mRNA_P-littoralis_Contig1265.1.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_P-littoralis_Contig1265.1.1
Unique Name	mRNA_P-littoralis_Contig1265.1.1
Type	mRNA
Organism	Pylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))

Homology

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BLAST of mRNA_P-littoralis_Contig1265.1.1 vs. uniprot
Match: A0A6H5LER2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LER2_9PHAE)

HSP 1 Score: 245 bits (625), Expect = 6.590e-66
Identity = 225/585 (38.46%), Postives = 267/585 (45.64%), Query Frame = 3

Query:    3 GSWKKCMSRRHNPRMSTVRQEELTHGHRQCVKPDQAITIYKLRDHETNDEFLEFDEEIIFQTACLDCLNIKSCINAGHKLVDWRPTFAGGRMAGSPSPFSASDQPPASSSLRSMSPPLGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRTFGLASVVAQEEEVSNGGADGWKGSHAGRKADVRGGAAAAAAGSKQDLAVLPKVFHKRKTPGSAATPTANNSKALASRRFSLPSPGKVLGRKRGVGRGVITPGGGVAKRVRRKSADESFVRAPKMEMEIDTDSAGMGERPHKRRGKAG---NPAAVTPSPKIFQKDSFETSSAGEDQEA--------------------------LSGGDAAVA-TPEPSSPKTVAEKLKRVQSQETELLRQFEDTHKLRAQEEEAKRREMAEFQRAGELALLAIQAEKEEALRRISEERKDKAAEREKLVQERLKEFEAXXXXXXXXXXXXXXXXXXEKERLVEESTAADAAAXXXXXXXXXAASTDIHGKRHPGWCHTSWILSGVTSAEYMRVGVQNARRTGHTPPPKKCDYVKNEKTGAKAAAVAKLLAGAVVPSSG 1667
            GSWKKCMSRRHNPRMSTVR++ELT+ HRQCVKPDQAITIYKL DHETN+++LEFDEEIIFQTAC  CLNIKSC+  G                     FSA                                                      TFG                                                                                  GK  G  +G GRG            RR+SA E        EMEI+TDS+ + ERPHKRRGKAG   NPAAVT SPK  ++DSF  S A                                +S GDA +  T  P  P TVAE+L+ V+ +E ELLR+FE+THK  AQEEEAKR+EMA FQRAGE AL A+Q EKEEAL+RIS ERK KAAER++L+ +R KEFEA                  EKE+L ++S+ A    XXXXXXXXX           P W    WIL+G+        G  +A+      PP    YV+++K  AKAAAVA+LLAG VV +SG
Sbjct:   21 GSWKKCMSRRHNPRMSTVREDELTNSHRQCVKPDQAITIYKLHDHETNEDYLEFDEEIIFQTACRMCLNIKSCLRLGKV-------------------FSA------------------------------------------------------TFGKG--------------------------------------------------------------------------------GKSAGPLKG-GRG------------RRRSAPEKL--GDIHEMEIETDSSEVCERPHKRRGKAGTPANPAAVTLSPKAMRRDSFAASPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSDGDAGLGVTSPPPVPTTVAERLELVKGEEAELLREFEETHKRIAQEEEAKRQEMARFQRAGEAALRAMQKEKEEALQRISAERKCKAAERKELLHQRFKEFEAEETELRIEARERDARLEAEKEQLAKDSSVAXXXXXXXXXXXXXXXXXXXX---XPEWASDKWILAGMNGGG----GGGSAKLPVAERPPV---YVRDQKADAKAAAVARLLAGGVVDASG 427

[Close]

BLAST of mRNA_P-littoralis_Contig1265.1.1 vs. uniprot
Match: D7G0U1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0U1_ECTSI)

HSP 1 Score: 177 bits (450), Expect = 1.770e-46
Identity = 80/98 (81.63%), Postives = 90/98 (91.84%), Query Frame = 3

Query:    3 GSWKKCMSRRHNPRMSTVRQEELTHGHRQCVKPDQAITIYKLRDHETNDEFLEFDEEIIFQTACLDCLNIKSCINAGHKLVDWRPTFAGGRMAGSPSP 296
            GSWKKCMSRRHNPRMSTVR++ELT+ HRQCVKPDQAITIYKL DHETN+++LEFDE+IIFQTAC  CLNIKSC+  GHKL+DWRPTFAGGR+AGS  P
Sbjct:   21 GSWKKCMSRRHNPRMSTVREDELTYSHRQCVKPDQAITIYKLHDHETNEDYLEFDEKIIFQTACRMCLNIKSCLREGHKLIDWRPTFAGGRVAGSSHP 118

[Close]

BLAST of mRNA_P-littoralis_Contig1265.1.1 vs. uniprot
Match: D7G0T9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G0T9_ECTSI)

HSP 1 Score: 99.4 bits (246), Expect = 2.210e-17
Identity = 41/88 (46.59%), Postives = 61/88 (69.32%), Query Frame = 3

