mRNA_P-littoralis_Contig1263.2.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig1263.2.1 vs. uniprot
Match: A0A6H5KWV2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWV2_9PHAE) HSP 1 Score: 301 bits (772), Expect = 1.130e-93 Identity = 169/296 (57.09%), Postives = 183/296 (61.82%), Query Frame = 1
Query: 34 MIAELLKGSNNGVLGHGDLKRVAAMYQQTPKTVSKYWKMYNQKKEAGEEDPDLHNKRKGNSGQKGIDIAALKVVLQEIPLKNRTTIRSIAAALEIPTSTLFDNLKNLGLRSCLRFLKPLLSDDGKAQRLAWALR*VRFSPGGARKFHNFFDFVHLDEKWFYICKQGQRYYCYEGEDLPVRKVQHKSHVIKVMFLAAVARPRYDSGRNRQFDGKIGIYPFTVQRAAQRNSRNRAAGTMVTHSVEVNRATYNEKLINNVFPDIRAKFPASPIIFAQQDNAPGHRVLADPDVVAAAGQG 921
M+AELLKGSNNGVL HGD+KRVAA+++QTPKT L+WALR VR S G A KFH+FFDF+HLDEKWFYICKQGQRYY YEGE LP+RKVQHKSHVIKVMFLAAVARPRYDS R+RQFDGKIGIYPFTVQRAAQRN RN AAGTMVTHSVEVNR Y +KL NNVFPDIRAKFP+SPIIFAQQ+NAPGHR + DPDVVAAAGQG
Sbjct: 1 MVAELLKGSNNGVLSHGDVKRVAAIHKQTPKT-----------------------------------------------------------------------------------------------GLSWALRWVRPSAGDAHKFHHFFDFLHLDEKWFYICKQGQRYYFYEGEHLPIRKVQHKSHVIKVMFLAAVARPRYDSSRSRQFDGKIGIYPFTVQRAAQRNGRNMAAGTMVTHSVEVNRTLY-KKLNNNVFPDIRAKFPSSPIIFAQQENAPGHRAMEDPDVVAAAGQG 200
BLAST of mRNA_P-littoralis_Contig1263.2.1 vs. uniprot
Match: A0A6H5LD91_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LD91_9PHAE) HSP 1 Score: 235 bits (600), Expect = 4.070e-73 Identity = 120/143 (83.92%), Postives = 127/143 (88.81%), Query Frame = 1
Query: 34 MIAELLKGSNNGVLGHGDLKRVAAMYQQTPKTVSKYWKMYNQKKEAGEEDPDLHNKRKGNSGQKGIDIAALKVVLQEIPLKNRTTIRSIAAALEIPTSTLFDNLKNLGLRSCLRFLKPLLSDDGKAQRLAWALR*VRFSPGGA 462
M+AELLKGSNNG L HGD+KRV A+Y+QTPKTVSKYWK+YNQKKEAGEEDPDLHNKRKGNSGQKG+DIA LK LQ+I LKNRTTIRSIAAAL IP STLFDNL NLGLRSC RFLKPLLSDD KAQRLAWALR VR S G A
Sbjct: 1 MVAELLKGSNNGALSHGDVKRVVAIYKQTPKTVSKYWKLYNQKKEAGEEDPDLHNKRKGNSGQKGLDIATLKEALQDIHLKNRTTIRSIAAALGIPKSTLFDNLNNLGLRSCSRFLKPLLSDDWKAQRLAWALRWVRSSAGDA 143
BLAST of mRNA_P-littoralis_Contig1263.2.1 vs. uniprot
