E + KL+DR FEGKL GY SK YRIY K KV ESRN TF+ET
Sbjct: 380 LVDSGASETMFDNRLIPN--GRLEEERP--TPKIIDVAGESQLRGTTTGILHCTIKDDKEQQLPVKLQGLIVPGLGRNIFAPTALLKKGLRCVLEDKTPHLTIGGEVVVPLKQETQDQGMCTLAITFKGDPASTSKTPPNNQEPGRKPKFGKPEAVQIDHTPHATCSVAMSVSADLWHRRLGHINPRAMEILRRNPATGVKYDGPVSPCDNCQITKHKKAPVPKKTSRVLTKPGQLVQFDNMGPIDPPAKYNGRTYSYVAKATDVFTRMREVYLLRDRTETTQALHAYNMQVASE-GYRIEVLRCDKGGENTGEEMRNYCRESAIKLEFAATNTPQEIGVSERDGQTLAAVTRALLRDGDFPKHMWGELMMTAAYLTNRTPHAALGGATPYSKMYNTTPDLSRLRAIGARAFVHHERYKKKLDDRTFEGKLCGYGPGSKTYRIYVEGKDKVYESRNVTFIET 836
BLAST of mRNA_P-littoralis_Contig1267.2.1 vs. uniprot
Match: A0A6H5JL01_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL01_9PHAE) HSP 1 Score: 436 bits (1120), Expect = 6.880e-141 Identity = 240/462 (51.95%), Postives = 301/462 (65.15%), Query Frame = 1
Query: 4 LVDSGASESFLDDELIPDLKSRMLEFKAFSTPREITTAGKHTLHGIGTGIISFTIRDTHGTQLPVNMRALVVPGLDRNIFAPIAELRNGVRFVLEKKT-YLTIDG-TVIPLKQDPRDQGMCSLDITFQRDSHGV---------------LGKSEGVSFDGGTGAVYTA--TTSASVWHRRLGHMNPRKMEVLRKKKGNGVEYTGTISGCDICSVTKSKQQAHPKESTRKTTRPMQLIYTDLMGPITPAAKGGHR---FVSKFTDDYSRMKEIYLLKNKPEAAESLHQYNMTVAVPLGLRIENLRCDKGGEYTGQEFRTLCVGTGTNIEYTATNTSQQNGVSERDGQILAKIT*CFMKDGDFPPFMWGELMFTATYLSNRSPHSTLEGATLYSKMHNMEPDLTGLRAIGARAFVHRETFTNKLEDRAFEGKLYGYSHNSKAYRIYNPAKGKVVESRNGTFLET 1323
LVDSGASE+ DD LIP+ R+ E + TP+ I AG+ L G TGI+ TI D QLPV ++ L+VPGL RNIFAP A L+ G+R VLE K +LTI G V+PLK + +DQGMC+L ITF+ D GK E V D A + + SA +WHRRLGH+NP ME+LR+ GV+Y G +S CD C +TK K+ PK+++R T+P QL+ D MGPI P AK R +V+K TD ++RM+E+YLL+++ E ++LH YNM VA G RIE LRCDKGGE TG+E R C + +E+ TNT Q+ GVSERDGQ LA +T ++DGDFP MWGELM TA YL+NR+PH+ L GAT YSKM+N PDL+ LRAIGARAFVH E + KL+DRAFEGKL GY +SK YRIY K KV ESRN TF+ET
Sbjct: 64 LVDSGASETMFDDRLIPN--GRLEEERP--TPKIIDVAGESQLRGTTTGILHCTIEDDKEQQLPVKLQGLIVPGLGRNIFAPTALLKKGLRCVLEYKAPHLTIGGEVVVPLKPESQDQGMCTLAITFKGDPASTSKTPPNNQEPGRKPKFGKPEAVQIDHTPHATCSVAMSVSADLWHRRLGHINPSAMEILRRNPATGVKYDGPVSPCDNCQITKHKKAPVPKKTSRVLTKPGQLVQFDNMGPIDPPAKYNGRTYSYVAKATDVFTRMREVYLLRDRTETTQALHAYNMQVASE-GYRIEVLRCDKGGENTGEEMRNYCRESAIKLEFAVTNTPQEIGVSERDGQTLAAVTRALLRDGDFPKHMWGELMMTAAYLTNRTPHAALGGATPYSKMYNTTPDLSRLRAIGARAFVHHERYKKKLDDRAFEGKLCGYGPDSKTYRIYVEGKDKVYESRNVTFIET 520
BLAST of mRNA_P-littoralis_Contig1267.2.1 vs. uniprot