Query:   18 CMSRRHNPRMSTVRQEELTHGHRQCVKPDQAITIYKLRDHETNDEFLEFDEEIIFQTACLDCLNIKSCINAGHKLVDWRPTFAGGRMA 281
            C+ R+HN R++ V+++EL   HRQCVKPDQ +TI+KL D  T +E +E+  ++IFQ  C  C+++K+CI  GH+L DW P    GR +
Sbjct:   26 CIMRKHNARLTAVKRDELAARHRQCVKPDQTMTIFKLVDRNTGEESVEYSPDMIFQRPCASCIHLKTCILGGHELTDWTPEGGRGRAS 113

The following BLAST results are available for this feature:

BLAST of mRNA_P-littoralis_Contig1265.1.1 vs. uniprot

BLAST of mRNA_P-littoralis_Contig1265.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 3


Match Name	E-value	Identity	Description
A0A6H5LER2_9PHAE	6.590e-66	38.46	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7G0U1_ECTSI	1.770e-46	81.63	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
D7G0T9_ECTSI	2.210e-17	46.59	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-littoralis_Contig1265	contig	P-littoralis_Contig1265:147..10004 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
Pylaiella littoralis U1_48 OGS1.0	2022-07-08

Properties


Property Name	Value
Stop	1
Start	1
Model size	4409
Hectar predicted targeting category	other localisation
Exons	10
Cds size	2181

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_P-littoralis_Contig1265.1.1	prot_P-littoralis_Contig1265.1.1	Pylaiella littoralis U1_48	polypeptide	P-littoralis_Contig1265 167..7796 +

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1680789559.177581-UTR-P-littoralis_Contig1265:146..166	1680789559.177581-UTR-P-littoralis_Contig1265:146..166	Pylaiella littoralis U1_48	UTR	P-littoralis_Contig1265 147..166 +
1680789559.311287-UTR-P-littoralis_Contig1265:7796..10004	1680789559.311287-UTR-P-littoralis_Contig1265:7796..10004	Pylaiella littoralis U1_48	UTR	P-littoralis_Contig1265 7797..10004 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1680789559.1908903-CDS-P-littoralis_Contig1265:166..253	1680789559.1908903-CDS-P-littoralis_Contig1265:166..253	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig1265 167..253 +
1680789559.2020671-CDS-P-littoralis_Contig1265:858..977	1680789559.2020671-CDS-P-littoralis_Contig1265:858..977	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig1265 859..977 +
1680789559.2153463-CDS-P-littoralis_Contig1265:1440..1819	1680789559.2153463-CDS-P-littoralis_Contig1265:1440..1819	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig1265 1441..1819 +
1680789559.226812-CDS-P-littoralis_Contig1265:2195..2312	1680789559.226812-CDS-P-littoralis_Contig1265:2195..2312	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig1265 2196..2312 +
1680789559.237644-CDS-P-littoralis_Contig1265:2763..2892	1680789559.237644-CDS-P-littoralis_Contig1265:2763..2892	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig1265 2764..2892 +
1680789559.2485452-CDS-P-littoralis_Contig1265:4634..4724	1680789559.2485452-CDS-P-littoralis_Contig1265:4634..4724	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig1265 4635..4724 +
1680789559.2628539-CDS-P-littoralis_Contig1265:5311..5503	1680789559.2628539-CDS-P-littoralis_Contig1265:5311..5503	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig1265 5312..5503 +
1680789559.2758904-CDS-P-littoralis_Contig1265:5931..6015	1680789559.2758904-CDS-P-littoralis_Contig1265:5931..6015	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig1265 5932..6015 +
1680789559.2864103-CDS-P-littoralis_Contig1265:6555..6633	1680789559.2864103-CDS-P-littoralis_Contig1265:6555..6633	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig1265 6556..6633 +
1680789559.300915-CDS-P-littoralis_Contig1265:6890..7796	1680789559.300915-CDS-P-littoralis_Contig1265:6890..7796	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig1265 6891..7796 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at P-littoralis_Contig1265:147..10004+
coding sequence from alignment at P-littoralis_Contig1265:147..10004+