Match: W2NW41_PHYPR (HTH_Tnp_Tc3_2 domain-containing protein n=4 Tax=Phytophthora parasitica TaxID=4792 RepID=W2NW41_PHYPR) HSP 1 Score: 202 bits (513), Expect = 7.890e-57 Identity = 122/307 (39.74%), Postives = 182/307 (59.28%), Query Frame = 1
Query: 7 NLTPPEKRGMIAELLKGSNNGVLGHGDLKRVAAMYQQTPKTVSKYWKMYNQKKEAGEEDP--DLHNKRKGNSGQKGIDIAALKVVLQEIPLKNRTTIRSIAAALEIPTSTLFDNLKNLGLRSCLRFLKPLLSDDGKAQRLAWALR*VRFSPGGARKFHNFFDFVHLDEKWFYICKQGQRYYCYEGEDLPVRKVQHKSHVIKVMFLAAVARPRYDSGRNRQFDGKIGIYPFTVQRAAQRNSRNRAAGTMVTHSVE-VNRATYNEKLINNVFPDIRAKFPASP---IIFAQQDNAPGHRVLADPDVVAA 909
NLTP +++ ++ LL S+NG + GD+ A Y++ T+S+ W+++ KK EE+ +L + GN G+K ID L++ +++IPL R TI+S+AAAL + T+ + LK R +KP L+++ + R+ +AL GG F + FD VH+DEKWF + YY E+ PVR+ Q K + K MF+AAVARPRYD+ R + FDGKIGI+ F + A+R S+NR GT+V +VE V+R Y I ++ P I+AK+P S I+ QQDNA H + DPD++AA
Sbjct: 5 NLTPTQRQTIVCFLLDRSDNGEISGGDISAAVAKYERHRSTISRLWELH--KKTQTEENRLGNLASGLIGNCGRKAIDTDELRLQIRKIPLSRRMTIKSLAAALGVSTTVIRRLLKEGAFRRHSSNVKPALTEENRLARVQFALSHTTRKRGGEMVFADMFDVVHIDEKWFNEDTDRKCYYLDADEEEPVRQRQSKRFISKTMFIAAVARPRYDAHRKQAFDGKIGIWAFAEEYEAKRTSKNRPKGTIVLRNVESVDREAYKATHIGDIIPAIKAKWPRSGKKRTIYIQQDNAKPHVSVDDPDIMAA 309
BLAST of mRNA_P-littoralis_Contig1263.2.1 vs. uniprot
Match: A0A6A4ZBD2_9STRA (Uncharacterized protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4ZBD2_9STRA) HSP 1 Score: 201 bits (511), Expect = 1.780e-56 Identity = 114/297 (38.38%), Postives = 174/297 (58.59%), Query Frame = 1
Query: 10 LTPPEKRGMIAELLKGSNNGVLGHGDLKRVAAMYQQTPKTVSKYWKMYNQKKEAGEEDPDLHNKRKGNSGQKGIDIAA-LKVVLQEIPLKNRTTIRSIAAALEIPTSTLFDNLKNLG-LRSCLRFLKPLLSDDGKAQRLAWALR*VRFSPGGARKFHNFFDFVHLDEKWFYICKQGQRYYCYEGEDLPVRKVQHKSHVIKVMFLAAVARPRYDSGRNRQFDGKIGIYPFTVQRAAQRNSRNRAAGTMVTHSVEVNRATYNEKLINNVFPDIRAKFPASPI---IFAQQDNAPGHRVL 885
LTP E+R LL+ S NG L +G LK VA ++ KT+S+ WK G D+ +K KGNSG+K +A + ++ +P R T+RS+AA +P +++ +++ L+S ++KP+L++D RL +A VR P G F + ++VH+DEKWFY+ + +++Y Y+ E++ +R V+ K + KVMFLAAVARP+YD RN FDGK+G++PF V A+RNS+NRA G V V+ Y + +I+ V P I +FP + + QQDNA HR +
Sbjct: 12 LTPTERRAAYELLLQSSTNGRLKYGALKEVATYFKCHWKTISRVWKRGRLSLSDGSPHADVDSKLKGNSGRKKSRLADDFEGAIKAVPQHQRQTLRSLAAHCGLPKTSIVRHMQETKRLKSRASYVKPMLTEDNTKARLDFAKSFVRLLPSGNHAFVDMNEYVHVDEKWFYLTRVKRKFYVYDDEEVALRAVKSKQFITKVMFLAAVARPQYDHTRNAYFDGKVGVWPFVVVEPAKRNSKNRAKGAPVVVPQVVDGKVYKKAIIDKVIPAILERFPPRTLARGVVIQQDNASPHRCV 308