Match: A0A6H5KHG5_9PHAE (Uncharacterized protein n=11 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHG5_9PHAE) HSP 1 Score: 441 bits (1134), Expect = 2.580e-138 Identity = 242/462 (52.38%), Postives = 304/462 (65.80%), Query Frame = 1
Query: 4 LVDSGASESFLDDELIPDLKSRMLEFKAFSTPREITTAGKHTLHGIGTGIISFTIRDTHGTQLPVNMRALVVPGLDRNIFAPIAELRNGVRFVLEKKT-YLTIDG-TVIPLKQDPRDQGMCSLDITFQRDSHGV---------------LGKSEGVSFDGGTGAVYTA--TTSASVWHRRLGHMNPRKMEVLRKKKGNGVEYTGTISGCDICSVTKSKQQAHPKESTRKTTRPMQLIYTDLMGPITPAAKGGHR---FVSKFTDDYSRMKEIYLLKNKPEAAESLHQYNMTVAVPLGLRIENLRCDKGGEYTGQEFRTLCVGTGTNIEYTATNTSQQNGVSERDGQILAKIT*CFMKDGDFPPFMWGELMFTATYLSNRSPHSTLEGATLYSKMHNMEPDLTGLRAIGARAFVHRETFTNKLEDRAFEGKLYGYSHNSKAYRIYNPAKGKVVESRNGTFLET 1323
LVDSGASE+ D+ LIP+ R+ E + TP+ I AG+ L G TGI+ TI+D QLPV ++ L+VPGL RNIFAP A L+ G+R VLE KT +LTI G V+PLKQ+ +DQGMC+L ITF+ D GK E V D A + + SA +WHRRLGH+NPR ME+LR+ GV+Y G +S CD C +TK K+ PK+++R T+P QL+ D MGPI P AK R +V+K TD ++RM+E+YLL+++ E ++LH YNM VA G RIE LRCDKGGE TG+E R C + +E+ ATNT Q+ GVSERDGQ LA +T ++DGDFP MWGELM TA YL+NR+PH+ L GAT YSKM+N PDL+ LRAIGARAFVH E + KL+DR FEGKL GY SK YRIY K KV ESRN TF+ET
Sbjct: 380 LVDSGASETMFDNRLIPN--GRLEEERP--TPKIIDVAGESQLRGTTTGILHCTIKDDKEQQLPVKLQGLIVPGLGRNIFAPTALLKKGLRCVLEDKTPHLTIGGEVVVPLKQETQDQGMCTLAITFKGDPASTSKTPPNNQEPGRKPKFGKPEAVQIDHTPHATCSVAMSVSADLWHRRLGHINPRAMEILRRNPATGVKYDGPVSPCDNCQITKHKKAPVPKKTSRVLTKPGQLVQFDNMGPIDPPAKYNGRTYSYVAKATDVFTRMREVYLLRDRTETTQALHAYNMQVASE-GYRIEVLRCDKGGENTGEEMRNYCRESAIKLEFAATNTPQEIGVSERDGQTLAAVTRALLRDGDFPKHMWGELMMTAAYLTNRTPHAALGGATPYSKMYNTTPDLSRLRAIGARAFVHHERYKKKLDDRTFEGKLCGYGPGSKTYRIYVEGKDKVYESRNVTFIET 836
BLAST of mRNA_P-littoralis_Contig1267.2.1 vs. uniprot
Match: A0A6H5KPR8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPR8_9PHAE) HSP 1 Score: 418 bits (1074), Expect = 1.260e-136 Identity = 233/462 (50.43%), Postives = 296/462 (64.07%), Query Frame = 1
Query: 4 LVDSGASESFLDDELIPDLKSRMLEFKAFSTPREITTAGKHTLHGIGTGIISFTIRDTHGTQLPVNMRALVVPGLDRNIFAPIAELRNGVRFVLEKKT-YLTIDG-TVIPLKQDPRDQGMCSLDITFQRDSHGV---------------LGKSEGVSFDGGTGAVYTATTSAS--VWHRRLGHMNPRKMEVLRKKKGNGVEYTGTISGCDICSVTKSKQQAHPKESTRKTTRPMQLIYTDLMGPITPAAKGGHR---FVSKFTDDYSRMKEIYLLKNKPEAAESLHQYNMTVAVPLGLRIENLRCDKGGEYTGQEFRTLCVGTGTNIEYTATNTSQQNGVSERDGQILAKIT*CFMKDGDFPPFMWGELMFTATYLSNRSPHSTLEGATLYSKMHNMEPDLTGLRAIGARAFVHRETFTNKLEDRAFEGKLYGYSHNSKAYRIYNPAKGKVVESRNGTFLET 1323