protein sequence of mRNA_P-littoralis_Contig1265.1.1

>prot_P-littoralis_Contig1265.1.1 ID=prot_P-littoralis_Contig1265.1.1|Name=mRNA_P-littoralis_Contig1265.1.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=727bp
MSRRHNPRMSTVRQEELTHGHRQCVKPDQAITIYKLRDHETNDEFLEFDE
EIIFQTACLDCLNIKSCINAGHKLVDWRPTFAGGRMAGSPSPFSASDQPP
ASSSLRSMSPPLGGGGAGSGGAGASTGVGVAKKGRGGGTPTRSKSNRNRT
FGLASVVAQEEEVSNGGADGWKGSHAGRKADVRGGAAAAAAGSKQDLAVL
PKVFHKRKTPGSAATPTANNSKALASRRFSLPSPGKVLGRKRGVGRGVIT
PGGGVAKRVRRKSADESFVRAPKMEMEIDTDSAGMGERPHKRRGKAGNPA
AVTPSPKIFQKDSFETSSAGEDQEALSGGDAAVATPEPSSPKTVAEKLKR
VQSQETELLRQFEDTHKLRAQEEEAKRREMAEFQRAGELALLAIQAEKEE
ALRRISEERKDKAAEREKLVQERLKEFEAEEEVSRIEAREKDARLEAEKE
RLVEESTAADAAAAAGSDGSDGAASTDIHGKRHPGWCHTSWILSGVTSAE
YMRVGVQNARRTGHTPPPKKCDYVKNEKTGAKAAAVAKLLAGAVVPSSGV
GAESILERRAPAAAAGAAAAAAAAAAAGGAGGQGGSMSVKGVTAAVGGGA
GGGTRKSECPLGDASNGGGLQSTRSSTAPMPSEVVGGDAADSWDSKTGTG
AVVPEDTAVSDPAVAAAAASTTTVVETRQKEGPVEGVAKRNGHDVPVAAT
AVSDSAPSVKRFGSVRIGLILPSFEE*