BLAST of mRNA_P-littoralis_Contig1263.2.1 vs. uniprot
Match: A0A6A4Z289_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4Z289_9STRA) HSP 1 Score: 201 bits (511), Expect = 1.910e-56 Identity = 116/299 (38.80%), Postives = 175/299 (58.53%), Query Frame = 1
Query: 4 KNLTPPEKRGMIAELLKGSNNGVLGHGDLKRVAAMYQQTPKTVSKYWKMYNQKKEAGEEDPDLHNKRKGNSGQKGIDIA-ALKVVLQEIPLKNRTTIRSIAAALEIPTSTLFDNLKNLG-LRSCLRFLKPLLSDDGKAQRLAWALR*VRFSPGGARKFHNFFDFVHLDEKWFYICKQGQRYYCYEGEDLPVRKVQHKSHVIKVMFLAAVARPRYDSGRNRQFDGKIGIYPFTVQRAAQRNSRNRAAGTMVTHSVEVNRATYNEKLINNVFPDIRAKFPASPI---IFAQQDNAPGHRVL 885
+NL+ E+R + LL+ S NG L L+ +A Y+ T S+ W+ +G D+ +K KGNSG+ + A ++ ++ +P +R T+RS+AA +P ST+ ++K L++ ++KPLL++ R+ LR +R PGG R F N D+VH+DEKWF++ K +R+Y Y+ E+L +R V+ K + KVMFLAAVARPRYD ++FD KIGI+PF A+R S+NRA GT V V+ Y +++ V P I+AKFP + I+ QQDNA HR +
Sbjct: 20 RNLSDVERRALYERLLQLSVNGSLPPQALRHIALEYKCHRSTASRVWQRGQASTTSGHLLADVASKIKGNSGRNKLRTAHEIEAAVKSVPHHDRQTLRSLAANSHLPKSTIVRHMKEEARLKARSSYVKPLLTEVNMVARVEHCLRFLRVMPGGGRVFENMHDYVHVDEKWFFLTKVNRRFYVYDDEELALRSVKSKRFITKVMFLAAVARPRYDHHTKKEFDRKIGIWPFVEHTLAKRTSKNRARGTPVITPQTVDSGVYQAAILDKVTPAIKAKFPRTSQRSEIYIQQDNASPHRCV 318
BLAST of mRNA_P-littoralis_Contig1263.2.1 vs. uniprot
Match: UPI000CD9DCB3 (uncharacterized protein LOC111916103 n=1 Tax=Lactuca sativa TaxID=4236 RepID=UPI000CD9DCB3) HSP 1 Score: 197 bits (502), Expect = 2.290e-55 Identity = 125/311 (40.19%), Postives = 176/311 (56.59%), Query Frame = 1
Query: 1 RKNLTPPEKRGMIAELLKGSNNGVLGHGDLKRVAAMYQQTPKTVSKYWKMYNQKKEAGEEDPDLHNKRKGNSGQKGIDIAALKVVLQEIPLKNRTTIRSIAAALEIPTSTLFDNLKNLGLRSCLRFLKPLLSDDGKAQRLAWALR*VR----FSPGGARKFHNFFDFVHLDEKWFYICKQGQRYYCYEGEDLPVRKVQHKSHVIKVMFLAAVARPRYDSGRNRQFDGKIGIYPFTVQRAAQRNSRNRAAGTMVTHSV-EVNRATYNEKLINNVFPDIRAKFPASPI--IFAQQDNAPGHRVLADPDVVAAA 912
+KN T +++ + LL+ S +G L G + VA+++ + +TVS+ W + + G D + GQK + I +V EIPL++R+ IRS+A +L + STL +K LR +KP L+ + + RL + L + FSP FH+ F+ VH+DEKWFY+ K +RYY G+D P+R + K + K+MFLAAVARPRYDS N F GKIGIYPFT A+R+S+NR AGTM T + VN+ LI V PDIRAK+P IF QQDNA H + D + + AA