LVDSGASE+ DD LIP+ R+ E + TP+ I AG+ L G TG++ TI+D QLPV ++ L+VPGL RNIFAP A L+ G+R VLE KT +L I G V+PLK + +DQGMC+L ITF+ D GK E V D A + S S +WHRRLGH+N E+LR+ GV+Y G +S CD C +TK K+ PK+++R T+P QL+ D MGPI P A R +V+K TD +RM+E+YLL+++ E ++LH YNM VA G RIE LRCDKGGE TG+E R + +E+ ATNT Q+ GVSERDGQ LA +T ++DGDFP MWGELM TA YL+NR+PH+ + GAT Y+KM+N PD + LR+IGARAFVH E F KL+DRAFEGKL GY +SK YRIY K KV ESRN TF+ET
Sbjct: 162 LVDSGASETMFDDRLIPN--GRLEEERP--TPKIIDVAGESQLRGTTTGVLHCTIKDDKEQQLPVKLQGLIVPGLGRNIFAPTALLKKGLRCVLEDKTPHLPIGGEVVVPLKHETQDQGMCTLAITFKGDPASTSKTPPNNQEPGRKPKFGKPEAVQIDHTPHATCSVAMSVSTDLWHRRLGHINLSATEILRRNPATGVKYDGPVSPCDNCQITKHKKAPVPKKTSRVLTKPGQLVQFDNMGPIDPPANYNGRTYFYVAKATDVCTRMREVYLLRHRTETTQALHAYNMQVASE-GYRIEVLRCDKGGENTGEEMRNYWRESAIKLEFAATNTPQEIGVSERDGQTLAAVTRALLRDGDFPKHMWGELMMTAAYLTNRTPHAAVGGATPYAKMYNTTPDHSRLRSIGARAFVHHERFKKKLDDRAFEGKLCGYGPDSKTYRIYVEGKDKVYESRNVTFIET 618
BLAST of mRNA_P-littoralis_Contig1267.2.1 vs. uniprot
Match: A0A6H5JTQ0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTQ0_9PHAE) HSP 1 Score: 436 bits (1121), Expect = 1.330e-136 Identity = 241/462 (52.16%), Postives = 303/462 (65.58%), Query Frame = 1
Query: 4 LVDSGASESFLDDELIPDLKSRMLEFKAFSTPREITTAGKHTLHGIGTGIISFTIRDTHGTQLPVNMRALVVPGLDRNIFAPIAELRNGVRFVLEKKT-YLTIDG-TVIPLKQDPRDQGMCSLDITFQRDSHGV---------------LGKSEGVSFDGGTGAVYTA--TTSASVWHRRLGHMNPRKMEVLRKKKGNGVEYTGTISGCDICSVTKSKQQAHPKESTRKTTRPMQLIYTDLMGPITPAAKGGHR---FVSKFTDDYSRMKEIYLLKNKPEAAESLHQYNMTVAVPLGLRIENLRCDKGGEYTGQEFRTLCVGTGTNIEYTATNTSQQNGVSERDGQILAKIT*CFMKDGDFPPFMWGELMFTATYLSNRSPHSTLEGATLYSKMHNMEPDLTGLRAIGARAFVHRETFTNKLEDRAFEGKLYGYSHNSKAYRIYNPAKGKVVESRNGTFLET 1323
LVDSGASE+ D+ LIP+ R+ E + TP+ I AG+ L G TGI+ TI D QLPV ++ L+VPGL RNIFAP A L+ G+R VLE KT +LTI G V+PLKQ+ +DQGMC+L ITF+ D GK E V D A + + SA +WHRRLGH+NP ME+LR+ GV+Y G +S CD C +TK K+ PK+++R T+P QL+ D MGPI P AK R +V+K TD ++RM+E+YLL+++ E ++LH YNM VA G RIE LRCDKGGE TG+E R C + +E+ ATNT Q+ GVSERDGQ LA +T ++DGDFP MWGELM TA YL+NR+PH+ L GAT YSKM+N PDL+ LRAIGARAFV+ E + KL DRAFEGKL GY +SK YRIY K KV ESRN TF+ET