mRNA from alignment at P-littoralis_Contig1265:147..10004+

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_P-littoralis_Contig1265.1.1 ID=mRNA_P-littoralis_Contig1265.1.1|Name=mRNA_P-littoralis_Contig1265.1.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=9858bp|location=Sequence derived from alignment at P-littoralis_Contig1265:147..10004+ (Pylaiella littoralis U1_48)
AGGGGAGCTGGAAAAAGTGCATGTCCAGGAGGCACAACCCGAGGATGTCC
ACCGTACGGCAAGAGGAGCTCACGCACGGGCACCGGCAGTGCGTGAAGCC
TGACCAGGTGATTCGTCGTCCCAGACCCCCCGAGAGTTGAAAATAACTTC
ACCATGTTCCTGGTATATTATATCATGTGATCAACGTTTGTACGAAGTAC
TTCGAAGTATGATTTCAGGGCGTCCGAGCGGCAACGAGCGTCGATTTATC
GAGTCTTTGTCGCTTTTTGTTTCGCCTTCTTTTTTTTTCGAGCAGAGAGC
ACAACAAGTCTTGAGAAACATCAGGAAAACGCCAAGAGATTAGCACCACC
CACCTGAGGCGGGACTGCGGAGAATTTCTTGAATTATCTGCAGAGAGGAG
GTGTAGTTTGTCGGAAAAAAAAAAAAAAAAAAACGCCCACATAGACACAC
GGCAGTTTATTGTAGTTTTGGGTCGGAGAATGATAATACTCATTTTGAAA
AATTATCACCCAGAGGAAACGAGGCTCTTTCGGTCTGGCGTCGGAAATCC
ACCTTCCGCTCCTTCGCCACACCTAATAAGGACTGCTGGTGCTAGTCTTA
CCGTAGCCTACTTTTGGTTTTCTGCTCAAACCAACCTGGCAAAACTCGCG
ATTTCGACACCTCATTCTTGTGCGTACCTATCATACCCCGCACCGTCGTT
CGCCGCTCAAAGGCCATTACAATCTACAAACTCCGCGACCACGAGACGAA
CGACGAATTCCTCGAGTTCGACGAGGAGATTATTTTCCAGACGGCGTGCC
TGGATTGCCTCAACATCAAGTCCTGCATCAAGTAAGCAAACTCCCGGTGT
TCTTGGTCGGTGTCAAGAGGACTCGGTCAGCGCGAAGGTCACCTGAATCT
AAATCTATGTGCCGGGCCATTACGATGACACGCAAAAAATATATATATTC
AGCTGTGCGGCACTAGTAAAGACGACAGAGTCTCGACGTGCGACATCCTG
GTTTACGCGGCCCGACGTGACATTTAACAAGAGCATCGTACTGTTGTTCA
GTGTCTTCCTTAGGTGGATATCGGCTGCCGGTGACACGAGAAATCATTTG
TACGCACACACACACATTCTTCTACAAAATTATCGTAGGAAGTGACAAAC
AAGCCCTCTCGGGATGTTCCAGGTCTATGATATCCTCGTGTACGCCCTAA
CCTTGACCCTTTTAGAAATATCGACGTGACCTATGACCTACTCTGAAGTG
CTCACCGTCGACCGCACGTGTAACCCTAACCTTTATAAACTCAGCGCCGG
GCACAAGCTCGTCGACTGGCGACCCACTTTTGCCGGCGGAAGAATGGCCG
GATCTCCATCGCCATTTTCGGCGTCCGATCAACCTCCCGCCTCTTCTTCG
CTGAGAAGCATGTCCCCGCCGCTGGGCGGCGGTGGCGCCGGCAGTGGCGG
CGCCGGCGCCAGCACCGGCGTTGGGGTGGCGAAGAAAGGCAGGGGCGGGG
GCACACCGACCAGAAGCAAGAGCAACAGAAATAGAACATTTGGGCTTGCG
TCGGTGGTGGCGCAGGAAGAGGAGGTCAGCAATGGGGGTGCCGATGGCTG
GAAAGGGTCGCATGCTGGAAGGAAGGCGGATGTTCGAGGGGGCGCCGCCG
CTGCTGCTGCTGGTTCCAAGCAGGTTTGTTTGATGGGTGTGGTGGTAGGA
CAGTGGTTGTGGGCTTGTTCGGCACAGCTGGCGCCACTTTGGTGCTGCTT
GCTTGTTTTCGCCATTTGTATTTTTCAGGTCGATGAGCATGAAATTTCCG
AAGCAAAGTATCTTAAGCTTCCTCCGTTTCCTCCTCTCGTGCGGGGGGCA
ACAATGACACAGGAAGCGTTTTTTTCTTCTCTTCTGTGGGTGTTTGTGTT
GAGGTCGAGCAGGTGGCGCTGTTGTTGCTGCTGTGGAGGTGGAGGTGGTG
GTGGTGGTGGTATTTGACTTCACATTGACGATCGTACCCTGGCAACATCC
AGCGTTTTGGTCCTGACTTGTTGAGCTTGTCGTCTTCATTTTTCGGCAGG
ATTTAGCTGTACTGCCCAAGGTTTTCCACAAGCGCAAGACGCCGGGCTCC
GCCGCCACCCCTACAGCGAACAACAGCAAGGCGTTAGCGAGCCGGCGATT
TTCCCTCCCCTCTCCGGTGAGCACACTGAACGAAACGTCGCTTGTCGTGG