Sbjct: 10 KKNTTIAQRQAIFQSLLQESFDGRLKKGSVSEVASLFSVSKRTVSRIWHQGKNQVDHGLP-VDFSSNMPMVVGQKRVQINLNQV--SEIPLRHRSNIRSLAKSLNVSKSTLHRRIKEGVLRPHTNVIKPTLTHENRRARLEYCLSKITLSSLFSP--IPTFHDMFNVVHIDEKWFYMSKPSKRYYLVPGDDEPLRTCKSKKFITKIMFLAAVARPRYDSSGNEVFSGKIGIYPFTTLEPAKRSSKNRVAGTMETKPILSVNKEVTRSWLIEKVLPDIRAKWPRGHTGPIFIQQDNAKPHIDVDDSEFLEAA 315
BLAST of mRNA_P-littoralis_Contig1263.2.1 vs. uniprot
Match: W2PWX2_PHYPN (Uncharacterized protein n=1 Tax=Phytophthora parasitica (strain INRA-310) TaxID=761204 RepID=W2PWX2_PHYPN) HSP 1 Score: 194 bits (493), Expect = 3.140e-55 Identity = 120/311 (38.59%), Postives = 177/311 (56.91%), Query Frame = 1
Query: 1 RKNLTPPEKRGMIAELLKGSNNGVLGHGDLKRVAAMYQQTPKTVSKYWKMYNQKKEAGEEDPDLHNKRKGNSGQKGIDIAA----LKVVLQEIPLKNRTTIRSIAAALEIPTSTLFDNLKNLGLRSCLRFLKPLLSDDGKAQRLAWALR*VRFSPGGARKFHNFFDFVHLDEKWFYICKQGQRYYCYEGEDLPVRKVQHKSHVIKVMFLAAVARPRYDSGRNRQFDGKIGIYPFTVQRAAQRNSRNRAAGTMVTHSVEVNRATYNEKLINNVFPDIRAKFPASPIIFAQQDNAPGHRVLADPDVVAAAGQG 921
RKNLTP E+ +IA LLK S G + + Y+ + +++ W+ Q ++G + + RKG SG+K L ++ P + RT IR++A++L I S+L D R LKPLLSD +A RL +A V P R F +F ++VHLDEKWFY+ K+ QR+Y E+ P V++K++++KVMFL AVARPR+DS R+R +DGKI ++PF V A+R+S+NR AGT+ + V++ Y + L V P ++A +P+ +F Q DNA H DP+VVAA G
Sbjct: 12 RKNLTPSERAEVIAFLLKVSIELEPPIGAIAACSTKYECSDDQIARLWRRALQDIKSGNA-INYDSDRKGKSGRKTRLTEEFRHDLSHAIELTPFEERTDIRTLASSLGIAKSSLHDYFLAGAFRRHTTRLKPLLSDQHRADRLKFAYGFVHRGPRNTRVFDSFMNYVHLDEKWFYLKKENQRFYLGTHEEPPHLTVKNKNYIVKVMFLVAVARPRWDSKRHRIWDGKIDLWPFVVYEPAERSSKNRPAGTLELKTYNVDKDVYRQALCRMVIPSVKAVWPSGKRVFLQHDNAKPHVAADDPEVVAACSDG 321
BLAST of mRNA_P-littoralis_Contig1263.2.1 vs. uniprot
Match: A0A6G0WUP2_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WUP2_9STRA) HSP 1 Score: 194 bits (494), Expect = 3.850e-55 Identity = 113/297 (38.05%), Postives = 172/297 (57.91%), Query Frame = 1