Sbjct: 380 LVDSGASETMFDNRLIPN--GRLEEERP--TPKIIDVAGESQLRGTTTGILHCTIEDDKEQQLPVKLQGLIVPGLGRNIFAPTALLKKGLRCVLEDKTPHLTIGGEVVVPLKQETQDQGMCTLAITFKGDPASTSKTPPNNQEPGRKPKFGKPEAVQIDHTLHATCSVAMSVSADLWHRRLGHINPSAMEILRRNPATGVKYDGPVSPCDNCQITKHKKAPVPKKTSRVLTKPGQLVQFDNMGPIDPPAKYNGRTYSYVAKATDVFTRMREVYLLRDRTETTQALHAYNMQVASE-GYRIEVLRCDKGGENTGEEMRNYCRESAIKLEFAATNTPQEIGVSERDGQTLAAVTRALLRDGDFPKHMWGELMMTAAYLTNRTPHAALGGATPYSKMYNTTPDLSRLRAIGARAFVYHERYKKKLVDRAFEGKLCGYGPDSKTYRIYVEGKDKVYESRNVTFIET 836
BLAST of mRNA_P-littoralis_Contig1267.2.1 vs. uniprot
Match: A0A6H5KT84_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT84_9PHAE) HSP 1 Score: 414 bits (1064), Expect = 1.660e-135 Identity = 211/397 (53.15%), Postives = 263/397 (66.25%), Query Frame = 1
Query: 130 LHGIGTGIISFTIRDTHGTQLPVNMRALVVPGLDRNIFA-----------PIAELRNGVRFVLEKKT-YLTIDGTVIPLKQDPRDQGMCSLDITFQRDSHGVLGKS----EGVSFDGGTGAVYTATTSASVWHRRLGHMNPRKMEVLRKKKGNGVEYTGTISGCDICSVTKSKQQAHPKESTRKTTRPMQLIYTDLMGPITPAAK---GGHRFVSKFTDDYSRMKEIYLLKNKPEAAESLHQYNMTVAVPLGLRIENLRCDKGGEYTGQEFRTLCVGTGTNIEYTATNTSQQNGVSERDGQILAKIT*CFMKDGDFPPFMWGELMFTATYLSNRSPHSTLEGATLYSKMHNMEPDLTGLRAIGARAFVHRETFTNKLEDRAFEGKLYGYSHNSKAYR 1263
L G TGI+ T++D G QL V ++ L+VPGL RNIF+ P + L+ G+R V+E+ T +LTI VIPL QDPRDQGMC+LDITF+++ KS + S AV SA WHRRLGH+N R +++LRK G GV+Y ++S C +C + K KQ HPK+STR+ +RP QL+ D MGP+ P AK G + K TDDY++MKE+YLL+ K + E++H YNM VA G RIE +RCDKGGE TG EFR C + +EY ATNT QQ G SERDGQ LA +T C +KDGDFPP MWGELM TA YL NRSPHS L GAT YSK+HN PDL+GLR IGARAFVH E + KL+DRAFEGKL G+ +S+ YR
Sbjct: 290 LKGTATGILHCTVKDNRGQQLRVRIQGLIVPGLGRNIFSSRTLLLGMDFSPTSLLKKGLRCVVEESTPHLTIQDKVIPLTQDPRDQGMCTLDITFEQNVQPSGTKSLVPHQKQSQTHTANAVCFTLVSADTWHRRLGHLNARSLDILRKDTGTGVDYRDSLSPCGVCQIAKHKQSPHPKQSTREISRPGQLVVIDNMGPVNPPAKYKGGSFPYACKITDDYTKMKEVYLLRKKSDTTEAVHTYNMCVAAAGGYRIETIRCDKGGENTGSEFRDYCKNSAIKLEYAATNTPQQIGASERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSPHSALGGATPYSKLHNKSPDLSGLRVIGARAFVHHERYRKKLDDRAFEGKLCGFGLDSQTYR 686
BLAST of mRNA_P-littoralis_Contig1267.2.1 vs. uniprot
Match: A0A6H5JYD3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYD3_9PHAE) HSP 1 Score: 416 bits (1069), Expect = 1.640e-134 Identity = 225/458 (49.13%), Postives = 284/458 (62.01%), Query Frame = 1