GTTTGCAATGGAAATAGGTGATCGGGAGGAGGGAAGAGTCAAGTCAGGCT
TGAGGTGTTGAGGTTAACCCTCTTACCCCTACTCGTAGGTAGCCAAATGT
CGCCATTTTGTTATTCGTCACTTTGAATATCTCGTGACTACCAATAGCTA
AACTTTGACCTCGCCTACCGCTCAGTTTGCAAACGCGTTCTGTAAGCAAG
TGAACGCGTCGCCATTGTTTTGGCGACGCGCTCACTTGATTTCATAGAGA
TTTTGGTGAAAAGAAAGATTCCATGATTTTTCCCAGGGGGGTAAAAAAAG
GGTTGAAAAATGTCACCACATGTGCAGGGGCAAGCGCTGTGTTTTGCGCC
TACCTTCCTTTCCCGGTTTCCGTTTCTTGTTGACATCGTCGCTGTGTTGC
TTGCGATCGTGTGGAAGGGCAAGGTGTTAGGGCGCAAGCGTGGCGTCGGG
AGAGGGGTCATCACGCCCGGAGGAGGCGTCGCCAAGAGGGTACGAAGAAA
GAGCGCCGATGAAAGCTTCGTCCGCGCGCCCAAGATGGAGATGGAGGTGA
GGCGTGTTTGGTGCGCATCCCACGGAACGAAGGAATGACTTTAGTGCGCC
TATAGCGGTACGGTGGGTCGCAGAAGATCCCACGAATTCCGCTGGACCAA
TTCTCAAAGGTCGATTGCCGTACAGTAAGTACTCTAGGTCAGGATTAGAA
ATCGAAAAGGACAGCCGGCGATGAAACTTGTCTCCCACATTAAAACTTGT
TTTTTGATTGATGTTGCCTTGGCTCATAACCTGATCAATCGACCGTTGAA
AAGCGGTCCAGGGGGTGCCGTGGTGTCTTATGCGACCTACGATGGTGTTG
TCGTTTCGCGTGGTTAGAGGGCCCATTTCTCAGCTCGTTTCATCAAAGCG
CTCCTTCGGTTCTAGTCAGGGACCACACTCTGGACAAAAGACGACTTTCA
ATTGCTAATGTTATTGCTACGTCATGTTTTCCCTCGGCAACAACTATTGA
TGGATAGGTTTCTACACTTTTTTGTCTAGGGACATGCCTATCGATAGGCC
TCTTTTCCATGCTATTCCCCGCGACCGAATGTTTTGATACCTGGATAACC
TGACTCATTGTTTGCGTTATTGTATATTGATGGAAGAATCGGATGGTCAA
TTGTTGACGGCAATGGCTATCGATCGGAGTCCTGTCAAATATATTGTGAC
TGACAATGTCCATCGATATACGCATCCCGAAATGCATCGTACACATCACG
TCTGTCGATGCAGAGAAAGAGGGTAGTCTGTATGGGGACTAACGTGTGTG
TGCTCAAGATGTGCCTCATACCCTGGACAATCGACGGTGTAATAGAACAT
TGCCGCCGCGATGGCCCCGAGAATCTGAACGTCGGTGGCCTGTTATCGGC
GACAAGGCATTGGCATCGCCGTCTATCGAAATGAATTGGGGGTAACAAAA
GAGTTGGGAACAAAGGCCCTCACCATGGAGTGGGCAAGTTCTCGATCAAT
GTATGATATTTGTTGCAATAGACCGATAGCTATCGCGCACATCAATGGCC
ATTGGTAGACACAATAAGAGTTCATCCGCGTCCATCAACAGCCATTGCCG
GCCACAATAATTATGTCTGTAGGTATTGTGTGCCACGGGGGGTCACGATC
CCTGGCCGCGCAGAGAAGTATTGCGGATGGATTATATGAATTTTGTGGAG
TTACTTGGCGGCAGCAAACCGGCCACACGGACGTTTTCAGAACCAAATAT
ACATCTTCATATTTCCGATTACATTGTGCATATCACCCAAGCATATGTTA
GCAGTATTTCTGCTGCTGTAGATGGATGAACGAGGTTTTCTTCAAAATCT
AATGTTTTTGGCGTGGCTATTAATAGGTCCCTCATAACTTGTTGTTCGTG
GCAATGGCTATCGATCGAATCACTCCCTTATCTATTGTAGACGGCAGTGG
CTATCGATAGAAAGATCTCCCGATCCATCACGGCCTTCGATCCATCTCGA
TGGTCAGCTATCTCGATCTGTTGTTACTGCAATAGACTATCGATGAAGTT
CCTTGTCTATTGTCTCCGGCAATACGTACCGAGGGATCGGTTCCAACATC
GGTTGTACACTACAATGGGCATCGATAGATTTTCACCCACGTCTCGTGTC
GAAGCAACGGACTACTGCTGCCATGTAAGTTGTCCACGGTGTGGTTCTAC
CACACAACGATTGTAGGAAATCGTTCCTCGATCGCTAACTAGCCGCCGCC
CCTCACGCCACCCCTAATCCAATTCACTGGCGGGTCAGATCGACACTGAC
TCTGCAGGAATGGGCGAGCGACCGCACAAGCGGCGCGGGAAAGCGGGCAA
CCCGGCAGCGGTCACGCCCTCACCAAAGGTAGGACATATTTTCATTTCGA
GACGAACGTTCCCATGATATTGGTACTTGAGAGGAAGAATGGTAGCTCGA
AAGCTCGAAAGCATTTCAGGCACCCCGTGTTGGTTGTTTTGGTTGATAGT
CCGCGCTTGGCGAGGCGGTGTTTTTTGTCCGCGTTGACAAGAACTGACCC