Query: 4 KNLTPPEKRGMIAELLKGSNNGVLGHGDLKRVAAMYQQTPKTVSKYWKMYNQKKEAGEEDPDLHNKRKGNSGQKGI-DIAALKVVLQEIPLKNRTTIRSIAAALEIPTSTLFDNLK-NLGLRSCLRFLKPLLSDDGKAQRLAWALR*VRFSPGGARKFHNFFDFVHLDEKWFYICKQGQRYYCYEGEDLPVRKVQHKSHVIKVMFLAAVARPRYDSGRNRQFDGKIGIYPFTVQRAAQRNSRNRAAGTMVTHSVEVNRATYNEKLINNVFPDIRAKFPASPI-IFAQQDNAPGHRVL 885
KNL+ E+R +LL+ S G L G + A + + T+++ WK + G D +K KGNSG+K AA++ ++ + NR T+R++A IP +T+ ++K N L++ ++KP+L++D K +RL +A+ R S G+ F N + +VH+DEKW Y+ K +++Y Y+ ED+ VR V+ K + KVMFLAAVA+PRYD R FDGK+G++PF A+R +NR GT+ T VN + Y + ++ V P IR KFP + I QQDNA HR L
Sbjct: 23 KNLSDGERRADYEQLLEMSVEGELPRGAFQCAAQRFGCSRLTIARVWKRGRASIKEGLAAADTSSKIKGNSGRKCTRSSAAIEEAIKAVSHLNRQTLRTLAVKASIPKTTILRHMKQNPRLKARSNYVKPMLTEDNKLERLKFAMSFPRPSSSGSHFFDNMYSYVHVDEKWLYLTKVRRKFYVYDDEDVAVRSVKSKGFITKVMFLAAVAKPRYDYHERRMFDGKLGVWPFVESVPAKRTIKNRPKGTIETVHQSVNASVYQKTIMEKVIPAIRQKFPQNAQEIILQQDNAGPHRPL 319
BLAST of mRNA_P-littoralis_Contig1263.2.1 vs. uniprot
Match: A0A1R3HQ96_9ROSI (Transposase, Tc1-like protein n=1 Tax=Corchorus olitorius TaxID=93759 RepID=A0A1R3HQ96_9ROSI) HSP 1 Score: 192 bits (488), Expect = 1.640e-54 Identity = 118/294 (40.14%), Postives = 169/294 (57.48%), Query Frame = 1
Query: 4 KNLTPPEKRGMIAELLKGSNNGVLGHGDLKRVAAMYQQTPKTVSKYWKMYNQKKEAGEEDPDLHNKRKGNSGQKGIDIAALKVVLQEIPLKNRTTIRSIAAALEIPTSTLFDNLKNLGLRSCLRFLKPLLSDDGKAQRLAWALR*VRFSPGGARK--FHNFFDFVHLDEKWFYICKQGQRYYCYEGEDLPVRKVQHKSHVIKVMFLAAVARPRYDSGRNRQFDGKIGIYPFTVQRAAQRNSRNRAAGTMVTHSVEVNRATYNEKLINNVFPDIRAKFPAS-PIIFAQQDNAPGH 876
+NLT +++ + LLK S +GVL G L +A M+ +PKT+ + WK E G ++ +K GN G+K I I KV EIPL+ RT IRSIA AL + ST+ +K +R+ +KP L+D+ K RL + L + + G F F+ VH+DEKWF++ ++ +RYY ED PVR + K + KVMFLAAVARPR+D N +F GKIGI+PF + A+R S+NR AGTM T + V + +I + P I++K+P ++ QQDNA H
Sbjct: 16 RNLTNQQRQTIYEMLLKQSKDGVLSKGSLTSLATMFSVSPKTIGRIWKQAKLCMENGLI-VNVSSKLTGNVGRKKILIDPRKV--SEIPLRRRTNIRSIAKALNMSKSTVHRRVKEGFIRAHSNAVKPDLTDENKKTRLEFCLSKLDLTNAGINTIPFDGMFNQVHIDEKWFFMTRESERYYLLPEEDEPVRTCKSKRFITKVMFLAAVARPRFDESGNVKFSGKIGIFPFVHKEPAKRKSKNRIAGTMETKPMLVTKDVTRAYMIEKILPAIKSKWPDKMETVYIQQDNAKPH 306
BLAST of mRNA_P-littoralis_Contig1263.2.1 vs. uniprot