Query: 1 LLVDSGASESFLDDELIPDLKSRMLEFKAFSTPREITTAGKHTLHGIGTGIISFTIRDTHGTQLPVNMRALVVPGLDRNIFAPIAELRNGVRFVLEK-KTYLTIDGTVIPLKQDPRDQGMCSLDITFQR-----------DSHGV-----LGKSEGVSFDGGTGAVYTATTSASVWHRRLGHMNPRKMEVLRKKKGNGVEYTGTISGCDICSVTKSKQQAHPKESTRKTTRPMQLIYTDLMGPITPAAKGGHRFVSKFTDDYSRMKEIYLLKNKPEAAESLHQYNMTVAVPLGLRIENLRCDKGGEYTGQEFRTLCVGTGTNIEYTATNTSQQNGVSERDGQILAKIT*CFMKDGDFPPFMWGELMFTATYLSNRSPHSTLEGATLYSKMHNMEPDLTGLRAIGARAFVHRETFTNKLEDRAFEGKLYGYSHNSKAYRIYNPAKGKVVESRNGTFLET 1323
LL+D+GASE+ LDD LIP LK M E K + P+ ++ G H L G TG+I T++D++G + V +R LVVPGL RN+F+ A+++NGV+ V+E+ +L + G +PLKQDP D GMCS+DI FQ SH + +GK + V D G AT +A+ WHR L H+N R ME+LRKK+ NGV+++ +++ CDIC+++KS+Q AHP+++ R+TT PMQL+YTD MG TP AKGG +VSKFTD YS MKEIYLLK E +LH YNM VA PLG RIE +RC+ GGE EF + + IEY ATNT QQNGVSERDGQ L IT MKDG FPP +W E M TA YLSNR P STL G T Y KM+N T L + SKAYRIYNPA G VVESRN TF+ET
Sbjct: 136 LLIDTGASENMLDDRLIPGLKEIMRESKELAKPKVVSVGGGHELDGNATGLIHCTVKDSNGEKKAVLLRGLVVPGLGRNVFSRAAQIKNGVKLVIEEGNPHLAVGGHTLPLKQDPLDMGMCSVDIEFQAASEQTTASTKPTSHALPDDRAIGKPDTVMLDDDLGVACAATVNANTWHRWLRHLNFRSMELLRKKEDNGVDFSDSMTPCDICAISKSRQLAHPEKTNRETTAPMQLVYTDNMGKTTPLAKGGFGYVSKFTDAYSWMKEIYLLKAISETVRALHAYNMQVAAPLGRRIEIIRCESGGENVANEFTKYFMDSDITIEYAATNTPQQNGVSERDGQTLTTITRYLMKDGAFPPTLWREQMMTAEYLSNRPPRSTLGGVTPYFKMYNTARKRTCLAS-------------------------------SKAYRIYNPATGNVVESRNVTFIET 562 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1267.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1267.2.1 >prot_P-littoralis_Contig1267.2.1 ID=prot_P-littoralis_Contig1267.2.1|Name=mRNA_P-littoralis_Contig1267.2.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=309bp MLEFKAFSTPREITTAGKHTLHGIGTGIISFTIRDTHGTQLPVNMRALVVback to top mRNA from alignment at P-littoralis_Contig1267:9151..10473- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig1267.2.1 ID=mRNA_P-littoralis_Contig1267.2.1|Name=mRNA_P-littoralis_Contig1267.2.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1323bp|location=Sequence derived from alignment at P-littoralis_Contig1267:9151..10473- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig1267:9151..10473- >mRNA_P-littoralis_Contig1267.2.1 ID=mRNA_P-littoralis_Contig1267.2.1|Name=mRNA_P-littoralis_Contig1267.2.1|organism=Pylaiella littoralis U1_48|type=CDS|length=927bp|location=Sequence derived from alignment at P-littoralis_Contig1267:9151..10473- (Pylaiella littoralis U1_48)back to top |