CGTTCGTTACGCACGATAACCATTGTCAAGGTTGCTGGGCCGTTTCAAGA
GACACATACATCGTTCGGTCGAATGTATCACCGAGATCCAACGGTTTGTA
CCATGTAGTTACGTGGCAATGCAGGTATGCAGTGTTCGCAACGCTATGTG
ATTGGTGACTGGAGTAGCGTTTCAATGGAGAGAAGAGACTCGCAACGTAT
GACAGGGGTGGAACCGCGAAAGAGTGGAGTACGAACGAAGTACATGTCAT
GCAACGCCGTTCATCGTAAAACAGAACAGGTCACGGACCGTCCGCCTTTC
CCAAACACACGAAACAAGAAATATTCAAACCAAAACACATCCATGTATAT
GCATGTGTAATTTGCTCTTCCGCTGGCCTGTCGCCTGTATCACCATGGAC
GGCGGAACGTCTCAGATATTCCAGAAAGACTCGTTCGAGACGTCTTCCGC
CGGCGAGGACCAGGAGGCTTTGTCGGGCGGGGATGCAGCCGTTGCCACCC
CGGAACCCTCAAGTCCGAAGACTGTTGCGGAGAAGCTGAAGCGGGTGCAG
AGCCAGGAAACGGAACTCCTTCGCCAGTTTGAGGACACGCACAAGCTGAG
AGCCCAGGCAAGAAGCGGAAGCGTGTACTTGGGAGTGTCGTGCGATAGGT
AGTTCGCCGTGCCTTGCCTGATTTCCCATGTCTCGGTTGCTGTAGCACCT
TGAACGAGGACACCTGTCGCGACTGCATGTCATACAATCATGCAAACAAT
CATGCATGCACCGACCACGATGTATCACAGTACACGTCCTGCCCGCCACA
TGTGCAGGAGTGAAACACCCACCGTGTAAAATCGACAGGCTGAAAAGAAA
ACGGGAGCAAGCAATCCTCGATACACAGCAGCAACGCTTTCCGTCTCTCG
CCGTATGTGTTTCGAGCGTGTTGAAGAGGCTAGAGCTACAGCAGCAGTGC
CGCTGCGTCCGCACATTTTGACAAGTGTGTTGAAGTTTAAATAATATTGT
GTGCGTTTTGTATTTGCATCGATTACATCGAACAGGAAGAAGAAGCAAAG
CGCCGAGAGATGGCGGAGTTTCAGCGGGCCGGCGAATTGGCGCTGCTCGC
CATTCAAGCCGAGAAAGAGGTACGCAAAGCACACCATACAAACCAGCTCT
GGCCCAACCAACCTTTGTCAGTCGTCGTTGGGAGCGCGCCTAGACACCGT
ATGATACGCGTAACCTCCGTTGGTCGGTACGCCTGTTGTGCAAGGCCTTT
TTGCATTTCATTTTACTTGCATCCTATGTAGCACGATAGGACGCCTGGGT
TATATCCCACGTTTCGGATTTTGCCGAGAAGCGAAGGTGAGAACAATATT
AACAACGTACCCATGGAGATGTCTTGAGTGCCCATCGGTGACGGGGGGCT
CAGGCGGGTAACATGTGCCTGGTTTGTGCCCTCGAGCTAGACTGCGGTGG
TGGTGAGCTTATGTGAGGATCAACAACAACAACAACAACAACAACAACAA
CAACAACAACAACAACAACAACAACACTGTACCTCAATCATCTTTTGCGG
TCAAAATGTGGCGATATGAAACGACCAAAACGTGGCAGCTGCATGCATGT
CCTACCGAACAGCTGAGTCTTACTGGTTTGGCGCCTTCCACGCCTCTCGA
AACCTTTAGGAGGCGTTACGTCGCATCTCGGAGGAGCGAAAGGACAAGGC
CGCGGAGCGTGAGAAGCTGGTGCAGGAGCGCTTGAAGGTGAGCACACGAT
AGCTCTCTCTCTCTCTCTCTCCCTCTCTCATTCTCTTTTTTTCTCTTTCT
CTCTCGTTCAAGCTAGCGCTGATCGCAAACTGGTTAGCCGCTTAGCTCAG
CCCGGCGGCATGGTTGCTGGGATAGCACATATGGGGCCCGGCCAACAGGA
ATTTTCCTGTACACAGTTTTTTTTGTTCGCTCGAAAACTGTTTCGGGACT
GCTCGTTCCATCATACAATGAAGTTATTCTTTGTGCGTTCACAGGAGTTC
GAGGCTGAGGAGGAGGTGTCCAGAATTGAGGCGAGAGAGAAAGACGCCCG
ACTAGAGGCCGAGAAAGAGCGCCTCGTCGAGGAATCCACCGCCGCCGACG
CCGCGGCTGCCGCCGGCAGTGACGGCAGTGACGGCGCGGCAAGCACGGAC
ATCCACGGTAAGAGACACCCCGGTTGGTGTCACACCAGCTGGATTCTCTC
CGGGGTGACCAGCGCCGAATACATGCGCGTCGGCGTTCAGAACGCGCGCA
GGACCGGCCACACGCCACCGCCGAAGAAGTGCGACTACGTGAAGAACGAG
AAGACGGGCGCGAAAGCGGCGGCGGTTGCTAAGCTCTTGGCCGGGGCGGT
CGTTCCGTCGTCGGGCGTTGGTGCCGAAAGTATCTTGGAGAGGCGAGCTC
CTGCTGCGGCTGCCGGTGCCGCCGCCGCCGCCGCTGCTGCAGCTGCTGCT
GGAGGCGCCGGCGGGCAAGGAGGGTCGATGTCAGTGAAGGGAGTCACCGC
TGCTGTCGGCGGTGGCGCCGGTGGCGGCACCAGGAAATCGGAGTGTCCTC