Match: UPI00125DF384 (uncharacterized protein LOC116015901 n=1 Tax=Ipomoea triloba TaxID=35885 RepID=UPI00125DF384) HSP 1 Score: 194 bits (493), Expect = 2.570e-54 Identity = 122/283 (43.11%), Postives = 171/283 (60.42%), Query Frame = 1
Query: 79 HGDLKRVAAMYQQTPKTVSKYWKM-YNQKKEAGEEDPDLHNKRKGNSGQKGIDIAALKVVLQEIPLKNRTTIRSIAAALEIPTSTLFDNLKNLGLRSCLRFLKPLLSDDGKAQRLAWALR*VRF-SPGGARKFHNFFDFVHLDEKWFYICKQGQRYYCYEGEDLPVRKVQHKSHVIKVMFLAAVARPRYDSGRNRQFDGKIGIYPFTVQRAAQRNSRNRAAGTMVTHSVE-VNRATYNEKLINNVFPDIRAKFP--ASPIIFAQQDNAPGHRVLADPDVVAAA 912
HG ++ VA++Y + +TVS+ WK + K D L+ GN G+K I I+ +V IPL RTTIRS+A AL + ++L +K L+S +KPLL+++ + RL + + + SP F + +D VH+DEKWF++ K Q+YY GED P R + K + KVMFL AVARPR+DSGRN FDGKIGI+PF + AA+R S+NR AGT+VT +E VN+ + LI+ V P IRAK+ +S IF QQDNA H + D + + AA
Sbjct: 11 HGAIRDVASIYSVSTRTVSRIWKKGIDCVKHGVPVDTSLN--LTGNVGRKRIQISPDEV--SRIPLNRRTTIRSMATALNMSKTSLHRRVKEGSLKSHSNAIKPLLTEENRKVRLQFCISMIDSNSPPHNPSFIDMYDRVHIDEKWFFLSKSSQKYYLLPGEDEPYRTCKSKKFIAKVMFLCAVARPRFDSGRNEMFDGKIGIFPFIYKEAAKRRSKNREAGTLVTKPIESVNKEVTRKWLIDYVLPAIRAKWSLSSSKSIFIQQDNARPHISVNDAEFLEAA 289 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1263.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1263.2.1 >prot_P-littoralis_Contig1263.2.1 ID=prot_P-littoralis_Contig1263.2.1|Name=mRNA_P-littoralis_Contig1263.2.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=135bp MIAELLKGSNNGVLGHGDLKRVAAMYQQTPKTVSKYWKMYNQKKEAGEEDback to top mRNA from alignment at P-littoralis_Contig1263:1009..2212- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig1263.2.1 ID=mRNA_P-littoralis_Contig1263.2.1|Name=mRNA_P-littoralis_Contig1263.2.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1204bp|location=Sequence derived from alignment at P-littoralis_Contig1263:1009..2212- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig1263:1009..2212- >mRNA_P-littoralis_Contig1263.2.1 ID=mRNA_P-littoralis_Contig1263.2.1|Name=mRNA_P-littoralis_Contig1263.2.1|organism=Pylaiella littoralis U1_48|type=CDS|length=405bp|location=Sequence derived from alignment at P-littoralis_Contig1263:1009..2212- (Pylaiella littoralis U1_48)back to top |