TAGGAGACGCTTCCAACGGCGGCGGTCTTCAGTCTACAAGGAGTTCCACC
GCACCGATGCCATCCGAGGTCGTCGGGGGTGACGCTGCGGACTCCTGGGA
CTCTAAAACGGGCACGGGCGCCGTTGTTCCCGAAGACACGGCTGTTTCGG
ATCCGGCGGTGGCTGCCGCTGCCGCTTCCACCACCACTGTCGTTGAAACC
CGCCAGAAGGAGGGGCCGGTCGAAGGCGTAGCGAAGAGGAACGGACATGA
TGTCCCCGTTGCCGCCACCGCGGTGTCGGACAGTGCCCCCAGTGTCAAGC
GTTTCGGCTCGGTGAGGATAGGCCTTATTCTACCCAGCTTTGAGGAGTGA
GGGGGGGACGGGAGAACGGAACATGGACGCACCCGTCCATCCATGATGGC
TGCCTGGGAGCATCTGTGTGCTGCCCCGCTTTCCCATTCTAGAGCGACTC
GAGAGCCCCCCGCGGCTGGTCTCGGCGAGGTTCGGAAAGGGGGCGCCTTG
TTTGTTTGAGGGGATTGGACTGCTTGTCGCCCACGATCGTGTATGTTTTT
CTGCTGCCGACCTCCGTGAACCGACCCGGGCCAACCTGAGGCGGGGGGCG
GGGGAGGAGATCGAAATTACTTACAAGTTGCCAGGAGCGTATCAAGCCCG
AACGTAGTAGAGGGTGATGTCGCTTCTAGGTAAGCTAAGCATCAACAGTA
CGTGGAAAGGATTATACAACATTCAAAGAAGTAGCGTTTTTCCCTATGCG
GCGAACGAATGAATTTACGTCAGGGCACGCGCATCTCCTCGAGGAAGGCG
TATGACGAAGGAGTACCTTCAGCTGTCCAACCCGTACCCATATTTTATAC
ACATAGTATCATAGTGCTTTGCTTACTGCAGTTCAACTATTTTCTTAGGA
TCCACCCCACCCCATCCAAGGAAAACAGCCAAAGTAAACTATTCTTCAAA
CGGGGTTGCAAATTCCTGAATGTTATCAGAAGTAGAAGAGCCCAATCGCC
AGAATCTTGGATTGCAAACGCTGGTGTTAACTTTTTGTTCGGGGTTACCG
TAGGAAGCCAGCCGTGTATTTCGAGACTTCGTTTTTTTTTGTCAATGTTA
CGGTAGAGTGCCTCGCCAGTGCTGTATGCCCCCCCCATGCGTTTAGCAGC
CCCCCCCCCCCAAATCAGTCAAACGTTTGGGTCGGTGAAAGTCTGTATCA
CACGTCCAAGGTTCCGGTGAACATATGGCATTATTCTAGAGGGTGAGAGA
ACGTGGGGGGCATGTGTAGATGTACTTAAGAAATAGGAAGGGGGGCGAAA
GGAAACACGAAGATGCTCCCGTTTGTGTGCGAAATCTGGTAGATTGTTCG
ACGTGTGACGAAGTCAACGACATGCTGTCCGTGTAGTCGTCGTTGAGGGG
CATCCTCGGCCCATCCCCTTGCGACTTTGAGGATGTGTGTACGGGTGGTT
CCTTCGAGCACACCGGTACTCTTGCTTCTGCTGAACCCCTTGAAACTACA
GCGGCCCCCTCATCGATGACTTGTGTCGGAGAAAAACCGGAAGTTGGAGG
AGGTTAGTTGGGGTATTCCGCCCGACTGCTGTGCACGTGTACGCTCCGAA
ACGTCGTGAGCAGAGCAGTTTTGTGTAATGAATATCGTGAGTGAGAGGGG
TTACTTGGTGGACGAAAGATTGCGAGTCGAGCTCGAAAAGGGTGTGCTTT
GTGGTGCCCACAGTCTTGTACGATACTCCGGGGTACCGCACAAGATGGGA
AGTGGTTACATCGTCACACAGAGCAAGGGGAATTATCATGTATGCGGGGG
TGCACGGCACGCTAACGTTCGCGGCTTGTAAGATTCATCACCTCCTGACG
TAGCATGGACTTTAGAGTGACGTTTTTTGTATTTGAGGGGAGGAGGGAGG
GGGTTGCGATGGTGTACGCATTGTACAATGTATGCTTTGTGTATAAAACG
TATACCTGGTTTACTGTACTGATATAGATGAGGCCGCCCTCGTGCGAGGA
TGCATTGGTGTACCCCCCCCCACCGCGTACCCACTCTCATTTTACAACCC
TTTTTGTTTTCGTTTCGAAATTCTTGCTGGTACAGCAACGCATAGGCGGG
TATCGAGTGCTATCGAAGACTAGAAGTTTGTGAAAATCGAAGAGCCACCG
TGGCTTGAGAGGTGCGTCCCCAGTATGTACATGTAGTGAAGGCGAACGGT
GTTGCCAACGCTTTTTCTCCACAACGGCGACGGCGTGGATGCCGAAAAAG
TGGGACGATTCGAGACGTGCTGCTATTTTCGTATCCGTTTGTAGCCTAAT
AATTGCCCTCTGCAAGGGCGCTTCCAGTTTTTAATTTTTGGACGAAGCGA
AATCGCGAGACCATAGACACGTGATGTGTGAGTCCGTGAAAGGCGCAAGA
AAAAAAATTAGACAAGGAGAGAAGAAGGACAGCAGTCATCACATGAAATA
AAAAACAAGAAGACCCCCCGTTCCAAACAAGACAAAAAAGACAAGGAAAG
AAGAACAGGACAGGTAGGAAAAGAAATAAACAATCGAGGGAATCGAAGCC
GTTGGCGA

Coding sequence (CDS) from alignment at P-littoralis_Contig1265:147..10004+

>mRNA_P-littoralis_Contig1265.1.1 ID=mRNA_P-littoralis_Contig1265.1.1|Name=mRNA_P-littoralis_Contig1265.1.1|organism=Pylaiella littoralis U1_48|type=CDS|length=2181bp|location=Sequence derived from alignment at P-littoralis_Contig1265:147..10004+ (Pylaiella littoralis U1_48)
ATGTCCAGGAGGCACAACCCGAGGATGTCCACCGTACGGCAAGAGGAGCT
CACGCACGGGCACCGGCAGTGCGTGAAGCCTGACCAGGCCATTACAATCT
ACAAACTCCGCGACCACGAGACGAACGACGAATTCCTCGAGTTCGACGAG
GAGATTATTTTCCAGACGGCGTGCCTGGATTGCCTCAACATCAAGTCCTG
CATCAACGCCGGGCACAAGCTCGTCGACTGGCGACCCACTTTTGCCGGCG
GAAGAATGGCCGGATCTCCATCGCCATTTTCGGCGTCCGATCAACCTCCC
GCCTCTTCTTCGCTGAGAAGCATGTCCCCGCCGCTGGGCGGCGGTGGCGC
CGGCAGTGGCGGCGCCGGCGCCAGCACCGGCGTTGGGGTGGCGAAGAAAG
GCAGGGGCGGGGGCACACCGACCAGAAGCAAGAGCAACAGAAATAGAACA
TTTGGGCTTGCGTCGGTGGTGGCGCAGGAAGAGGAGGTCAGCAATGGGGG
TGCCGATGGCTGGAAAGGGTCGCATGCTGGAAGGAAGGCGGATGTTCGAG
GGGGCGCCGCCGCTGCTGCTGCTGGTTCCAAGCAGGATTTAGCTGTACTG
CCCAAGGTTTTCCACAAGCGCAAGACGCCGGGCTCCGCCGCCACCCCTAC
AGCGAACAACAGCAAGGCGTTAGCGAGCCGGCGATTTTCCCTCCCCTCTC
CGGGCAAGGTGTTAGGGCGCAAGCGTGGCGTCGGGAGAGGGGTCATCACG
CCCGGAGGAGGCGTCGCCAAGAGGGTACGAAGAAAGAGCGCCGATGAAAG
CTTCGTCCGCGCGCCCAAGATGGAGATGGAGATCGACACTGACTCTGCAG
GAATGGGCGAGCGACCGCACAAGCGGCGCGGGAAAGCGGGCAACCCGGCA
GCGGTCACGCCCTCACCAAAGATATTCCAGAAAGACTCGTTCGAGACGTC
TTCCGCCGGCGAGGACCAGGAGGCTTTGTCGGGCGGGGATGCAGCCGTTG
CCACCCCGGAACCCTCAAGTCCGAAGACTGTTGCGGAGAAGCTGAAGCGG
GTGCAGAGCCAGGAAACGGAACTCCTTCGCCAGTTTGAGGACACGCACAA
GCTGAGAGCCCAGGAAGAAGAAGCAAAGCGCCGAGAGATGGCGGAGTTTC
AGCGGGCCGGCGAATTGGCGCTGCTCGCCATTCAAGCCGAGAAAGAGGAG
GCGTTACGTCGCATCTCGGAGGAGCGAAAGGACAAGGCCGCGGAGCGTGA
GAAGCTGGTGCAGGAGCGCTTGAAGGAGTTCGAGGCTGAGGAGGAGGTGT
CCAGAATTGAGGCGAGAGAGAAAGACGCCCGACTAGAGGCCGAGAAAGAG
CGCCTCGTCGAGGAATCCACCGCCGCCGACGCCGCGGCTGCCGCCGGCAG
TGACGGCAGTGACGGCGCGGCAAGCACGGACATCCACGGTAAGAGACACC
CCGGTTGGTGTCACACCAGCTGGATTCTCTCCGGGGTGACCAGCGCCGAA
TACATGCGCGTCGGCGTTCAGAACGCGCGCAGGACCGGCCACACGCCACC
GCCGAAGAAGTGCGACTACGTGAAGAACGAGAAGACGGGCGCGAAAGCGG
CGGCGGTTGCTAAGCTCTTGGCCGGGGCGGTCGTTCCGTCGTCGGGCGTT
GGTGCCGAAAGTATCTTGGAGAGGCGAGCTCCTGCTGCGGCTGCCGGTGC
CGCCGCCGCCGCCGCTGCTGCAGCTGCTGCTGGAGGCGCCGGCGGGCAAG
GAGGGTCGATGTCAGTGAAGGGAGTCACCGCTGCTGTCGGCGGTGGCGCC
GGTGGCGGCACCAGGAAATCGGAGTGTCCTCTAGGAGACGCTTCCAACGG
CGGCGGTCTTCAGTCTACAAGGAGTTCCACCGCACCGATGCCATCCGAGG
TCGTCGGGGGTGACGCTGCGGACTCCTGGGACTCTAAAACGGGCACGGGC
GCCGTTGTTCCCGAAGACACGGCTGTTTCGGATCCGGCGGTGGCTGCCGC
TGCCGCTTCCACCACCACTGTCGTTGAAACCCGCCAGAAGGAGGGGCCGG
TCGAAGGCGTAGCGAAGAGGAACGGACATGATGTCCCCGTTGCCGCCACC
GCGGTGTCGGACAGTGCCCCCAGTGTCAAGCGTTTCGGCTCGGTGAGGAT
AGGCCTTATTCTACCCAGCTTTGAGGAGTGA